Detail Information

Basic Information:


  VIRBase ID:  

HHID00064892

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-30c-2-3p:           RNF213:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-30c-2-3p RNF213
miRBase
Accession/Entrez ID
MIMAT0004550 57674
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - ALO17//C17orf27//KIAA1618//MYMY2//MYSTR//NET57

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-30c-2-3p
rs1262929323 chr6:71376964    A/G
rs1413659455 chr6:71376968    T/C
rs1421032991 chr6:71376975    C/A
rs1421032991 chr6:71376975    C/G
rs1488181071 chr6:71376967    G/T
rs747913643 chr6:71376976    C/A
rs760276048 chr6:71376974    G/C
rs775896072 chr6:71376969    A/G

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR RNF213
chr17:78275737(+) A-I      intronic
chr17:78275742(+) A-I      intronic
chr17:78364741(+) A-I      intronic
chr17:78364731(+) A-I      intronic
chr17:78241748(+) A-I      intronic
chr17:78275734(+) A-I      intronic
chr17:78259635(+) A-I      intronic
chr17:78266072(+) A-I      intronic
chr17:78294757(+) A-I      3'UTR
chr17:78294725(+) A-I      3'UTR
chr17:78365115(+) A-I      intronic
chr17:78295543(+) A-I      intronic
chr17:78296229(+) A-I      intronic
chr17:78296022(+) A-I      intronic
chr17:78296017(+) A-I      intronic
chr17:78296000(+) A-I      intronic
chr17:78295665(+) A-I      intronic
chr17:78364708(+) A-I      intronic
chr17:78364709(+) A-I      intronic
chr17:78364715(+) A-I      intronic
chr17:78365307(+) A-I      intronic
chr17:78365293(+) A-I      intronic
chr17:78365281(+) A-I      intronic
chr17:78365232(+) A-I      intronic
chr17:78365151(+) A-I      intronic
chr17:78240855(+) A-I      intronic
chr17:78364819(+) A-I      intronic
chr17:78364798(+) A-I      intronic
chr17:78364755(+) A-I      intronic
chr17:78296288(+) A-I      intronic
chr17:78364751(+) A-I      intronic
chr17:78285765(+) A-I      intronic
chr17:78296317(+) A-I      intronic
chr17:78239635(+) A-I      intronic
chr17:78239646(+) A-I      intronic
chr17:78240031(+) A-I      intronic
chr17:78240050(+) A-I      intronic
chr17:78240226(+) A-I      intronic
chr17:78240851(+) A-I      intronic
chr17:78240854(+) A-I      intronic
chr17:78295625(+) A-I      intronic
chr17:78240856(+) A-I      intronic
chr17:78240869(+) A-I      intronic
chr17:78240896(+) A-I      intronic
chr17:78241125(+) A-I      intronic
chr17:78241162(+) A-I      intronic
chr17:78241187(+) A-I      intronic
chr17:78241693(+) A-I      intronic
chr17:78241723(+) A-I      intronic
chr17:78250146(+) A-I      intronic
chr17:78250643(+) A-I      intronic
chr17:78251250(+) A-I      intronic
chr17:78251317(+) A-I      intronic
chr17:78251318(+) A-I      intronic
chr17:78251322(+) A-I      intronic
chr17:78254327(+) A-I      intronic
chr17:78254515(+) A-I      intronic
chr17:78255773(+) A-I      intronic
chr17:78255795(+) A-I      intronic
chr17:78256291(+) A-I      intronic
chr17:78256327(+) A-I      intronic
chr17:78256337(+) A-I      intronic
chr17:78256515(+) A-I      intronic
chr17:78256614(+) A-I      intronic
chr17:78304783(+) A-I      intronic
chr17:78304828(+) A-I      intronic
chr17:78304668(+) A-I      intronic
chr17:78306988(+) A-I      intronic
chr17:78307067(+) A-I      intronic
chr17:78307338(+) A-I      intronic
chr17:78307439(+) A-I      intronic
chr17:78307446(+) A-I      intronic
chr17:78256636(+) A-I      intronic
chr17:78259506(+) A-I      intronic
chr17:78307459(+) A-I      intronic
chr17:78314658(+) A-I      intronic
chr17:78314669(+) A-I      intronic
chr17:78364326(+) A-I      intronic
chr17:78364338(+) A-I      intronic
chr17:78364394(+) A-I      intronic
chr17:78259570(+) A-I      intronic
chr17:78259573(+) A-I      intronic
chr17:78259574(+) A-I      intronic
chr17:78259631(+) A-I      intronic
chr17:78265977(+) A-I      intronic
chr17:78266045(+) A-I      intronic
chr17:78266973(+) A-I      intronic
chr17:78267032(+) A-I      intronic
chr17:78267136(+) A-I      intronic
chr17:78267547(+) A-I      intronic
chr17:78296283(+) A-I      intronic
chr17:78364465(+) A-I      intronic
chr17:78364613(+) A-I      intronic
chr17:78364648(+) A-I      intronic
chr17:78364684(+) A-I      intronic
chr17:78364700(+) A-I      intronic
chr17:78267567(+) A-I      intronic
chr17:78267576(+) A-I      intronic
chr17:78270575(+) A-I      intronic
chr17:78270997(+) A-I      intronic
chr17:78271121(+) A-I      intronic
chr17:78271292(+) A-I      intronic
chr17:78285741(+) A-I      intronic
chr17:78285740(+) A-I      intronic
chr17:78285672(+) A-I      intronic
chr17:78285655(+) A-I      intronic
chr17:78283827(+) A-I      intronic
chr17:78283739(+) A-I      intronic
chr17:78283730(+) A-I      intronic
chr17:78280531(+) A-I      intronic
chr17:78279850(+) A-I      intronic
chr17:78279830(+) A-I      intronic
chr17:78271466(+) A-I      intronic
chr17:78364706(+) A-I      intronic
chr17:78364662(+) A-I      intronic
chr17:78315525(+) A-I      intronic
chr17:78254382(+) A-I      intronic
chr17:78315391(+) A-I      intronic
chr17:78240089(+) A-I      intronic
chr17:78315526(+) A-I      intronic
chr17:78267122(+) A-I      intronic
chr17:78349355(+) A-I      intronic
chr17:78258196(+) A-I      intronic
chr17:78270611(+) A-I      intronic
chr17:78238963(+) A-I      intronic
chr17:78364704(+) A-I      intronic
chr17:78240473(+) A-I      intronic
chr17:78240523(+) A-I      intronic
chr17:78315736(+) A-I      intronic
chr17:78256680(+) A-I      intronic
chr17:78241688(+) A-I      intronic
chr17:78364711(+) A-I      intronic
chr17:78303520(+) A-I      intronic
chr17:78297389(+) A-I      intronic
chr17:78285695(+) A-I      intronic
chr17:78241119(+) A-I      intronic
chr17:78364783(+) A-I      intronic
chr17:78295709(+) A-I      intronic
chr17:78295629(+) A-I      intronic
chr17:78239687(+) A-I      intronic
chr17:78240016(+) A-I      intronic
chr17:78315808(+) A-I      intronic
chr17:78307373(+) A-I      intronic
chr17:78342989(+) A-I      intronic
chr17:78285772(+) A-I      intronic
chr17:78266896(+) A-I      intronic
chr17:78279035(+) A-I      intronic
chr17:78364697(+) A-I      intronic
chr17:78296255(+) A-I      intronic
chr17:78266936(+) A-I      intronic
chr17:78304692(+) A-I      intronic
chr17:78296038(+) A-I      intronic
chr17:78249948(+) A-I      intronic
chr17:78258146(+) A-I      intronic
chr17:78352912(+) A-I      intronic
chr17:78276398(+) A-I      intronic
chr17:78296189(+) A-I      intronic
chr17:78267505(+) A-I      intronic
chr17:78303510(+) A-I      intronic
chr17:78303447(+) A-I      intronic
chr17:78241824(+) A-I      intronic
chr17:78238894(+) A-I      intronic
chr17:78364220(+) A-I      intronic
chr17:78266023(+) A-I      intronic
chr17:78365134(+) A-I      intronic
chr17:78278263(+) A-I      intronic
chr17:78364433(+) A-I      intronic
chr17:78266058(+) A-I      intronic
chr17:78247558(+) A-I      intronic
chr17:78240484(+) A-I      intronic
chr17:78304744(+) A-I      intronic
chr17:78254394(+) A-I      intronic
chr17:78294689(+) A-I      3'UTR
chr17:78294379(+) A-I      3'UTR
chr17:78294525(+) A-I      3'UTR
chr17:78294775(+) A-I      3'UTR
chr17:78294253(+) A-I      3'UTR
chr17:78283682(+) A-I      intronic
chr17:78266931(+) A-I      intronic
chr17:78240381(+) A-I      intronic
chr17:78296100(+) A-I      intronic
chr17:78255839(+) A-I      intronic
chr17:78274447(+) A-I      intronic
chr17:78303419(+) A-I      intronic
chr17:78271156(+) A-I      intronic
chr17:78270656(+) A-I      intronic
chr17:78364362(+) A-I      intronic
chr17:78269946(+) A-I      intronic
chr17:78315399(+) A-I      intronic
chr17:78315638(+) A-I      intronic
chr17:78272734(+) A-I      intronic
chr17:78259743(+) A-I      intronic
chr17:78342372(+) A-I      intronic
chr17:78241808(+) A-I      intronic
chr17:78283575(+) A-I      intronic
chr17:78240510(+) A-I      intronic
chr17:78295700(+) A-I      intronic
chr17:78365210(+) A-I      intronic
chr17:78277443(+) A-I      intronic
chr17:78364719(+) A-I      intronic
chr17:78241712(+) A-I      intronic
chr17:78304698(+) A-I      intronic
chr17:78259654(+) A-I      intronic
chr17:78285877(+) A-I      intronic
chr17:78274393(+) A-I      intronic
chr17:78295626(+) A-I      intronic
chr17:78241087(+) A-I      intronic
chr17:78279603(+) A-I      intronic
chr17:78271653(+) A-I      intronic
chr17:78274614(+) A-I      intronic
chr17:78352745(+) A-I      intronic
chr17:78303367(+) A-I      intronic
chr17:78283574(+) A-I      intronic
chr17:78254392(+) A-I      intronic
chr17:78301065(+) A-I      intronic
chr17:78277622(+) A-I      intronic
chr17:78283695(+) A-I      intronic
chr17:78279032(+) A-I      intronic
chr17:78241855(+) A-I      intronic
chr17:78307440(+) A-I      intronic
chr17:78306978(+) A-I      intronic
chr17:78271099(+) A-I      intronic
chr17:78240133(+) A-I      intronic
chr17:78283836(+) A-I      intronic
chr17:78365200(+) A-I      intronic
chr17:78240101(+) A-I      intronic
chr17:78295563(+) A-I      intronic
chr17:78283761(+) A-I      intronic
chr17:78239985(+) A-I      intronic
chr17:78294196(+) A-I      3'UTR
chr17:78284315(+) A-I      intronic
chr17:78239636(+) A-I      intronic
chr17:78283753(+) A-I      intronic
chr17:78283736(+) A-I      intronic
chr17:78265948(+) A-I      intronic
chr17:78241129(+) A-I      intronic
chr17:78267135(+) A-I      intronic
chr17:78241093(+) A-I      intronic
chr17:78305318(+) A-I      intronic
chr17:78294544(+) A-I      3'UTR
chr17:78294370(+) A-I      3'UTR
chr17:78294721(+) A-I      3'UTR
chr17:78294573(+) A-I      3'UTR
chr17:78270088(+) A-I      intronic
chr17:78266901(+) A-I      intronic
chr17:78307238(+) A-I      intronic
chr17:78294742(+) A-I      3'UTR
chr17:78278255(+) A-I      intronic
chr17:78294464(+) A-I      3'UTR
chr17:78240481(+) A-I      intronic
chr17:78285775(+) A-I      intronic
chr17:78294596(+) A-I      3'UTR
chr17:78283660(+) A-I      intronic
chr17:78303395(+) A-I      intronic
chr17:78283835(+) A-I      intronic
chr17:78269913(+) A-I      intronic
chr17:78294543(+) A-I      3'UTR
chr17:78284189(+) A-I      intronic
chr17:78294732(+) A-I      3'UTR
chr17:78294390(+) A-I      3'UTR
chr17:78296102(+) A-I      intronic
chr17:78294593(+) A-I      3'UTR
chr17:78269937(+) A-I      intronic
chr17:78250590(+) A-I      intronic
chr17:78294270(+) A-I      3'UTR
chr17:78265937(+) A-I      intronic
chr17:78294183(+) A-I      3'UTR
chr17:78294774(+) A-I      3'UTR
chr17:78259651(+) A-I      intronic
chr17:78249660(+) A-I      intronic
chr17:78285843(+) A-I      intronic
chr17:78342332(+) A-I      intronic
chr17:78365212(+) A-I      intronic
chr17:78250029(+) A-I      intronic
chr17:78283697(+) A-I      intronic
chr17:78305258(+) A-I      intronic
chr17:78279819(+) A-I      intronic
chr17:78307222(+) A-I      intronic
chr17:78266001(+) A-I      intronic
chr17:78342294(+) A-I      intronic
chr17:78295630(+) A-I      intronic
chr17:78285778(+) A-I      intronic
chr17:78296364(+) A-I      intronic
chr17:78250664(+) A-I      intronic
chr17:78269906(+) A-I      intronic
chr17:78303484(+) A-I      intronic
chr17:78285807(+) A-I      intronic
chr17:78266934(+) A-I      intronic
chr17:78364643(+) A-I      intronic
chr17:78305372(+) A-I      intronic
chr17:78275713(+) A-I      intronic
chr17:78275417(+) A-I      intronic
chr17:78278257(+) A-I      intronic
chr17:78271089(+) A-I      intronic
chr17:78275312(+) A-I      intronic
chr17:78240895(+) A-I      intronic
chr17:78296291(+) A-I      intronic
chr17:78239587(+) A-I      intronic
chr17:78315754(+) A-I      intronic
chr17:78285781(+) A-I      intronic
chr17:78275364(+) A-I      intronic
chr17:78255894(+) A-I      intronic
chr17:78240466(+) A-I      intronic
chr17:78296326(+) A-I      intronic
chr17:78266013(+) A-I      intronic
chr17:78249646(+) A-I      intronic
chr17:78241792(+) A-I      intronic
chr17:78267100(+) A-I      intronic
chr17:78276427(+) A-I      intronic
chr17:78249672(+) A-I      intronic
chr17:78241236(+) A-I      intronic
chr17:78240787(+) A-I      intronic
chr17:78296358(+) A-I      intronic
chr17:78250709(+) A-I      intronic
chr17:78364782(+) A-I      intronic
chr17:78263378(+) A-I      intronic
chr17:78315464(+) A-I      intronic
chr17:78315513(+) A-I      intronic
chr17:78364701(+) A-I      intronic
chr17:78269924(+) A-I      intronic
chr17:78296219(+) A-I      intronic
chr17:78271097(+) A-I      intronic
chr17:78303396(+) A-I      intronic
chr17:78284620(+) A-I      intronic
chr17:78285808(+) A-I      intronic
chr17:78315458(+) A-I      intronic
chr17:78250674(+) A-I      intronic
chr17:78279851(+) A-I      intronic
chr17:78275712(+) A-I      intronic
chr17:78293274(+) A-I      Syn:Glu->Glu
chr17:78266064(+) A-I      intronic
chr17:78364363(+) A-I      intronic
chr17:78303451(+) A-I      intronic
chr17:78270594(+) A-I      intronic
chr17:78283721(+) A-I      intronic
chr17:78250736(+) A-I      intronic
chr17:78237219(+) A-I      intronic
chr17:78241063(+) A-I      intronic
chr17:78270660(+) A-I      intronic
chr17:78255929(+) A-I      intronic
chr17:78364686(+) A-I      intronic
chr17:78267123(+) A-I      intronic
chr17:78240128(+) A-I      intronic
chr17:78365135(+) A-I      intronic
chr17:78267575(+) A-I      intronic
chr17:78364661(+) A-I      intronic
chr17:78283673(+) A-I      intronic
chr17:78342337(+) A-I      intronic
chr17:78285671(+) A-I      intronic
chr17:78271130(+) A-I      intronic
chr17:78364290(+) A-I      intronic
chr17:78314636(+) A-I      intronic
chr17:78254370(+) A-I      intronic
chr17:78364336(+) A-I      intronic
chr17:78267515(+) A-I      intronic
chr17:78285658(+) A-I      intronic
chr17:78277570(+) A-I      intronic
chr17:78238915(+) A-I      intronic
chr17:78240440(+) A-I      intronic
chr17:78363025(+) A-I      NonSyn:Tyr->Cys
chr17:78240051(+) A-I      intronic
chr17:78342999(+) A-I      intronic
chr17:78294459(+) A-I      3'UTR
chr17:78294547(+) A-I      3'UTR
chr17:78294758(+) A-I      3'UTR
chr17:78293418(+) A-I      3'UTR
chr17:78294209(+) A-I      3'UTR
chr17:78294712(+) A-I      3'UTR
chr17:78294728(+) A-I      3'UTR
chr17:78294739(+) A-I      3'UTR
chr17:78294621(+) A-I      3'UTR
chr17:78294171(+) A-I      3'UTR
chr17:78294579(+) A-I      3'UTR
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED RNF213
chr17:78261805(+) A-I exon CDS    15342557
chr17:78293274(+) A-I exon CDS    15342557
chr17:78293418(+) A-I exon 3'UTR    15342557
chr17:78294171(+) A-I exon 3'UTR    15342557   //15258596
chr17:78294183(+) A-I exon 3'UTR    15342557   //15258596   //21960545
chr17:78294196(+) A-I exon 3'UTR    15342557   //15258596
chr17:78294209(+) A-I exon 3'UTR    15342557   //15258596   //21960545
chr17:78294253(+) A-I exon 3'UTR    15342557   //15258596   //21960545   //22327324
chr17:78294270(+) A-I exon 3'UTR    15342557   //15258596
chr17:78294464(+) A-I exon 3'UTR    15342557   //15258596
chr17:78294544(+) A-I exon 3'UTR    15342557   //15258596
chr17:78294689(+) A-I exon 3'UTR    15342557   //15258596   //22327324
chr17:78294728(+) A-I exon 3'UTR    15342557   //15258596   //22327324
chr17:78294732(+) A-I exon 3'UTR    15342557
chr17:78294739(+) A-I exon 3'UTR    15342557
chr17:78294742(+) A-I exon 3'UTR    15342557   //15258596   //21960545   //22327324
chr17:78294758(+) A-I exon 3'UTR    15342557   //21960545
chr17:78294774(+) A-I exon 3'UTR    15342557
chr17:78294775(+) A-I exon 3'UTR    15342557   //22327324
chr17:78315458(+) A-I intron -    15342557
chr17:78315464(+) A-I intron -    15342557
chr17:78315638(+) A-I intron -    15342557
chr17:78315736(+) A-I intron -    15342557
chr17:78315754(+) A-I intron -    15342557
chr17:78315808(+) A-I intron -    15342557
chr17:78305372(+) A-I intron -    22327324
chr17:78352745(+) A-I intron -    22327324
chr17:78352912(+) A-I intron -    22327324
chr17:78266013(+) A-I intron -    21960545
chr17:78266064(+) A-I intron -    21960545
chr17:78267135(+) A-I intron -    21960545
chr17:78270506(+) A-I intron -    21960545
chr17:78273973(+) A-I intron -    21960545
chr17:78275103(+) A-I intron -    21960545
chr17:78275156(+) A-I intron -    21960545
chr17:78275312(+) A-I intron -    21960545
chr17:78275321(+) A-I intron -    21960545
chr17:78275324(+) A-I intron -    21960545
chr17:78275364(+) A-I intron -    21960545
chr17:78275713(+) A-I intron -    21960545
chr17:78294525(+) A-I intron -    21960545
chr17:78294543(+) A-I intron -    21960545
chr17:78294209(+) A-G intron -    21725310
chr17:78294253(+) A-G intron -    21725310   //22484847
chr17:78294464(+) A-G intron -    21725310   //22484847
chr17:78294742(+) A-G intron -    21725310   //22484847
chr17:78275312(+) A-G intron -    22484847
chr17:78240016(+) A-G intron -    22484847
chr17:78241119(+) A-G intron -    22484847
chr17:78250674(+) A-G intron -    22484847
chr17:78266058(+) A-G intron -    22484847
chr17:78267505(+) A-G intron -    22484847
chr17:78277443(+) A-G intron -    22484847
chr17:78285807(+) A-G intron -    22484847
chr17:78285808(+) A-G intron -    22484847
chr17:78285877(+) A-G intron -    22484847
chr17:78294689(+) A-G intron -    22484847
chr17:78294712(+) A-G intron -    22484847
chr17:78294728(+) A-G intron -    22484847
chr17:78294732(+) A-G intron -    22484847
chr17:78294774(+) A-G intron -    22484847
chr17:78294775(+) A-G intron -    22484847
chr17:78296102(+) A-G intron -    22484847
chr17:78305372(+) A-G intron -    22484847
chr17:78310709(+) G-A intron -    22484847
chr17:78315638(+) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase RNF213
chr17:78237380-78237381(+) m6A 5'UTR       24284625//24981863//22575960
chr17:78237405-78237406(+) m6A 5'UTR       24284625//24981863//22575960
chr17:78237476-78237477(+) m6A 5'UTR       24284625//22575960
chr17:78237519-78237520(+) m6A CDS       24284625//22575960
chr17:78247048-78247049(+) m6A CDS       24284625
chr17:78247144-78247145(+) m6A CDS       24284625//24981863
chr17:78247159-78247160(+) m6A CDS       24284625//24981863
chr17:78247191-78247192(+) m6A CDS       24284625//24981863
chr17:78252599-78252600(+) m6A CDS//intron       24284625//24981863
chr17:78252698-78252699(+) m6A CDS//intron       24284625
chr17:78261634-78261635(+) m1A CDS       26863196
chr17:78261650-78261651(+) m6A CDS       24284625//24981863
chr17:78261725-78261726(+) m6A CDS       24284625//25456834//24981863//22575960
chr17:78261740-78261741(+) m6A CDS       24284625//25456834//24981863//22575960
chr17:78261944-78261945(+) m6A CDS//exon       24284625//25456834//24981863//22575960//22608085
chr17:78261962-78261963(+) m6A CDS//exon       24284625//25456834//24981863//22575960//22608085
chr17:78262012-78262013(+) m6A CDS//exon       24284625//25456834//24981863//22608085
chr17:78262051-78262052(+) m6A CDS//exon       24284625//25456834//24981863
chr17:78262114-78262115(+) m6A CDS//exon       24284625//24981863
chr17:78262119-78262120(+) m6A CDS//exon       24284625//24981863
chr17:78262126-78262127(+) m6A CDS//exon       24284625//24981863
chr17:78262497-78262498(+) m6A CDS//exon       24284625//24209618//24981863//27773535//22575960
chr17:78262511-78262512(+) m6A CDS//exon       24284625//24209618//24981863//27773535//22575960
chr17:78262542-78262543(+) m6A CDS//exon       24284625//24209618//24981863//27773535//22575960
chr17:78263466-78263467(+) m6A CDS//exon       24284625//24209618//24981863//27773535//22575960
chr17:78263472-78263473(+) m6A CDS//exon       24284625//24209618//24981863//27773535//22575960
chr17:78263519-78263520(+) m6A CDS//exon       24284625//24209618//24981863//27773535//22575960
chr17:78263536-78263537(+) m6A CDS//exon       24284625//24209618//24981863//27773535//22575960
chr17:78263560-78263561(+) m6A CDS//exon       24284625//24209618//24981863//27773535//22575960
chr17:78263602-78263603(+) m6A CDS//exon       24284625//24209618//24981863//22575960
chr17:78268650-78268651(+) m6A CDS//exon       24284625
chr17:78268673-78268674(+) m6A CDS//exon       24284625
chr17:78268680-78268681(+) m6A CDS//exon       24284625
chr17:78268695-78268696(+) m6A CDS//exon       24284625
chr17:78268759-78268760(+) m6A CDS//exon       24284625//24981863//22608085
chr17:78268775-78268776(+) m6A CDS//exon       24284625//24981863//22608085
chr17:78269388-78269389(+) m6A CDS//exon       24284625//24209618//24981863//22608085
chr17:78269423-78269424(+) m6A CDS//exon       24284625//24209618//24981863//22575960//22608085
chr17:78269438-78269439(+) m6A CDS//exon       24284625//24209618//24981863//22575960//22608085
chr17:78269457-78269458(+) m6A CDS//exon       24284625//24209618//24981863//22575960//22608085
chr17:78269464-78269465(+) m6A CDS//exon       24284625//24209618//24981863//22575960//22608085
chr17:78269525-78269526(+) m6A CDS//exon       24284625//24981863//22575960//22608085
chr17:78272140-78272141(+) m6A CDS//exon       24284625//22575960
chr17:78272161-78272162(+) m6A CDS//exon       24284625//22575960
chr17:78272246-78272247(+) m6A CDS//exon       24284625//22575960
chr17:78272257-78272258(+) m6A CDS//exon       24284625//22575960
chr17:78272279-78272280(+) m6A CDS//exon       24284625
chr17:78291054-78291055(+) m6A CDS//exon       24284625//24209618//24981863//22575960
chr17:78292994-78292995(+) m6A CDS//exon       24284625//24209618//24981863//22575960
chr17:78293035-78293036(+) m6A CDS//exon       24284625//24209618//24981863//22575960
chr17:78293053-78293054(+) m6A CDS//exon       24284625//24209618//24981863//22575960
chr17:78293067-78293068(+) m6A CDS//exon       24284625//24209618//24981863//22575960
chr17:78293116-78293117(+) m6A CDS//intron       24284625//24209618//24981863//22608085
chr17:78293478-78293479(+) m6A 3'UTR//intron       24284625//24209618//24981863//22575960//22608085
chr17:78293496-78293497(+) m6A 3'UTR//intron       24284625//24209618//24981863//22575960//22608085
chr17:78293595-78293596(+) m6A 3'UTR//intron       24284625//24209618//24981863//22575960//22608085
chr17:78293669-78293670(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22608085
chr17:78293721-78293722(+) m6A 3'UTR//intron       24284625//24209618//24981863//22608085
chr17:78293746-78293747(+) m6A 3'UTR//intron       24209618//24981863
chr17:78293952-78293953(+) m6A 3'UTR//intron       24981863
chr17:78294015-78294016(+) m6A 3'UTR//intron       24981863
chr17:78294026-78294027(+) m6A 3'UTR//intron       24981863
chr17:78294032-78294033(+) m6A 3'UTR//intron       24981863
chr17:78302155-78302156(+) m6A CDS//exon       24981863
chr17:78302197-78302198(+) m6A CDS//exon       24981863
chr17:78302263-78302264(+) m6A CDS//exon       24284625//24981863//22608085
chr17:78305808-78305809(+) m6A CDS//exon       24284625//24981863//22575960//22608085
chr17:78305830-78305831(+) m6A CDS//exon       24284625//24981863//22575960//22608085
chr17:78305841-78305842(+) m6A CDS//exon       24284625//24981863//22575960//22608085
chr17:78305881-78305882(+) m6A CDS//exon       24284625//24981863//26404942//22575960//22608085
chr17:78305898-78305899(+) m6A CDS//exon       24284625//24981863//26404942//22575960//22608085
chr17:78305961-78305962(+) m6A CDS//exon       24284625//25456834//24981863//22575960//22608085
chr17:78305973-78305974(+) m6A CDS//exon       24284625//25456834//24981863//22575960//22608085
chr17:78306036-78306037(+) m6A CDS//exon       24284625//25456834//24981863//22575960//22608085
chr17:78306213-78306214(+) m6A CDS//exon       24284625//24209618//24981863//26404942//22575960//22608085
chr17:78306234-78306235(+) m6A CDS//exon       24284625//24209618//24981863//26404942//22575960//22608085
chr17:78306247-78306248(+) m6A CDS//exon       24284625//24209618//24981863//26404942//22575960//22608085
chr17:78306251-78306252(+) Am CDS//exon       -
chr17:78306270-78306271(+) m6A CDS//exon       24284625//24209618//24981863//26404942//22575960//22608085
chr17:78306279-78306280(+) m6A CDS//exon       24284625//24981863//26404942//22575960//22608085
chr17:78306300-78306301(+) m6A CDS//exon       24284625//24981863//26404942//22575960//22608085
chr17:78306310-78306311(+) m6A CDS//exon       24284625//24981863//26404942//22575960//22608085
chr17:78306388-78306389(+) m6A CDS//exon       24284625//24981863//22575960
chr17:78307934-78307935(+) m6A CDS//exon       -
chr17:78307941-78307942(+) m6A CDS//exon       -
chr17:78307943-78307944(+) Cm CDS//exon       -
chr17:78309987-78309988(+) m6A CDS//exon       22575960
chr17:78313127-78313128(+) m6A CDS//exon       24284625//25456834//24981863//22575960//22608085
chr17:78313139-78313140(+) m6A CDS//exon       24284625//25456834//24981863//22575960//22608085
chr17:78313271-78313272(+) m6A CDS       24284625//25456834//24981863//22575960//22608085
chr17:78313493-78313494(+) m6A CDS       24284625//25456834//24981863//22575960//22608085
chr17:78313567-78313568(+) m6A CDS       24284625//25456834//24981863//22575960
chr17:78313717-78313718(+) m6A CDS       24284625//22575960
chr17:78313934-78313935(+) m6A CDS       24284625//24981863//22575960
chr17:78313964-78313965(+) m6A CDS       24284625//24981863//22575960
chr17:78318553-78318554(+) m6A CDS       24284625//24981863//22608085
chr17:78318621-78318622(+) m6A CDS       24284625//24981863//26404942//22608085
chr17:78318632-78318633(+) m6A CDS       24284625//24981863//26404942//22608085
chr17:78318664-78318665(+) m6A CDS       24284625//24981863//26404942//22575960//22608085
chr17:78318670-78318671(+) m6A CDS       24284625//24981863//26404942//22575960//22608085
chr17:78318676-78318677(+) m6A CDS       24284625//24981863//22575960//22608085
chr17:78318760-78318761(+) m6A CDS       24284625//24981863//22608085
chr17:78318784-78318785(+) m6A CDS       24284625//24981863//22608085
chr17:78319180-78319181(+) m6A CDS       24284625//24981863//26404942//22608085
chr17:78319235-78319236(+) m6A CDS       24284625//24981863//26404942//22608085
chr17:78319244-78319245(+) m6A CDS       24284625//24981863//26404942//22608085
chr17:78319253-78319254(+) m6A CDS       24284625//24981863//26404942//22608085
chr17:78319398-78319399(+) m6A CDS       24284625//22575960//22608085
chr17:78319413-78319414(+) m6A CDS       24284625//22575960//22608085
chr17:78319497-78319498(+) m6A CDS       24284625//24981863//22575960//22608085
chr17:78319507-78319508(+) m6A CDS       24284625//24981863//22575960//22608085
chr17:78319561-78319562(+) m6A CDS       24284625//24981863//26404942//22575960//22608085
chr17:78319576-78319577(+) m6A CDS       24284625//24981863//26404942//22575960//22608085
chr17:78319678-78319679(+) m6A CDS       24284625//24981863//26404942//22575960
chr17:78319876-78319877(+) m6A CDS       24284625//25456834//24981863//26404942//22575960//22608085
chr17:78319883-78319884(+) m6A CDS       24284625//25456834//24981863//26404942//22575960//22608085
chr17:78319934-78319935(+) m6A CDS       24284625//25456834//24981863//26404942//22575960//22608085
chr17:78319968-78319969(+) m6A CDS       24284625//25456834//24981863//26404942//22575960//22608085
chr17:78320019-78320020(+) m6A CDS       24284625//25456834//24981863//26404942//22575960//22608085
chr17:78320236-78320237(+) m6A CDS       24981863//26404942
chr17:78320239-78320240(+) Cm CDS       -
chr17:78320273-78320274(+) m6A CDS       24981863//26404942
chr17:78320472-78320473(+) m6A CDS       24284625
chr17:78320632-78320633(+) m6A CDS       24284625//22608085
chr17:78320686-78320687(+) m6A CDS       24284625//22608085
chr17:78320709-78320710(+) m6A CDS       24284625//22608085
chr17:78320818-78320819(+) m6A CDS       24284625
chr17:78320856-78320857(+) m6A CDS       24284625
chr17:78320896-78320897(+) m6A CDS       24284625//22575960//22608085
chr17:78320911-78320912(+) m6A CDS       24284625//22575960//22608085
chr17:78320974-78320975(+) m6A CDS       24284625//22575960//22608085
chr17:78321067-78321068(+) m6A CDS       24284625//24981863//22575960//22608085
chr17:78321091-78321092(+) m6A CDS       24284625//24981863//22575960//22608085
chr17:78321124-78321125(+) m6A CDS       24284625//24981863//22575960//22608085
chr17:78321191-78321192(+) m6A CDS       24284625//24981863//22575960//22608085
chr17:78321196-78321197(+) m6A CDS       24284625//24981863//22575960//22608085
chr17:78321277-78321278(+) m6A CDS       24284625//24981863//22575960//22608085
chr17:78321306-78321307(+) m6A CDS       24284625//24981863//22575960//22608085
chr17:78321322-78321323(+) m6A CDS       24981863
chr17:78321869-78321870(+) m6A CDS       24284625//25456834//24981863//22575960//22608085
chr17:78321913-78321914(+) m6A CDS       24284625//25456834//24981863//22575960//22608085
chr17:78322004-78322005(+) m6A CDS       24284625//25456834//24981863//22575960//22608085
chr17:78322057-78322058(+) m6A CDS       24284625//25456834//24981863//22575960//22608085
chr17:78326847-78326848(+) m6A CDS       25456834//24981863//22575960
chr17:78327321-78327322(+) m6A CDS       25456834//24981863//22575960
chr17:78327412-78327413(+) m6A CDS       24284625//25456834//24981863//27371828//22575960
chr17:78327442-78327443(+) m6A CDS       24284625//25456834//24981863//22575960
chr17:78327450-78327451(+) m6A CDS       25456834//24981863//22575960
chr17:78327831-78327832(+) m6A CDS       22575960
chr17:78327885-78327886(+) m6A CDS       -
chr17:78337408-78337409(+) m6A CDS//exon       22608085
chr17:78337457-78337458(+) m6A CDS//exon       22608085
chr17:78338791-78338792(+) m6A exon//intron       24284625
chr17:78338799-78338800(+) m6A exon//intron       24284625
chr17:78338871-78338872(+) m6A exon//intron       24284625
chr17:78338942-78338943(+) m6A exon//intron       24284625
chr17:78339120-78339121(+) m6A exon//intron       24284625
chr17:78339135-78339136(+) m6A exon//intron       24284625
chr17:78353550-78353551(+) m6A exon//intron       27773535
chr17:78354632-78354633(+) m6A CDS//exon       27773535
chr17:78354641-78354642(+) m6A CDS//exon       27773535
chr17:78354652-78354653(+) m6A CDS//exon       27773535
chr17:78355661-78355662(+) m6A exon//intron       -
chr17:78355676-78355677(+) m6A exon//intron       -
chr17:78356271-78356272(+) m6A exon//intron       27773535
chr17:78356301-78356302(+) m6A exon//intron       27773535
chr17:78359401-78359402(+) Gm CDS//exon       -
chr17:78360519-78360520(+) m6A CDS//exon       22575960
chr17:78360551-78360552(+) m6A CDS//exon       22575960
chr17:78360607-78360608(+) m6A CDS//exon       22575960
chr17:78362475-78362476(+) m6A CDS//exon       22608085
chr17:78362502-78362503(+) m6A exon//intron       24981863//22608085
chr17:78362634-78362635(+) m6A exon//intron       24981863//27773535//22608085
chr17:78362749-78362750(+) m6A exon//intron       24981863//22608085
chr17:78362792-78362793(+) m6A exon//intron       22608085
chr17:78362819-78362820(+) m6A exon//intron       24284625//22608085
chr17:78362930-78362931(+) m6A exon//intron       24284625//22608085
chr17:78362943-78362944(+) m6A exon//intron       24284625//22608085
chr17:78362973-78362974(+) m6A CDS//exon       24284625//22608085
chr17:78363010-78363011(+) m6A CDS//exon       24284625
chr17:78363895-78363896(+) m6A CDS//exon       24284625
chr17:78363945-78363946(+) m6A CDS//exon       24284625
chr17:78363953-78363954(+) m6A CDS//exon       24284625
chr17:78363961-78363962(+) m6A CDS//exon       24284625
chr17:78363967-78363968(+) m6A CDS//exon       24284625
chr17:78367152-78367153(+) m6A CDS//exon       24284625
chr17:78367175-78367176(+) m6A CDS//exon       24284625
chr17:78367259-78367260(+) m6A CDS//exon       24284625//24981863//26404942//22575960
chr17:78367339-78367340(+) m6A 3'UTR//exon       24284625//25456834//24981863//26404942//22575960//22608085
chr17:78367366-78367367(+) m6A 3'UTR//exon       24284625//25456834//24981863//26404942//22575960//22608085
chr17:78367378-78367379(+) m6A 3'UTR//exon       24284625//25456834//24981863//26404942//22575960//22608085
chr17:78367395-78367396(+) Cm 3'UTR//exon       -
chr17:78367431-78367432(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr17:78367484-78367485(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr17:78367507-78367508(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr17:78367577-78367578(+) m6A 3'UTR//exon       24284625//24981863//22575960//22608085
chr17:78367602-78367603(+) m6A 3'UTR//exon       24284625//24981863//22575960//22608085
chr17:78367788-78367789(+) m6A 3'UTR//exon       24284625//24981863//26404942//22575960//22608085
chr17:78367796-78367797(+) m6A 3'UTR//exon       24284625//24981863//26404942//22575960//22608085
chr17:78367820-78367821(+) m6A 3'UTR//exon       24284625//24981863//26404942//22575960//22608085
chr17:78367861-78367862(+) m6A 3'UTR//exon       24284625//25456834//24981863//26404942//22575960//22608085
chr17:78367951-78367952(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr17:78367957-78367958(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr17:78367964-78367965(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr17:78368059-78368060(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr17:78368074-78368075(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr17:78368111-78368112(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr17:78368138-78368139(+) m6A 3'UTR//exon       24284625//25456834//24981863//22575960//22608085
chr17:78368203-78368204(+) m6A 3'UTR//exon       24284625//24981863//22575960//22608085
chr17:78368211-78368212(+) m6A 3'UTR//exon       24284625//24209618//24981863//22575960//22608085
chr17:78368217-78368218(+) m6A 3'UTR//exon       24284625//24209618//24981863//22575960//22608085
chr17:78368235-78368236(+) m6A 3'UTR//exon       24284625//24209618//24981863//22575960//22608085
chr17:78368346-78368347(+) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//22575960//22608085
chr17:78368356-78368357(+) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//22575960//22608085
chr17:78368374-78368375(+) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//22575960//22608085
chr17:78368473-78368474(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr17:78368502-78368503(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr17:78368550-78368551(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr17:78368615-78368616(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr17:78368684-78368685(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr17:78368835-78368836(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960
chr17:78369111-78369112(+) m6A 3'UTR//exon       24284625
chr17:78369153-78369154(+) m6A 3'UTR//exon       24284625
chr17:78369233-78369234(+) m6A 3'UTR//exon       24284625//25456834//24981863
chr17:78369249-78369250(+) m6A 3'UTR//exon       24284625//25456834//24981863
chr17:78369280-78369281(+) m6A 3'UTR//exon       24284625//25456834//24981863//22575960
chr17:78369293-78369294(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960
chr17:78369359-78369360(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr17:78369425-78369426(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960
chr17:78369507-78369508(+) m6A 3'UTR//exon       24284625//25456834//24981863
chr17:78369569-78369570(+) m6A 3'UTR//exon       24284625//24981863
chr17:78369614-78369615(+) m6A 3'UTR//exon       24284625
chr17:78369628-78369629(+) m6A 3'UTR//exon       24284625
chr17:78369669-78369670(+) m6A 3'UTR//exon       24284625//24981863
chr17:78369808-78369809(+) m6A 3'UTR//exon       24284625//24981863
chr17:78369907-78369908(+) m6A 3'UTR//exon       24284625//24981863
chr17:78371585-78371586(+) Y 3'UTR       26075521

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-30c-2-3p
Exosome B cell line (Raji)|Jurkat-derived T cell line (J77cl20)     21505438
Exosome Plasma     23663360
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Seminal plasma     23539611
Microvesicle Serum     24797360
Microvesicle Fibroblasts|Mesenchymal stem cells     -
Mitochondrion Cell line (HEK-293|HeLa)     22984580
RNF213
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HCC cell line (HepG2)     -
Exosome Blood     -
Insoluble cytoplasm HCC cell line (HepG2)     -
Membrane HCC cell line (HepG2)|K562 cells     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus Colon cancer cells     24393600
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Related Drug Information:


Resource Symbol Drug Name PubChem
ID
Function Link  
RNAInter hsa-miR-30c-2-3p
Gemcitabine 60750 Drug interaction    RC00006870
Eloxatine 5310940 Drug interaction    RC00006871
5-Fluorouracil 3385 Drug interaction    RC00006869
Resource Symbol Drug Name PubChem ID PMID
NoncoRNA hsa-miR-30c-2-3p

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-30c-2-3p
Interactor2: RNF213

Evidence Support:


Weak-Evidence PAR-CLIP
Support Database ViRBase

References:


PMID 22291592 Target region 3'UTR
Source ViRBase Interactor1 expression None
Tissue or cell line EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells Interactor2 expression None
Description We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.

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