Detail Information

Basic Information:


  VIRBase ID:  

HHID00064879

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-30c-2-3p:           CDK12:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-30c-2-3p CDK12
miRBase
Accession/Entrez ID
MIMAT0004550 51755
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - CRK7//CRKR//CRKRS

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-30c-2-3p
rs1262929323 chr6:71376964    A/G
rs1413659455 chr6:71376968    T/C
rs1421032991 chr6:71376975    C/A
rs1421032991 chr6:71376975    C/G
rs1488181071 chr6:71376967    G/T
rs747913643 chr6:71376976    C/A
rs760276048 chr6:71376974    G/C
rs775896072 chr6:71376969    A/G

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR CDK12
chr17:37660972(+) A-I      intronic
chr17:37660954(+) A-I      intronic
chr17:37620567(+) A-I      intronic
chr17:37620560(+) A-I      intronic
chr17:37620553(+) A-I      intronic
chr17:37620538(+) A-I      intronic
chr17:37680097(+) A-I      intronic
chr17:37680166(+) A-I      intronic
chr17:37620548(+) A-I      intronic
chr17:37656387(+) A-I      intronic
chr17:37655967(+) A-I      intronic
chr17:37655904(+) A-I      intronic
chr17:37654981(+) A-I      intronic
chr17:37654922(+) A-I      intronic
chr17:37654884(+) A-I      intronic
chr17:37654883(+) A-I      intronic
chr17:37654882(+) A-I      intronic
chr17:37653728(+) A-I      intronic
chr17:37653587(+) A-I      intronic
chr17:37653572(+) A-I      intronic
chr17:37653352(+) A-I      intronic
chr17:37653283(+) A-I      intronic
chr17:37653248(+) A-I      intronic
chr17:37653206(+) A-I      intronic
chr17:37652875(+) A-I      intronic
chr17:37621966(+) A-I      intronic
chr17:37652799(+) A-I      intronic
chr17:37652788(+) A-I      intronic
chr17:37652681(+) A-I      intronic
chr17:37652416(+) A-I      intronic
chr17:37652345(+) A-I      intronic
chr17:37652310(+) A-I      intronic
chr17:37652294(+) A-I      intronic
chr17:37652264(+) A-I      intronic
chr17:37652220(+) A-I      intronic
chr17:37651998(+) A-I      intronic
chr17:37651937(+) A-I      intronic
chr17:37651927(+) A-I      intronic
chr17:37651773(+) A-I      intronic
chr17:37651767(+) A-I      intronic
chr17:37651357(+) A-I      intronic
chr17:37650507(+) A-I      intronic
chr17:37650488(+) A-I      intronic
chr17:37650466(+) A-I      intronic
chr17:37650431(+) A-I      intronic
chr17:37650191(+) A-I      intronic
chr17:37650128(+) A-I      intronic
chr17:37650064(+) A-I      intronic
chr17:37650061(+) A-I      intronic
chr17:37649995(+) A-I      intronic
chr17:37648938(+) A-I      intronic
chr17:37648869(+) A-I      intronic
chr17:37646570(+) A-I      intronic
chr17:37646540(+) A-I      intronic
chr17:37646526(+) A-I      intronic
chr17:37646517(+) A-I      intronic
chr17:37646500(+) A-I      intronic
chr17:37646473(+) A-I      intronic
chr17:37646418(+) A-I      intronic
chr17:37646405(+) A-I      intronic
chr17:37645863(+) A-I      intronic
chr17:37645592(+) A-I      intronic
chr17:37645591(+) A-I      intronic
chr17:37645504(+) A-I      intronic
chr17:37645491(+) A-I      intronic
chr17:37645365(+) A-I      intronic
chr17:37645277(+) A-I      intronic
chr17:37645274(+) A-I      intronic
chr17:37645273(+) A-I      intronic
chr17:37645248(+) A-I      intronic
chr17:37645161(+) A-I      intronic
chr17:37645151(+) A-I      intronic
chr17:37645078(+) A-I      intronic
chr17:37645060(+) A-I      intronic
chr17:37643950(+) A-I      intronic
chr17:37643895(+) A-I      intronic
chr17:37643181(+) A-I      intronic
chr17:37643176(+) A-I      intronic
chr17:37643102(+) A-I      intronic
chr17:37642229(+) A-I      intronic
chr17:37641312(+) A-I      intronic
chr17:37641273(+) A-I      intronic
chr17:37641177(+) A-I      intronic
chr17:37640035(+) A-I      intronic
chr17:37639760(+) A-I      intronic
chr17:37639745(+) A-I      intronic
chr17:37639647(+) A-I      intronic
chr17:37638475(+) A-I      intronic
chr17:37637323(+) A-I      intronic
chr17:37637251(+) A-I      intronic
chr17:37636730(+) A-I      intronic
chr17:37636439(+) A-I      intronic
chr17:37653669(+) A-I      intronic
chr17:37636420(+) A-I      intronic
chr17:37636154(+) A-I      intronic
chr17:37636142(+) A-I      intronic
chr17:37635984(+) A-I      intronic
chr17:37635903(+) A-I      intronic
chr17:37635481(+) A-I      intronic
chr17:37635449(+) A-I      intronic
chr17:37635337(+) A-I      intronic
chr17:37634584(+) A-I      intronic
chr17:37632796(+) A-I      intronic
chr17:37632770(+) A-I      intronic
chr17:37632767(+) A-I      intronic
chr17:37632598(+) A-I      intronic
chr17:37632499(+) A-I      intronic
chr17:37632489(+) A-I      intronic
chr17:37632462(+) A-I      intronic
chr17:37631989(+) A-I      intronic
chr17:37631974(+) A-I      intronic
chr17:37631641(+) A-I      intronic
chr17:37631632(+) A-I      intronic
chr17:37631595(+) A-I      intronic
chr17:37631521(+) A-I      intronic
chr17:37631473(+) A-I      intronic
chr17:37631468(+) A-I      intronic
chr17:37631317(+) A-I      intronic
chr17:37631310(+) A-I      intronic
chr17:37631217(+) A-I      intronic
chr17:37631143(+) A-I      intronic
chr17:37630829(+) A-I      intronic
chr17:37630689(+) A-I      intronic
chr17:37630684(+) A-I      intronic
chr17:37630595(+) A-I      intronic
chr17:37630063(+) A-I      intronic
chr17:37630015(+) A-I      intronic
chr17:37629985(+) A-I      intronic
chr17:37629848(+) A-I      intronic
chr17:37629825(+) A-I      intronic
chr17:37629208(+) A-I      intronic
chr17:37629202(+) A-I      intronic
chr17:37629182(+) A-I      intronic
chr17:37629111(+) A-I      intronic
chr17:37629095(+) A-I      intronic
chr17:37628876(+) A-I      intronic
chr17:37628816(+) A-I      intronic
chr17:37628807(+) A-I      intronic
chr17:37628417(+) A-I      intronic
chr17:37667347(+) A-I      intronic
chr17:37667257(+) A-I      intronic
chr17:37667236(+) A-I      intronic
chr17:37666624(+) A-I      intronic
chr17:37666574(+) A-I      intronic
chr17:37666167(+) A-I      intronic
chr17:37665226(+) A-I      intronic
chr17:37663718(+) A-I      intronic
chr17:37663687(+) A-I      intronic
chr17:37663684(+) A-I      intronic
chr17:37663678(+) A-I      intronic
chr17:37663675(+) A-I      intronic
chr17:37663669(+) A-I      intronic
chr17:37663664(+) A-I      intronic
chr17:37666184(+) A-I      intronic
chr17:37663330(+) A-I      intronic
chr17:37663315(+) A-I      intronic
chr17:37662743(+) A-I      intronic
chr17:37662721(+) A-I      intronic
chr17:37662651(+) A-I      intronic
chr17:37661212(+) A-I      intronic
chr17:37661206(+) A-I      intronic
chr17:37660980(+) A-I      intronic
chr17:37660948(+) A-I      intronic
chr17:37628258(+) A-I      intronic
chr17:37626513(+) A-I      intronic
chr17:37660922(+) A-I      intronic
chr17:37660900(+) A-I      intronic
chr17:37660876(+) A-I      intronic
chr17:37659526(+) A-I      intronic
chr17:37659523(+) A-I      intronic
chr17:37659509(+) A-I      intronic
chr17:37659492(+) A-I      intronic
chr17:37659491(+) A-I      intronic
chr17:37659426(+) A-I      intronic
chr17:37659362(+) A-I      intronic
chr17:37626467(+) A-I      intronic
chr17:37659307(+) A-I      intronic
chr17:37624806(+) A-I      intronic
chr17:37622792(+) A-I      intronic
chr17:37622648(+) A-I      intronic
chr17:37622302(+) A-I      intronic
chr17:37621464(+) A-I      intronic
chr17:37621883(+) A-I      intronic
chr17:37659277(+) A-I      intronic
chr17:37659252(+) A-I      intronic
chr17:37657031(+) A-I      intronic
chr17:37656757(+) A-I      intronic
chr17:37667389(+) A-I      intronic
chr17:37680120(+) A-I      intronic
chr17:37680087(+) A-I      intronic
chr17:37680046(+) A-I      intronic
chr17:37680007(+) A-I      intronic
chr17:37679607(+) A-I      intronic
chr17:37679572(+) A-I      intronic
chr17:37679281(+) A-I      intronic
chr17:37679199(+) A-I      intronic
chr17:37679177(+) A-I      intronic
chr17:37678602(+) A-I      intronic
chr17:37678574(+) A-I      intronic
chr17:37678531(+) A-I      intronic
chr17:37677705(+) A-I      intronic
chr17:37677627(+) A-I      intronic
chr17:37677623(+) A-I      intronic
chr17:37677260(+) A-I      intronic
chr17:37676854(+) A-I      intronic
chr17:37676824(+) A-I      intronic
chr17:37676773(+) A-I      intronic
chr17:37676770(+) A-I      intronic
chr17:37671372(+) A-I      intronic
chr17:37671302(+) A-I      intronic
chr17:37655561(+) A-I      intronic
chr17:37661033(+) A-I      intronic
chr17:37622612(+) A-I      intronic
chr17:37621395(+) A-I      intronic
chr17:37678867(+) A-I      intronic
chr17:37648171(+) A-I      intronic
chr17:37621348(+) A-I      intronic
chr17:37663214(+) A-I      intronic
chr17:37629074(+) A-I      intronic
chr17:37679581(+) A-I      intronic
chr17:37656437(+) A-I      intronic
chr17:37632563(+) A-I      intronic
chr17:37621474(+) A-I      intronic
chr17:37657119(+) A-I      intronic
chr17:37650062(+) A-I      intronic
chr17:37638533(+) A-I      intronic
chr17:37631497(+) A-I      intronic
chr17:37637632(+) A-I      intronic
chr17:37634993(+) A-I      intronic
chr17:37632537(+) A-I      intronic
chr17:37643124(+) A-I      intronic
chr17:37632504(+) A-I      intronic
chr17:37665513(+) A-I      intronic
chr17:37636360(+) A-I      intronic
chr17:37632849(+) A-I      intronic
chr17:37659247(+) A-I      intronic
chr17:37651790(+) A-I      intronic
chr17:37645630(+) A-I      intronic
chr17:37639057(+) A-I      intronic
chr17:37622618(+) A-I      intronic
chr17:37676839(+) A-I      intronic
chr17:37628306(+) A-I      intronic
chr17:37643931(+) A-I      intronic
chr17:37660981(+) A-I      intronic
chr17:37631611(+) A-I      intronic
chr17:37633354(+) A-I      intronic
chr17:37634836(+) A-I      intronic
chr17:37654852(+) A-I      intronic
chr17:37639440(+) A-I      intronic
chr17:37679126(+) A-I      intronic
chr17:37628337(+) A-I      intronic
chr17:37677624(+) A-I      intronic
chr17:37660883(+) A-I      intronic
chr17:37632392(+) A-I      intronic
chr17:37656401(+) A-I      intronic
chr17:37628288(+) A-I      intronic
chr17:37628349(+) A-I      intronic
chr17:37628766(+) A-I      intronic
chr17:37679986(+) A-I      intronic
chr17:37637243(+) A-I      intronic
chr17:37679565(+) A-I      intronic
chr17:37621839(+) A-I      intronic
chr17:37630672(+) A-I      intronic
chr17:37660870(+) A-I      intronic
chr17:37660877(+) A-I      intronic
chr17:37652752(+) A-I      intronic
chr17:37679145(+) A-I      intronic
chr17:37635414(+) A-I      intronic
chr17:37642467(+) A-I      intronic
chr17:37636764(+) A-I      intronic
chr17:37666172(+) A-I      intronic
chr17:37652832(+) A-I      intronic
chr17:37663786(+) A-I      intronic
chr17:37642089(+) A-I      intronic
chr17:37660953(+) A-I      intronic
chr17:37636751(+) A-I      intronic
chr17:37679051(+) A-I      intronic
chr17:37680107(+) A-I      intronic
chr17:37661245(+) A-I      intronic
chr17:37651917(+) A-I      intronic
chr17:37645267(+) A-I      intronic
chr17:37644407(+) A-I      intronic
chr17:37663311(+) A-I      intronic
chr17:37660985(+) A-I      intronic
chr17:37622322(+) A-I      intronic
chr17:37652833(+) A-I      intronic
chr17:37679981(+) A-I      intronic
chr17:37634127(+) A-I      intronic
chr17:37663702(+) A-I      intronic
chr17:37621378(+) A-I      intronic
chr17:37666928(+) A-I      intronic
chr17:37632463(+) A-I      intronic
chr17:37631675(+) A-I      intronic
chr17:37653934(+) A-I      intronic
chr17:37650430(+) A-I      intronic
chr17:37654809(+) A-I      intronic
chr17:37631253(+) A-I      intronic
chr17:37621884(+) A-I      intronic
chr17:37651206(+) A-I      intronic
chr17:37639611(+) A-I      intronic
chr17:37636349(+) A-I      intronic
chr17:37652698(+) A-I      intronic
chr17:37677047(+) A-I      intronic
chr17:37663719(+) A-I      intronic
chr17:37650367(+) A-I      intronic
chr17:37653872(+) A-I      intronic
chr17:37634411(+) A-I      intronic
chr17:37651511(+) A-I      intronic
chr17:37641597(+) A-I      intronic
chr17:37634681(+) A-I      intronic
chr17:37623504(+) A-I      intronic
chr17:37643167(+) A-I      intronic
chr17:37656736(+) A-I      intronic
chr17:37659387(+) A-I      intronic
chr17:37630803(+) A-I      intronic
chr17:37650138(+) A-I      intronic
chr17:37634514(+) A-I      intronic
chr17:37653637(+) A-I      intronic
chr17:37660950(+) A-I      intronic
chr17:37649840(+) A-I      intronic
chr17:37631892(+) A-I      intronic
chr17:37628366(+) A-I      intronic
chr17:37644388(+) A-I      intronic
chr17:37655947(+) A-I      intronic
chr17:37653717(+) A-I      intronic
chr17:37644254(+) A-I      intronic
chr17:37662609(+) A-I      intronic
chr17:37630652(+) A-I      intronic
chr17:37660973(+) A-I      intronic
chr17:37632614(+) A-I      intronic
chr17:37628382(+) A-I      intronic
chr17:37666971(+) A-I      intronic
chr17:37665515(+) A-I      intronic
chr17:37653698(+) A-I      intronic
chr17:37631605(+) A-I      intronic
chr17:37674185(+) A-I      intronic
chr17:37657251(+) A-I      intronic
chr17:37630768(+) A-I      intronic
chr17:37653568(+) A-I      intronic
chr17:37621840(+) A-I      intronic
chr17:37620744(+) A-I      intronic
chr17:37628767(+) A-I      intronic
chr17:37631277(+) A-I      intronic
chr17:37651355(+) A-I      intronic
chr17:37644470(+) A-I      intronic
chr17:37656591(+) A-I      intronic
chr17:37661021(+) A-I      intronic
chr17:37621844(+) A-I      intronic
chr17:37656473(+) A-I      intronic
chr17:37642270(+) A-I      intronic
chr17:37632502(+) A-I      intronic
chr17:37628402(+) A-I      intronic
chr17:37679163(+) A-I      intronic
chr17:37636656(+) A-I      intronic
chr17:37652196(+) A-I      intronic
chr17:37641169(+) A-I      intronic
chr17:37628698(+) A-I      intronic
chr17:37629982(+) A-I      intronic
chr17:37629235(+) A-I      intronic
chr17:37634944(+) A-I      intronic
chr17:37644416(+) A-I      intronic
chr17:37663219(+) A-I      intronic
chr17:37631322(+) A-I      intronic
chr17:37635298(+) A-I      intronic
chr17:37630189(+) A-I      intronic
chr17:37630118(+) A-I      intronic
chr17:37630777(+) A-I      intronic
chr17:37645291(+) A-I      intronic
chr17:37660982(+) A-I      intronic
chr17:37652365(+) A-I      intronic
chr17:37628472(+) A-I      intronic
chr17:37644049(+) A-I      intronic
chr17:37667577(+) A-I      intronic
chr17:37679630(+) A-I      intronic
chr17:37663692(+) A-I      intronic
chr17:37646467(+) A-I      intronic
chr17:37665066(+) A-I      intronic
chr17:37657189(+) A-I      intronic
chr17:37665057(+) A-I      intronic
chr17:37680010(+) A-I      intronic
chr17:37652806(+) A-I      intronic
chr17:37663283(+) A-I      intronic
chr17:37643186(+) A-I      intronic
chr17:37659406(+) A-I      intronic
chr17:37659271(+) A-I      intronic
chr17:37653912(+) A-I      intronic
chr17:37652346(+) A-I      intronic
chr17:37635300(+) A-I      intronic
chr17:37632565(+) A-I      intronic
chr17:37633045(+) A-I      intronic
chr17:37638113(+) A-I      intronic
chr17:37661303(+) A-I      intronic
chr17:37679185(+) A-I      intronic
chr17:37621352(+) A-I      intronic
chr17:37653716(+) A-I      intronic
chr17:37633068(+) A-I      intronic
chr17:37639186(+) A-I      intronic
chr17:37646499(+) A-I      intronic
chr17:37628422(+) A-I      intronic
chr17:37651460(+) A-I      intronic
chr17:37621804(+) A-I      intronic
chr17:37628484(+) A-I      intronic
chr17:37662633(+) A-I      intronic
chr17:37659603(+) A-I      intronic
chr17:37663761(+) A-I      intronic
chr17:37653284(+) A-I      intronic
chr17:37635944(+) A-I      intronic
chr17:37651841(+) A-I      intronic
chr17:37622482(+) A-I      intronic
chr17:37659295(+) A-I      intronic
chr17:37621927(+) A-I      intronic
chr17:37634574(+) A-I      intronic
chr17:37637643(+) A-I      intronic
chr17:37632492(+) A-I      intronic
chr17:37622327(+) A-I      intronic
chr17:37652454(+) A-I      intronic
chr17:37663267(+) A-I      intronic
chr17:37640253(+) A-I      intronic
chr17:37651789(+) A-I      intronic
chr17:37652909(+) A-I      intronic
chr17:37646365(+) A-I      intronic
chr17:37650106(+) A-I      intronic
chr17:37660907(+) A-I      intronic
chr17:37621881(+) A-I      intronic
chr17:37628420(+) A-I      intronic
chr17:37631204(+) A-I      intronic
chr17:37657092(+) A-I      intronic
chr17:37642784(+) A-I      intronic
chr17:37653676(+) A-I      intronic
chr17:37630206(+) A-I      intronic
chr17:37646364(+) A-I      intronic
chr17:37628780(+) A-I      intronic
chr17:37622511(+) A-I      intronic
chr17:37655950(+) A-I      intronic
chr17:37630023(+) A-I      intronic
chr17:37662533(+) A-I      intronic
chr17:37631911(+) A-I      intronic
chr17:37629831(+) A-I      intronic
chr17:37652792(+) A-I      intronic
chr17:37621907(+) A-I      intronic
chr17:37657224(+) A-I      intronic
chr17:37629280(+) A-I      intronic
chr17:37631622(+) A-I      intronic
chr17:37631523(+) A-I      intronic
chr17:37648190(+) A-I      intronic
chr17:37662520(+) A-I      intronic
chr17:37632480(+) A-I      intronic
chr17:37645148(+) A-I      intronic
chr17:37654804(+) A-I      intronic
chr17:37660931(+) A-I      intronic
chr17:37655591(+) A-I      intronic
chr17:37644389(+) A-I      intronic
chr17:37666074(+) A-I      intronic
chr17:37635446(+) A-I      intronic
chr17:37652426(+) A-I      intronic
chr17:37635017(+) A-I      intronic
chr17:37684220(+) A-I      intronic
chr17:37641325(+) A-I      intronic
chr17:37631665(+) A-I      intronic
chr17:37621451(+) A-I      intronic
chr17:37653539(+) A-I      intronic
chr17:37656001(+) A-I      intronic
chr17:37659455(+) A-I      intronic
chr17:37663211(+) A-I      intronic
chr17:37661229(+) A-I      intronic
chr17:37653635(+) A-I      intronic
chr17:37622020(+) A-I      intronic
chr17:37635440(+) A-I      intronic
chr17:37646569(+) A-I      intronic
chr17:37631508(+) A-I      intronic
chr17:37653685(+) A-I      intronic
chr17:37628765(+) A-I      intronic
chr17:37678757(+) A-I      intronic
chr17:37644417(+) A-I      intronic
chr17:37663739(+) A-I      intronic
chr17:37630711(+) A-I      intronic
chr17:37661012(+) A-I      intronic
chr17:37636357(+) A-I      intronic
chr17:37663585(+) A-I      intronic
chr17:37676866(+) A-I      intronic
chr17:37634627(+) A-I      intronic
chr17:37679044(+) A-I      intronic
chr17:37620745(+) A-I      intronic
chr17:37650164(+) A-I      intronic
chr17:37634033(+) A-I      intronic
chr17:37644380(+) A-I      intronic
chr17:37632085(+) A-I      intronic
chr17:37659506(+) A-I      intronic
chr17:37659528(+) A-I      intronic
chr17:37653541(+) A-I      intronic
chr17:37648878(+) A-I      intronic
chr17:37638431(+) A-I      intronic
chr17:37680052(+) A-I      intronic
chr17:37662737(+) A-I      intronic
chr17:37653955(+) A-I      intronic
chr17:37679144(+) A-I      intronic
chr17:37653631(+) A-I      intronic
chr17:37663584(+) A-I      intronic
chr17:37625146(+) A-I      intronic
chr17:37662549(+) A-I      intronic
chr17:37653880(+) A-I      intronic
chr17:37637386(+) A-I      intronic
chr17:37631288(+) A-I      intronic
chr17:37656373(+) A-I      intronic
chr17:37630230(+) A-I      intronic
chr17:37631507(+) A-I      intronic
chr17:37659264(+) A-I      intronic
chr17:37660967(+) A-I      intronic
chr17:37649326(+) A-I      intronic
chr17:37622788(+) A-I      intronic
chr17:37634647(+) A-I      intronic
chr17:37631323(+) A-I      intronic
chr17:37632543(+) A-I      intronic
chr17:37630665(+) A-I      intronic
chr17:37679545(+) A-I      intronic
chr17:37633403(+) A-I      intronic
chr17:37635928(+) A-I      intronic
chr17:37628499(+) A-I      intronic
chr17:37649445(+) A-I      intronic
chr17:37652304(+) A-I      intronic
chr17:37643007(+) A-I      intronic
chr17:37679591(+) A-I      intronic
chr17:37630789(+) A-I      intronic
chr17:37651566(+) A-I      intronic
chr17:37665018(+) A-I      intronic
chr17:37629921(+) A-I      intronic
chr17:37628403(+) A-I      intronic
chr17:37643949(+) A-I      intronic
chr17:37631544(+) A-I      intronic
chr17:37639785(+) A-I      intronic
chr17:37632771(+) A-I      intronic
chr17:37662501(+) A-I      intronic
chr17:37663384(+) A-I      intronic
chr17:37678788(+) A-I      intronic
chr17:37622481(+) A-I      intronic
chr17:37652438(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED CDK12
chr17:37635017(+) A-G intron -    22484847
chr17:37639611(+) A-G intron -    22484847
chr17:37651460(+) A-G intron -    22484847
chr17:37659247(+) A-G intron -    22484847
chr17:37660950(+) A-G intron -    22484847
chr17:37660981(+) A-G intron -    22484847
chr17:37679144(+) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase CDK12
chr17:37617850-37617851(+) m6A 5'UTR       24284625//24209618//25456834//24981863//22575960//22608085
chr17:37617908-37617909(+) m6A 5'UTR       24284625//24209618//25456834//24981863//27371828//22575960//22608085
chr17:37618008-37618009(+) m6A 5'UTR       24284625//24209618//25456834//24981863//22575960//22608085
chr17:37618033-37618034(+) m6A 5'UTR       24284625//24209618//25456834//24981863//22575960//22608085
chr17:37618060-37618061(+) m6A 5'UTR       24284625//24209618//25456834//24981863//22575960//22608085
chr17:37618107-37618108(+) m6A 5'UTR       24284625//24209618//25456834//24981863//22575960//22608085
chr17:37618290-37618291(+) m6A 5'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr17:37618341-37618342(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr17:37618381-37618382(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr17:37618467-37618468(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr17:37618478-37618479(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr17:37618527-37618528(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr17:37618593-37618594(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr17:37618598-37618599(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr17:37618628-37618629(+) Cm CDS       -
chr17:37618653-37618654(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr17:37618685-37618686(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr17:37618701-37618702(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr17:37618757-37618758(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr17:37618795-37618796(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr17:37618873-37618874(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr17:37618910-37618911(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr17:37618939-37618940(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr17:37618957-37618958(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr17:37618964-37618965(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr17:37619019-37619020(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr17:37627176-37627177(+) m6A CDS       24284625//24209618//24981863//22608085
chr17:37627278-37627279(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr17:37627379-37627380(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr17:37627467-37627468(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr17:37627490-37627491(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr17:37627541-37627542(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr17:37627562-37627563(+) Am CDS       -
chr17:37627582-37627583(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr17:37627589-37627590(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr17:37627596-37627597(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr17:37627636-37627637(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr17:37627642-37627643(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr17:37627657-37627658(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr17:37627726-37627727(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22608085
chr17:37627858-37627859(+) m6A CDS//exon       24284625//24209618//24981863//22608085
chr17:37627915-37627916(+) m6A CDS//exon       24284625//24209618//24981863//22608085
chr17:37627954-37627955(+) m6A CDS//exon       24284625//24209618//24981863//22608085
chr17:37646819-37646820(+) m6A CDS//intron       24284625//24981863//22608085
chr17:37646833-37646834(+) m6A CDS//intron       24284625//24981863//22608085
chr17:37646854-37646855(+) m6A CDS//intron       24284625//24981863
chr17:37646861-37646862(+) m6A CDS//intron       24284625//24981863
chr17:37646880-37646881(+) m6A CDS//intron       24284625//24981863
chr17:37646928-37646929(+) m6A CDS//intron       24284625//24981863
chr17:37646938-37646939(+) m6A CDS//intron       24284625//24981863
chr17:37646980-37646981(+) m6A CDS//intron       24284625//24981863//27773535
chr17:37649033-37649034(+) m6A CDS//exon       24284625//24981863//27773535
chr17:37649037-37649038(+) m6A CDS//exon       24981863
chr17:37649068-37649069(+) m6A CDS//exon       24981863//27773535
chr17:37649103-37649104(+) m6A CDS//exon       24981863//27773535
chr17:37649131-37649132(+) m6A CDS//exon       24981863//27773535
chr17:37649137-37649138(+) m6A CDS//exon       24981863//27773535
chr17:37650780-37650781(+) m6A CDS//exon       24981863//27773535
chr17:37650804-37650805(+) m6A CDS//exon       24981863
chr17:37650809-37650810(+) m6A CDS//exon       24981863
chr17:37681023-37681024(+) m6A CDS       24284625
chr17:37681038-37681039(+) m6A CDS       24284625
chr17:37681050-37681051(+) m6A CDS       24284625
chr17:37681072-37681073(+) m6A CDS       24284625
chr17:37682170-37682171(+) m6A CDS       24284625
chr17:37682187-37682188(+) m6A CDS       24284625//22608085
chr17:37682269-37682270(+) m6A CDS       24284625//25456834//24981863//22608085
chr17:37682314-37682315(+) m6A CDS       24284625//24209618//25456834//24981863//22608085
chr17:37682322-37682323(+) m6A CDS       24284625//24209618//25456834//24981863//22608085
chr17:37682387-37682388(+) m6A CDS       24284625//24209618//25456834//24981863//22608085
chr17:37682466-37682467(+) m6A CDS       24284625//24209618//25456834//24981863//22608085
chr17:37682497-37682498(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr17:37682512-37682513(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr17:37682538-37682539(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr17:37686157-37686158(+) m6A exon//intron       24284625//24209618//25456834//24981863//22575960//22608085
chr17:37686247-37686248(+) m6A exon//intron       24284625
chr17:37686908-37686909(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//22575960
chr17:37686976-37686977(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//22575960//22608085
chr17:37687067-37687068(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr17:37687099-37687100(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr17:37687104-37687105(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr17:37687114-37687115(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr17:37687131-37687132(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr17:37687165-37687166(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr17:37687200-37687201(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr17:37687213-37687214(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr17:37687218-37687219(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr17:37687294-37687295(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//22575960//22608085
chr17:37687300-37687301(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//22575960//22608085
chr17:37687398-37687399(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr17:37687411-37687412(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr17:37687434-37687435(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr17:37687505-37687506(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr17:37687576-37687577(+) m6A 3'UTR//exon//intron       24284625//24209618//24981863//22608085
chr17:37702896-37702897(+) m6A 3'UTR//exon       -
chr17:37702908-37702909(+) m6A 3'UTR//exon       -
chr17:37702964-37702965(+) m6A 3'UTR       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-30c-2-3p
Exosome B cell line (Raji)|Jurkat-derived T cell line (J77cl20)     21505438
Exosome Plasma     23663360
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Seminal plasma     23539611
Microvesicle Serum     24797360
Microvesicle Fibroblasts|Mesenchymal stem cells     -
Mitochondrion Cell line (HEK-293|HeLa)     22984580
CDK12
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HCC cell line (HepG2)     -
Exosome Blood     -
Insoluble cytoplasm HCC cell line (HepG2)|K562 cells     -
Membrane HCC cell line (HepG2)     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus Colon cancer cells     24393600
Nucleus HeLa-S3 cells|K562 cells     -

Related Drug Information:


Resource Symbol Drug Name PubChem
ID
Function Link  
RNAInter hsa-miR-30c-2-3p
Gemcitabine 60750 Drug interaction    RC00006870
Eloxatine 5310940 Drug interaction    RC00006871
5-Fluorouracil 3385 Drug interaction    RC00006869
Resource Symbol Drug Name PubChem ID PMID
NoncoRNA hsa-miR-30c-2-3p

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-30c-2-3p
Interactor2: CDK12

Evidence Support:


Weak-Evidence PAR-CLIP
Support Database ViRBase

References:


PMID 22291592 Target region 3'UTR
Source ViRBase Interactor1 expression None
Tissue or cell line EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells Interactor2 expression None
Description We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.

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