Detail Information

Basic Information:


  VIRBase ID:  

HHID00064850

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-30c-2-3p:           PICALM:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-30c-2-3p PICALM
miRBase
Accession/Entrez ID
MIMAT0004550 8301
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - CALM//CLTH//LAP

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-30c-2-3p
rs1262929323 chr6:71376964    A/G
rs1413659455 chr6:71376968    T/C
rs1421032991 chr6:71376975    C/A
rs1421032991 chr6:71376975    C/G
rs1488181071 chr6:71376967    G/T
rs747913643 chr6:71376976    C/A
rs760276048 chr6:71376974    G/C
rs775896072 chr6:71376969    A/G

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR PICALM
chr11:85743420(-) A-I      intronic
chr11:85743421(-) A-I      intronic
chr11:85743480(-) A-I      intronic
chr11:85670790(-) A-I      intronic
chr11:85681802(-) A-I      intronic
chr11:85721491(-) A-I      intronic
chr11:85742035(-) A-I      intronic
chr11:85764766(-) A-I      intronic
chr11:85670793(-) A-I      intronic
chr11:85690367(-) A-I      intronic
chr11:85690378(-) A-I      intronic
chr11:85690389(-) A-I      intronic
chr11:85690401(-) A-I      intronic
chr11:85690411(-) A-I      intronic
chr11:85690421(-) A-I      intronic
chr11:85692486(-) A-I      intronic
chr11:85692538(-) A-I      intronic
chr11:85692550(-) A-I      intronic
chr11:85721539(-) A-I      intronic
chr11:85740008(-) A-I      intronic
chr11:85740018(-) A-I      intronic
chr11:85740022(-) A-I      intronic
chr11:85740040(-) A-I      intronic
chr11:85740047(-) A-I      intronic
chr11:85740055(-) A-I      intronic
chr11:85740056(-) A-I      intronic
chr11:85740058(-) A-I      intronic
chr11:85740137(-) A-I      intronic
chr11:85740145(-) A-I      intronic
chr11:85740153(-) A-I      intronic
chr11:85743419(-) A-I      intronic
chr11:85746907(-) A-I      intronic
chr11:85739978(-) A-I      intronic
chr11:85719551(-) A-I      intronic
chr11:85770688(-) A-I      intronic
chr11:85670826(-) A-I      intronic
chr11:85681723(-) A-I      intronic
chr11:85738762(-) A-I      intronic
chr11:85681729(-) A-I      intronic
chr11:85670354(-) A-I      intronic
chr11:85766260(-) A-I      intronic
chr11:85766169(-) A-I      intronic
chr11:85670342(-) A-I      intronic
chr11:85750070(-) A-I      intronic
chr11:85683019(-) A-I      intronic
chr11:85681727(-) A-I      intronic
chr11:85682657(-) A-I      intronic
chr11:85670552(-) A-I      intronic
chr11:85766156(-) A-I      intronic
chr11:85765974(-) A-I      intronic
chr11:85765970(-) A-I      intronic
chr11:85765930(-) A-I      intronic
chr11:85765859(-) A-I      intronic
chr11:85764891(-) A-I      intronic
chr11:85764852(-) A-I      intronic
chr11:85740039(-) A-I      intronic
chr11:85757786(-) A-I      intronic
chr11:85670738(-) A-I      intronic
chr11:85764707(-) A-I      intronic
chr11:85736794(-) A-I      intronic
chr11:85670436(-) A-I      intronic
chr11:85719408(-) A-I      intronic
chr11:85709097(-) A-I      intronic
chr11:85764702(-) A-I      intronic
chr11:85764695(-) A-I      intronic
chr11:85764688(-) A-I      intronic
chr11:85740105(-) A-I      intronic
chr11:85762646(-) A-I      intronic
chr11:85762485(-) A-I      intronic
chr11:85757953(-) A-I      intronic
chr11:85757931(-) A-I      intronic
chr11:85757930(-) A-I      intronic
chr11:85757929(-) A-I      intronic
chr11:85751044(-) A-I      intronic
chr11:85750924(-) A-I      intronic
chr11:85748673(-) A-I      intronic
chr11:85748641(-) A-I      intronic
chr11:85748573(-) A-I      intronic
chr11:85709579(-) A-I      intronic
chr11:85748572(-) A-I      intronic
chr11:85748534(-) A-I      intronic
chr11:85748505(-) A-I      intronic
chr11:85748430(-) A-I      intronic
chr11:85748385(-) A-I      intronic
chr11:85748374(-) A-I      intronic
chr11:85748369(-) A-I      intronic
chr11:85748364(-) A-I      intronic
chr11:85748362(-) A-I      intronic
chr11:85748126(-) A-I      intronic
chr11:85682520(-) A-I      intronic
chr11:85670593(-) A-I      intronic
chr11:85748099(-) A-I      intronic
chr11:85721472(-) A-I      intronic
chr11:85748085(-) A-I      intronic
chr11:85748050(-) A-I      intronic
chr11:85748025(-) A-I      intronic
chr11:85748023(-) A-I      intronic
chr11:85746728(-) A-I      intronic
chr11:85742128(-) A-I      intronic
chr11:85742116(-) A-I      intronic
chr11:85742004(-) A-I      intronic
chr11:85674905(-) A-I      intronic
chr11:85756549(-) A-I      intronic
chr11:85692461(-) A-I      intronic
chr11:85741912(-) A-I      intronic
chr11:85740132(-) A-I      intronic
chr11:85740063(-) A-I      intronic
chr11:85740057(-) A-I      intronic
chr11:85739991(-) A-I      intronic
chr11:85738651(-) A-I      intronic
chr11:85738645(-) A-I      intronic
chr11:85736892(-) A-I      intronic
chr11:85736780(-) A-I      intronic
chr11:85736779(-) A-I      intronic
chr11:85736298(-) A-I      intronic
chr11:85735075(-) A-I      intronic
chr11:85735053(-) A-I      intronic
chr11:85741922(-) A-I      intronic
chr11:85721543(-) A-I      intronic
chr11:85721538(-) A-I      intronic
chr11:85756474(-) A-I      intronic
chr11:85721507(-) A-I      intronic
chr11:85721481(-) A-I      intronic
chr11:85721475(-) A-I      intronic
chr11:85721462(-) A-I      intronic
chr11:85721417(-) A-I      intronic
chr11:85720653(-) A-I      intronic
chr11:85720652(-) A-I      intronic
chr11:85720254(-) A-I      intronic
chr11:85720214(-) A-I      intronic
chr11:85683107(-) A-I      intronic
chr11:85720212(-) A-I      intronic
chr11:85720192(-) A-I      intronic
chr11:85709427(-) A-I      intronic
chr11:85721656(-) A-I      intronic
chr11:85720168(-) A-I      intronic
chr11:85756444(-) A-I      intronic
chr11:85719514(-) A-I      intronic
chr11:85719483(-) A-I      intronic
chr11:85719451(-) A-I      intronic
chr11:85719404(-) A-I      intronic
chr11:85717524(-) A-I      intronic
chr11:85736279(-) A-I      intronic
chr11:85717520(-) A-I      intronic
chr11:85717424(-) A-I      intronic
chr11:85717416(-) A-I      intronic
chr11:85740048(-) A-I      intronic
chr11:85709815(-) A-I      intronic
chr11:85709739(-) A-I      intronic
chr11:85670528(-) A-I      intronic
chr11:85709618(-) A-I      intronic
chr11:85709601(-) A-I      intronic
chr11:85670513(-) A-I      intronic
chr11:85709573(-) A-I      intronic
chr11:85708751(-) A-I      intronic
chr11:85736276(-) A-I      intronic
chr11:85708746(-) A-I      intronic
chr11:85708630(-) A-I      intronic
chr11:85708625(-) A-I      intronic
chr11:85708599(-) A-I      intronic
chr11:85736783(-) A-I      intronic
chr11:85720253(-) A-I      intronic
chr11:85708581(-) A-I      intronic
chr11:85692614(-) A-I      intronic
chr11:85692612(-) A-I      intronic
chr11:85692523(-) A-I      intronic
chr11:85692519(-) A-I      intronic
chr11:85692492(-) A-I      intronic
chr11:85692457(-) A-I      intronic
chr11:85670484(-) A-I      intronic
chr11:85683117(-) A-I      intronic
chr11:85683004(-) A-I      intronic
chr11:85683003(-) A-I      intronic
chr11:85682963(-) A-I      intronic
chr11:85682853(-) A-I      intronic
chr11:85682757(-) A-I      intronic
chr11:85682662(-) A-I      intronic
chr11:85690276(-) A-I      intronic
chr11:85760998(-) A-I      intronic
chr11:85670783(-) A-I      intronic
chr11:85682696(-) A-I      intronic
chr11:85682773(-) A-I      intronic
chr11:85709445(-) A-I      intronic
chr11:85683027(-) A-I      intronic
chr11:85721564(-) A-I      intronic
chr11:85670842(-) A-I      intronic
chr11:85720273(-) A-I      intronic
chr11:85670428(-) A-I      intronic
chr11:85767078(-) A-I      intronic
chr11:85761016(-) A-I      intronic
chr11:85670479(-) A-I      intronic
chr11:85719649(-) A-I      intronic
chr11:85670751(-) A-I      intronic
chr11:85764809(-) A-I      intronic
chr11:85670792(-) A-I      intronic
chr11:85766272(-) A-I      intronic
chr11:85766170(-) A-I      intronic
chr11:85670836(-) A-I      intronic
chr11:85764724(-) A-I      intronic
chr11:85719506(-) A-I      intronic
chr11:85736409(-) A-I      intronic
chr11:85772186(-) A-I      intronic
chr11:85676984(-) A-I      intronic
chr11:85686751(-) A-I      intronic
chr11:85741965(-) A-I      intronic
chr11:85735128(-) A-I      intronic
chr11:85721534(-) A-I      intronic
chr11:85720130(-) A-I      intronic
chr11:85709327(-) A-I      intronic
chr11:85736777(-) A-I      intronic
chr11:85767056(-) A-I      intronic
chr11:85721498(-) A-I      intronic
chr11:85670414(-) A-I      intronic
chr11:85682587(-) A-I      intronic
chr11:85750444(-) A-I      intronic
chr11:85766263(-) A-I      intronic
chr11:85682596(-) A-I      intronic
chr11:85708611(-) A-I      intronic
chr11:85743429(-) A-I      intronic
chr11:85671947(-) A-I      intronic
chr11:85762502(-) A-I      intronic
chr11:85742078(-) A-I      intronic
chr11:85738813(-) A-I      intronic
chr11:85721548(-) A-I      intronic
chr11:85762651(-) A-I      intronic
chr11:85709764(-) A-I      intronic
chr11:85765929(-) A-I      intronic
chr11:85670761(-) A-I      intronic
chr11:85721547(-) A-I      intronic
chr11:85748657(-) A-I      intronic
chr11:85686833(-) A-I      intronic
chr11:85757952(-) A-I      intronic
chr11:85683001(-) A-I      intronic
chr11:85677364(-) A-I      intronic
chr11:85760124(-) A-I      intronic
chr11:85670560(-) A-I      intronic
chr11:85765903(-) A-I      intronic
chr11:85670818(-) A-I      intronic
chr11:85679159(-) A-I      intronic
chr11:85670493(-) A-I      intronic
chr11:85766289(-) A-I      intronic
chr11:85670755(-) A-I      intronic
chr11:85719500(-) A-I      intronic
chr11:85742038(-) A-I      intronic
chr11:85721573(-) A-I      intronic
chr11:85703137(-) A-I      intronic
chr11:85708652(-) A-I      intronic
chr11:85738842(-) A-I      intronic
chr11:85682922(-) A-I      intronic
chr11:85721620(-) A-I      intronic
chr11:85760725(-) A-I      intronic
chr11:85670341(-) A-I      intronic
chr11:85748259(-) A-I      intronic
chr11:85762537(-) A-I      intronic
chr11:85692483(-) A-I      intronic
chr11:85743635(-) A-I      intronic
chr11:85738838(-) A-I      intronic
chr11:85721397(-) A-I      intronic
chr11:85738789(-) A-I      intronic
chr11:85720696(-) A-I      intronic
chr11:85736738(-) A-I      intronic
chr11:85709052(-) A-I      intronic
chr11:85736857(-) A-I      intronic
chr11:85670496(-) A-I      intronic
chr11:85709709(-) A-I      intronic
chr11:85750856(-) A-I      intronic
chr11:85735120(-) A-I      intronic
chr11:85682667(-) A-I      intronic
chr11:85747914(-) A-I      intronic
chr11:85686819(-) A-I      intronic
chr11:85760997(-) A-I      intronic
chr11:85719420(-) A-I      intronic
chr11:85740154(-) A-I      intronic
chr11:85682710(-) A-I      intronic
chr11:85738771(-) A-I      intronic
chr11:85682992(-) A-I      intronic
chr11:85768469(-) A-I      intronic
chr11:85742154(-) A-I      intronic
chr11:85709913(-) A-I      intronic
chr11:85709251(-) A-I      intronic
chr11:85709910(-) A-I      intronic
chr11:85721467(-) A-I      intronic
chr11:85682999(-) A-I      intronic
chr11:85739976(-) A-I      intronic
chr11:85770692(-) A-I      intronic
chr11:85702361(-) A-I      intronic
chr11:85750031(-) A-I      intronic
chr11:85765952(-) A-I      intronic
chr11:85709807(-) A-I      intronic
chr11:85720478(-) A-I      intronic
chr11:85721615(-) A-I      intronic
chr11:85750122(-) A-I      intronic
chr11:85736274(-) A-I      intronic
chr11:85670554(-) A-I      intronic
chr11:85679156(-) A-I      intronic
chr11:85748689(-) A-I      intronic
chr11:85670734(-) A-I      intronic
chr11:85681687(-) A-I      intronic
chr11:85748260(-) A-I      intronic
chr11:85670791(-) A-I      intronic
chr11:85748708(-) A-I      intronic
chr11:85670747(-) A-I      intronic
chr11:85719541(-) A-I      intronic
chr11:85682923(-) A-I      intronic
chr11:85765916(-) A-I      intronic
chr11:85748064(-) A-I      intronic
chr11:85765898(-) A-I      intronic
chr11:85683002(-) A-I      intronic
chr11:85709643(-) A-I      intronic
chr11:85709926(-) A-I      intronic
chr11:85762591(-) A-I      intronic
chr11:85721530(-) A-I      intronic
chr11:85740160(-) A-I      intronic
chr11:85682743(-) A-I      intronic
chr11:85670895(-) A-I      intronic
chr11:85709426(-) A-I      intronic
chr11:85756538(-) A-I      intronic
chr11:85682516(-) A-I      intronic
chr11:85757974(-) A-I      intronic
chr11:85721508(-) A-I      intronic
chr11:85680799(-) A-I      intronic
chr11:85760721(-) A-I      intronic
chr11:85721549(-) A-I      intronic
chr11:85670896(-) A-I      intronic
chr11:85757923(-) A-I      intronic
chr11:85670824(-) A-I      intronic
chr11:85760726(-) A-I      intronic
chr11:85670879(-) A-I      intronic
chr11:85670441(-) A-I      intronic
chr11:85682947(-) A-I      intronic
chr11:85740049(-) A-I      intronic
chr11:85748214(-) A-I      intronic
chr11:85748702(-) A-I      intronic
chr11:85760770(-) A-I      intronic
chr11:85709738(-) A-I      intronic
chr11:85736199(-) A-I      intronic
chr11:85766138(-) A-I      intronic
chr11:85740017(-) A-I      intronic
chr11:85760748(-) A-I      intronic
chr11:85741939(-) A-I      intronic
chr11:85709252(-) A-I      intronic
chr11:85739941(-) A-I      intronic
chr11:85761989(-) A-I      intronic
chr11:85709721(-) A-I      intronic
chr11:85736868(-) A-I      intronic
chr11:85746903(-) A-I      intronic
chr11:85748399(-) A-I      intronic
chr11:85717541(-) A-I      intronic
chr11:85703400(-) A-I      intronic
chr11:85739977(-) A-I      intronic
chr11:85748215(-) A-I      intronic
chr11:85709591(-) A-I      intronic
chr11:85682931(-) A-I      intronic
chr11:85761012(-) A-I      intronic
chr11:85762627(-) A-I      intronic
chr11:85721638(-) A-I      intronic
chr11:85690370(-) A-I      intronic
chr11:85682504(-) A-I      intronic
chr11:85747926(-) A-I      intronic
chr11:85683099(-) A-I      intronic
chr11:85736778(-) A-I      intronic
chr11:85709811(-) A-I      intronic
chr11:85736865(-) A-I      intronic
chr11:85670312(-) A-I      intronic
chr11:85682522(-) A-I      intronic
chr11:85764877(-) A-I      intronic
chr11:85742158(-) A-I      intronic
chr11:85720127(-) A-I      intronic
chr11:85740167(-) A-I      intronic
chr11:85686778(-) A-I      intronic
chr11:85756475(-) A-I      intronic
chr11:85748640(-) A-I      intronic
chr11:85738814(-) A-I      intronic
chr11:85709653(-) A-I      intronic
chr11:85762520(-) A-I      intronic
chr11:85670787(-) A-I      intronic
chr11:85742005(-) A-I      intronic
chr11:85719579(-) A-I      intronic
chr11:85670510(-) A-I      intronic
chr11:85735115(-) A-I      intronic
chr11:85682716(-) A-I      intronic
chr11:85670491(-) A-I      intronic
chr11:85717659(-) A-I      intronic
chr11:85762620(-) A-I      intronic
chr11:85736439(-) A-I      intronic
chr11:85670841(-) A-I      intronic
chr11:85719497(-) A-I      intronic
chr11:85679134(-) A-I      intronic
chr11:85741940(-) A-I      intronic
chr11:85719475(-) A-I      intronic
chr11:85742077(-) A-I      intronic
chr11:85708610(-) A-I      intronic
chr11:85736200(-) A-I      intronic
chr11:85708786(-) A-I      intronic
chr11:85719617(-) A-I      intronic
chr11:85747887(-) A-I      intronic
chr11:85720260(-) A-I      intronic
chr11:85721566(-) A-I      intronic
chr11:85759694(-) A-I      intronic
chr11:85682741(-) A-I      intronic
chr11:85708549(-) A-I      intronic
chr11:85762003(-) A-I      intronic
chr11:85748714(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED PICALM
chr11:85670436(-) A-I intron -    15342557
chr11:85670479(-) A-I intron -    15342557
chr11:85670491(-) A-I intron -    15342557
chr11:85670493(-) A-I intron -    15342557
chr11:85670496(-) A-I intron -    15342557
chr11:85670552(-) A-I intron -    15342557
chr11:85670554(-) A-I intron -    15342557
chr11:85670560(-) A-I intron -    15342557
chr11:85670747(-) A-I intron -    15342557
chr11:85670755(-) A-I intron -    15342557
chr11:85670761(-) A-I intron -    15342557
chr11:85670783(-) A-I intron -    15342557
chr11:85670818(-) A-I intron -    15342557
chr11:85670824(-) A-I intron -    15342557   //21960545
chr11:85670836(-) A-I intron -    15342557
chr11:85670842(-) A-I intron -    15342557   //22327324
chr11:85670895(-) A-I intron -    15342557
chr11:85670896(-) A-I intron -    15342557
chr11:85671947(-) A-I intron -    15342557
chr11:85672522(-) A-I intron -    15342557
chr11:85670493(-) A-G intron -    22484847
chr11:85670824(-) A-G intron -    22484847
chr11:85670842(-) A-G intron -    22484847
chr11:85676863(-) A-C intron -    22484847
chr11:85682667(-) A-G intron -    22484847
chr11:85682743(-) A-G intron -    22484847
chr11:85703327(-) C-A intron -    22484847
chr11:85708652(-) A-G intron -    22484847
chr11:85719497(-) A-G intron -    22484847
chr11:85719500(-) A-G intron -    22484847
chr11:85719506(-) A-G intron -    22484847
chr11:85739976(-) A-G intron -    22484847
chr11:85739978(-) A-G intron -    22484847
chr11:85766272(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase PICALM
chr11:85668940-85668941(-) m6A 3'UTR       26404942
chr11:85669564-85669565(-) m6A 3'UTR       26404942
chr11:85669622-85669623(-) m6A 3'UTR       26404942
chr11:85669698-85669699(-) m6A 3'UTR       24981863//26404942//27773535//22608085
chr11:85669726-85669727(-) m6A 3'UTR       24284625//24981863//26404942//27773535//22608085
chr11:85669864-85669865(-) m6A 3'UTR//exon       24284625//24981863//26404942//27773535//22608085
chr11:85669925-85669926(-) m6A 3'UTR//exon       24284625//24981863//26404942//27773535//22608085
chr11:85669986-85669987(-) m6A 3'UTR//exon       24284625//24981863//26404942//27773535//22608085
chr11:85670010-85670011(-) m6A 3'UTR//exon       24284625//24981863//26404942//27773535//22608085
chr11:85670054-85670055(-) m6A 3'UTR//exon       24284625//24981863//26404942//22608085
chr11:85685778-85685779(-) m6A 3'UTR//CDS//exon//intron       27773535
chr11:85685786-85685787(-) m6A 3'UTR//CDS//exon//intron       27773535
chr11:85687782-85687783(-) m6A exon//intron       27773535
chr11:85687804-85687805(-) m6A exon//intron       27773535
chr11:85711792-85711793(-) m6A 3'UTR//CDS       26404942
chr11:85711804-85711805(-) m6A 3'UTR//CDS       26404942
chr11:85711819-85711820(-) m6A 3'UTR//CDS       26404942
chr11:85712101-85712102(-) m6A 3'UTR//CDS//exon       26404942
chr11:85723420-85723421(-) m6A 3'UTR//CDS//exon       24981863
chr11:85725959-85725960(-) m6A 3'UTR//CDS//exon       24981863
chr11:85725969-85725970(-) m6A 3'UTR//CDS//exon       24981863
chr11:85725979-85725980(-) m6A 3'UTR//CDS//exon       24981863
chr11:85725986-85725987(-) m6A 3'UTR//CDS//exon       24981863
chr11:85733444-85733445(-) m6A 3'UTR//CDS//exon//intron       24981863//27773535
chr11:85734509-85734510(-) m6A exon//intron       27773535
chr11:85734518-85734519(-) m6A exon//intron       27773535
chr11:85779694-85779695(-) m6A CDS//exon//intron       -
chr11:85779749-85779750(-) m6A 5'UTR//CDS//exon//intron       -
chr11:85779799-85779800(-) m6A CDS//intron       24284625//27773535//27773536
chr11:85779892-85779893(-) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//27371828//27773536//22608085
chr11:85779958-85779959(-) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr11:85779982-85779983(-) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr11:85780054-85780055(-) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-30c-2-3p
Exosome B cell line (Raji)|Jurkat-derived T cell line (J77cl20)     21505438
Exosome Plasma     23663360
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Seminal plasma     23539611
Microvesicle Serum     24797360
Microvesicle Fibroblasts|Mesenchymal stem cells     -
Mitochondrion Cell line (HEK-293|HeLa)     22984580
PICALM
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol K562 cells     -
Exosome Blood     -
Insoluble cytoplasm HCC cell line (HepG2)|K562 cells     -
Membrane K562 cells     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -
Ribosome Colon cancer cells     24393600

Related Drug Information:


Resource Symbol Drug Name PubChem
ID
Function Link  
RNAInter hsa-miR-30c-2-3p
Gemcitabine 60750 Drug interaction    RC00006870
Eloxatine 5310940 Drug interaction    RC00006871
5-Fluorouracil 3385 Drug interaction    RC00006869
Resource Symbol Drug Name PubChem ID PMID
NoncoRNA hsa-miR-30c-2-3p

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-30c-2-3p
Interactor2: PICALM

Evidence Support:


Weak-Evidence PAR-CLIP
Support Database ViRBase

References:


PMID 22291592 Target region 3'UTR
Source ViRBase Interactor1 expression None
Tissue or cell line EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells Interactor2 expression None
Description We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.

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