Detail Information

Basic Information:


  VIRBase ID:  

HHID00063884

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-92a-2-5p:           CYRIB:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-92a-2-5p CYRIB
miRBase
Accession/Entrez ID		 MIMAT0004508 51571
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - BM-009//CYRI//CYRI-B//FAM49B//L1

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-92a-2-5p
rs1410543065 chrX:134169584    T/C
rs1472671311 chrX:134169587    T/C
rs377133365 chrX:134169588    G/A
rs377133365 chrX:134169588    G/C
rs745614747 chrX:134169602    C/T
rs769366736 chrX:134169603    C/T

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR CYRIB
chr8:130910118(-) A-I      intronic
chr8:130910123(-) A-I      intronic
chr8:130910149(-) A-I      intronic
chr8:130917571(-) A-I      intronic
chr8:130917659(-) A-I      intronic
chr8:130917660(-) A-I      intronic
chr8:130917666(-) A-I      intronic
chr8:130875578(-) A-I      intronic
chr8:130859588(-) A-I      intronic
chr8:130859528(-) A-I      intronic
chr8:130923179(-) A-I      intronic
chr8:130931367(-) A-I      intronic
chr8:130934945(-) A-I      intronic
chr8:130935046(-) A-I      intronic
chr8:130935052(-) A-I      intronic
chr8:130935105(-) A-I      intronic
chr8:130935107(-) A-I      intronic
chr8:130935658(-) A-I      intronic
chr8:130936300(-) A-I      intronic
chr8:130943982(-) A-I      intronic
chr8:130944389(-) A-I      intronic
chr8:130945964(-) A-I      intronic
chr8:130945966(-) A-I      intronic
chr8:130875586(-) A-I      intronic
chr8:130875649(-) A-I      intronic
chr8:130946008(-) A-I      intronic
chr8:130946057(-) A-I      intronic
chr8:130875769(-) A-I      intronic
chr8:130882574(-) A-I      intronic
chr8:130946038(-) A-I      intronic
chr8:130859586(-) A-I      intronic
chr8:130902894(-) A-I      intronic
chr8:130859610(-) A-I      intronic
chr8:130901281(-) A-I      intronic
chr8:130902973(-) A-I      intronic
chr8:130882653(-) A-I      intronic
chr8:130923176(-) A-I      intronic
chr8:130859706(-) A-I      intronic
chr8:130909936(-) A-I      intronic
chr8:130861005(-) A-I      intronic
chr8:130887588(-) A-I      intronic
chr8:130902991(-) A-I      intronic
chr8:130903027(-) A-I      intronic
chr8:130895184(-) A-I      intronic
chr8:130895199(-) A-I      intronic
chr8:130895200(-) A-I      intronic
chr8:130896667(-) A-I      intronic
chr8:130903055(-) A-I      intronic
chr8:130896672(-) A-I      intronic
chr8:130901159(-) A-I      intronic
chr8:130896673(-) A-I      intronic
chr8:130896710(-) A-I      intronic
chr8:130901173(-) A-I      intronic
chr8:130901176(-) A-I      intronic
chr8:130901217(-) A-I      intronic
chr8:130909976(-) A-I      intronic
chr8:130907472(-) A-I      intronic
chr8:130909960(-) A-I      intronic
chr8:130909951(-) A-I      intronic
chr8:130860992(-) A-I      intronic
chr8:130961282(-) A-I      ncRNA
chr8:130961280(-) A-I      ncRNA
chr8:130961275(-) A-I      ncRNA
chr8:130961274(-) A-I      ncRNA
chr8:130907482(-) A-I      intronic
chr8:130907510(-) A-I      intronic
chr8:130860991(-) A-I      intronic
chr8:130860989(-) A-I      intronic
chr8:130860963(-) A-I      intronic
chr8:130860937(-) A-I      intronic
chr8:130909963(-) A-I      intronic
chr8:130860903(-) A-I      intronic
chr8:130860890(-) A-I      intronic
chr8:130860882(-) A-I      intronic
chr8:130860284(-) A-I      intronic
chr8:130860270(-) A-I      intronic
chr8:130908018(-) A-I      intronic
chr8:130860265(-) A-I      intronic
chr8:130901230(-) A-I      intronic
chr8:130901257(-) A-I      intronic
chr8:130902293(-) A-I      intronic
chr8:130908060(-) A-I      intronic
chr8:130910013(-) A-I      intronic
chr8:130902309(-) A-I      intronic
chr8:130860906(-) A-I      intronic
chr8:130944409(-) A-I      intronic
chr8:130860102(-) A-I      intronic
chr8:130925489(-) A-I      intronic
chr8:130902148(-) A-I      intronic
chr8:130859520(-) A-I      intronic
chr8:130879300(-) A-I      intronic
chr8:130875659(-) A-I      intronic
chr8:130934920(-) A-I      intronic
chr8:130946037(-) A-I      intronic
chr8:130925454(-) A-I      intronic
chr8:130875685(-) A-I      intronic
chr8:130901256(-) A-I      intronic
chr8:130882573(-) A-I      intronic
chr8:130903077(-) A-I      intronic
chr8:130920234(-) A-I      intronic
chr8:130901095(-) A-I      intronic
chr8:130944439(-) A-I      intronic
chr8:130882396(-) A-I      intronic
chr8:130896562(-) A-I      intronic
chr8:130901082(-) A-I      intronic
chr8:130874990(-) A-I      intronic
chr8:130860324(-) A-I      intronic
chr8:130895262(-) A-I      intronic
chr8:130882633(-) A-I      intronic
chr8:130910230(-) A-I      intronic
chr8:130946025(-) A-I      intronic
chr8:130935659(-) A-I      intronic
chr8:130887680(-) A-I      intronic
chr8:130935722(-) A-I      intronic
chr8:130902284(-) A-I      intronic
chr8:130860146(-) A-I      intronic
chr8:130944421(-) A-I      intronic
chr8:130901122(-) A-I      intronic
chr8:130902213(-) A-I      intronic
chr8:130948956(-) A-I      intronic
chr8:130860319(-) A-I      intronic
chr8:130879608(-) A-I      intronic
chr8:130902221(-) A-I      intronic
chr8:130860226(-) A-I      intronic
chr8:130920191(-) A-I      intronic
chr8:130917658(-) A-I      intronic
chr8:130946020(-) A-I      intronic
chr8:130944066(-) A-I      intronic
chr8:130922992(-) A-I      intronic
chr8:130896771(-) A-I      intronic
chr8:130946073(-) A-I      intronic
chr8:130944383(-) A-I      intronic
chr8:130860953(-) A-I      intronic
chr8:130901094(-) A-I      intronic
chr8:130860325(-) A-I      intronic
chr8:130945955(-) A-I      intronic
chr8:130944424(-) A-I      intronic
chr8:130875658(-) A-I      intronic
chr8:130860298(-) A-I      intronic
chr8:130861067(-) A-I      intronic
chr8:130902141(-) A-I      intronic
chr8:130902144(-) A-I      intronic
chr8:130859453(-) A-I      intronic
chr8:130944454(-) A-I      intronic
chr8:130895187(-) A-I      intronic
chr8:130943970(-) A-I      intronic
chr8:130859465(-) A-I      intronic
chr8:130859669(-) A-I      intronic
chr8:130875591(-) A-I      intronic
chr8:130935095(-) A-I      intronic
chr8:130944356(-) A-I      intronic
chr8:130860255(-) A-I      intronic
chr8:130935691(-) A-I      intronic
chr8:130935771(-) A-I      intronic
chr8:130903046(-) A-I      intronic
chr8:130936254(-) A-I      intronic
chr8:130859545(-) A-I      intronic
chr8:130917620(-) A-I      intronic
chr8:130860256(-) A-I      intronic
chr8:130901253(-) A-I      intronic
chr8:130936306(-) A-I      intronic
chr8:130901227(-) A-I      intronic
chr8:130944382(-) A-I      intronic
chr8:130860271(-) A-I      intronic
chr8:130935688(-) A-I      intronic
chr8:130945998(-) A-I      intronic
chr8:130859475(-) A-I      intronic
chr8:130901239(-) A-I      intronic
chr8:130922932(-) A-I      intronic
chr8:130943983(-) A-I      intronic
chr8:130860994(-) A-I      intronic
chr8:130935720(-) A-I      intronic
chr8:130936428(-) A-I      intronic
chr8:130923099(-) A-I      intronic
chr8:130901328(-) A-I      intronic
chr8:130859716(-) A-I      intronic
chr8:130920003(-) A-I      intronic
chr8:130923096(-) A-I      intronic
chr8:130902158(-) A-I      intronic
chr8:130860186(-) A-I      intronic
chr8:130860119(-) A-I      intronic
chr8:130887730(-) A-I      intronic
chr8:130901191(-) A-I      intronic
chr8:130902194(-) A-I      intronic
chr8:130923036(-) A-I      intronic
chr8:130945972(-) A-I      intronic

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-92a-2-5p
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Cell lines(GBM46|GBM8|HaCaT|K562|MCF-10A|MCF-7|MGG75)|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocytes     -
Mitochondrion Cell line (HEK-293)     22984580
CYRIB
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HCC cell line (HepG2)|K562 cells     -
Exosome Blood     -
Membrane HCC cell line (HepG2)     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HeLa-S3 cells|K562 cells     -

Related Drug Information:


Resource Symbol Drug Name PubChem
ID		 Function Link  
RNAInter hsa-miR-92a-2-5p
Diethylstilbestrol 448537 Drug interaction    RC00006830
Carboplatinum 38904 Drug interaction    RC00006829
cis-Diaminedichloroplatinum 2767 Drug interaction    RC00006828
Resource Symbol Drug Name PubChem ID PMID
NoncoRNA hsa-miR-92a-2-5p
Carboplatin 426756       20548249

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-92a-2-5p
Interactor2: CYRIB

Evidence Support:


Weak-Evidence PAR-CLIP
Support Database ViRBase

References:


PMID 22291592 Target region 3'UTR
Source ViRBase Interactor1 expression None
Tissue or cell line EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells Interactor2 expression None
Description We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.

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