Basic Information:

  VIRBase ID:  

HHID00063966

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-99a-3p:  MIMAT0004511          DST:  NM_001374729     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsa-miR-99a-3p	DST
miRBase Accession/Entrez ID	MIMAT0004511	667
Organism	Homo sapiens	Homo sapiens
Category	miRNA	mRNA
Alias	-	BP240//BPA//BPAG1//CATX-15//CATX15//D6S1101//DMH//DT//EBSB2//HSAN6//MACF2

ncRNA SNP information:

Resource	Symbol	SNP ID	SNP Position	Ref/Alt
miRNASNP-v3	hsa-miR-99a-3p	rs1214222916 chr21:16539147    T/C rs1419616925 chr21:16539158    T/A rs763134262 chr21:16539151    A/G rs766428664 chr21:16539153    G/A rs774748688 chr21:16539159    G/C rs950382507 chr21:16539154    G/A rs1271070422 chr21:16539142    C/T rs913397001 chr21:16539145    G/A

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	DST	chr6:56461890(-) A-I      intronic chr6:56445700(-) A-I      intronic chr6:56445726(-) A-I      intronic chr6:56445729(-) A-I      intronic chr6:56445760(-) A-I      intronic chr6:56461916(-) A-I      intronic chr6:56445675(-) A-I      intronic chr6:56461914(-) A-I      intronic chr6:56461021(-) A-I      intronic chr6:56461994(-) A-I      intronic chr6:56445737(-) A-I      intronic chr6:56445309(-) A-I      intronic chr6:56445220(-) A-I      intronic chr6:56461098(-) A-I      intronic chr6:56445765(-) A-I      intronic chr6:56445757(-) A-I      intronic chr6:56322982(-) A-I      3'UTR chr6:56445306(-) A-I      intronic chr6:56419161(-) A-I      intronic chr6:56445224(-) A-I      intronic chr6:56445295(-) A-I      intronic chr6:56445695(-) A-I      intronic chr6:56445736(-) A-I      intronic chr6:56462024(-) A-I      intronic chr6:56445315(-) A-I      intronic chr6:56506304(-) A-I      intronic chr6:56460964(-) A-I      intronic chr6:56461097(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	DST	chr6:56323303-56323304(-) m6A 3'UTR//exon       24284625//24981863//27773535//22608085 chr6:56323345-56323346(-) m6A 3'UTR//exon       24284625//24981863//27773535//22608085 chr6:56323353-56323354(-) m6A 3'UTR//exon       24284625//24981863//27773535//22608085 chr6:56323368-56323369(-) m6A 3'UTR//exon       24284625//24981863//27773535//22608085 chr6:56323426-56323427(-) m6A 3'UTR//exon       24284625//27773535//22608085 chr6:56323535-56323536(-) m6A 3'UTR//exon       27773535 chr6:56323575-56323576(-) m6A 3'UTR//exon       27773535 chr6:56323821-56323822(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//22575960//22608085 chr6:56323910-56323911(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr6:56323918-56323919(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr6:56323930-56323931(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr6:56323974-56323975(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr6:56324053-56324054(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27773536//22575960//22608085 chr6:56324940-56324941(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr6:56324978-56324979(-) m6A CDS//exon       24284625//24209618 chr6:56327907-56327908(-) m6A CDS//exon//intron       27773535 chr6:56327921-56327922(-) m6A CDS//exon//intron       27773535 chr6:56334958-56334959(-) m6A CDS       26404942 chr6:56335040-56335041(-) m6A CDS       26404942 chr6:56335980-56335981(-) m6A CDS       24981863 chr6:56350146-56350147(-) m6A CDS//exon       22575960 chr6:56350164-56350165(-) m6A CDS//exon       22575960 chr6:56350181-56350182(-) m6A CDS//exon       22575960 chr6:56350232-56350233(-) m6A CDS//exon       22575960 chr6:56350263-56350264(-) m6A CDS//exon       22575960 chr6:56351937-56351938(-) m6A CDS//exon       22575960//22608085 chr6:56351945-56351946(-) m6A CDS//exon       22575960//22608085 chr6:56351966-56351967(-) m6A CDS//exon       22575960//22608085 chr6:56351992-56351993(-) m6A CDS//exon       22575960//22608085 chr6:56352016-56352017(-) m6A CDS//exon       22575960//22608085 chr6:56354341-56354342(-) m6A CDS//exon       24981863 chr6:56354386-56354387(-) m6A CDS//exon       24981863 chr6:56358827-56358828(-) m6A CDS//exon       24981863 chr6:56358865-56358866(-) m6A CDS//exon       24981863 chr6:56358881-56358882(-) m6A CDS//exon       24981863 chr6:56365892-56365893(-) m6A CDS       27773535//22575960 chr6:56365914-56365915(-) m6A CDS       27773535//22575960 chr6:56365928-56365929(-) m6A CDS       22575960 chr6:56366027-56366028(-) m6A CDS       24981863 chr6:56366320-56366321(-) m6A CDS       24981863 chr6:56366365-56366366(-) m6A CDS       24981863 chr6:56366378-56366379(-) m6A CDS       24981863 chr6:56366392-56366393(-) m6A CDS       24981863 chr6:56366446-56366447(-) m6A CDS       24981863 chr6:56368811-56368812(-) Cm CDS       - chr6:56371521-56371522(-) m6A CDS       24981863 chr6:56371563-56371564(-) m6A CDS       24981863 chr6:56373347-56373348(-) m6A CDS       24981863 chr6:56373384-56373385(-) m6A CDS       24981863 chr6:56374500-56374501(-) m6A CDS       27773535 chr6:56374508-56374509(-) m6A CDS       27773535 chr6:56374537-56374538(-) m6A CDS       27773535 chr6:56374569-56374570(-) m6A CDS       27773535 chr6:56380440-56380441(-) m6A CDS       24981863 chr6:56380455-56380456(-) m6A CDS       24981863 chr6:56380460-56380461(-) m6A CDS       24981863 chr6:56382079-56382080(-) m6A CDS       27773535 chr6:56382324-56382325(-) m6A CDS       27773535 chr6:56382329-56382330(-) m6A CDS       27773535 chr6:56391240-56391241(-) m6A CDS       24284625//24209618//24981863//28052920//27773535//22608085 chr6:56391263-56391264(-) m6A CDS       24284625//24209618//24981863//28052920//27773535//22608085 chr6:56391290-56391291(-) m6A CDS       24284625//24209618//24981863//28052920//27773535//22608085 chr6:56391324-56391325(-) m6A CDS       24284625//24209618//24981863//28052920//27773535//27371828//22608085 chr6:56391342-56391343(-) m6A CDS       24284625//24209618//24981863//28052920//27773535//27371828//22608085 chr6:56391362-56391363(-) m6A CDS       24284625//24209618//24981863//28052920//27773535//27371828//22608085 chr6:56392296-56392297(-) m6A CDS       24284625//24209618//24981863//28052920//27773535//27371828//22608085 chr6:56392340-56392341(-) m6A CDS       24981863//27773535//22608085 chr6:56392372-56392373(-) m6A CDS       24981863//27773535//22608085 chr6:56392434-56392435(-) m6A CDS       22608085 chr6:56392442-56392443(-) m6A CDS       22608085 chr6:56394251-56394252(-) m6A CDS//intron       22575960 chr6:56394311-56394312(-) m6A CDS//intron       24981863//22575960//22608085 chr6:56394336-56394337(-) m6A CDS//intron       24981863//22575960//22608085 chr6:56394344-56394345(-) m6A CDS//intron       24981863//22575960//22608085 chr6:56394453-56394454(-) m6A CDS//intron       24981863 chr6:56394539-56394540(-) m6A CDS//intron       24981863 chr6:56394789-56394790(-) m6A CDS       24981863 chr6:56394798-56394799(-) m6A CDS       27773535 chr6:56394812-56394813(-) m6A CDS       27773535 chr6:56394822-56394823(-) m6A CDS       27773535 chr6:56394873-56394874(-) m6A CDS       27773535 chr6:56394881-56394882(-) m6A CDS       27773535 chr6:56397145-56397146(-) m6A CDS       27773535 chr6:56397197-56397198(-) m6A CDS       27773535 chr6:56401590-56401591(-) m6A 5'UTR//CDS       27773535 chr6:56401685-56401686(-) m6A 5'UTR//CDS       24981863//27773535 chr6:56401699-56401700(-) m6A 5'UTR//CDS       24981863//27773535 chr6:56401714-56401715(-) m6A 5'UTR//CDS       24981863//27773535 chr6:56405108-56405109(-) m6A CDS//intron       24981863//27773535 chr6:56405133-56405134(-) m6A CDS//intron       24981863//27773535//22608085 chr6:56405380-56405381(-) m6A CDS//intron       24981863//27773535//22608085 chr6:56405416-56405417(-) m6A CDS//intron       24981863//27773535//22608085 chr6:56405424-56405425(-) m6A CDS//intron       24981863//27773535//22608085 chr6:56405662-56405663(-) m6A CDS//intron       - chr6:56405692-56405693(-) m6A CDS//intron       - chr6:56405702-56405703(-) m6A CDS//intron       - chr6:56405753-56405754(-) m6A CDS//intron       - chr6:56405773-56405774(-) m6A CDS//intron       - chr6:56405893-56405894(-) m6A CDS//intron       - chr6:56405918-56405919(-) m6A CDS//intron       - chr6:56406153-56406154(-) m6A CDS//intron       - chr6:56406174-56406175(-) m6A CDS//intron       - chr6:56406221-56406222(-) m6A CDS//intron       - chr6:56406229-56406230(-) m6A CDS//intron       - chr6:56406238-56406239(-) m6A CDS//intron       - chr6:56406278-56406279(-) m6A CDS//intron       - chr6:56406293-56406294(-) m6A CDS//intron       - chr6:56406344-56406345(-) m6A CDS//intron       - chr6:56406349-56406350(-) m6A CDS//intron       - chr6:56407416-56407417(-) m6A 5'UTR//intron       24981863 chr6:56407515-56407516(-) m6A 5'UTR//intron       27773536 chr6:56417010-56417011(-) m6A CDS       24284625//24981863//27773535//22608085 chr6:56417050-56417051(-) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr6:56417121-56417122(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//22575960//22608085 chr6:56417156-56417157(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//22575960//22608085 chr6:56417176-56417177(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//22575960//22608085 chr6:56417195-56417196(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//22575960//22608085 chr6:56417226-56417227(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//22575960//22608085 chr6:56417256-56417257(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr6:56417296-56417297(-) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr6:56417319-56417320(-) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr6:56417340-56417341(-) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr6:56417377-56417378(-) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr6:56417422-56417423(-) Y 3'UTR//CDS       25219674 chr6:56417454-56417455(-) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr6:56417517-56417518(-) m6A CDS       24284625//24209618//24981863//28052920//27773535//22575960//22608085 chr6:56417544-56417545(-) m6A CDS       24284625//24209618//24981863//28052920//26404942//27773535//22575960//22608085 chr6:56417555-56417556(-) m6A CDS       24284625//24209618//24981863//28052920//26404942//27773535//22575960//22608085 chr6:56417576-56417577(-) m6A CDS       24284625//24209618//24981863//28052920//26404942//27773535//22575960//22608085 chr6:56417587-56417588(-) m6A CDS       24284625//24209618//24981863//28052920//26404942//27773535//22575960//22608085 chr6:56417640-56417641(-) m6A CDS       24284625//24209618//24981863//28052920//26404942//27773535//22575960//22608085 chr6:56417780-56417781(-) m6A CDS       24284625//24981863//27773535//22608085 chr6:56417812-56417813(-) m6A CDS       24284625//24981863//27773535//22608085 chr6:56417825-56417826(-) m6A CDS       24284625//24981863//27773535//22608085 chr6:56417912-56417913(-) m6A CDS       24981863//27773535//22608085 chr6:56417942-56417943(-) m6A CDS       24981863//27773535//22608085 chr6:56418029-56418030(-) m6A CDS       24981863//27773535//22608085 chr6:56418041-56418042(-) m6A CDS       24981863//27773535//22608085 chr6:56418060-56418061(-) m6A CDS       24981863//27773535//22608085 chr6:56418113-56418114(-) m6A CDS       24981863//27773535//22608085 chr6:56418156-56418157(-) m6A CDS       24981863//27773535//22608085 chr6:56418207-56418208(-) m6A CDS       24981863//27773535//22608085 chr6:56418240-56418241(-) m6A CDS       24981863//27773535//22608085 chr6:56418273-56418274(-) m6A CDS       24284625//24981863//26404942//27773535//22608085 chr6:56418284-56418285(-) m6A CDS       24284625//24981863//26404942//27773535//22608085 chr6:56418322-56418323(-) m6A CDS       24284625//24981863//26404942//27773535//22608085 chr6:56418347-56418348(-) m6A CDS       24284625//24981863//26404942//27773535//22608085 chr6:56420152-56420153(-) m6A CDS       24284625//27773535//22608085 chr6:56420200-56420201(-) m6A CDS       24284625//24209618//27773535//22608085 chr6:56420313-56420314(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//22575960//22608085 chr6:56420327-56420328(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//22575960//22608085 chr6:56420371-56420372(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//22575960//22608085 chr6:56420392-56420393(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//22575960//22608085 chr6:56420549-56420550(-) m6A CDS//exon       24284625//24209618//24981863//27773535//22575960//22608085 chr6:56420596-56420597(-) m6A CDS//exon       24284625//24981863//22575960//22608085 chr6:56420608-56420609(-) m6A CDS//exon       24284625//24981863//22575960//22608085 chr6:56422138-56422139(-) m6A CDS//exon       24284625//24981863 chr6:56422188-56422189(-) m6A CDS//exon       24284625//24981863 chr6:56422209-56422210(-) m6A CDS//exon       24284625//24981863//22575960 chr6:56422229-56422230(-) m6A CDS//exon       24284625//24981863//22575960 chr6:56422266-56422267(-) m6A CDS//exon       24284625//24981863//22575960 chr6:56422275-56422276(-) m6A CDS//exon       24284625//24981863//22575960 chr6:56422299-56422300(-) m6A CDS//exon       24981863//27773535 chr6:56425110-56425111(-) m6A CDS//exon       27773535 chr6:56425141-56425142(-) m6A CDS//exon       27773535 chr6:56425168-56425169(-) m6A CDS//exon       27773535 chr6:56425189-56425190(-) m6A CDS//exon       27773535 chr6:56425206-56425207(-) m6A CDS//exon       27773535 chr6:56426125-56426126(-) m6A CDS       27773535 chr6:56426179-56426180(-) m6A CDS       24981863 chr6:56426184-56426185(-) m6A CDS       24981863 chr6:56426249-56426250(-) m6A CDS       24981863 chr6:56426256-56426257(-) m6A CDS       24981863 chr6:56426261-56426262(-) m6A CDS       24981863 chr6:56426274-56426275(-) m6A CDS       24981863 chr6:56433343-56433344(-) m6A CDS       24981863 chr6:56433365-56433366(-) m6A CDS       24981863 chr6:56434660-56434661(-) m6A CDS       24981863 chr6:56437031-56437032(-) m6A 3'UTR//CDS       22608085 chr6:56437040-56437041(-) m6A 3'UTR//CDS       22608085 chr6:56437609-56437610(-) m6A 3'UTR//CDS       24981863//27773535//22608085 chr6:56437615-56437616(-) m6A 3'UTR//CDS       24981863//27773535//22608085 chr6:56437627-56437628(-) m6A 3'UTR//CDS       24981863//27773535//22608085 chr6:56437647-56437648(-) m6A 3'UTR//CDS       24981863//27773535//22608085 chr6:56437658-56437659(-) m6A 3'UTR//CDS       24284625//24981863//27773535//22608085 chr6:56437669-56437670(-) m6A 3'UTR//CDS       24284625//24981863//27773535//22608085 chr6:56437696-56437697(-) m6A 3'UTR//CDS       24284625//24981863//27773535//22608085 chr6:56437706-56437707(-) m6A 3'UTR//CDS       24284625//24981863//27773535//22608085 chr6:56437740-56437741(-) m6A 3'UTR//CDS       24981863//27773535//22608085 chr6:56437786-56437787(-) m6A 3'UTR//CDS       22608085 chr6:56443617-56443618(-) m6A CDS       27773535 chr6:56443690-56443691(-) m6A CDS       27773535 chr6:56443723-56443724(-) m6A CDS       27773535 chr6:56456984-56456985(-) m6A CDS       27773535 chr6:56457016-56457017(-) m6A CDS       24981863//27773535//22608085 chr6:56457030-56457031(-) m6A CDS       24981863//27773535//22608085 chr6:56457042-56457043(-) m6A CDS       24981863//22608085 chr6:56457072-56457073(-) m6A CDS       24981863//22608085 chr6:56457084-56457085(-) m6A CDS       24981863//22608085 chr6:56458590-56458591(-) m6A CDS       27773535//22608085 chr6:56458710-56458711(-) m6A CDS       24981863//27773535//22608085 chr6:56458718-56458719(-) m6A CDS       24981863//27773535//22608085 chr6:56458724-56458725(-) m6A CDS       24981863//27773535//22608085 chr6:56458837-56458838(-) m6A CDS       24284625//24981863//27773535//22608085 chr6:56458856-56458857(-) m6A CDS       24284625//24981863//27773535//22608085 chr6:56458866-56458867(-) m6A CDS       24284625//24981863//27773535//22608085 chr6:56458877-56458878(-) m6A CDS       24284625//24981863//27773535//22608085 chr6:56458913-56458914(-) m6A CDS       24284625//24981863//27773535//27773536//22608085 chr6:56462578-56462579(-) m6A CDS       24284625//24981863//27773535//27773536//22608085 chr6:56462602-56462603(-) m6A CDS       24284625//24981863//27773535//27773536//22608085 chr6:56462674-56462675(-) m6A CDS       24284625//25456834//24981863//28052920//27773535//27773536//22575960//22608085 chr6:56462684-56462685(-) m6A CDS       24284625//25456834//24981863//28052920//27773535//27773536//22575960//22608085 chr6:56462696-56462697(-) m6A CDS       24284625//25456834//24981863//28052920//27773535//27773536//22608085 chr6:56462702-56462703(-) m6A CDS       24284625//25456834//24981863//28052920//27773535//27773536//22608085 chr6:56462707-56462708(-) m6A CDS       24284625//25456834//24981863//28052920//27773535//27773536//22608085 chr6:56462724-56462725(-) m6A CDS       24284625//25456834//24981863//28052920//27773535//22608085 chr6:56462748-56462749(-) m6A CDS       24284625//25456834//24981863//28052920//27773535//22608085 chr6:56462757-56462758(-) m6A CDS       24284625//24981863//28052920//27773535//22608085 chr6:56462770-56462771(-) m6A CDS       24284625//24981863//28052920//27773535//22608085 chr6:56463281-56463282(-) m6A CDS       24284625//24981863//27773535//22608085 chr6:56463333-56463334(-) m6A CDS       24284625//24981863//27773535//22608085 chr6:56463354-56463355(-) m6A CDS       24981863//27773535//22608085 chr6:56463381-56463382(-) m6A CDS       24981863//27773535//22575960//22608085 chr6:56463387-56463388(-) m6A CDS       24981863//27773535//22575960//22608085 chr6:56463442-56463443(-) m6A CDS       24981863//27773535//22575960 chr6:56463451-56463452(-) m6A CDS       24981863//27773535//22575960 chr6:56464945-56464946(-) m6A CDS       24981863//27773535 chr6:56464952-56464953(-) m6A CDS       24981863//27773535 chr6:56464983-56464984(-) m6A CDS       24981863 chr6:56466261-56466262(-) m6A CDS//intron       24981863 chr6:56466278-56466279(-) m6A CDS//intron       24981863 chr6:56468370-56468371(-) m6A CDS//intron       27773535 chr6:56468422-56468423(-) m6A CDS//intron       27773535 chr6:56468433-56468434(-) m6A CDS//intron       27773535 chr6:56468637-56468638(-) m6A CDS//intron       27773535 chr6:56468772-56468773(-) m6A CDS//intron       24981863//22608085 chr6:56468789-56468790(-) m6A CDS//intron       24981863//22608085 chr6:56468812-56468813(-) m6A CDS//intron       24981863//27773535//22608085 chr6:56468896-56468897(-) m6A CDS//intron       24981863//27773535//22608085 chr6:56468907-56468908(-) m6A CDS//intron       24981863//27773535//22608085 chr6:56468940-56468941(-) m6A CDS//intron       24981863//27773535//22608085 chr6:56469150-56469151(-) m6A CDS//intron       24981863 chr6:56469283-56469284(-) m6A CDS//intron       24981863 chr6:56469300-56469301(-) m6A CDS//intron       24981863 chr6:56469319-56469320(-) m6A CDS//intron       24981863 chr6:56469435-56469436(-) m6A CDS//intron       24981863 chr6:56469591-56469592(-) m6A CDS//intron       24981863//22608085 chr6:56469653-56469654(-) m6A CDS//intron       24981863//22608085 chr6:56469721-56469722(-) m6A CDS//intron       24981863//22608085 chr6:56469777-56469778(-) m6A CDS//intron       24981863//27773535//22608085 chr6:56469831-56469832(-) m6A CDS//intron       24981863//27773535//22608085 chr6:56469870-56469871(-) m6A CDS//intron       24981863//22608085 chr6:56469906-56469907(-) m6A CDS//intron       24981863//22608085 chr6:56469958-56469959(-) m6A CDS//intron       24981863//22608085 chr6:56470068-56470069(-) m6A CDS//intron       24981863 chr6:56470119-56470120(-) m6A CDS//intron       24981863 chr6:56470129-56470130(-) m6A CDS//intron       24981863 chr6:56470203-56470204(-) m6A CDS//intron       24981863 chr6:56470283-56470284(-) m6A CDS//intron       24981863 chr6:56470552-56470553(-) m6A CDS//intron       24981863 chr6:56470628-56470629(-) m6A CDS//intron       24981863 chr6:56470645-56470646(-) m6A CDS//intron       24981863 chr6:56470690-56470691(-) m6A CDS//intron       24981863 chr6:56470885-56470886(-) m6A CDS//intron       24981863 chr6:56471100-56471101(-) m6A CDS//intron       24981863//27773535//22608085 chr6:56471258-56471259(-) m6A CDS//intron       24209618//24981863//27773535//22608085 chr6:56471271-56471272(-) m6A CDS//intron       24209618//24981863//27773535//22608085 chr6:56471377-56471378(-) m6A CDS//intron       24981863//22608085 chr6:56471615-56471616(-) m6A CDS//intron       24981863 chr6:56471675-56471676(-) m6A CDS//intron       24981863 chr6:56471907-56471908(-) m6A CDS//intron       24981863 chr6:56472157-56472158(-) m6A CDS//intron       24981863 chr6:56472179-56472180(-) m6A CDS//intron       24981863 chr6:56472250-56472251(-) m6A CDS//intron       24981863//22608085 chr6:56472259-56472260(-) m6A CDS//intron       24981863//22608085 chr6:56472296-56472297(-) m6A CDS//intron       24981863//22608085 chr6:56472322-56472323(-) m6A CDS//intron       24981863//22608085 chr6:56472334-56472335(-) m6A CDS//intron       24981863//22608085 chr6:56472364-56472365(-) m6A CDS//intron       24981863//22608085 chr6:56472372-56472373(-) m6A CDS//intron       24981863//22608085 chr6:56472377-56472378(-) m6A CDS//intron       24981863//22608085 chr6:56472462-56472463(-) m6A CDS//intron       24981863//22608085 chr6:56472551-56472552(-) m6A CDS//intron       24981863 chr6:56472561-56472562(-) m6A CDS//intron       24981863 chr6:56472567-56472568(-) m6A CDS//intron       24981863 chr6:56472751-56472752(-) m6A CDS//intron       24981863 chr6:56472784-56472785(-) m6A CDS//intron       24981863 chr6:56472894-56472895(-) m6A CDS//intron       24981863 chr6:56473312-56473313(-) m6A CDS//intron       24981863 chr6:56473334-56473335(-) m6A CDS//intron       25456834//24981863 chr6:56473369-56473370(-) m6A CDS//intron       25456834//24981863//22608085 chr6:56473481-56473482(-) m6A CDS//intron       24981863//22608085 chr6:56473489-56473490(-) m6A CDS//intron       24981863//22608085 chr6:56473528-56473529(-) m6A CDS//intron       24981863 chr6:56473726-56473727(-) m6A CDS//intron       24981863 chr6:56473914-56473915(-) m6A CDS//intron       24981863//22608085 chr6:56473938-56473939(-) m6A CDS//intron       24981863//22608085 chr6:56474027-56474028(-) m6A CDS//intron       24981863//22608085 chr6:56474108-56474109(-) m6A CDS//intron       24981863 chr6:56475316-56475317(-) m6A CDS       24981863 chr6:56475326-56475327(-) m6A CDS       24981863 chr6:56476308-56476309(-) m6A CDS       24981863//27773535 chr6:56476316-56476317(-) m6A CDS       24981863//27773535 chr6:56476339-56476340(-) m6A CDS       24981863//27773535 chr6:56476361-56476362(-) m6A CDS       24981863//27773535 chr6:56479174-56479175(-) m6A CDS       24981863//27773535 chr6:56479203-56479204(-) m6A CDS       24981863//27773535 chr6:56479255-56479256(-) m6A CDS       24981863//27773535 chr6:56479464-56479465(-) m6A 3'UTR//intron       27773535 chr6:56479510-56479511(-) m6A 3'UTR//intron       27773535 chr6:56479526-56479527(-) m6A 3'UTR//intron       27773535 chr6:56481776-56481777(-) m6A CDS//intron       24981863//27773535 chr6:56481882-56481883(-) m6A CDS//intron       24981863//27773535 chr6:56481903-56481904(-) m6A CDS//intron       25456834//24981863//27773535//22575960 chr6:56481933-56481934(-) m6A CDS//intron       25456834//24981863//27773535//22575960//22608085 chr6:56481941-56481942(-) m6A CDS//intron       25456834//24981863//27773535//22575960//22608085 chr6:56482046-56482047(-) m6A CDS//intron       25456834//24981863//27773535//22575960//22608085 chr6:56482056-56482057(-) m6A CDS//intron       25456834//24981863//27773535//22575960//22608085 chr6:56482063-56482064(-) m6A CDS//intron       25456834//24981863//27773535//22575960//22608085 chr6:56482099-56482100(-) m6A CDS//intron       24981863//27773535//22575960 chr6:56482154-56482155(-) m6A CDS//intron       24981863//27773535 chr6:56482165-56482166(-) m6A CDS//intron       24981863//27773535 chr6:56482205-56482206(-) m6A CDS//intron       24981863//27773535//22575960 chr6:56482810-56482811(-) m6A CDS//intron       24981863//27773535//22575960//22608085 chr6:56482849-56482850(-) m6A CDS//intron       24284625//24981863//27773535//22575960//22608085 chr6:56482859-56482860(-) m6A CDS//intron       24284625//24981863//27773535//22575960//22608085 chr6:56482871-56482872(-) m6A CDS//intron       24284625//24981863//27773535//22575960//22608085 chr6:56482897-56482898(-) m6A CDS//intron       24284625//24981863//27773535//22575960//22608085 chr6:56482914-56482915(-) m6A CDS//intron       24284625//24981863//27773535//22575960//22608085 chr6:56482947-56482948(-) m6A CDS//intron       24284625//24981863//27773535//22575960//22608085 chr6:56483038-56483039(-) m6A CDS//intron       24284625//25456834//24981863//27773535//22575960//22608085 chr6:56483080-56483081(-) m6A CDS//intron       24284625//25456834//24981863//27773535//22575960//22608085 chr6:56483088-56483089(-) m6A CDS//intron       24284625//25456834//24981863//27773535//22575960//22608085 chr6:56483128-56483129(-) m6A CDS//intron       24284625//25456834//24981863//27773535//22575960//22608085 chr6:56483135-56483136(-) m6A CDS//intron       24284625//25456834//24981863//27773535//22575960//22608085 chr6:56483194-56483195(-) m6A CDS//intron       24284625//25456834//24981863//27773535//22575960//22608085 chr6:56483207-56483208(-) m6A CDS//intron       24284625//25456834//24981863//27773535//22575960//22608085 chr6:56483260-56483261(-) m6A CDS//intron       24284625//24981863//27773535//22608085 chr6:56483282-56483283(-) m6A CDS//intron       24284625//24981863//27773535//22608085 chr6:56483300-56483301(-) m6A CDS//intron       24284625//24981863//27773535//22608085 chr6:56483341-56483342(-) m6A CDS//intron       24981863//27773535//22608085 chr6:56483395-56483396(-) m6A CDS//intron       24981863//27773535//22608085 chr6:56483416-56483417(-) m6A CDS//intron       24981863//27773535//22608085 chr6:56483425-56483426(-) m6A CDS//intron       24981863//27773535//22608085 chr6:56483439-56483440(-) m6A CDS//intron       24981863//27773535//22608085 chr6:56483474-56483475(-) m6A CDS//intron       24981863//27773535 chr6:56483587-56483588(-) m6A CDS//intron       24981863//27773535 chr6:56483652-56483653(-) m6A CDS//intron       24981863//27773535 chr6:56483770-56483771(-) m6A CDS//intron       24981863//27773535 chr6:56483819-56483820(-) m6A CDS//intron       24981863//27773535//22608085 chr6:56483876-56483877(-) m6A CDS//intron       24981863//27773535//22608085 chr6:56483919-56483920(-) m6A CDS//intron       24981863//27773535//22608085 chr6:56483929-56483930(-) m6A CDS//intron       24981863//27773535//22608085 chr6:56483941-56483942(-) m6A CDS//intron       24981863//27773535//22608085 chr6:56484019-56484020(-) m6A CDS//intron       24981863//27773535//22608085 chr6:56484075-56484076(-) m6A CDS//intron       24981863//27773535//22608085 chr6:56484112-56484113(-) m6A CDS//intron       24981863//27773535//22608085 chr6:56484235-56484236(-) m6A CDS//intron       24981863//27773535 chr6:56484274-56484275(-) m6A CDS//intron       24981863//27773535 chr6:56484368-56484369(-) m6A CDS//intron       27773535 chr6:56484385-56484386(-) m6A CDS//intron       27773535 chr6:56484489-56484490(-) m6A CDS//intron       24981863//27773535 chr6:56484594-56484595(-) m6A CDS//intron       24981863//27773535//22608085 chr6:56484604-56484605(-) m6A CDS//intron       24981863//27773535//22608085 chr6:56484667-56484668(-) m6A CDS//intron       24981863//27773535//22608085 chr6:56484689-56484690(-) m6A CDS//intron       24981863//27773535//22608085 chr6:56484694-56484695(-) m6A CDS//intron       24981863//27773535//22608085 chr6:56484721-56484722(-) m6A CDS//intron       24981863//27773535//22608085 chr6:56484736-56484737(-) m6A CDS//intron       24981863//27773535//22608085 chr6:56484742-56484743(-) m6A CDS//intron       24981863//27773535//22608085 chr6:56484766-56484767(-) m6A CDS//intron       24981863//27773535 chr6:56484910-56484911(-) m6A CDS//intron       24981863//27773535 chr6:56484925-56484926(-) m6A CDS//intron       24981863//27773535 chr6:56484941-56484942(-) m6A CDS//intron       24981863//27773535 chr6:56484973-56484974(-) m6A CDS//intron       24981863//27773535 chr6:56484986-56484987(-) m6A CDS//intron       24981863//27773535 chr6:56485080-56485081(-) m6A CDS//intron       24981863//27773535 chr6:56485097-56485098(-) m6A CDS//intron       24981863//27773535 chr6:56485130-56485131(-) m6A CDS//intron       24981863//27773535 chr6:56485192-56485193(-) m6A CDS//intron       24981863//27773535//22608085 chr6:56485227-56485228(-) m6A CDS//intron       24981863//27773535//22608085 chr6:56485234-56485235(-) m6A CDS//intron       24981863//27773535//22608085 chr6:56485351-56485352(-) m6A CDS//intron       24981863//27773535 chr6:56485375-56485376(-) m6A CDS//intron       24981863 chr6:56485384-56485385(-) m6A CDS//intron       24981863 chr6:56485426-56485427(-) m6A CDS//intron       24981863 chr6:56485486-56485487(-) m6A CDS//intron       24981863 chr6:56485494-56485495(-) m6A CDS//intron       24981863 chr6:56489245-56489246(-) m6A CDS//intron       27773535 chr6:56489410-56489411(-) m6A CDS       24981863 chr6:56489418-56489419(-) m6A CDS       24981863 chr6:56490046-56490047(-) m6A CDS       24981863//27773535//22575960 chr6:56492022-56492023(-) m6A CDS       24981863//27773535//22575960 chr6:56492058-56492059(-) m6A CDS       24981863//27773535 chr6:56492825-56492826(-) m6A CDS       24981863//27773535 chr6:56492870-56492871(-) m6A CDS       24981863//27773535 chr6:56492911-56492912(-) m6A CDS       24981863//27773535 chr6:56492950-56492951(-) m6A CDS       24981863//27773535//22575960 chr6:56494128-56494129(-) m6A CDS       24981863//27773535//22575960 chr6:56494211-56494212(-) m6A CDS       24981863//27773535 chr6:56495108-56495109(-) m6A CDS       24981863 chr6:56495113-56495114(-) m6A CDS       24981863 chr6:56495123-56495124(-) m6A CDS       24981863 chr6:56495151-56495152(-) m6A CDS       24981863 chr6:56495173-56495174(-) m6A CDS       24981863 chr6:56496044-56496045(-) m6A CDS       24981863//27773535 chr6:56496050-56496051(-) m6A CDS       24981863//27773535 chr6:56496144-56496145(-) m6A CDS       24981863//27773535 chr6:56496184-56496185(-) m6A CDS       27773535 chr6:56496686-56496687(-) m6A CDS       27773535 chr6:56496762-56496763(-) Am CDS       - chr6:56499687-56499688(-) m6A CDS       24981863//22575960 chr6:56499707-56499708(-) m6A CDS       24981863//22575960 chr6:56499736-56499737(-) m6A CDS       24981863//22575960 chr6:56500405-56500406(-) m6A CDS       22575960 chr6:56504146-56504147(-) m6A CDS//exon       24981863//27773535 chr6:56504281-56504282(-) m6A CDS//exon       24981863//27773535 chr6:56504340-56504341(-) m6A CDS//exon       24981863//27773535 chr6:56505260-56505261(-) m6A CDS//exon       24284625//24981863//22575960//22608085 chr6:56505277-56505278(-) m6A CDS//exon       24284625//24981863//22575960//22608085 chr6:56505318-56505319(-) m6A CDS//exon       24284625//24981863//22575960//22608085 chr6:56505393-56505394(-) m6A CDS//exon       22608085 chr6:56507605-56507606(-) m6A 5'UTR//exon//intron       24981863 chr6:56507646-56507647(-) m6A 5'UTR//exon//intron       24981863 chr6:56510716-56510717(-) m6A CDS//exon       24981863//27773535 chr6:56510925-56510926(-) m6A CDS//exon       27773535 chr6:56557336-56557337(-) m6A CDS//exon//intron       24981863//27773535 chr6:56557427-56557428(-) m6A CDS//exon//intron       24981863//27773535//22575960 chr6:56557473-56557474(-) m6A CDS//exon//intron       24981863//27773535//22575960 chr6:56557504-56557505(-) m6A CDS//exon//intron       24981863//27773535//22575960 chr6:56557530-56557531(-) m6A CDS//exon//intron       24981863//27773535//22575960 chr6:56557550-56557551(-) m6A CDS//exon//intron       24981863//27773535//22575960 chr6:56557558-56557559(-) m6A CDS//exon//intron       24981863//27773535//22575960 chr6:56557576-56557577(-) m6A CDS//exon//intron       24981863//27773535//22575960 chr6:56557617-56557618(-) m6A CDS//exon//intron       24981863//27773535//22575960 chr6:56557623-56557624(-) m6A CDS//exon//intron       24981863//27773535//22575960 chr6:56557649-56557650(-) m6A CDS//exon//intron       24981863//27773535//22575960 chr6:56557684-56557685(-) m6A CDS//exon//intron       24981863//27773535//22575960 chr6:56557713-56557714(-) m6A CDS//exon//intron       24981863//27773535 chr6:56557737-56557738(-) m6A CDS//exon//intron       24981863//27773535 chr6:56557786-56557787(-) m6A CDS//exon//intron       24981863//27773535 chr6:56557817-56557818(-) m6A CDS//exon//intron       24981863//27773535 chr6:56557830-56557831(-) m6A CDS//exon//intron       24981863//27773535 chr6:56557873-56557874(-) m6A CDS//exon//intron       24981863//27773535 chr6:56557883-56557884(-) m6A CDS//exon//intron       24981863//27773535 chr6:56557905-56557906(-) m6A CDS//exon//intron       24981863//27773535 chr6:56558024-56558025(-) m6A exon//intron       24981863//27773535 chr6:56558081-56558082(-) m6A exon//intron       24981863 chr6:56615119-56615120(-) Y intron       16381836 chr6:56819352-56819353(-) m6A CDS       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsa-miR-99a-3p	Exosome Plasma     23663360 Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     - Microvesicle Fibroblasts|Mesenchymal stem cells     - Mitochondrion Skeletal muscle myoblasts     21637849
	DST	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)|K562 cells     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Insoluble cytoplasm HCC cell line (HepG2)     - Membrane HCC cell line (HepG2)     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|K562 cells     - Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):

Interactor1: hsa-miR-99a-3p
Interactor2: DST

Evidence Support:

Weak-Evidence	PAR-CLIP
Support Database	ViRBase

References:

PMID	22291592	Target region	CDS
Source	ViRBase	Interactor1 expression	None
Tissue or cell line	EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells	Interactor2 expression	None
Description	We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.