Detail Information

Basic Information:


  VIRBase ID:  

HHID00063974

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-99a-3p:           WIPF2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-99a-3p WIPF2
miRBase
Accession/Entrez ID
MIMAT0004511 147179
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - WICH//WIRE

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-99a-3p
rs1214222916 chr21:16539147    T/C
rs1419616925 chr21:16539158    T/A
rs763134262 chr21:16539151    A/G
rs766428664 chr21:16539153    G/A
rs774748688 chr21:16539159    G/C
rs950382507 chr21:16539154    G/A
rs1271070422 chr21:16539142    C/T
rs913397001 chr21:16539145    G/A

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR WIPF2
chr17:38432902(+) A-I      intronic
chr17:38431362(+) A-I      intronic
chr17:38432728(+) A-I      intronic
chr17:38432685(+) A-I      intronic
chr17:38432659(+) A-I      intronic
chr17:38432630(+) A-I      intronic
chr17:38432891(+) A-I      intronic
chr17:38432622(+) A-I      intronic
chr17:38432604(+) A-I      intronic
chr17:38431928(+) A-I      intronic
chr17:38431890(+) A-I      intronic
chr17:38431879(+) A-I      intronic
chr17:38390794(+) A-I      intronic
chr17:38431871(+) A-I      intronic
chr17:38431338(+) A-I      intronic
chr17:38431404(+) A-I      intronic
chr17:38432916(+) A-I      intronic
chr17:38423896(+) A-I      intronic
chr17:38423944(+) A-I      intronic
chr17:38425422(+) A-I      intronic
chr17:38425425(+) A-I      intronic
chr17:38431389(+) A-I      intronic
chr17:38431331(+) A-I      intronic
chr17:38431373(+) A-I      intronic
chr17:38394650(+) A-I      intronic
chr17:38431347(+) A-I      intronic
chr17:38431334(+) A-I      intronic
chr17:38431372(+) A-I      intronic
chr17:38431370(+) A-I      intronic
chr17:38431339(+) A-I      intronic
chr17:38394638(+) A-I      intronic
chr17:38431346(+) A-I      intronic
chr17:38394620(+) A-I      intronic
chr17:38390818(+) A-I      intronic
chr17:38394599(+) A-I      intronic
chr17:38379591(+) A-I      intronic
chr17:38439721(+) A-I      3'UTR
chr17:38379580(+) A-I      intronic
chr17:38379576(+) A-I      intronic
chr17:38390822(+) A-I      intronic
chr17:38439274(+) A-I      3'UTR
chr17:38439289(+) A-I      3'UTR
chr17:38439571(+) A-I      3'UTR
chr17:38379574(+) A-I      intronic
chr17:38439287(+) A-I      3'UTR
chr17:38432911(+) A-I      intronic
chr17:38398423(+) A-I      intronic
chr17:38398498(+) A-I      intronic
chr17:38398553(+) A-I      intronic
chr17:38398752(+) A-I      intronic
chr17:38398817(+) A-I      intronic
chr17:38402480(+) A-I      intronic
chr17:38402535(+) A-I      intronic
chr17:38402599(+) A-I      intronic
chr17:38403115(+) A-I      intronic
chr17:38403152(+) A-I      intronic
chr17:38403939(+) A-I      intronic
chr17:38396091(+) A-I      intronic
chr17:38396383(+) A-I      intronic
chr17:38396591(+) A-I      intronic
chr17:38403971(+) A-I      intronic
chr17:38403975(+) A-I      intronic
chr17:38407104(+) A-I      intronic
chr17:38396941(+) A-I      intronic
chr17:38397050(+) A-I      intronic
chr17:38397066(+) A-I      intronic
chr17:38397076(+) A-I      intronic
chr17:38398396(+) A-I      intronic
chr17:38385420(+) A-I      intronic
chr17:38434144(+) A-I      intronic
chr17:38434108(+) A-I      intronic
chr17:38434104(+) A-I      intronic
chr17:38434072(+) A-I      intronic
chr17:38434042(+) A-I      intronic
chr17:38433888(+) A-I      intronic
chr17:38433812(+) A-I      intronic
chr17:38433806(+) A-I      intronic
chr17:38433567(+) A-I      intronic
chr17:38433545(+) A-I      intronic
chr17:38433014(+) A-I      intronic
chr17:38432979(+) A-I      intronic
chr17:38432763(+) A-I      intronic
chr17:38432755(+) A-I      intronic
chr17:38432718(+) A-I      intronic
chr17:38432624(+) A-I      intronic
chr17:38432530(+) A-I      intronic
chr17:38432040(+) A-I      intronic
chr17:38432028(+) A-I      intronic
chr17:38432019(+) A-I      intronic
chr17:38432002(+) A-I      intronic
chr17:38431983(+) A-I      intronic
chr17:38431970(+) A-I      intronic
chr17:38431967(+) A-I      intronic
chr17:38431959(+) A-I      intronic
chr17:38431943(+) A-I      intronic
chr17:38431883(+) A-I      intronic
chr17:38431453(+) A-I      intronic
chr17:38431434(+) A-I      intronic
chr17:38431414(+) A-I      intronic
chr17:38431399(+) A-I      intronic
chr17:38431386(+) A-I      intronic
chr17:38431310(+) A-I      intronic
chr17:38431306(+) A-I      intronic
chr17:38431139(+) A-I      intronic
chr17:38430955(+) A-I      intronic
chr17:38430944(+) A-I      intronic
chr17:38430755(+) A-I      intronic
chr17:38383990(+) A-I      intronic
chr17:38430728(+) A-I      intronic
chr17:38429438(+) A-I      intronic
chr17:38429433(+) A-I      intronic
chr17:38429415(+) A-I      intronic
chr17:38429379(+) A-I      intronic
chr17:38426457(+) A-I      intronic
chr17:38426406(+) A-I      intronic
chr17:38425411(+) A-I      intronic
chr17:38425332(+) A-I      intronic
chr17:38425299(+) A-I      intronic
chr17:38425236(+) A-I      intronic
chr17:38424814(+) A-I      intronic
chr17:38424341(+) A-I      intronic
chr17:38424162(+) A-I      intronic
chr17:38423892(+) A-I      intronic
chr17:38423891(+) A-I      intronic
chr17:38420563(+) A-I      intronic
chr17:38420535(+) A-I      intronic
chr17:38420425(+) A-I      intronic
chr17:38420414(+) A-I      intronic
chr17:38420075(+) A-I      intronic
chr17:38420029(+) A-I      intronic
chr17:38420017(+) A-I      intronic
chr17:38420015(+) A-I      intronic
chr17:38418574(+) A-I      intronic
chr17:38418525(+) A-I      intronic
chr17:38418400(+) A-I      intronic
chr17:38417308(+) A-I      intronic
chr17:38416526(+) A-I      intronic
chr17:38416504(+) A-I      intronic
chr17:38414729(+) A-I      intronic
chr17:38414621(+) A-I      intronic
chr17:38414449(+) A-I      intronic
chr17:38413923(+) A-I      intronic
chr17:38413891(+) A-I      intronic
chr17:38413801(+) A-I      intronic
chr17:38412291(+) A-I      intronic
chr17:38412287(+) A-I      intronic
chr17:38412154(+) A-I      intronic
chr17:38412140(+) A-I      intronic
chr17:38412138(+) A-I      intronic
chr17:38411184(+) A-I      intronic
chr17:38409505(+) A-I      intronic
chr17:38409480(+) A-I      intronic
chr17:38409441(+) A-I      intronic
chr17:38409408(+) A-I      intronic
chr17:38409133(+) A-I      intronic
chr17:38409109(+) A-I      intronic
chr17:38409093(+) A-I      intronic
chr17:38409036(+) A-I      intronic
chr17:38409034(+) A-I      intronic
chr17:38408754(+) A-I      intronic
chr17:38408751(+) A-I      intronic
chr17:38407388(+) A-I      intronic
chr17:38376909(+) A-I      intronic
chr17:38377106(+) A-I      intronic
chr17:38377167(+) A-I      intronic
chr17:38377212(+) A-I      intronic
chr17:38377736(+) A-I      intronic
chr17:38377740(+) A-I      intronic
chr17:38377747(+) A-I      intronic
chr17:38377776(+) A-I      intronic
chr17:38377852(+) A-I      intronic
chr17:38377858(+) A-I      intronic
chr17:38378660(+) A-I      intronic
chr17:38378705(+) A-I      intronic
chr17:38379419(+) A-I      intronic
chr17:38383841(+) A-I      intronic
chr17:38383843(+) A-I      intronic
chr17:38383849(+) A-I      intronic
chr17:38383850(+) A-I      intronic
chr17:38383855(+) A-I      intronic
chr17:38383927(+) A-I      intronic
chr17:38383929(+) A-I      intronic
chr17:38383940(+) A-I      intronic
chr17:38384051(+) A-I      intronic
chr17:38409287(+) A-I      intronic
chr17:38385468(+) A-I      intronic
chr17:38385493(+) A-I      intronic
chr17:38385529(+) A-I      intronic
chr17:38385606(+) A-I      intronic
chr17:38385768(+) A-I      intronic
chr17:38385797(+) A-I      intronic
chr17:38385798(+) A-I      intronic
chr17:38385801(+) A-I      intronic
chr17:38385813(+) A-I      intronic
chr17:38386353(+) A-I      intronic
chr17:38386484(+) A-I      intronic
chr17:38386487(+) A-I      intronic
chr17:38386493(+) A-I      intronic
chr17:38389936(+) A-I      intronic
chr17:38390301(+) A-I      intronic
chr17:38390440(+) A-I      intronic
chr17:38390454(+) A-I      intronic
chr17:38390457(+) A-I      intronic
chr17:38390458(+) A-I      intronic
chr17:38390488(+) A-I      intronic
chr17:38390626(+) A-I      intronic
chr17:38390650(+) A-I      intronic
chr17:38390741(+) A-I      intronic
chr17:38390834(+) A-I      intronic
chr17:38391408(+) A-I      intronic
chr17:38391906(+) A-I      intronic
chr17:38391938(+) A-I      intronic
chr17:38393524(+) A-I      intronic
chr17:38393622(+) A-I      intronic
chr17:38393632(+) A-I      intronic
chr17:38393714(+) A-I      intronic
chr17:38393727(+) A-I      intronic
chr17:38393728(+) A-I      intronic
chr17:38393767(+) A-I      intronic
chr17:38393917(+) A-I      intronic
chr17:38393972(+) A-I      intronic
chr17:38394023(+) A-I      intronic
chr17:38394027(+) A-I      intronic
chr17:38394197(+) A-I      intronic
chr17:38394198(+) A-I      intronic
chr17:38394239(+) A-I      intronic
chr17:38394660(+) A-I      intronic
chr17:38394681(+) A-I      intronic
chr17:38394815(+) A-I      intronic
chr17:38394816(+) A-I      intronic
chr17:38394817(+) A-I      intronic
chr17:38394829(+) A-I      intronic
chr17:38394896(+) A-I      intronic
chr17:38395417(+) A-I      intronic
chr17:38395453(+) A-I      intronic
chr17:38395522(+) A-I      intronic
chr17:38395530(+) A-I      intronic
chr17:38396078(+) A-I      intronic
chr17:38396088(+) A-I      intronic
chr17:38439663(+) A-I      3'UTR
chr17:38439649(+) A-I      3'UTR
chr17:38439255(+) A-I      3'UTR
chr17:38439638(+) A-I      3'UTR
chr17:38439189(+) A-I      3'UTR
chr17:38386383(+) A-I      intronic
chr17:38396491(+) A-I      intronic
chr17:38408730(+) A-I      intronic
chr17:38431101(+) A-I      intronic
chr17:38392990(+) A-I      intronic
chr17:38431944(+) A-I      intronic
chr17:38390832(+) A-I      intronic
chr17:38419978(+) A-I      intronic
chr17:38420491(+) A-I      intronic
chr17:38411100(+) A-I      intronic
chr17:38389036(+) A-I      intronic
chr17:38385433(+) A-I      intronic
chr17:38403197(+) A-I      intronic
chr17:38432660(+) A-I      intronic
chr17:38425986(+) A-I      intronic
chr17:38390078(+) A-I      intronic
chr17:38427318(+) A-I      intronic
chr17:38409499(+) A-I      intronic
chr17:38401347(+) A-I      intronic
chr17:38432693(+) A-I      intronic
chr17:38390566(+) A-I      intronic
chr17:38416622(+) A-I      intronic
chr17:38420426(+) A-I      intronic
chr17:38432093(+) A-I      intronic
chr17:38422401(+) A-I      intronic
chr17:38425738(+) A-I      intronic
chr17:38424930(+) A-I      intronic
chr17:38390751(+) A-I      intronic
chr17:38383387(+) A-I      intronic
chr17:38420030(+) A-I      intronic
chr17:38423928(+) A-I      intronic
chr17:38403243(+) A-I      intronic
chr17:38390472(+) A-I      intronic
chr17:38427727(+) A-I      intronic
chr17:38414552(+) A-I      intronic
chr17:38431102(+) A-I      intronic
chr17:38407123(+) A-I      intronic
chr17:38423815(+) A-I      intronic
chr17:38409588(+) A-I      intronic
chr17:38378743(+) A-I      intronic
chr17:38430961(+) A-I      intronic
chr17:38378655(+) A-I      intronic
chr17:38403180(+) A-I      intronic
chr17:38425384(+) A-I      intronic
chr17:38398687(+) A-I      intronic
chr17:38426131(+) A-I      intronic
chr17:38389950(+) A-I      intronic
chr17:38386408(+) A-I      intronic
chr17:38385503(+) A-I      intronic
chr17:38420424(+) A-I      intronic
chr17:38398529(+) A-I      intronic
chr17:38391992(+) A-I      intronic
chr17:38396919(+) A-I      intronic
chr17:38432009(+) A-I      intronic
chr17:38402525(+) A-I      intronic
chr17:38390630(+) A-I      intronic
chr17:38433584(+) A-I      intronic
chr17:38420384(+) A-I      intronic
chr17:38431957(+) A-I      intronic
chr17:38433679(+) A-I      intronic
chr17:38423933(+) A-I      intronic
chr17:38408837(+) A-I      intronic
chr17:38402789(+) A-I      intronic
chr17:38403915(+) A-I      intronic
chr17:38392978(+) A-I      intronic
chr17:38393715(+) A-I      intronic
chr17:38433646(+) A-I      intronic
chr17:38433637(+) A-I      intronic
chr17:38433647(+) A-I      intronic
chr17:38402468(+) A-I      intronic
chr17:38424922(+) A-I      intronic
chr17:38408857(+) A-I      intronic
chr17:38430731(+) A-I      intronic
chr17:38411009(+) A-I      intronic
chr17:38412208(+) A-I      intronic
chr17:38416490(+) A-I      intronic
chr17:38431909(+) A-I      intronic
chr17:38378578(+) A-I      intronic
chr17:38393516(+) A-I      intronic
chr17:38398781(+) A-I      intronic
chr17:38402669(+) A-I      intronic
chr17:38403874(+) A-I      intronic
chr17:38433883(+) A-I      intronic
chr17:38392100(+) A-I      intronic
chr17:38415071(+) A-I      intronic
chr17:38386337(+) A-I      intronic
chr17:38432081(+) A-I      intronic
chr17:38402707(+) A-I      intronic
chr17:38427676(+) A-I      intronic
chr17:38426039(+) A-I      intronic
chr17:38427311(+) A-I      intronic
chr17:38426064(+) A-I      intronic
chr17:38403110(+) A-I      intronic
chr17:38385621(+) A-I      intronic
chr17:38425522(+) A-I      intronic
chr17:38407373(+) A-I      intronic
chr17:38414516(+) A-I      intronic
chr17:38396332(+) A-I      intronic
chr17:38377851(+) A-I      intronic
chr17:38418532(+) A-I      intronic
chr17:38385530(+) A-I      intronic
chr17:38430938(+) A-I      intronic
chr17:38425728(+) A-I      intronic
chr17:38409490(+) A-I      intronic
chr17:38391352(+) A-I      intronic
chr17:38420347(+) A-I      intronic
chr17:38390172(+) A-I      intronic
chr17:38394175(+) A-I      intronic
chr17:38419975(+) A-I      intronic
chr17:38389995(+) A-I      intronic
chr17:38431128(+) A-I      intronic
chr17:38413901(+) A-I      intronic
chr17:38423979(+) A-I      intronic
chr17:38430960(+) A-I      intronic
chr17:38385902(+) A-I      intronic
chr17:38385282(+) A-I      intronic
chr17:38398407(+) A-I      intronic
chr17:38378495(+) A-I      intronic
chr17:38433741(+) A-I      intronic
chr17:38439646(+) A-I      3'UTR
chr17:38409115(+) A-I      intronic
chr17:38432054(+) A-I      intronic
chr17:38394211(+) A-I      intronic
chr17:38388845(+) A-I      intronic
chr17:38434118(+) A-I      intronic
chr17:38431860(+) A-I      intronic
chr17:38393557(+) A-I      intronic
chr17:38433676(+) A-I      intronic
chr17:38394127(+) A-I      intronic
chr17:38392353(+) A-I      intronic
chr17:38393693(+) A-I      intronic
chr17:38425282(+) A-I      intronic
chr17:38423931(+) A-I      intronic
chr17:38390859(+) A-I      intronic
chr17:38439733(+) A-I      3'UTR
chr17:38432006(+) A-I      intronic
chr17:38439205(+) A-I      3'UTR
chr17:38430678(+) A-I      intronic
chr17:38420553(+) A-I      intronic
chr17:38394612(+) A-I      intronic
chr17:38412271(+) A-I      intronic
chr17:38385022(+) A-I      intronic
chr17:38439688(+) A-I      3'UTR
chr17:38433581(+) A-I      intronic
chr17:38425451(+) A-I      intronic
chr17:38386511(+) A-I      intronic
chr17:38404605(+) A-I      intronic
chr17:38425233(+) A-I      intronic
chr17:38414765(+) A-I      intronic
chr17:38417266(+) A-I      intronic
chr17:38411509(+) A-I      intronic
chr17:38425598(+) A-I      intronic
chr17:38415589(+) A-I      intronic
chr17:38393648(+) A-I      intronic
chr17:38412240(+) A-I      intronic
chr17:38423871(+) A-I      intronic
chr17:38409395(+) A-I      intronic
chr17:38404556(+) A-I      intronic
chr17:38379952(+) A-I      intronic
chr17:38378654(+) A-I      intronic
chr17:38401317(+) A-I      intronic
chr17:38388535(+) A-I      intronic
chr17:38432099(+) A-I      intronic
chr17:38403178(+) A-I      intronic
chr17:38390349(+) A-I      intronic
chr17:38415632(+) A-I      intronic
chr17:38390204(+) A-I      intronic
chr17:38436465(+) A-I      3'UTR
chr17:38432714(+) A-I      intronic
chr17:38403109(+) A-I      intronic
chr17:38407063(+) A-I      intronic
chr17:38424179(+) A-I      intronic
chr17:38439609(+) A-I      3'UTR
chr17:38439359(+) A-I      3'UTR
chr17:38439292(+) A-I      3'UTR
chr17:38408915(+) A-I      intronic
chr17:38439317(+) A-I      3'UTR
chr17:38432904(+) A-I      intronic
chr17:38431895(+) A-I      intronic
chr17:38391188(+) A-I      intronic
chr17:38386382(+) A-I      intronic
chr17:38390154(+) A-I      intronic
chr17:38398854(+) A-I      intronic
chr17:38439340(+) A-I      3'UTR
chr17:38439597(+) A-I      3'UTR
chr17:38439229(+) A-I      3'UTR
chr17:38401614(+) A-I      intronic
chr17:38433589(+) A-I      intronic
chr17:38424310(+) A-I      intronic
chr17:38439720(+) A-I      3'UTR
chr17:38401277(+) A-I      intronic
chr17:38390200(+) A-I      intronic
chr17:38404683(+) A-I      intronic
chr17:38408660(+) A-I      intronic
chr17:38425420(+) A-I      intronic
chr17:38409454(+) A-I      intronic
chr17:38408848(+) A-I      intronic
chr17:38439183(+) A-I      3'UTR
chr17:38398552(+) A-I      intronic
chr17:38423885(+) A-I      intronic
chr17:38411671(+) A-I      intronic
chr17:38412303(+) A-I      intronic
chr17:38387851(+) A-I      intronic
chr17:38425718(+) A-I      intronic
chr17:38427736(+) A-I      intronic
chr17:38433546(+) A-I      intronic
chr17:38432066(+) A-I      intronic
chr17:38377730(+) A-I      intronic
chr17:38409197(+) A-I      intronic
chr17:38407305(+) A-I      intronic
chr17:38414724(+) A-I      intronic
chr17:38439719(+) A-I      3'UTR
chr17:38439751(+) A-I      3'UTR
chr17:38392285(+) A-I      intronic
chr17:38439348(+) A-I      3'UTR
chr17:38432039(+) A-I      intronic
chr17:38432757(+) A-I      intronic
chr17:38423937(+) A-I      intronic
chr17:38439184(+) A-I      3'UTR
chr17:38394043(+) A-I      intronic
chr17:38384900(+) A-I      intronic
chr17:38431418(+) A-I      intronic
chr17:38431064(+) A-I      intronic
chr17:38402478(+) A-I      intronic
chr17:38439734(+) A-I      3'UTR
chr17:38383944(+) A-I      intronic
chr17:38385256(+) A-I      intronic
chr17:38439636(+) A-I      3'UTR
chr17:38419934(+) A-I      intronic
chr17:38416674(+) A-I      intronic
chr17:38385705(+) A-I      intronic
chr17:38439760(+) A-I      3'UTR
chr17:38403206(+) A-I      intronic
chr17:38390061(+) A-I      intronic
chr17:38426042(+) A-I      intronic
chr17:38439662(+) A-I      3'UTR
chr17:38439683(+) A-I      3'UTR
chr17:38432521(+) A-I      intronic
chr17:38413927(+) A-I      intronic
chr17:38412197(+) A-I      intronic
chr17:38402518(+) A-I      intronic
chr17:38432684(+) A-I      intronic
chr17:38389980(+) A-I      intronic
chr17:38394891(+) A-I      intronic
chr17:38424013(+) A-I      intronic
chr17:38415112(+) A-I      intronic
chr17:38420557(+) A-I      intronic
chr17:38439243(+) A-I      3'UTR
chr17:38439782(+) A-I      3'UTR
chr17:38394995(+) A-I      intronic
chr17:38393592(+) A-I      intronic
chr17:38413787(+) A-I      intronic
chr17:38380706(+) A-I      intronic
chr17:38415345(+) A-I      intronic
chr17:38402439(+) A-I      intronic
chr17:38424379(+) A-I      intronic
chr17:38439626(+) A-I      3'UTR
chr17:38439761(+) A-I      3'UTR
chr17:38391903(+) A-I      intronic
chr17:38402538(+) A-I      intronic
chr17:38439596(+) A-I      3'UTR
chr17:38413251(+) A-I      intronic
chr17:38386533(+) A-I      intronic
chr17:38427638(+) A-I      intronic
chr17:38377804(+) A-I      intronic
chr17:38385434(+) A-I      intronic
chr17:38388716(+) A-I      intronic
chr17:38424216(+) A-I      intronic
chr17:38420465(+) A-I      intronic
chr17:38427502(+) A-I      intronic
chr17:38439237(+) A-I      3'UTR
chr17:38424918(+) A-I      intronic
chr17:38439302(+) A-I      3'UTR
chr17:38377777(+) A-I      intronic
chr17:38420423(+) A-I      intronic
chr17:38439262(+) A-I      3'UTR
chr17:38425950(+) A-I      intronic
chr17:38434105(+) A-I      intronic
chr17:38391300(+) A-I      intronic
chr17:38420386(+) A-I      intronic
chr17:38390365(+) A-I      intronic
chr17:38408760(+) A-I      intronic
chr17:38390247(+) A-I      intronic
chr17:38439168(+) A-I      3'UTR
chr17:38424903(+) A-I      intronic
chr17:38432633(+) A-I      intronic
chr17:38414386(+) A-I      intronic
chr17:38411851(+) A-I      intronic
chr17:38411717(+) A-I      intronic
chr17:38404559(+) A-I      intronic
chr17:38385853(+) A-I      intronic
chr17:38439614(+) A-I      3'UTR
chr17:38439238(+) A-I      3'UTR
chr17:38391377(+) A-I      intronic
chr17:38385497(+) A-I      intronic
chr17:38439708(+) A-I      3'UTR
chr17:38411122(+) A-I      intronic
chr17:38418598(+) A-I      intronic
chr17:38404603(+) A-I      intronic
chr17:38411467(+) A-I      intronic
chr17:38403216(+) A-I      intronic
chr17:38414553(+) A-I      intronic
chr17:38396481(+) A-I      intronic
chr17:38385711(+) A-I      intronic
chr17:38403954(+) A-I      intronic
chr17:38398716(+) A-I      intronic
chr17:38431920(+) A-I      intronic
chr17:38434079(+) A-I      intronic
chr17:38425234(+) A-I      intronic
chr17:38434112(+) A-I      intronic
chr17:38392962(+) A-I      intronic
chr17:38433648(+) A-I      intronic
chr17:38413503(+) A-I      intronic
chr17:38384050(+) A-I      intronic
chr17:38432551(+) A-I      intronic
chr17:38417812(+) A-I      intronic
chr17:38385505(+) A-I      intronic
chr17:38390821(+) A-I      intronic
chr17:38434163(+) A-I      intronic
chr17:38424320(+) A-I      intronic
chr17:38403903(+) A-I      intronic
chr17:38425688(+) A-I      intronic
chr17:38425452(+) A-I      intronic
chr17:38430999(+) A-I      intronic
chr17:38423811(+) A-I      intronic
chr17:38419899(+) A-I      intronic
chr17:38398448(+) A-I      intronic
chr17:38390060(+) A-I      intronic
chr17:38424209(+) A-I      intronic
chr17:38393618(+) A-I      intronic
chr17:38409394(+) A-I      intronic
chr17:38389928(+) A-I      intronic
chr17:38384017(+) A-I      intronic
chr17:38402500(+) A-I      intronic
chr17:38391409(+) A-I      intronic
chr17:38415102(+) A-I      intronic
chr17:38419912(+) A-I      intronic
chr17:38414435(+) A-I      intronic
chr17:38403248(+) A-I      intronic
chr17:38403337(+) A-I      intronic
chr17:38425429(+) A-I      intronic
chr17:38415063(+) A-I      intronic
chr17:38385543(+) A-I      intronic
chr17:38385103(+) A-I      intronic
chr17:38431048(+) A-I      intronic
chr17:38392106(+) A-I      intronic
chr17:38383943(+) A-I      intronic
chr17:38422396(+) A-I      intronic
chr17:38415172(+) A-I      intronic
chr17:38377815(+) A-I      intronic
chr17:38386341(+) A-I      intronic
chr17:38424185(+) A-I      intronic
chr17:38426014(+) A-I      intronic
chr17:38386356(+) A-I      intronic
chr17:38394283(+) A-I      intronic
chr17:38433543(+) A-I      intronic
chr17:38420420(+) A-I      intronic
chr17:38420389(+) A-I      intronic
chr17:38418426(+) A-I      intronic
chr17:38403817(+) A-I      intronic
chr17:38408661(+) A-I      intronic
chr17:38383966(+) A-I      intronic
chr17:38386391(+) A-I      intronic
chr17:38414417(+) A-I      intronic
chr17:38386506(+) A-I      intronic
chr17:38403242(+) A-I      intronic
chr17:38378652(+) A-I      intronic
chr17:38391312(+) A-I      intronic
chr17:38383204(+) A-I      intronic
chr17:38411811(+) A-I      intronic
chr17:38425529(+) A-I      intronic
chr17:38432910(+) A-I      intronic
chr17:38398732(+) A-I      intronic
chr17:38431874(+) A-I      intronic
chr17:38377107(+) A-I      intronic
chr17:38408769(+) A-I      intronic
chr17:38386497(+) A-I      intronic
chr17:38391355(+) A-I      intronic
chr17:38424027(+) A-I      intronic
chr17:38386433(+) A-I      intronic
chr17:38387781(+) A-I      intronic
chr17:38420399(+) A-I      intronic
chr17:38425385(+) A-I      intronic
chr17:38413491(+) A-I      intronic
chr17:38432524(+) A-I      intronic
chr17:38393921(+) A-I      intronic
chr17:38390570(+) A-I      intronic
chr17:38378712(+) A-I      intronic
chr17:38432223(+) A-I      intronic
chr17:38383958(+) A-I      intronic
chr17:38412152(+) A-I      intronic
chr17:38392291(+) A-I      intronic
chr17:38427691(+) A-I      intronic
chr17:38385909(+) A-I      intronic
chr17:38403155(+) A-I      intronic
chr17:38378661(+) A-I      intronic
chr17:38424012(+) A-I      intronic
chr17:38423855(+) A-I      intronic
chr17:38392671(+) A-I      intronic
chr17:38427681(+) A-I      intronic
chr17:38384014(+) A-I      intronic
chr17:38422402(+) A-I      intronic
chr17:38407230(+) A-I      intronic
chr17:38396942(+) A-I      intronic
chr17:38417303(+) A-I      intronic
chr17:38390789(+) A-I      intronic
chr17:38434207(+) A-I      intronic
chr17:38415055(+) A-I      intronic
chr17:38413250(+) A-I      intronic
chr17:38390226(+) A-I      intronic
chr17:38403209(+) A-I      intronic
chr17:38424315(+) A-I      intronic
chr17:38418570(+) A-I      intronic
chr17:38425370(+) A-I      intronic
chr17:38430680(+) A-I      intronic
chr17:38420464(+) A-I      intronic
chr17:38412306(+) A-I      intronic
chr17:38384088(+) A-I      intronic
chr17:38425372(+) A-I      intronic
chr17:38430465(+) A-I      intronic
chr17:38431916(+) A-I      intronic
chr17:38420500(+) A-I      intronic
chr17:38424253(+) A-I      intronic
chr17:38393690(+) A-I      intronic
chr17:38430727(+) A-I      intronic
chr17:38417297(+) A-I      intronic
chr17:38411042(+) A-I      intronic
chr17:38423949(+) A-I      intronic
chr17:38390489(+) A-I      intronic
chr17:38411531(+) A-I      intronic
chr17:38386563(+) A-I      intronic
chr17:38423921(+) A-I      intronic
chr17:38433882(+) A-I      intronic
chr17:38415158(+) A-I      intronic
chr17:38423872(+) A-I      intronic
chr17:38391421(+) A-I      intronic
chr17:38403240(+) A-I      intronic
chr17:38425173(+) A-I      intronic
chr17:38382649(+) A-I      intronic
chr17:38430939(+) A-I      intronic
chr17:38385255(+) A-I      intronic
chr17:38392087(+) A-I      intronic
chr17:38409379(+) A-I      intronic
chr17:38393682(+) A-I      intronic
chr17:38424217(+) A-I      intronic
chr17:38432041(+) A-I      intronic
chr17:38403940(+) A-I      intronic
chr17:38413360(+) A-I      intronic
chr17:38408740(+) A-I      intronic
chr17:38416569(+) A-I      intronic
chr17:38424808(+) A-I      intronic
chr17:38419895(+) A-I      intronic
chr17:38431919(+) A-I      intronic
chr17:38411032(+) A-I      intronic
chr17:38433818(+) A-I      intronic
chr17:38382597(+) A-I      intronic
chr17:38377731(+) A-I      intronic
chr17:38408891(+) A-I      intronic
chr17:38430740(+) A-I      intronic
chr17:38390613(+) A-I      intronic
chr17:38413331(+) A-I      intronic
chr17:38423972(+) A-I      intronic
chr17:38413815(+) A-I      intronic
chr17:38432694(+) A-I      intronic
chr17:38381924(+) A-I      intronic
chr17:38394695(+) A-I      intronic
chr17:38418597(+) A-I      intronic
chr17:38409521(+) A-I      intronic
chr17:38398485(+) A-I      intronic
chr17:38403212(+) A-I      intronic
chr17:38408836(+) A-I      intronic
chr17:38390560(+) A-I      intronic
chr17:38385811(+) A-I      intronic
chr17:38419960(+) A-I      intronic
chr17:38386576(+) A-I      intronic
chr17:38393626(+) A-I      intronic
chr17:38426507(+) A-I      intronic
chr17:38416624(+) A-I      intronic
chr17:38425316(+) A-I      intronic
chr17:38413810(+) A-I      intronic
chr17:38432525(+) A-I      intronic
chr17:38391251(+) A-I      intronic
chr17:38420057(+) A-I      intronic
chr17:38382147(+) A-I      intronic
chr17:38431039(+) A-I      intronic
chr17:38408729(+) A-I      intronic
chr17:38424279(+) A-I      intronic
chr17:38408701(+) A-I      intronic
chr17:38389929(+) A-I      intronic
chr17:38424904(+) A-I      intronic
chr17:38390194(+) A-I      intronic
chr17:38403913(+) A-I      intronic
chr17:38403843(+) A-I      intronic
chr17:38425208(+) A-I      intronic
chr17:38393784(+) A-I      intronic
chr17:38384020(+) A-I      intronic
chr17:38423978(+) A-I      intronic
chr17:38390005(+) A-I      intronic
chr17:38383984(+) A-I      intronic
chr17:38412225(+) A-I      intronic
chr17:38403838(+) A-I      intronic
chr17:38386380(+) A-I      intronic
chr17:38403269(+) A-I      intronic
chr17:38394609(+) A-I      intronic
chr17:38402521(+) A-I      intronic
chr17:38431984(+) A-I      intronic
chr17:38420434(+) A-I      intronic
chr17:38394059(+) A-I      intronic
chr17:38439775(+) A-I      3'UTR
chr17:38439206(+) A-I      3'UTR
chr17:38436600(+) A-I      3'UTR
chr17:38439293(+) A-I      3'UTR
chr17:38439253(+) A-I      3'UTR
chr17:38439791(+) A-I      3'UTR
chr17:38439344(+) A-I      3'UTR
chr17:38439684(+) A-I      3'UTR
chr17:38439263(+) A-I      3'UTR
chr17:38439773(+) A-I      3'UTR
chr17:38439682(+) A-I      3'UTR
chr17:38439327(+) A-I      3'UTR
chr17:38439576(+) A-I      3'UTR
chr17:38439746(+) A-I      3'UTR
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED WIPF2
chr17:38390751(+) A-G intron -    22484847
chr17:38390821(+) A-G intron -    22484847
chr17:38402500(+) A-G intron -    22484847
chr17:38403874(+) A-G intron -    22484847
chr17:38424379(+) A-G intron -    22484847
chr17:38425233(+) A-G intron -    22484847
chr17:38425420(+) A-G intron -    22484847
chr17:38433818(+) A-G intron -    22484847
chr17:38433882(+) A-G intron -    22484847
chr17:38433883(+) A-G intron -    22484847
chr17:38436555(+) C-T intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase WIPF2
chr17:38375685-38375686(+) m6A 5'UTR//exon       24284625//24209618//24981863
chr17:38376783-38376784(+) m6A 5'UTR//intron       24209618//24981863
chr17:38412684-38412685(+) m6A 5'UTR//exon//intron       24209618//24981863
chr17:38416790-38416791(+) m6A CDS//exon//intron       24284625//24209618//24981863
chr17:38416850-38416851(+) m6A CDS//exon//intron       24284625//24981863
chr17:38416864-38416865(+) m6A CDS//exon//intron       24284625//24981863
chr17:38416876-38416877(+) m1A CDS//exon//intron       26863196
chr17:38420744-38420745(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618
chr17:38420843-38420844(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//24981863
chr17:38420868-38420869(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//24981863
chr17:38420886-38420887(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//24981863
chr17:38420900-38420901(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//24981863
chr17:38421048-38421049(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863
chr17:38421069-38421070(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//22575960
chr17:38421096-38421097(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//22575960
chr17:38421120-38421121(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//22575960
chr17:38421148-38421149(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr17:38421153-38421154(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr17:38421219-38421220(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//22608085
chr17:38421264-38421265(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//24981863//26404942//22608085
chr17:38421286-38421287(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//24981863//26404942
chr17:38421377-38421378(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//24981863
chr17:38429915-38429916(+) m6A exon//intron       24284625//24981863
chr17:38429925-38429926(+) m6A exon//intron       24284625
chr17:38430013-38430014(+) m6A exon//intron       24209618
chr17:38430126-38430127(+) m6A 3'UTR//CDS//exon       24284625//24209618//24981863
chr17:38433373-38433374(+) m6A 3'UTR//CDS//exon       24284625//24209618
chr17:38433398-38433399(+) m6A 3'UTR//CDS//exon       24284625//24209618
chr17:38433426-38433427(+) m6A 3'UTR//CDS//exon       24284625//24209618
chr17:38434513-38434514(+) m6A 3'UTR//exon       24284625//24209618//24981863
chr17:38434554-38434555(+) m6A 3'UTR//exon       24284625//24209618//24981863//22575960//22608085
chr17:38434603-38434604(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr17:38434665-38434666(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr17:38434691-38434692(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr17:38434739-38434740(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr17:38434910-38434911(+) m6A 3'UTR//exon       24284625//24981863//26404942//22575960//22608085
chr17:38435097-38435098(+) m6A 3'UTR//exon       -
chr17:38435554-38435555(+) m6A 3'UTR       25456834//22575960//22608085
chr17:38435604-38435605(+) m6A 3'UTR       24284625//25456834//24981863//22608085
chr17:38435624-38435625(+) Y 3'UTR       26075521
chr17:38435645-38435646(+) m6A 3'UTR       24284625//25456834//24981863//22608085
chr17:38435742-38435743(+) m6A 3'UTR       24981863
chr17:38436562-38436563(+) m6A 3'UTR       24209618
chr17:38436710-38436711(+) m6A 3'UTR       24981863
chr17:38436725-38436726(+) m6A 3'UTR       24981863
chr17:38436733-38436734(+) m6A 3'UTR       24981863
chr17:38436738-38436739(+) m6A 3'UTR       24981863
chr17:38436834-38436835(+) m6A 3'UTR       24981863
chr17:38436931-38436932(+) m6A 3'UTR       24981863
chr17:38436965-38436966(+) m6A 3'UTR       24981863
chr17:38437038-38437039(+) m6A 3'UTR       24284625//24981863
chr17:38438306-38438307(+) m6A 3'UTR       24981863//27773535
chr17:38438321-38438322(+) m6A 3'UTR       24981863//27773535
chr17:38438331-38438332(+) m6A 3'UTR       24981863//27773535
chr17:38438336-38438337(+) m6A 3'UTR       24981863//27773535
chr17:38438354-38438355(+) m6A 3'UTR       24981863//27773535

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-99a-3p
Exosome Plasma     23663360
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Fibroblasts|Mesenchymal stem cells     -
Mitochondrion Skeletal muscle myoblasts     21637849
WIPF2
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleoplasm K562 cells     -
Ribosome HEK-293 cells     22199352
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-99a-3p
Interactor2: WIPF2

Evidence Support:


Weak-Evidence PAR-CLIP
Support Database ViRBase

References:


PMID 22291592 Target region 3'UTR
Source ViRBase Interactor1 expression None
Tissue or cell line EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells Interactor2 expression None
Description We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.

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