Detail Information

Basic Information:


  VIRBase ID:  

HHID00064028

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-101-5p:           BTAF1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-101-5p BTAF1
miRBase
Accession/Entrez ID
MIMAT0004513 9044
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - MOT1//TAF(II)170//TAF172//TAFII170

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-101-5p
rs1200170859 chr1:65058478    G/C
rs548109012 chr1:65058477    A/G
rs548109012 chr1:65058477    A/T
rs1235943983 chr1:65058493    T/C
rs746487797 chr1:65058492    A/G
rs777575128 chr1:65058491    G/C
rs777575128 chr1:65058491    G/T

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR BTAF1
chr10:93713370(+) A-I      intronic
chr10:93688274(+) A-I      intronic
chr10:93764448(+) A-I      intronic
chr10:93759334(+) A-I      intronic
chr10:93714418(+) A-I      intronic
chr10:93717885(+) A-I      intronic
chr10:93717886(+) A-I      intronic
chr10:93717899(+) A-I      intronic
chr10:93713305(+) A-I      intronic
chr10:93712067(+) A-I      intronic
chr10:93686411(+) A-I      intronic
chr10:93706683(+) A-I      intronic
chr10:93764249(+) A-I      intronic
chr10:93713353(+) A-I      intronic
chr10:93713329(+) A-I      intronic
chr10:93713349(+) A-I      intronic
chr10:93713352(+) A-I      intronic
chr10:93713311(+) A-I      intronic
chr10:93713321(+) A-I      intronic
chr10:93713322(+) A-I      intronic
chr10:93717935(+) A-I      intronic
chr10:93765668(+) A-I      intronic
chr10:93688270(+) A-I      intronic
chr10:93688292(+) A-I      intronic
chr10:93784186(+) A-I      intronic
chr10:93783518(+) A-I      intronic
chr10:93783321(+) A-I      intronic
chr10:93783242(+) A-I      intronic
chr10:93783231(+) A-I      intronic
chr10:93783522(+) A-I      intronic
chr10:93783190(+) A-I      intronic
chr10:93767155(+) A-I      intronic
chr10:93782292(+) A-I      intronic
chr10:93758700(+) A-I      intronic
chr10:93759288(+) A-I      intronic
chr10:93779726(+) A-I      intronic
chr10:93772078(+) A-I      intronic
chr10:93765730(+) A-I      intronic
chr10:93759252(+) A-I      intronic
chr10:93765698(+) A-I      intronic
chr10:93769430(+) A-I      intronic
chr10:93762863(+) A-I      intronic
chr10:93765837(+) A-I      intronic
chr10:93718348(+) A-I      intronic
chr10:93708323(+) A-I      intronic
chr10:93765708(+) A-I      intronic
chr10:93714454(+) A-I      intronic
chr10:93722913(+) A-I      intronic
chr10:93759216(+) A-I      intronic
chr10:93757811(+) A-I      intronic
chr10:93708286(+) A-I      intronic
chr10:93783281(+) A-I      intronic
chr10:93709819(+) A-I      intronic
chr10:93765756(+) A-I      intronic
chr10:93784187(+) A-I      intronic
chr10:93717825(+) A-I      intronic
chr10:93765749(+) A-I      intronic
chr10:93765770(+) A-I      intronic
chr10:93723055(+) A-I      intronic
chr10:93757796(+) A-I      intronic
chr10:93760395(+) A-I      intronic
chr10:93708843(+) A-I      intronic
chr10:93716581(+) A-I      intronic
chr10:93708246(+) A-I      intronic
chr10:93708226(+) A-I      intronic
chr10:93708221(+) A-I      intronic
chr10:93702816(+) A-I      intronic
chr10:93700567(+) A-I      intronic
chr10:93700560(+) A-I      intronic
chr10:93700541(+) A-I      intronic
chr10:93699405(+) A-I      intronic
chr10:93699404(+) A-I      intronic
chr10:93765692(+) A-I      intronic
chr10:93699392(+) A-I      intronic
chr10:93757773(+) A-I      intronic
chr10:93765682(+) A-I      intronic
chr10:93698511(+) A-I      intronic
chr10:93698494(+) A-I      intronic
chr10:93757588(+) A-I      intronic
chr10:93708386(+) A-I      intronic
chr10:93723153(+) A-I      intronic
chr10:93765650(+) A-I      intronic
chr10:93708796(+) A-I      intronic
chr10:93710803(+) A-I      intronic
chr10:93708800(+) A-I      intronic
chr10:93708923(+) A-I      intronic
chr10:93708881(+) A-I      intronic
chr10:93759208(+) A-I      intronic
chr10:93759207(+) A-I      intronic
chr10:93758785(+) A-I      intronic
chr10:93722992(+) A-I      intronic
chr10:93708888(+) A-I      intronic
chr10:93709752(+) A-I      intronic
chr10:93759412(+) A-I      intronic
chr10:93757900(+) A-I      intronic
chr10:93762799(+) A-I      intronic
chr10:93762793(+) A-I      intronic
chr10:93718232(+) A-I      intronic
chr10:93762749(+) A-I      intronic
chr10:93762737(+) A-I      intronic
chr10:93759325(+) A-I      intronic
chr10:93758780(+) A-I      intronic
chr10:93708963(+) A-I      intronic
chr10:93757769(+) A-I      intronic
chr10:93722982(+) A-I      intronic
chr10:93716497(+) A-I      intronic
chr10:93718380(+) A-I      intronic
chr10:93709637(+) A-I      intronic
chr10:93718204(+) A-I      intronic
chr10:93760573(+) A-I      intronic
chr10:93708267(+) A-I      intronic
chr10:93708799(+) A-I      intronic
chr10:93708813(+) A-I      intronic
chr10:93729600(+) A-I      intronic
chr10:93759297(+) A-I      intronic
chr10:93762833(+) A-I      intronic
chr10:93782314(+) A-I      intronic
chr10:93761601(+) A-I      intronic
chr10:93709654(+) A-I      intronic
chr10:93759317(+) A-I      intronic
chr10:93765788(+) A-I      intronic
chr10:93761641(+) A-I      intronic
chr10:93709664(+) A-I      intronic
chr10:93758769(+) A-I      intronic
chr10:93757815(+) A-I      intronic
chr10:93708247(+) A-I      intronic
chr10:93717856(+) A-I      intronic
chr10:93762873(+) A-I      intronic
chr10:93708373(+) A-I      intronic
chr10:93717861(+) A-I      intronic
chr10:93758636(+) A-I      intronic
chr10:93761636(+) A-I      intronic
chr10:93714505(+) A-I      intronic
chr10:93758740(+) A-I      intronic
chr10:93759384(+) A-I      intronic
chr10:93722981(+) A-I      intronic
chr10:93710830(+) A-I      intronic
chr10:93710687(+) A-I      intronic
chr10:93709660(+) A-I      intronic
chr10:93784227(+) A-I      intronic
chr10:93718410(+) A-I      intronic
chr10:93708344(+) A-I      intronic
chr10:93705973(+) A-I      intronic
chr10:93762807(+) A-I      intronic
chr10:93728644(+) A-I      intronic
chr10:93783675(+) A-I      intronic
chr10:93701920(+) A-I      intronic
chr10:93731368(+) A-I      intronic
chr10:93757818(+) A-I      intronic
chr10:93710717(+) A-I      intronic
chr10:93718381(+) A-I      intronic
chr10:93716492(+) A-I      intronic
chr10:93765757(+) A-I      intronic
chr10:93758699(+) A-I      intronic
chr10:93717992(+) A-I      intronic
chr10:93708273(+) A-I      intronic
chr10:93700581(+) A-I      intronic
chr10:93759378(+) A-I      intronic
chr10:93714432(+) A-I      intronic
chr10:93783613(+) A-I      intronic
chr10:93762783(+) A-I      intronic
chr10:93728692(+) A-I      intronic
chr10:93716626(+) A-I      intronic
chr10:93708915(+) A-I      intronic
chr10:93728757(+) A-I      intronic
chr10:93710613(+) A-I      intronic
chr10:93760485(+) A-I      intronic
chr10:93718203(+) A-I      intronic
chr10:93706066(+) A-I      intronic
chr10:93718366(+) A-I      intronic
chr10:93761660(+) A-I      intronic
chr10:93783334(+) A-I      intronic
chr10:93708836(+) A-I      intronic
chr10:93702912(+) A-I      intronic
chr10:93762763(+) A-I      intronic
chr10:93718417(+) A-I      intronic
chr10:93760591(+) A-I      intronic
chr10:93758713(+) A-I      intronic
chr10:93708812(+) A-I      intronic
chr10:93708916(+) A-I      intronic
chr10:93765652(+) A-I      intronic
chr10:93758535(+) A-I      intronic
chr10:93762705(+) A-I      intronic
chr10:93723061(+) A-I      intronic
chr10:93765803(+) A-I      intronic
chr10:93722973(+) A-I      intronic
chr10:93717827(+) A-I      intronic
chr10:93761617(+) A-I      intronic
chr10:93759269(+) A-I      intronic
chr10:93728687(+) A-I      intronic
chr10:93714408(+) A-I      intronic
chr10:93758803(+) A-I      intronic
chr10:93700542(+) A-I      intronic
chr10:93729601(+) A-I      intronic
chr10:93759336(+) A-I      intronic
chr10:93758588(+) A-I      intronic
chr10:93716667(+) A-I      intronic
chr10:93718394(+) A-I      intronic
chr10:93709691(+) A-I      intronic
chr10:93762865(+) A-I      intronic
chr10:93722955(+) A-I      intronic
chr10:93782308(+) A-I      intronic
chr10:93710686(+) A-I      intronic
chr10:93765693(+) A-I      intronic
chr10:93758644(+) A-I      intronic
chr10:93729642(+) A-I      intronic
chr10:93772449(+) A-I      intronic
chr10:93759221(+) A-I      intronic
chr10:93708920(+) A-I      intronic
chr10:93765649(+) A-I      intronic
chr10:93757656(+) A-I      intronic
chr10:93762854(+) A-I      intronic
chr10:93759281(+) A-I      intronic
chr10:93772443(+) A-I      intronic
chr10:93762825(+) A-I      intronic
chr10:93783255(+) A-I      intronic
chr10:93706106(+) A-I      intronic
chr10:93760372(+) A-I      intronic
chr10:93765687(+) A-I      intronic
chr10:93728656(+) A-I      intronic
chr10:93702004(+) A-I      intronic
chr10:93758635(+) A-I      intronic
chr10:93765731(+) A-I      intronic
chr10:93783241(+) A-I      intronic
chr10:93729574(+) A-I      intronic
chr10:93759379(+) A-I      intronic
chr10:93783225(+) A-I      intronic
chr10:93764342(+) A-I      intronic
chr10:93762743(+) A-I      intronic
chr10:93718060(+) A-I      intronic
chr10:93717867(+) A-I      intronic
chr10:93728760(+) A-I      intronic
chr10:93759318(+) A-I      intronic
chr10:93784184(+) A-I      intronic
chr10:93708321(+) A-I      intronic
chr10:93716627(+) A-I      intronic
chr10:93728698(+) A-I      intronic
chr10:93784246(+) A-I      intronic
chr10:93783285(+) A-I      intronic
chr10:93722896(+) A-I      intronic
chr10:93729662(+) A-I      intronic
chr10:93762794(+) A-I      intronic
chr10:93718339(+) A-I      intronic
chr10:93757763(+) A-I      intronic
chr10:93772107(+) A-I      intronic
chr10:93710729(+) A-I      intronic
chr10:93709818(+) A-I      intronic
chr10:93701849(+) A-I      intronic
chr10:93713269(+) A-I      intronic
chr10:93712094(+) A-I      intronic
chr10:93762834(+) A-I      intronic
chr10:93713333(+) A-I      intronic
chr10:93783246(+) A-I      intronic
chr10:93712066(+) A-I      intronic
chr10:93713312(+) A-I      intronic
chr10:93712061(+) A-I      intronic
chr10:93713354(+) A-I      intronic
chr10:93688214(+) A-I      intronic
chr10:93717876(+) A-I      intronic
chr10:93713268(+) A-I      intronic
chr10:93686367(+) A-I      intronic
chr10:93718283(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED BTAF1
chr10:93713268(+) A-I intron -    21960545   //22327324
chr10:93713269(+) A-I intron -    21960545
chr10:93761593(+) A-I intron -    21960545
chr10:93761601(+) A-I intron -    21960545
chr10:93709654(+) A-G intron -    22484847
chr10:93709660(+) A-G intron -    22484847
chr10:93709664(+) A-G intron -    22484847
chr10:93709818(+) A-G intron -    22484847
chr10:93761660(+) A-G intron -    22484847
chr10:93765756(+) A-G intron -    22484847
chr10:93772443(+) A-G intron -    22484847
chr10:93772449(+) A-G intron -    22484847
chr10:93713268(+) A-G intron -    22484847
chr10:93713269(+) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase BTAF1
chr10:93683602-93683603(+) m6A 5'UTR       25456834//24981863
chr10:93683627-93683628(+) m6A 5'UTR       25456834//24981863
chr10:93711259-93711260(+) m6A CDS       24981863
chr10:93711316-93711317(+) m6A CDS       24981863
chr10:93713549-93713550(+) m6A CDS       24981863//27773535
chr10:93713557-93713558(+) m6A CDS       24981863//27773535
chr10:93713591-93713592(+) m6A CDS       24981863//27773535
chr10:93713616-93713617(+) m6A CDS       24981863
chr10:93786408-93786409(+) m6A CDS       -
chr10:93786485-93786486(+) m6A CDS       -
chr10:93786925-93786926(+) m6A CDS       -
chr10:93786968-93786969(+) m6A CDS       -
chr10:93787021-93787022(+) m6A CDS       -
chr10:93788613-93788614(+) m6A CDS       -
chr10:93789989-93789990(+) m6A 3'UTR       27773535
chr10:93790036-93790037(+) m6A 3'UTR       27773535

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-101-5p
Exosome Plasma     23663360
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Cerebrospinal fluid     24797360
Microvesicle Cell lines(GBM46|GBM8|HaCaT|K562|MCF-10A|MCF-7|MGG75)|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocytes     -
BTAF1
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol K562 cells     -
Exosome Blood     -
Insoluble cytoplasm HCC cell line (HepG2)     -
Membrane HCC cell line (HepG2)     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus Colon cancer cells     24393600
Nucleus HCC cell line (HepG2)|HeLa-S3 cells     -

Related Drug Information:


Resource Symbol Drug Name PubChem
ID
Function Link  
RNAInter hsa-miR-101-5p
Benzothiazole 7222 Drug interaction    RC00006831
Resource Symbol Drug Name PubChem ID PMID
NoncoRNA hsa-miR-101-5p
Methyl (9R,10S,11S,12R,19R)-11-acetyloxy-12-ethyl-4-[(13S,15R,17S)-17-ethyl-17-hydroxy-13-methoxycarbonyl-1,11-diazatetracyclo[13.3.1.04,12.05,10]nonadeca-4(12),5,7,9-tetraen-13-yl]-8-formyl-10-hydroxy-5-methoxy-8,16-diazapentacyclo[10.6.1.01,9.02,7.016,19]nonadeca-2,4,6,13-tetraene-10-carboxylate 134755071       26617885

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-101-5p
Interactor2: BTAF1

Evidence Support:


Weak-Evidence PAR-CLIP
Support Database ViRBase

References:


PMID 22291592 Target region 3'UTR
Source ViRBase Interactor1 expression None
Tissue or cell line EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells Interactor2 expression None
Description We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.

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