Detail Information

Basic Information:


  VIRBase ID:  

HHID00064884

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-30c-2-3p:           ARL15:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-30c-2-3p ARL15
miRBase
Accession/Entrez ID
MIMAT0004550 54622
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - ARFRP2

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-30c-2-3p
rs1262929323 chr6:71376964    A/G
rs1413659455 chr6:71376968    T/C
rs1421032991 chr6:71376975    C/A
rs1421032991 chr6:71376975    C/G
rs1488181071 chr6:71376967    G/T
rs747913643 chr6:71376976    C/A
rs760276048 chr6:71376974    G/C
rs775896072 chr6:71376969    A/G

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ARL15
chr5:53330745(-) A-I      intronic
chr5:53339765(-) A-I      intronic
chr5:53340185(-) A-I      intronic
chr5:53340211(-) A-I      intronic
chr5:53340348(-) A-I      intronic
chr5:53342045(-) A-I      intronic
chr5:53342046(-) A-I      intronic
chr5:53342054(-) A-I      intronic
chr5:53342145(-) A-I      intronic
chr5:53342216(-) A-I      intronic
chr5:53342228(-) A-I      intronic
chr5:53342229(-) A-I      intronic
chr5:53345131(-) A-I      intronic
chr5:53348981(-) A-I      intronic
chr5:53351253(-) A-I      intronic
chr5:53351328(-) A-I      intronic
chr5:53351329(-) A-I      intronic
chr5:53351337(-) A-I      intronic
chr5:53351399(-) A-I      intronic
chr5:53352245(-) A-I      intronic
chr5:53352374(-) A-I      intronic
chr5:53352377(-) A-I      intronic
chr5:53352456(-) A-I      intronic
chr5:53353676(-) A-I      intronic
chr5:53353995(-) A-I      intronic
chr5:53354009(-) A-I      intronic
chr5:53354131(-) A-I      intronic
chr5:53356030(-) A-I      intronic
chr5:53356173(-) A-I      intronic
chr5:53356221(-) A-I      intronic
chr5:53361348(-) A-I      intronic
chr5:53361414(-) A-I      intronic
chr5:53365253(-) A-I      intronic
chr5:53365257(-) A-I      intronic
chr5:53365338(-) A-I      intronic
chr5:53365369(-) A-I      intronic
chr5:53365506(-) A-I      intronic
chr5:53365570(-) A-I      intronic
chr5:53365687(-) A-I      intronic
chr5:53365698(-) A-I      intronic
chr5:53365699(-) A-I      intronic
chr5:53365720(-) A-I      intronic
chr5:53366033(-) A-I      intronic
chr5:53366055(-) A-I      intronic
chr5:53366074(-) A-I      intronic
chr5:53366100(-) A-I      intronic
chr5:53366110(-) A-I      intronic
chr5:53366146(-) A-I      intronic
chr5:53366782(-) A-I      intronic
chr5:53366827(-) A-I      intronic
chr5:53366917(-) A-I      intronic
chr5:53367588(-) A-I      intronic
chr5:53367612(-) A-I      intronic
chr5:53367717(-) A-I      intronic
chr5:53367727(-) A-I      intronic
chr5:53367734(-) A-I      intronic
chr5:53367746(-) A-I      intronic
chr5:53367756(-) A-I      intronic
chr5:53371384(-) A-I      intronic
chr5:53371432(-) A-I      intronic
chr5:53371510(-) A-I      intronic
chr5:53371589(-) A-I      intronic
chr5:53371596(-) A-I      intronic
chr5:53372079(-) A-I      intronic
chr5:53372129(-) A-I      intronic
chr5:53372139(-) A-I      intronic
chr5:53372164(-) A-I      intronic
chr5:53372199(-) A-I      intronic
chr5:53375761(-) A-I      intronic
chr5:53377772(-) A-I      intronic
chr5:53377799(-) A-I      intronic
chr5:53377835(-) A-I      intronic
chr5:53377887(-) A-I      intronic
chr5:53381812(-) A-I      intronic
chr5:53381869(-) A-I      intronic
chr5:53381873(-) A-I      intronic
chr5:53381882(-) A-I      intronic
chr5:53381883(-) A-I      intronic
chr5:53381909(-) A-I      intronic
chr5:53381912(-) A-I      intronic
chr5:53381917(-) A-I      intronic
chr5:53382937(-) A-I      intronic
chr5:53383039(-) A-I      intronic
chr5:53383644(-) A-I      intronic
chr5:53383662(-) A-I      intronic
chr5:53383710(-) A-I      intronic
chr5:53383795(-) A-I      intronic
chr5:53392312(-) A-I      intronic
chr5:53392343(-) A-I      intronic
chr5:53392365(-) A-I      intronic
chr5:53392378(-) A-I      intronic
chr5:53392379(-) A-I      intronic
chr5:53392405(-) A-I      intronic
chr5:53392419(-) A-I      intronic
chr5:53392420(-) A-I      intronic
chr5:53392445(-) A-I      intronic
chr5:53410172(-) A-I      intronic
chr5:53424769(-) A-I      intronic
chr5:53424772(-) A-I      intronic
chr5:53424806(-) A-I      intronic
chr5:53453380(-) A-I      intronic
chr5:53535890(-) A-I      intronic
chr5:53544788(-) A-I      intronic
chr5:53544803(-) A-I      intronic
chr5:53565613(-) A-I      intronic
chr5:53565624(-) A-I      intronic
chr5:53565640(-) A-I      intronic
chr5:53570624(-) A-I      intronic
chr5:53570641(-) A-I      intronic
chr5:53570677(-) A-I      intronic
chr5:53570678(-) A-I      intronic
chr5:53595492(-) A-I      intronic
chr5:53595512(-) A-I      intronic
chr5:53595517(-) A-I      intronic
chr5:53595522(-) A-I      intronic
chr5:53595525(-) A-I      intronic
chr5:53595598(-) A-I      intronic
chr5:53595608(-) A-I      intronic
chr5:53595698(-) A-I      intronic
chr5:53599117(-) A-I      intronic
chr5:53599149(-) A-I      intronic
chr5:53599172(-) A-I      intronic
chr5:53599242(-) A-I      intronic
chr5:53599246(-) A-I      intronic
chr5:53602327(-) A-I      intronic
chr5:53602332(-) A-I      intronic
chr5:53366969(-) A-I      intronic
chr5:53353437(-) A-I      intronic
chr5:53342248(-) A-I      intronic
chr5:53337912(-) A-I      intronic
chr5:53328985(-) A-I      intronic
chr5:53322319(-) A-I      intronic
chr5:53322219(-) A-I      intronic
chr5:53240370(-) A-I      intronic
chr5:53240340(-) A-I      intronic
chr5:53234473(-) A-I      intronic
chr5:53189436(-) A-I      intronic
chr5:53189269(-) A-I      intronic
chr5:53352205(-) A-I      intronic
chr5:53602336(-) A-I      intronic
chr5:53602326(-) A-I      intronic
chr5:53602313(-) A-I      intronic
chr5:53565600(-) A-I      intronic
chr5:53365709(-) A-I      intronic
chr5:53365673(-) A-I      intronic
chr5:53365651(-) A-I      intronic
chr5:53325955(-) A-I      intronic
chr5:53325953(-) A-I      intronic
chr5:53317025(-) A-I      intronic
chr5:53317021(-) A-I      intronic
chr5:53317017(-) A-I      intronic
chr5:53317009(-) A-I      intronic
chr5:53307753(-) A-I      intronic
chr5:53231700(-) A-I      intronic
chr5:53231694(-) A-I      intronic
chr5:53231684(-) A-I      intronic
chr5:53231671(-) A-I      intronic
chr5:53221142(-) A-I      intronic
chr5:53203510(-) A-I      intronic
chr5:53203498(-) A-I      intronic
chr5:53203492(-) A-I      intronic
chr5:53393114(-) A-I      intronic
chr5:53393064(-) A-I      intronic
chr5:53393047(-) A-I      intronic
chr5:53383752(-) A-I      intronic
chr5:53382999(-) A-I      intronic
chr5:53382000(-) A-I      intronic
chr5:53381948(-) A-I      intronic
chr5:53381837(-) A-I      intronic
chr5:53377756(-) A-I      intronic
chr5:53371428(-) A-I      intronic
chr5:53189232(-) A-I      intronic
chr5:53189351(-) A-I      intronic
chr5:53189375(-) A-I      intronic
chr5:53194647(-) A-I      intronic
chr5:53194748(-) A-I      intronic
chr5:53195156(-) A-I      intronic
chr5:53195172(-) A-I      intronic
chr5:53203357(-) A-I      intronic
chr5:53203358(-) A-I      intronic
chr5:53203598(-) A-I      intronic
chr5:53208913(-) A-I      intronic
chr5:53208961(-) A-I      intronic
chr5:53209016(-) A-I      intronic
chr5:53209051(-) A-I      intronic
chr5:53209070(-) A-I      intronic
chr5:53209119(-) A-I      intronic
chr5:53210873(-) A-I      intronic
chr5:53210878(-) A-I      intronic
chr5:53210892(-) A-I      intronic
chr5:53210913(-) A-I      intronic
chr5:53210936(-) A-I      intronic
chr5:53221186(-) A-I      intronic
chr5:53221562(-) A-I      intronic
chr5:53221575(-) A-I      intronic
chr5:53229220(-) A-I      intronic
chr5:53229311(-) A-I      intronic
chr5:53229363(-) A-I      intronic
chr5:53229366(-) A-I      intronic
chr5:53231646(-) A-I      intronic
chr5:53231756(-) A-I      intronic
chr5:53231851(-) A-I      intronic
chr5:53231852(-) A-I      intronic
chr5:53234528(-) A-I      intronic
chr5:53234548(-) A-I      intronic
chr5:53234562(-) A-I      intronic
chr5:53234592(-) A-I      intronic
chr5:53234605(-) A-I      intronic
chr5:53234679(-) A-I      intronic
chr5:53235453(-) A-I      intronic
chr5:53235464(-) A-I      intronic
chr5:53235482(-) A-I      intronic
chr5:53235920(-) A-I      intronic
chr5:53235937(-) A-I      intronic
chr5:53235947(-) A-I      intronic
chr5:53236008(-) A-I      intronic
chr5:53240198(-) A-I      intronic
chr5:53240327(-) A-I      intronic
chr5:53240408(-) A-I      intronic
chr5:53259455(-) A-I      intronic
chr5:53259562(-) A-I      intronic
chr5:53260322(-) A-I      intronic
chr5:53264808(-) A-I      intronic
chr5:53264863(-) A-I      intronic
chr5:53275142(-) A-I      intronic
chr5:53275145(-) A-I      intronic
chr5:53275344(-) A-I      intronic
chr5:53275748(-) A-I      intronic
chr5:53275767(-) A-I      intronic
chr5:53290800(-) A-I      intronic
chr5:53300895(-) A-I      intronic
chr5:53300931(-) A-I      intronic
chr5:53301307(-) A-I      intronic
chr5:53301308(-) A-I      intronic
chr5:53302704(-) A-I      intronic
chr5:53302802(-) A-I      intronic
chr5:53302809(-) A-I      intronic
chr5:53307598(-) A-I      intronic
chr5:53307741(-) A-I      intronic
chr5:53307752(-) A-I      intronic
chr5:53307756(-) A-I      intronic
chr5:53307757(-) A-I      intronic
chr5:53308415(-) A-I      intronic
chr5:53308501(-) A-I      intronic
chr5:53308519(-) A-I      intronic
chr5:53308618(-) A-I      intronic
chr5:53308806(-) A-I      intronic
chr5:53311040(-) A-I      intronic
chr5:53322175(-) A-I      intronic
chr5:53324807(-) A-I      intronic
chr5:53324820(-) A-I      intronic
chr5:53324853(-) A-I      intronic
chr5:53325432(-) A-I      intronic
chr5:53325589(-) A-I      intronic
chr5:53325634(-) A-I      intronic
chr5:53325715(-) A-I      intronic
chr5:53325727(-) A-I      intronic
chr5:53325741(-) A-I      intronic
chr5:53325905(-) A-I      intronic
chr5:53325923(-) A-I      intronic
chr5:53325936(-) A-I      intronic
chr5:53325971(-) A-I      intronic
chr5:53326003(-) A-I      intronic
chr5:53328180(-) A-I      intronic
chr5:53328240(-) A-I      intronic
chr5:53328337(-) A-I      intronic
chr5:53328972(-) A-I      intronic
chr5:53328995(-) A-I      intronic
chr5:53329021(-) A-I      intronic
chr5:53329031(-) A-I      intronic
chr5:53329056(-) A-I      intronic
chr5:53329060(-) A-I      intronic
chr5:53329091(-) A-I      intronic
chr5:53329141(-) A-I      intronic
chr5:53329281(-) A-I      intronic
chr5:53329501(-) A-I      intronic
chr5:53329706(-) A-I      intronic
chr5:53329711(-) A-I      intronic
chr5:53329776(-) A-I      intronic
chr5:53329818(-) A-I      intronic
chr5:53329827(-) A-I      intronic
chr5:53329907(-) A-I      intronic
chr5:53329910(-) A-I      intronic
chr5:53330581(-) A-I      intronic
chr5:53330741(-) A-I      intronic
chr5:53310557(-) A-I      intronic
chr5:53264858(-) A-I      intronic
chr5:53354103(-) A-I      intronic
chr5:53354000(-) A-I      intronic
chr5:53307832(-) A-I      intronic
chr5:53486136(-) A-I      intronic
chr5:53203528(-) A-I      intronic
chr5:53290777(-) A-I      intronic
chr5:53350508(-) A-I      intronic
chr5:53371481(-) A-I      intronic
chr5:53290778(-) A-I      intronic
chr5:53365664(-) A-I      intronic
chr5:53307682(-) A-I      intronic
chr5:53322323(-) A-I      intronic
chr5:53366754(-) A-I      intronic
chr5:53275736(-) A-I      intronic
chr5:53329315(-) A-I      intronic
chr5:53325897(-) A-I      intronic
chr5:53354004(-) A-I      intronic
chr5:53371549(-) A-I      intronic
chr5:53365668(-) A-I      intronic
chr5:53308493(-) A-I      intronic
chr5:53365332(-) A-I      intronic
chr5:53259475(-) A-I      intronic
chr5:53325979(-) A-I      intronic
chr5:53203607(-) A-I      intronic
chr5:53365778(-) A-I      intronic
chr5:53366606(-) A-I      intronic
chr5:53311002(-) A-I      intronic
chr5:53586261(-) A-I      intronic
chr5:53371343(-) A-I      intronic
chr5:53306671(-) A-I      intronic
chr5:53310454(-) A-I      intronic
chr5:53570570(-) A-I      intronic
chr5:53221128(-) A-I      intronic
chr5:53210752(-) A-I      intronic
chr5:53377812(-) A-I      intronic
chr5:53221158(-) A-I      intronic
chr5:53192582(-) A-I      intronic
chr5:53306599(-) A-I      intronic
chr5:53221448(-) A-I      intronic
chr5:53194631(-) A-I      intronic
chr5:53328201(-) A-I      intronic
chr5:53365964(-) A-I      intronic
chr5:53306598(-) A-I      intronic
chr5:53203590(-) A-I      intronic
chr5:53229286(-) A-I      intronic
chr5:53339747(-) A-I      intronic
chr5:53599101(-) A-I      intronic
chr5:53306681(-) A-I      intronic
chr5:53310381(-) A-I      intronic
chr5:53339809(-) A-I      intronic
chr5:53382922(-) A-I      intronic
chr5:53264896(-) A-I      intronic
chr5:53365732(-) A-I      intronic
chr5:53339831(-) A-I      intronic
chr5:53221551(-) A-I      intronic
chr5:53203496(-) A-I      intronic
chr5:53352294(-) A-I      intronic
chr5:53365289(-) A-I      intronic
chr5:53185847(-) A-I      intronic
chr5:53253567(-) A-I      intronic
chr5:53375678(-) A-I      intronic
chr5:53310549(-) A-I      intronic
chr5:53264729(-) A-I      intronic
chr5:53275816(-) A-I      intronic
chr5:53365495(-) A-I      intronic
chr5:53221376(-) A-I      intronic
chr5:53351184(-) A-I      intronic
chr5:53210737(-) A-I      intronic
chr5:53275195(-) A-I      intronic
chr5:53231747(-) A-I      intronic
chr5:53311039(-) A-I      intronic
chr5:53353499(-) A-I      intronic
chr5:53290704(-) A-I      intronic
chr5:53365235(-) A-I      intronic
chr5:53602494(-) A-I      intronic
chr5:53602493(-) A-I      intronic
chr5:53323971(-) A-I      intronic
chr5:53184400(-) A-I      intronic
chr5:53306597(-) A-I      intronic
chr5:53324024(-) A-I      intronic
chr5:53210805(-) A-I      intronic
chr5:53310447(-) A-I      intronic
chr5:53593884(-) A-I      intronic
chr5:53353670(-) A-I      intronic
chr5:53353597(-) A-I      intronic
chr5:53353445(-) A-I      intronic
chr5:53301397(-) A-I      intronic
chr5:53221616(-) A-I      intronic
chr5:53383634(-) A-I      intronic
chr5:53330604(-) A-I      intronic
chr5:53354109(-) A-I      intronic
chr5:53352227(-) A-I      intronic
chr5:53184322(-) A-I      intronic
chr5:53307673(-) A-I      intronic
chr5:53306583(-) A-I      intronic
chr5:53329390(-) A-I      intronic
chr5:53328907(-) A-I      intronic
chr5:53229247(-) A-I      intronic
chr5:53351287(-) A-I      intronic
chr5:53260354(-) A-I      intronic
chr5:53303474(-) A-I      intronic
chr5:53371438(-) A-I      intronic
chr5:53210779(-) A-I      intronic
chr5:53195121(-) A-I      intronic
chr5:53308629(-) A-I      intronic
chr5:53259516(-) A-I      intronic
chr5:53330627(-) A-I      intronic
chr5:53365632(-) A-I      intronic
chr5:53338071(-) A-I      intronic
chr5:53324776(-) A-I      intronic
chr5:53353947(-) A-I      intronic
chr5:53353633(-) A-I      intronic
chr5:53310357(-) A-I      intronic
chr5:53211847(-) A-I      intronic
chr5:53221445(-) A-I      intronic
chr5:53214256(-) A-I      intronic
chr5:53377838(-) A-I      intronic
chr5:53571859(-) A-I      intronic
chr5:53188525(-) A-I      intronic
chr5:53210778(-) A-I      intronic
chr5:53264815(-) A-I      intronic
chr5:53366505(-) A-I      intronic
chr5:53602415(-) A-I      intronic
chr5:53308401(-) A-I      intronic
chr5:53260395(-) A-I      intronic
chr5:53401551(-) A-I      intronic
chr5:53188673(-) A-I      intronic
chr5:53383643(-) A-I      intronic
chr5:53310448(-) A-I      intronic
chr5:53307597(-) A-I      intronic
chr5:53353592(-) A-I      intronic
chr5:53340190(-) A-I      intronic
chr5:53599335(-) A-I      intronic
chr5:53348972(-) A-I      intronic
chr5:53340252(-) A-I      intronic
chr5:53599314(-) A-I      intronic
chr5:53595574(-) A-I      intronic
chr5:53594931(-) A-I      intronic
chr5:53340251(-) A-I      intronic
chr5:53231869(-) A-I      intronic
chr5:53424632(-) A-I      intronic
chr5:53308903(-) A-I      intronic
chr5:53381976(-) A-I      intronic
chr5:53194530(-) A-I      intronic
chr5:53325567(-) A-I      intronic
chr5:53599134(-) A-I      intronic
chr5:53329466(-) A-I      intronic
chr5:53372142(-) A-I      intronic
chr5:53351302(-) A-I      intronic
chr5:53577134(-) A-I      intronic
chr5:53329916(-) A-I      intronic
chr5:53329471(-) A-I      intronic
chr5:53275159(-) A-I      intronic
chr5:53337994(-) A-I      intronic
chr5:53354030(-) A-I      intronic
chr5:53599327(-) A-I      intronic
chr5:53365292(-) A-I      intronic
chr5:53274365(-) A-I      intronic
chr5:53308768(-) A-I      intronic
chr5:53184275(-) A-I      intronic
chr5:53454672(-) A-I      intronic
chr5:53594809(-) A-I      intronic
chr5:53275166(-) A-I      intronic
chr5:53361261(-) A-I      intronic
chr5:53328978(-) A-I      intronic
chr5:53260485(-) A-I      intronic
chr5:53324639(-) A-I      intronic
chr5:53307715(-) A-I      intronic
chr5:53354011(-) A-I      intronic
chr5:53328263(-) A-I      intronic
chr5:53308812(-) A-I      intronic
chr5:53372141(-) A-I      intronic
chr5:53350431(-) A-I      intronic
chr5:53365596(-) A-I      intronic
chr5:53595618(-) A-I      intronic
chr5:53371406(-) A-I      intronic
chr5:53602409(-) A-I      intronic
chr5:53383709(-) A-I      intronic
chr5:53340202(-) A-I      intronic
chr5:53209050(-) A-I      intronic
chr5:53307656(-) A-I      intronic
chr5:53274448(-) A-I      intronic
chr5:53371422(-) A-I      intronic
chr5:53602472(-) A-I      intronic
chr5:53353480(-) A-I      intronic
chr5:53353632(-) A-I      intronic
chr5:53275158(-) A-I      intronic
chr5:53595613(-) A-I      intronic
chr5:53307787(-) A-I      intronic
chr5:53234561(-) A-I      intronic
chr5:53300881(-) A-I      intronic
chr5:53329386(-) A-I      intronic
chr5:53383748(-) A-I      intronic
chr5:53221154(-) A-I      intronic
chr5:53365615(-) A-I      intronic
chr5:53325969(-) A-I      intronic
chr5:53188655(-) A-I      intronic
chr5:53184332(-) A-I      intronic
chr5:53209025(-) A-I      intronic
chr5:53353423(-) A-I      intronic
chr5:53194974(-) A-I      intronic
chr5:53595004(-) A-I      intronic
chr5:53242033(-) A-I      intronic
chr5:53383688(-) A-I      intronic
chr5:53353610(-) A-I      intronic
chr5:53401617(-) A-I      intronic
chr5:53329362(-) A-I      intronic
chr5:53382923(-) A-I      intronic
chr5:53310479(-) A-I      intronic
chr5:53351373(-) A-I      intronic
chr5:53300938(-) A-I      intronic
chr5:53302676(-) A-I      intronic
chr5:53371520(-) A-I      intronic
chr5:53234579(-) A-I      intronic
chr5:53401592(-) A-I      intronic
chr5:53308438(-) A-I      intronic
chr5:53365150(-) A-I      intronic
chr5:53567836(-) A-I      intronic
chr5:53209095(-) A-I      intronic
chr5:53231716(-) A-I      intronic
chr5:53366900(-) A-I      intronic
chr5:53310466(-) A-I      intronic
chr5:53325922(-) A-I      intronic
chr5:53240353(-) A-I      intronic
chr5:53194700(-) A-I      intronic
chr5:53260328(-) A-I      intronic
chr5:53371559(-) A-I      intronic
chr5:53231825(-) A-I      intronic
chr5:53567914(-) A-I      intronic
chr5:53361494(-) A-I      intronic
chr5:53308809(-) A-I      intronic
chr5:53339752(-) A-I      intronic
chr5:53353461(-) A-I      intronic
chr5:53367634(-) A-I      intronic
chr5:53275160(-) A-I      intronic
chr5:53401612(-) A-I      intronic
chr5:53185781(-) A-I      intronic
chr5:53570510(-) A-I      intronic
chr5:53308470(-) A-I      intronic
chr5:53322395(-) A-I      intronic
chr5:53275799(-) A-I      intronic
chr5:53353462(-) A-I      intronic
chr5:53221141(-) A-I      intronic
chr5:53214197(-) A-I      intronic
chr5:53322379(-) A-I      intronic
chr5:53324740(-) A-I      intronic
chr5:53307717(-) A-I      intronic
chr5:53221538(-) A-I      intronic
chr5:53375676(-) A-I      intronic
chr5:53307808(-) A-I      intronic
chr5:53365231(-) A-I      intronic
chr5:53462100(-) A-I      intronic
chr5:53352295(-) A-I      intronic
chr5:53371380(-) A-I      intronic
chr5:53221385(-) A-I      intronic
chr5:53325492(-) A-I      intronic
chr5:53231783(-) A-I      intronic
chr5:53595692(-) A-I      intronic
chr5:53234652(-) A-I      intronic
chr5:53221300(-) A-I      intronic
chr5:53372127(-) A-I      intronic
chr5:53354006(-) A-I      intronic
chr5:53240273(-) A-I      intronic
chr5:53377809(-) A-I      intronic
chr5:53383046(-) A-I      intronic
chr5:53328956(-) A-I      intronic
chr5:53275772(-) A-I      intronic
chr5:53322373(-) A-I      intronic
chr5:53185812(-) A-I      intronic
chr5:53350453(-) A-I      intronic
chr5:53377759(-) A-I      intronic
chr5:53393025(-) A-I      intronic
chr5:53221450(-) A-I      intronic
chr5:53308382(-) A-I      intronic
chr5:53259381(-) A-I      intronic
chr5:53288694(-) A-I      intronic
chr5:53303380(-) A-I      intronic
chr5:53383002(-) A-I      intronic
chr5:53188721(-) A-I      intronic
chr5:53221246(-) A-I      intronic
chr5:53393023(-) A-I      intronic
chr5:53303416(-) A-I      intronic
chr5:53345179(-) A-I      intronic
chr5:53352360(-) A-I      intronic
chr5:53424633(-) A-I      intronic
chr5:53567866(-) A-I      intronic
chr5:53264611(-) A-I      intronic
chr5:53231690(-) A-I      intronic
chr5:53208985(-) A-I      intronic
chr5:53194757(-) A-I      intronic
chr5:53471329(-) A-I      intronic
chr5:53275785(-) A-I      intronic
chr5:53185764(-) A-I      intronic
chr5:53292266(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED ARL15
chr5:53306583(-) A-I intron -    22028664
chr5:53306597(-) A-I intron -    22028664
chr5:53306598(-) A-I intron -    22028664
chr5:53306599(-) A-I intron -    22028664
chr5:53306607(-) A-I intron -    22028664
chr5:53306681(-) A-I intron -    22028664
chr5:53209099(-) A-I intron -    21960545
chr5:53300909(-) A-I intron -    21960545
chr5:53237987(-) A-T intron -    22484847
chr5:53237988(-) G-C intron -    22484847
chr5:53194631(-) A-G intron -    22484847
chr5:53194974(-) A-G intron -    22484847
chr5:53211847(-) A-G intron -    22484847
chr5:53221141(-) A-G intron -    22484847
chr5:53221158(-) A-G intron -    22484847
chr5:53221445(-) A-G intron -    22484847
chr5:53221448(-) A-G intron -    22484847
chr5:53221450(-) A-G intron -    22484847
chr5:53221522(-) A-G intron -    22484847
chr5:53221551(-) A-G intron -    22484847
chr5:53221552(-) A-G intron -    22484847
chr5:53229247(-) A-G intron -    22484847
chr5:53229286(-) A-G intron -    22484847
chr5:53229317(-) A-G intron -    22484847
chr5:53231681(-) A-G intron -    22484847
chr5:53231690(-) A-G intron -    22484847
chr5:53231703(-) A-G intron -    22484847
chr5:53231716(-) A-G intron -    22484847
chr5:53231743(-) A-G intron -    22484847
chr5:53231747(-) A-G intron -    22484847
chr5:53231825(-) A-G intron -    22484847
chr5:53234579(-) A-G intron -    22484847
chr5:53234591(-) A-G intron -    22484847
chr5:53234652(-) A-G intron -    22484847
chr5:53234668(-) A-G intron -    22484847
chr5:53259516(-) A-G intron -    22484847
chr5:53259526(-) A-G intron -    22484847
chr5:53260485(-) A-G intron -    22484847
chr5:53264611(-) A-G intron -    22484847
chr5:53264729(-) A-G intron -    22484847
chr5:53264748(-) A-G intron -    22484847
chr5:53264815(-) A-G intron -    22484847
chr5:53275141(-) A-G intron -    22484847
chr5:53275158(-) A-G intron -    22484847
chr5:53275159(-) A-G intron -    22484847
chr5:53275160(-) A-G intron -    22484847
chr5:53275166(-) A-G intron -    22484847
chr5:53275183(-) A-G intron -    22484847
chr5:53275190(-) A-G intron -    22484847
chr5:53275195(-) A-G intron -    22484847
chr5:53275736(-) A-G intron -    22484847
chr5:53275738(-) A-G intron -    22484847
chr5:53275761(-) A-G intron -    22484847
chr5:53275772(-) A-G intron -    22484847
chr5:53275799(-) A-G intron -    22484847
chr5:53275816(-) A-C intron -    22484847
chr5:53284143(-) C-T intron -    22484847
chr5:53300930(-) A-G intron -    22484847
chr5:53301397(-) A-G intron -    22484847
chr5:53303474(-) A-G intron -    22484847
chr5:53307673(-) A-G intron -    22484847
chr5:53307676(-) A-G intron -    22484847
chr5:53307715(-) A-G intron -    22484847
chr5:53307717(-) A-G intron -    22484847
chr5:53307787(-) A-G intron -    22484847
chr5:53307808(-) A-G intron -    22484847
chr5:53308492(-) A-G intron -    22484847
chr5:53308493(-) A-G intron -    22484847
chr5:53310381(-) A-G intron -    22484847
chr5:53310427(-) A-G intron -    22484847
chr5:53310447(-) A-G intron -    22484847
chr5:53310448(-) A-G intron -    22484847
chr5:53310454(-) A-G intron -    22484847
chr5:53310479(-) A-G intron -    22484847
chr5:53310488(-) A-G intron -    22484847
chr5:53310489(-) A-G intron -    22484847
chr5:53310557(-) A-G intron -    22484847
chr5:53310906(-) A-G intron -    22484847
chr5:53311002(-) A-G intron -    22484847
chr5:53311046(-) A-G intron -    22484847
chr5:53322323(-) A-G intron -    22484847
chr5:53322373(-) A-G intron -    22484847
chr5:53322379(-) A-G intron -    22484847
chr5:53322395(-) A-G intron -    22484847
chr5:53323888(-) A-G intron -    22484847
chr5:53323971(-) A-G intron -    22484847
chr5:53324639(-) A-G intron -    22484847
chr5:53324730(-) A-G intron -    22484847
chr5:53324740(-) A-G intron -    22484847
chr5:53325492(-) A-G intron -    22484847
chr5:53325496(-) A-G intron -    22484847
chr5:53325969(-) A-G intron -    22484847
chr5:53325979(-) A-G intron -    22484847
chr5:53326002(-) A-G intron -    22484847
chr5:53328201(-) A-G intron -    22484847
chr5:53328215(-) A-G intron -    22484847
chr5:53328263(-) A-G intron -    22484847
chr5:53328338(-) A-G intron -    22484847
chr5:53328907(-) A-G intron -    22484847
chr5:53328923(-) A-G intron -    22484847
chr5:53328941(-) A-G intron -    22484847
chr5:53328956(-) A-G intron -    22484847
chr5:53328978(-) A-G intron -    22484847
chr5:53328981(-) A-G intron -    22484847
chr5:53329043(-) A-G intron -    22484847
chr5:53329315(-) A-G intron -    22484847
chr5:53329466(-) A-G intron -    22484847
chr5:53329471(-) A-G intron -    22484847
chr5:53329808(-) A-G intron -    22484847
chr5:53329848(-) A-G intron -    22484847
chr5:53329876(-) A-G intron -    22484847
chr5:53329916(-) A-G intron -    22484847
chr5:53330596(-) A-G intron -    22484847
chr5:53330613(-) A-G intron -    22484847
chr5:53330627(-) A-G intron -    22484847
chr5:53338071(-) A-G intron -    22484847
chr5:53339747(-) A-G intron -    22484847
chr5:53339752(-) A-G intron -    22484847
chr5:53339758(-) A-G intron -    22484847
chr5:53339764(-) A-G intron -    22484847
chr5:53339831(-) A-G intron -    22484847
chr5:53340189(-) A-G intron -    22484847
chr5:53340190(-) A-G intron -    22484847
chr5:53340251(-) A-G intron -    22484847
chr5:53340252(-) A-G intron -    22484847
chr5:53350498(-) A-G intron -    22484847
chr5:53351373(-) A-G intron -    22484847
chr5:53351466(-) A-G intron -    22484847
chr5:53352294(-) A-G intron -    22484847
chr5:53352295(-) A-G intron -    22484847
chr5:53352298(-) A-G intron -    22484847
chr5:53352360(-) A-G intron -    22484847
chr5:53353462(-) A-G intron -    22484847
chr5:53353506(-) A-G intron -    22484847
chr5:53353592(-) A-G intron -    22484847
chr5:53353597(-) A-G intron -    22484847
chr5:53353633(-) A-G intron -    22484847
chr5:53353670(-) A-G intron -    22484847
chr5:53354000(-) A-G intron -    22484847
chr5:53354003(-) A-G intron -    22484847
chr5:53354004(-) A-G intron -    22484847
chr5:53354011(-) A-G intron -    22484847
chr5:53354030(-) A-G intron -    22484847
chr5:53354103(-) A-G intron -    22484847
chr5:53356071(-) A-G intron -    22484847
chr5:53361494(-) A-G intron -    22484847
chr5:53365150(-) A-G intron -    22484847
chr5:53365156(-) A-G intron -    22484847
chr5:53365235(-) A-G intron -    22484847
chr5:53365325(-) A-G intron -    22484847
chr5:53365332(-) A-G intron -    22484847
chr5:53365495(-) A-G intron -    22484847
chr5:53365615(-) A-G intron -    22484847
chr5:53365641(-) A-G intron -    22484847
chr5:53365668(-) A-G intron -    22484847
chr5:53365708(-) A-G intron -    22484847
chr5:53365732(-) A-G intron -    22484847
chr5:53365761(-) A-G intron -    22484847
chr5:53365769(-) A-G intron -    22484847
chr5:53365778(-) A-G intron -    22484847
chr5:53365964(-) A-G intron -    22484847
chr5:53366505(-) A-G intron -    22484847
chr5:53366754(-) A-G intron -    22484847
chr5:53366888(-) A-G intron -    22484847
chr5:53366900(-) A-G intron -    22484847
chr5:53367634(-) A-G intron -    22484847
chr5:53367644(-) A-G intron -    22484847
chr5:53371343(-) A-G intron -    22484847
chr5:53371375(-) A-G intron -    22484847
chr5:53371376(-) A-G intron -    22484847
chr5:53371422(-) A-G intron -    22484847
chr5:53371438(-) A-G intron -    22484847
chr5:53371441(-) A-G intron -    22484847
chr5:53371449(-) A-G intron -    22484847
chr5:53371481(-) A-G intron -    22484847
chr5:53371520(-) A-G intron -    22484847
chr5:53371544(-) A-G intron -    22484847
chr5:53371549(-) A-G intron -    22484847
chr5:53371559(-) A-G intron -    22484847
chr5:53371572(-) A-G intron -    22484847
chr5:53372057(-) A-G intron -    22484847
chr5:53372127(-) A-G intron -    22484847
chr5:53372141(-) A-G intron -    22484847
chr5:53372142(-) A-G intron -    22484847
chr5:53377719(-) A-G intron -    22484847
chr5:53382038(-) A-G intron -    22484847
chr5:53382922(-) A-G intron -    22484847
chr5:53382977(-) A-G intron -    22484847
chr5:53383002(-) A-G intron -    22484847
chr5:53383046(-) A-G intron -    22484847
chr5:53383630(-) A-G intron -    22484847
chr5:53383643(-) A-G intron -    22484847
chr5:53383709(-) A-G intron -    22484847
chr5:53383748(-) A-G intron -    22484847
chr5:53392444(-) A-G intron -    22484847
chr5:53393025(-) A-G intron -    22484847
chr5:53401505(-) G-A intron -    22484847
chr5:53454640(-) A-G intron -    22484847
chr5:53570510(-) A-G intron -    22484847
chr5:53586261(-) A-G intron -    22484847
chr5:53599241(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ARL15
chr5:53181729-53181730(-) m6A 3'UTR       27773535
chr5:53181856-53181857(-) m6A 3'UTR       27773535
chr5:53181883-53181884(-) m6A 3'UTR       27773535//22608085
chr5:53181948-53181949(-) m6A 3'UTR       24284625//24981863//27773535//22608085
chr5:53181978-53181979(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22608085
chr5:53182027-53182028(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22608085
chr5:53182036-53182037(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22608085
chr5:53182046-53182047(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22608085
chr5:53182265-53182266(-) m6A 3'UTR       24981863//27773535//22608085
chr5:53182307-53182308(-) m6A 3'UTR//exon       24981863//22608085
chr5:53182352-53182353(-) m6A 3'UTR//exon       24981863//22608085
chr5:53182374-53182375(-) m6A 3'UTR//exon       24981863//22608085
chr5:53182412-53182413(-) m6A CDS//exon       22608085
chr5:53182451-53182452(-) m6A CDS//exon       22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-30c-2-3p
Exosome B cell line (Raji)|Jurkat-derived T cell line (J77cl20)     21505438
Exosome Plasma     23663360
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Seminal plasma     23539611
Microvesicle Serum     24797360
Microvesicle Fibroblasts|Mesenchymal stem cells     -
Mitochondrion Cell line (HEK-293|HeLa)     22984580
ARL15
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HCC cell line (HepG2)|K562 cells     -
Exosome Blood     -
Membrane HCC cell line (HepG2)|K562 cells     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Related Drug Information:


Resource Symbol Drug Name PubChem
ID
Function Link  
RNAInter hsa-miR-30c-2-3p
Gemcitabine 60750 Drug interaction    RC00006870
Eloxatine 5310940 Drug interaction    RC00006871
5-Fluorouracil 3385 Drug interaction    RC00006869
Resource Symbol Drug Name PubChem ID PMID
NoncoRNA hsa-miR-30c-2-3p

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-30c-2-3p
Interactor2: ARL15

Evidence Support:


Weak-Evidence PAR-CLIP
Support Database ViRBase

References:


PMID 22291592 Target region 3'UTR
Source ViRBase Interactor1 expression None
Tissue or cell line EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells Interactor2 expression None
Description We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.

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