Detail Information

Basic Information:


  VIRBase ID:  

HHID00061089

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-590-5p:           LCOR:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-590-5p LCOR
miRBase
Accession/Entrez ID
MIMAT0003258 84458
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - C10orf12//MLR2

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-590-5p
rs1554709898 chr7:74191225    A/G
rs192756765 chr7:74191221    T/A
rs781995768 chr7:74191223    A/G
rs782101000 chr7:74191229    G/A
rs189727189 chr7:74191216    C/T

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR LCOR
chr10:98635073(+) A-I      intronic
chr10:98635066(+) A-I      intronic
chr10:98635061(+) A-I      intronic
chr10:98716806(+) A-I      3'UTR
chr10:98611987(+) A-I      intronic
chr10:98635026(+) A-I      intronic
chr10:98611990(+) A-I      intronic
chr10:98635047(+) A-I      intronic
chr10:98635053(+) A-I      intronic
chr10:98648002(+) A-I      intronic
chr10:98647972(+) A-I      intronic
chr10:98648007(+) A-I      intronic
chr10:98649955(+) A-I      intronic
chr10:98648011(+) A-I      intronic
chr10:98648001(+) A-I      intronic
chr10:98647966(+) A-I      intronic
chr10:98647961(+) A-I      intronic
chr10:98647957(+) A-I      intronic
chr10:98647941(+) A-I      intronic
chr10:98647874(+) A-I      intronic
chr10:98647718(+) A-I      intronic
chr10:98647714(+) A-I      intronic
chr10:98647635(+) A-I      intronic
chr10:98647618(+) A-I      intronic
chr10:98647577(+) A-I      intronic
chr10:98647555(+) A-I      intronic
chr10:98647542(+) A-I      intronic
chr10:98647517(+) A-I      intronic
chr10:98647209(+) A-I      intronic
chr10:98647199(+) A-I      intronic
chr10:98647173(+) A-I      intronic
chr10:98647116(+) A-I      intronic
chr10:98647108(+) A-I      intronic
chr10:98645818(+) A-I      intronic
chr10:98645709(+) A-I      intronic
chr10:98645704(+) A-I      intronic
chr10:98643024(+) A-I      intronic
chr10:98642978(+) A-I      intronic
chr10:98640429(+) A-I      intronic
chr10:98640402(+) A-I      intronic
chr10:98640338(+) A-I      intronic
chr10:98640284(+) A-I      intronic
chr10:98639654(+) A-I      intronic
chr10:98639648(+) A-I      intronic
chr10:98639622(+) A-I      intronic
chr10:98639519(+) A-I      intronic
chr10:98638695(+) A-I      intronic
chr10:98637572(+) A-I      intronic
chr10:98637534(+) A-I      intronic
chr10:98637508(+) A-I      intronic
chr10:98637486(+) A-I      intronic
chr10:98637120(+) A-I      intronic
chr10:98637071(+) A-I      intronic
chr10:98637057(+) A-I      intronic
chr10:98636616(+) A-I      intronic
chr10:98636608(+) A-I      intronic
chr10:98635603(+) A-I      intronic
chr10:98635583(+) A-I      intronic
chr10:98635058(+) A-I      intronic
chr10:98634982(+) A-I      intronic
chr10:98634924(+) A-I      intronic
chr10:98634654(+) A-I      intronic
chr10:98634575(+) A-I      intronic
chr10:98634560(+) A-I      intronic
chr10:98634531(+) A-I      intronic
chr10:98634512(+) A-I      intronic
chr10:98634417(+) A-I      intronic
chr10:98633499(+) A-I      intronic
chr10:98633489(+) A-I      intronic
chr10:98632394(+) A-I      intronic
chr10:98632348(+) A-I      intronic
chr10:98632274(+) A-I      intronic
chr10:98632242(+) A-I      intronic
chr10:98632237(+) A-I      intronic
chr10:98630947(+) A-I      intronic
chr10:98630940(+) A-I      intronic
chr10:98630916(+) A-I      intronic
chr10:98630913(+) A-I      intronic
chr10:98629945(+) A-I      intronic
chr10:98629932(+) A-I      intronic
chr10:98629458(+) A-I      intronic
chr10:98628835(+) A-I      intronic
chr10:98628792(+) A-I      intronic
chr10:98628688(+) A-I      intronic
chr10:98628255(+) A-I      intronic
chr10:98628112(+) A-I      intronic
chr10:98627781(+) A-I      intronic
chr10:98627698(+) A-I      intronic
chr10:98627690(+) A-I      intronic
chr10:98627412(+) A-I      intronic
chr10:98627295(+) A-I      intronic
chr10:98627256(+) A-I      intronic
chr10:98627250(+) A-I      intronic
chr10:98627223(+) A-I      intronic
chr10:98627121(+) A-I      intronic
chr10:98627104(+) A-I      intronic
chr10:98627099(+) A-I      intronic
chr10:98626843(+) A-I      intronic
chr10:98626823(+) A-I      intronic
chr10:98626818(+) A-I      intronic
chr10:98626799(+) A-I      intronic
chr10:98626595(+) A-I      intronic
chr10:98626555(+) A-I      intronic
chr10:98626431(+) A-I      intronic
chr10:98626425(+) A-I      intronic
chr10:98625594(+) A-I      intronic
chr10:98625572(+) A-I      intronic
chr10:98625537(+) A-I      intronic
chr10:98616013(+) A-I      intronic
chr10:98613000(+) A-I      intronic
chr10:98612909(+) A-I      intronic
chr10:98612908(+) A-I      intronic
chr10:98612888(+) A-I      intronic
chr10:98611918(+) A-I      intronic
chr10:98611910(+) A-I      intronic
chr10:98611898(+) A-I      intronic
chr10:98611897(+) A-I      intronic
chr10:98609092(+) A-I      intronic
chr10:98608931(+) A-I      intronic
chr10:98608250(+) A-I      intronic
chr10:98608151(+) A-I      intronic
chr10:98607495(+) A-I      intronic
chr10:98607365(+) A-I      intronic
chr10:98606905(+) A-I      intronic
chr10:98606192(+) A-I      intronic
chr10:98605853(+) A-I      intronic
chr10:98605814(+) A-I      intronic
chr10:98605813(+) A-I      intronic
chr10:98605786(+) A-I      intronic
chr10:98605763(+) A-I      intronic
chr10:98605725(+) A-I      intronic
chr10:98605485(+) A-I      intronic
chr10:98605467(+) A-I      intronic
chr10:98604091(+) A-I      intronic
chr10:98602649(+) A-I      intronic
chr10:98602529(+) A-I      intronic
chr10:98602517(+) A-I      intronic
chr10:98602505(+) A-I      intronic
chr10:98602407(+) A-I      intronic
chr10:98602058(+) A-I      intronic
chr10:98602048(+) A-I      intronic
chr10:98601993(+) A-I      intronic
chr10:98601991(+) A-I      intronic
chr10:98601933(+) A-I      intronic
chr10:98601903(+) A-I      intronic
chr10:98601897(+) A-I      intronic
chr10:98601881(+) A-I      intronic
chr10:98601379(+) A-I      intronic
chr10:98601301(+) A-I      intronic
chr10:98601298(+) A-I      intronic
chr10:98601284(+) A-I      intronic
chr10:98601283(+) A-I      intronic
chr10:98601182(+) A-I      intronic
chr10:98601168(+) A-I      intronic
chr10:98600883(+) A-I      intronic
chr10:98600835(+) A-I      intronic
chr10:98600671(+) A-I      intronic
chr10:98600655(+) A-I      intronic
chr10:98600780(+) A-I      intronic
chr10:98627444(+) A-I      intronic
chr10:98608166(+) A-I      intronic
chr10:98627128(+) A-I      intronic
chr10:98627311(+) A-I      intronic
chr10:98606111(+) A-I      intronic
chr10:98695039(+) A-I      intronic
chr10:98632311(+) A-I      intronic
chr10:98647712(+) A-I      intronic
chr10:98653978(+) A-I      intronic
chr10:98601994(+) A-I      intronic
chr10:98634922(+) A-I      intronic
chr10:98674084(+) A-I      intronic
chr10:98637644(+) A-I      intronic
chr10:98633460(+) A-I      intronic
chr10:98601211(+) A-I      intronic
chr10:98625446(+) A-I      intronic
chr10:98609201(+) A-I      intronic
chr10:98647537(+) A-I      intronic
chr10:98627076(+) A-I      intronic
chr10:98601222(+) A-I      intronic
chr10:98625445(+) A-I      intronic
chr10:98625510(+) A-I      intronic
chr10:98647869(+) A-I      intronic
chr10:98636626(+) A-I      intronic
chr10:98605486(+) A-I      intronic
chr10:98673414(+) A-I      intronic
chr10:98653399(+) A-I      intronic
chr10:98653918(+) A-I      intronic
chr10:98630840(+) A-I      intronic
chr10:98605785(+) A-I      intronic
chr10:98694410(+) A-I      intronic
chr10:98612099(+) A-I      intronic
chr10:98602001(+) A-I      intronic
chr10:98608295(+) A-I      intronic
chr10:98634667(+) A-I      intronic
chr10:98673493(+) A-I      intronic
chr10:98626461(+) A-I      intronic
chr10:98673600(+) A-I      intronic
chr10:98611968(+) A-I      intronic
chr10:98601942(+) A-I      intronic
chr10:98695516(+) A-I      intronic
chr10:98628716(+) A-I      intronic
chr10:98655732(+) A-I      intronic
chr10:98606956(+) A-I      intronic
chr10:98605844(+) A-I      intronic
chr10:98675060(+) A-I      intronic
chr10:98637117(+) A-I      intronic
chr10:98653260(+) A-I      intronic
chr10:98606091(+) A-I      intronic
chr10:98626435(+) A-I      intronic
chr10:98628694(+) A-I      intronic
chr10:98605431(+) A-I      intronic
chr10:98635341(+) A-I      intronic
chr10:98605951(+) A-I      intronic
chr10:98632399(+) A-I      intronic
chr10:98635062(+) A-I      intronic
chr10:98675023(+) A-I      intronic
chr10:98606223(+) A-I      intronic
chr10:98695511(+) A-I      intronic
chr10:98601996(+) A-I      intronic
chr10:98647979(+) A-I      intronic
chr10:98601270(+) A-I      intronic
chr10:98632361(+) A-I      intronic
chr10:98647612(+) A-I      intronic
chr10:98650110(+) A-I      intronic
chr10:98697311(+) A-I      intronic
chr10:98675794(+) A-I      intronic
chr10:98602005(+) A-I      intronic
chr10:98625484(+) A-I      intronic
chr10:98638693(+) A-I      intronic
chr10:98606062(+) A-I      intronic
chr10:98634499(+) A-I      intronic
chr10:98694439(+) A-I      intronic
chr10:98695439(+) A-I      intronic
chr10:98632251(+) A-I      intronic
chr10:98653364(+) A-I      intronic
chr10:98695438(+) A-I      intronic
chr10:98605793(+) A-I      intronic
chr10:98628238(+) A-I      intronic
chr10:98626873(+) A-I      intronic
chr10:98645897(+) A-I      intronic
chr10:98637575(+) A-I      intronic
chr10:98648015(+) A-I      intronic
chr10:98630030(+) A-I      intronic
chr10:98633527(+) A-I      intronic
chr10:98695396(+) A-I      intronic
chr10:98603125(+) A-I      intronic
chr10:98628161(+) A-I      intronic
chr10:98635531(+) A-I      intronic
chr10:98629246(+) A-I      intronic
chr10:98601950(+) A-I      intronic
chr10:98674033(+) A-I      intronic
chr10:98627771(+) A-I      intronic
chr10:98661639(+) A-I      intronic
chr10:98634632(+) A-I      intronic
chr10:98607433(+) A-I      intronic
chr10:98602488(+) A-I      intronic
chr10:98653359(+) A-I      intronic
chr10:98699675(+) A-I      intronic
chr10:98699627(+) A-I      intronic
chr10:98699543(+) A-I      intronic
chr10:98699535(+) A-I      intronic
chr10:98699533(+) A-I      intronic
chr10:98697762(+) A-I      intronic
chr10:98695462(+) A-I      intronic
chr10:98695441(+) A-I      intronic
chr10:98695023(+) A-I      intronic
chr10:98694929(+) A-I      intronic
chr10:98694488(+) A-I      intronic
chr10:98694398(+) A-I      intronic
chr10:98676050(+) A-I      intronic
chr10:98676049(+) A-I      intronic
chr10:98676035(+) A-I      intronic
chr10:98676010(+) A-I      intronic
chr10:98675203(+) A-I      intronic
chr10:98675061(+) A-I      intronic
chr10:98674134(+) A-I      intronic
chr10:98674040(+) A-I      intronic
chr10:98673406(+) A-I      intronic
chr10:98668679(+) A-I      intronic
chr10:98668671(+) A-I      intronic
chr10:98668648(+) A-I      intronic
chr10:98661601(+) A-I      intronic
chr10:98656378(+) A-I      intronic
chr10:98656307(+) A-I      intronic
chr10:98656306(+) A-I      intronic
chr10:98653381(+) A-I      intronic
chr10:98609155(+) A-I      intronic
chr10:98653361(+) A-I      intronic
chr10:98653355(+) A-I      intronic
chr10:98699466(+) A-I      intronic
chr10:98600786(+) A-I      intronic
chr10:98676501(+) A-I      intronic
chr10:98627309(+) A-I      intronic
chr10:98675163(+) A-I      intronic
chr10:98632331(+) A-I      intronic
chr10:98603164(+) A-I      intronic
chr10:98647627(+) A-I      intronic
chr10:98713220(+) A-I      intronic
chr10:98675098(+) A-I      intronic
chr10:98655692(+) A-I      intronic
chr10:98630042(+) A-I      intronic
chr10:98605709(+) A-I      intronic
chr10:98693543(+) A-I      intronic
chr10:98602031(+) A-I      intronic
chr10:98603094(+) A-I      intronic
chr10:98695470(+) A-I      intronic
chr10:98647143(+) A-I      intronic
chr10:98602527(+) A-I      intronic
chr10:98602063(+) A-I      intronic
chr10:98667977(+) A-I      intronic
chr10:98637170(+) A-I      intronic
chr10:98634640(+) A-I      intronic
chr10:98601992(+) A-I      intronic
chr10:98627247(+) A-I      intronic
chr10:98626471(+) A-I      intronic
chr10:98673450(+) A-I      intronic
chr10:98625412(+) A-I      intronic
chr10:98607378(+) A-I      intronic
chr10:98695520(+) A-I      intronic
chr10:98695432(+) A-I      intronic
chr10:98634534(+) A-I      intronic
chr10:98656229(+) A-I      intronic
chr10:98673500(+) A-I      intronic
chr10:98653464(+) A-I      intronic
chr10:98673416(+) A-I      intronic
chr10:98627375(+) A-I      intronic
chr10:98636641(+) A-I      intronic
chr10:98697309(+) A-I      intronic
chr10:98612107(+) A-I      intronic
chr10:98622050(+) A-I      intronic
chr10:98702982(+) A-I      intronic
chr10:98627317(+) A-I      intronic
chr10:98669866(+) A-I      intronic
chr10:98695035(+) A-I      intronic
chr10:98695047(+) A-I      intronic
chr10:98675135(+) A-I      intronic
chr10:98601257(+) A-I      intronic
chr10:98637025(+) A-I      intronic
chr10:98675193(+) A-I      intronic
chr10:98632327(+) A-I      intronic
chr10:98695471(+) A-I      intronic
chr10:98608263(+) A-I      intronic
chr10:98626824(+) A-I      intronic
chr10:98602132(+) A-I      intronic
chr10:98626989(+) A-I      intronic
chr10:98634917(+) A-I      intronic
chr10:98603080(+) A-I      intronic
chr10:98635460(+) A-I      intronic
chr10:98627374(+) A-I      intronic
chr10:98675995(+) A-I      intronic
chr10:98605778(+) A-I      intronic
chr10:98635466(+) A-I      intronic
chr10:98632263(+) A-I      intronic
chr10:98605727(+) A-I      intronic
chr10:98695045(+) A-I      intronic
chr10:98608892(+) A-I      intronic
chr10:98675167(+) A-I      intronic
chr10:98627759(+) A-I      intronic
chr10:98668537(+) A-I      intronic
chr10:98655802(+) A-I      intronic
chr10:98647868(+) A-I      intronic
chr10:98654032(+) A-I      intronic
chr10:98632194(+) A-I      intronic
chr10:98601225(+) A-I      intronic
chr10:98607387(+) A-I      intronic
chr10:98674049(+) A-I      intronic
chr10:98601179(+) A-I      intronic
chr10:98629461(+) A-I      intronic
chr10:98648042(+) A-I      intronic
chr10:98655696(+) A-I      intronic
chr10:98636495(+) A-I      intronic
chr10:98654046(+) A-I      intronic
chr10:98606790(+) A-I      intronic
chr10:98635606(+) A-I      intronic
chr10:98629843(+) A-I      intronic
chr10:98647078(+) A-I      intronic
chr10:98637498(+) A-I      intronic
chr10:98635539(+) A-I      intronic
chr10:98628926(+) A-I      intronic
chr10:98638719(+) A-I      intronic
chr10:98606065(+) A-I      intronic
chr10:98627741(+) A-I      intronic
chr10:98674002(+) A-I      intronic
chr10:98647690(+) A-I      intronic
chr10:98606124(+) A-I      intronic
chr10:98601898(+) A-I      intronic
chr10:98606176(+) A-I      intronic
chr10:98603073(+) A-I      intronic
chr10:98695072(+) A-I      intronic
chr10:98605749(+) A-I      intronic
chr10:98605754(+) A-I      intronic
chr10:98600826(+) A-I      intronic
chr10:98637510(+) A-I      intronic
chr10:98605711(+) A-I      intronic
chr10:98653966(+) A-I      intronic
chr10:98612032(+) A-I      intronic
chr10:98655693(+) A-I      intronic
chr10:98637026(+) A-I      intronic
chr10:98647877(+) A-I      intronic
chr10:98616309(+) A-I      intronic
chr10:98602000(+) A-I      intronic
chr10:98637550(+) A-I      intronic
chr10:98627389(+) A-I      intronic
chr10:98668012(+) A-I      intronic
chr10:98625552(+) A-I      intronic
chr10:98637130(+) A-I      intronic
chr10:98607364(+) A-I      intronic
chr10:98610338(+) A-I      intronic
chr10:98695086(+) A-I      intronic
chr10:98639641(+) A-I      intronic
chr10:98675918(+) A-I      intronic
chr10:98609037(+) A-I      intronic
chr10:98601610(+) A-I      intronic
chr10:98627144(+) A-I      intronic
chr10:98634994(+) A-I      intronic
chr10:98693549(+) A-I      intronic
chr10:98654014(+) A-I      intronic
chr10:98608268(+) A-I      intronic
chr10:98635363(+) A-I      intronic
chr10:98606823(+) A-I      intronic
chr10:98695524(+) A-I      intronic
chr10:98626534(+) A-I      intronic
chr10:98637473(+) A-I      intronic
chr10:98608997(+) A-I      intronic
chr10:98647567(+) A-I      intronic
chr10:98616399(+) A-I      intronic
chr10:98626837(+) A-I      intronic
chr10:98647595(+) A-I      intronic
chr10:98637630(+) A-I      intronic
chr10:98675853(+) A-I      intronic
chr10:98637210(+) A-I      intronic
chr10:98601875(+) A-I      intronic
chr10:98602572(+) A-I      intronic
chr10:98608894(+) A-I      intronic
chr10:98608186(+) A-I      intronic
chr10:98648063(+) A-I      intronic
chr10:98605700(+) A-I      intronic
chr10:98606149(+) A-I      intronic
chr10:98653358(+) A-I      intronic
chr10:98628253(+) A-I      intronic
chr10:98626607(+) A-I      intronic
chr10:98647699(+) A-I      intronic
chr10:98605498(+) A-I      intronic
chr10:98634989(+) A-I      intronic
chr10:98603142(+) A-I      intronic
chr10:98675987(+) A-I      intronic
chr10:98639694(+) A-I      intronic
chr10:98626432(+) A-I      intronic
chr10:98634645(+) A-I      intronic
chr10:98674094(+) A-I      intronic
chr10:98626530(+) A-I      intronic
chr10:98602092(+) A-I      intronic
chr10:98625511(+) A-I      intronic
chr10:98632362(+) A-I      intronic
chr10:98629909(+) A-I      intronic
chr10:98637135(+) A-I      intronic
chr10:98627279(+) A-I      intronic
chr10:98628699(+) A-I      intronic
chr10:98600797(+) A-I      intronic
chr10:98654023(+) A-I      intronic
chr10:98655658(+) A-I      intronic
chr10:98606942(+) A-I      intronic
chr10:98647691(+) A-I      intronic
chr10:98629862(+) A-I      intronic
chr10:98673587(+) A-I      intronic
chr10:98675131(+) A-I      intronic
chr10:98625528(+) A-I      intronic
chr10:98634556(+) A-I      intronic
chr10:98653283(+) A-I      intronic
chr10:98634964(+) A-I      intronic
chr10:98633459(+) A-I      intronic
chr10:98601999(+) A-I      intronic
chr10:98648028(+) A-I      intronic
chr10:98631396(+) A-I      intronic
chr10:98632243(+) A-I      intronic
chr10:98601952(+) A-I      intronic
chr10:98634987(+) A-I      intronic
chr10:98655724(+) A-I      intronic
chr10:98635364(+) A-I      intronic
chr10:98602037(+) A-I      intronic
chr10:98600821(+) A-I      intronic
chr10:98667876(+) A-I      intronic
chr10:98609006(+) A-I      intronic
chr10:98647494(+) A-I      intronic
chr10:98674137(+) A-I      intronic
chr10:98635424(+) A-I      intronic
chr10:98633440(+) A-I      intronic
chr10:98599642(+) A-I      intronic
chr10:98606950(+) A-I      intronic
chr10:98647471(+) A-I      intronic
chr10:98608895(+) A-I      intronic
chr10:98629919(+) A-I      intronic
chr10:98647564(+) A-I      intronic
chr10:98675157(+) A-I      intronic
chr10:98600774(+) A-I      intronic
chr10:98675097(+) A-I      intronic
chr10:98605777(+) A-I      intronic
chr10:98609093(+) A-I      intronic
chr10:98695440(+) A-I      intronic
chr10:98636635(+) A-I      intronic
chr10:98655607(+) A-I      intronic
chr10:98606824(+) A-I      intronic
chr10:98695476(+) A-I      intronic
chr10:98629432(+) A-I      intronic
chr10:98661636(+) A-I      intronic
chr10:98627107(+) A-I      intronic
chr10:98632285(+) A-I      intronic
chr10:98605768(+) A-I      intronic
chr10:98627243(+) A-I      intronic
chr10:98632387(+) A-I      intronic
chr10:98695006(+) A-I      intronic
chr10:98632264(+) A-I      intronic
chr10:98635521(+) A-I      intronic
chr10:98634524(+) A-I      intronic
chr10:98605735(+) A-I      intronic
chr10:98695525(+) A-I      intronic
chr10:98608971(+) A-I      intronic
chr10:98647465(+) A-I      intronic
chr10:98626497(+) A-I      intronic
chr10:98635030(+) A-I      intronic
chr10:98626449(+) A-I      intronic
chr10:98634887(+) A-I      intronic
chr10:98627299(+) A-I      intronic
chr10:98655778(+) A-I      intronic
chr10:98627396(+) A-I      intronic
chr10:98608259(+) A-I      intronic
chr10:98628843(+) A-I      intronic
chr10:98629252(+) A-I      intronic
chr10:98695444(+) A-I      intronic
chr10:98647502(+) A-I      intronic
chr10:98653244(+) A-I      intronic
chr10:98605817(+) A-I      intronic
chr10:98606116(+) A-I      intronic
chr10:98648056(+) A-I      intronic
chr10:98627274(+) A-I      intronic
chr10:98653923(+) A-I      intronic
chr10:98601221(+) A-I      intronic
chr10:98626533(+) A-I      intronic
chr10:98601609(+) A-I      intronic
chr10:98627721(+) A-I      intronic
chr10:98673534(+) A-I      intronic
chr10:98601944(+) A-I      intronic
chr10:98636576(+) A-I      intronic
chr10:98635508(+) A-I      intronic
chr10:98653250(+) A-I      intronic
chr10:98608262(+) A-I      intronic
chr10:98648043(+) A-I      intronic
chr10:98627395(+) A-I      intronic
chr10:98626394(+) A-I      intronic
chr10:98647599(+) A-I      intronic
chr10:98629517(+) A-I      intronic
chr10:98626861(+) A-I      intronic
chr10:98628756(+) A-I      intronic
chr10:98633533(+) A-I      intronic
chr10:98648067(+) A-I      intronic
chr10:98634655(+) A-I      intronic
chr10:98610407(+) A-I      intronic
chr10:98610427(+) A-I      intronic
chr10:98653362(+) A-I      intronic
chr10:98626458(+) A-I      intronic
chr10:98627472(+) A-I      intronic
chr10:98673454(+) A-I      intronic
chr10:98636686(+) A-I      intronic
chr10:98695480(+) A-I      intronic
chr10:98629376(+) A-I      intronic
chr10:98649940(+) A-I      intronic
chr10:98637079(+) A-I      intronic
chr10:98600803(+) A-I      intronic
chr10:98673501(+) A-I      intronic
chr10:98630943(+) A-I      intronic
chr10:98647507(+) A-I      intronic
chr10:98607372(+) A-I      intronic
chr10:98675928(+) A-I      intronic
chr10:98602481(+) A-I      intronic
chr10:98601879(+) A-I      intronic
chr10:98626844(+) A-I      intronic
chr10:98628802(+) A-I      intronic
chr10:98602073(+) A-I      intronic
chr10:98637430(+) A-I      intronic
chr10:98653360(+) A-I      intronic
chr10:98608205(+) A-I      intronic
chr10:98699599(+) A-I      intronic
chr10:98610098(+) A-I      intronic
chr10:98606105(+) A-I      intronic
chr10:98632188(+) A-I      intronic
chr10:98634864(+) A-I      intronic
chr10:98634954(+) A-I      intronic
chr10:98607264(+) A-I      intronic
chr10:98654114(+) A-I      intronic
chr10:98612104(+) A-I      intronic
chr10:98636632(+) A-I      intronic
chr10:98611992(+) A-I      intronic
chr10:98637196(+) A-I      intronic
chr10:98634397(+) A-I      intronic
chr10:98626386(+) A-I      intronic
chr10:98638594(+) A-I      intronic
chr10:98605914(+) A-I      intronic
chr10:98634662(+) A-I      intronic
chr10:98634615(+) A-I      intronic
chr10:98610051(+) A-I      intronic
chr10:98600639(+) A-I      intronic
chr10:98610052(+) A-I      intronic
chr10:98647538(+) A-I      intronic
chr10:98627722(+) A-I      intronic
chr10:98605843(+) A-I      intronic
chr10:98627012(+) A-I      intronic
chr10:98671542(+) A-I      intronic
chr10:98632321(+) A-I      intronic
chr10:98628727(+) A-I      intronic
chr10:98632315(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED LCOR
chr10:98605843(+) A-I intron -    22327324
chr10:98605844(+) A-I intron -    22327324
chr10:98627144(+) A-I intron -    22327324
chr10:98610051(+) A-G intron -    22484847
chr10:98610052(+) A-G intron -    22484847
chr10:98671542(+) A-G intron -    22484847
chr10:98602132(+) A-G intron -    22484847
chr10:98606823(+) A-G intron -    22484847
chr10:98606824(+) A-G intron -    22484847
chr10:98606956(+) A-G intron -    22484847
chr10:98627144(+) A-G intron -    22484847
chr10:98627274(+) A-G intron -    22484847
chr10:98627317(+) A-G intron -    22484847
chr10:98632188(+) A-G intron -    22484847
chr10:98632194(+) A-G intron -    22484847
chr10:98635341(+) A-G intron -    22484847
chr10:98635363(+) A-G intron -    22484847
chr10:98635364(+) A-G intron -    22484847
chr10:98635606(+) A-G intron -    22484847
chr10:98653364(+) A-G intron -    22484847
chr10:98653399(+) A-G intron -    22484847
chr10:98695471(+) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase LCOR
chr10:98708875-98708876(+) m6A CDS//exon       24284625//24981863
chr10:98708902-98708903(+) m6A CDS//exon       24284625//24981863
chr10:98708962-98708963(+) m6A CDS//exon       24981863
chr10:98708978-98708979(+) m6A CDS//exon       24981863
chr10:98714721-98714722(+) m6A CDS//intron       -
chr10:98714745-98714746(+) m6A CDS//intron       24981863//22608085
chr10:98714791-98714792(+) m6A CDS//intron       24284625//25456834//24981863//22608085
chr10:98714808-98714809(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085
chr10:98714862-98714863(+) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr10:98714876-98714877(+) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr10:98714928-98714929(+) m6A CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr10:98714967-98714968(+) m6A CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr10:98715056-98715057(+) m6A CDS//intron       24284625//24209618//24981863//22575960//22608085
chr10:98715090-98715091(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085
chr10:98715270-98715271(+) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//22608085
chr10:98715300-98715301(+) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//22608085
chr10:98715342-98715343(+) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr10:98715374-98715375(+) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr10:98715417-98715418(+) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr10:98715560-98715561(+) m6A CDS//intron       24284625//24209618//24981863//27773535//22608085
chr10:98715709-98715710(+) m6A 3'UTR//intron       24209618//24981863//22608085
chr10:98715937-98715938(+) m6A 3'UTR//intron       24981863//22608085
chr10:98715955-98715956(+) m6A 3'UTR//intron       24981863//22608085
chr10:98716055-98716056(+) m6A 3'UTR//intron       24209618//24981863//22608085
chr10:98716074-98716075(+) m6A 3'UTR//intron       24209618//24981863//22608085
chr10:98716178-98716179(+) m6A 3'UTR//intron       24981863//22608085
chr10:98716190-98716191(+) m6A 3'UTR//intron       24981863//22608085
chr10:98716200-98716201(+) m6A 3'UTR//intron       24981863//22608085
chr10:98716207-98716208(+) m6A 3'UTR//intron       24981863//22608085
chr10:98720771-98720772(+) m6A 3'UTR//intron       24981863
chr10:98720834-98720835(+) m6A 3'UTR//intron       24981863
chr10:98740624-98740625(+) m6A exon       24981863
chr10:98740701-98740702(+) m6A exon       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-590-5p
Cytoplasm Breast adenocarcinoma cells (MCF-7)|Cervical adenocarcinoma cells (HeLa)     24918059
Exosome B cell line (Raji)|Primary dendritic cells|T cell line (J77)     21505438
Exosome Human mast cell line (HMC-1)     24009880
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Follicular fluid     23666971
Microvesicle Mesenchymal stem cells     -
Mitochondrion Skeletal muscle myoblasts     21637849
Nucleus Breast adenocarcinoma cells (MCF-7)|Cervical adenocarcinoma cells (HeLa)     24918059
Nucleus Neural progenitor cells     21363885
LCOR
Chromatin K562 cells     -
Cytosol HCC cell line (HepG2)     -
Exosome Blood     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)|K562 cells     -
Ribosome Colon cancer cells     24393600

Related Drug Information:


Resource Symbol Drug Name PubChem
ID
Function
ncDR hsa-miR-590-5p
Sensorad 99342 Drug sensitive
Gardenin B 96539 Drug sensitive
2,5-Dimethyl-1,4-benzoquinone 8718 Drug sensitive
Acid Green 27 80837 Drug sensitive
Morpholine-N-dithiocarbamate 72675 Drug sensitive
Berberine iodide 72350 Drug sensitive
Sulbentine 67686 Drug sensitive
Laurolinium acetate 67354 Drug sensitive
Dihydroartemisinyl ether, stereoisomer of NSC-685989 6712439 Drug sensitive
Acnistin F 6712173 Drug sensitive
Verrucarin A 6326658 Drug sensitive
Verrucarin A, 3'-(acetyloxy)-7'-deoxo-2'-deoxy-4'-hydroxy-7'-(1-hydroxyethyl)- 5933240 Drug sensitive
8B-Hydroxy-9B,10B-epoxyverrucarin A 5477536 Drug sensitive
Caracemide 54747 Drug sensitive
Artelasticin 5471311 Drug sensitive
(Z)-1-Iodo-2-phenyl-1-penten-3-one 5468684 Drug sensitive
3,19-(4-Acetamido)benzylidineandrographolide 54612901 Drug sensitive
Herveline O 5459269 Drug sensitive
Cuspidatin C 5459164 Drug sensitive
Thiram 5455 Drug sensitive
(E)-1-(2,5-Dihydroxyphenyl)ethene-2-isonitrile 5388136 Drug sensitive
(1E,4E)-1,5-Dipyridin-3-ylpenta-1,4-dien-3-one 5382674 Drug sensitive
Ovatifolin acetate 5358419 Drug sensitive
Indanthren Corinth RK 5351878 Drug sensitive
Herbimycin 5311102 Drug sensitive
Vorinostat 5311 Drug sensitive
6-Methoxy-7-(2lambda(5)-1,2-triazadienyl)-5,8-quinolinedione 494043 Drug sensitive
Asimicinone 393461 Drug sensitive
2-(1-Propynyl)estradiol 388008 Drug sensitive
Acetic acid,4,7,10-tetraazacyclododecane-1,7-diyl]bis 387352 Drug sensitive
4-Phenacyloxychromen-2-one 386272 Drug resistant
(-)7,8-Dihydrocalanolide A 383107 Drug sensitive
1-Azido-2-phenyl-3-phenalenone 381891 Drug sensitive
(1R)-3,3-Dibromocamphor 376765 Drug sensitive
3,8-Dimethyl-1,2-naphthoquinone 373912 Drug sensitive
Antineoplastic-645804 371505 Drug sensitive
1-(4-Methoxy-2-methylphenyl)naphtho[1,2-c]furan-3(1H)-one 369148 Drug sensitive
Aplidazole C . TFA 362402 Drug sensitive
Thiosangivamycin 3580213 Drug sensitive
Bis(helenalinyl)glutarate 336831 Drug sensitive
6-(4-Chlorophenyl)sulfanylquinazoline-2,4-diamine 328131 Drug sensitive
2,3-Dimethoxy-5-naphthalen-2-ylsulfanylcyclohexa-2,5-diene-1,4-dione 314728 Drug sensitive
Antimycin A3 245869 Drug sensitive
(2-Methoxy-9,10-dihydrophenanthren-3-yl)methyl-dimethyl-(phenylsulfanylmethyl)azanium;bromide 24200489 Drug sensitive
[(4E,6Z,10Z)-20,22-Dihydroxy-13,14,17-trimethoxy-4,8,10,12,16-pentamethyl-3-oxo-2-azabicyclo[16.3.1]docosa-1(21),4,6,10,18(22),19-hexaen-9-yl] carbamate 24199492 Drug sensitive
Antibiotic U 29135 24196291 Drug sensitive
7-Fluoro-2-benzoyl-3-trifluoromethylquioxaline 1,4-dioxide 23635154 Drug sensitive
Drostanolone propionate 224004 Drug sensitive
Kinetin riboside 20345 Drug resistant
Methyl 1,6,8,14a-tetrahydroxy-11-[(4-hydroxy-3,5-dimethoxy-6-methyloxan-2-yl)amino]-6a-methoxy-3-methyl-7,9,12,14-tetraoxo-5,6-dihydrobenzo[a]tetracene-2-carboxylate 197261 Drug sensitive
4-Chloro-5-(pyridin-2-ylthio)-3H-1,2-dithiole-3-thione 16766538 Drug sensitive
4H-1,3,2-Benzodioxastannin-4-one, 7-amino-2,2-diphenyl- 16683127 Drug sensitive
Dihydroartemisinin (mixture of alpha and beta isomers) 16399850 Drug sensitive
Triethyltin chloride 13820 Drug sensitive
Astrazon Orange R 135747272 Drug sensitive
(1R,2S,5S,8S,9S,17R,18R,21S,24R,26S,27S)-14-Chloro-5,15-dihydroxy-2,9,26-trimethyl-3,19,23,28-tetraoxaoctacyclo[16.9.1.118,27.01,5.02,24.08,17.09,14.021,26]nonacos-11-ene-4,10,22,29-tetrone 134715214 Drug sensitive
Melampodinin 11953936 Drug sensitive
Unii-C616DV5Y11 117587576 Drug sensitive
Cyanoaminopyranopyridine derivatives 11494577 Drug resistant
Unii-9JU14BJ5QG 109374088 Drug sensitive
Cladospirone bisepoxide 10316810 Drug sensitive
Fusariotoxin T-2 102515111 Drug sensitive
15,16-Dihydrocuracin A 101683509 Drug sensitive
(1S,3R,6R,12S,14R,15S,18R,19E,21Z,25R,26S,27R)-6,15-Dihydroxy-18-[(1R)-1-hydroxyethyl]-5,14,26-trimethylspiro[2,10,13,17,24-pentaoxapentacyclo[23.2.1.03,8.08,26.012,14]octacosa-4,19,21-triene-27,2'-oxirane]-11,23-dione 101307863 Drug sensitive
Chimaphilin 101211 Drug sensitive
(3Z,4R)-4-Hydroxy-3-[2-[(1S,3R)-3-[2-[(1S,3S,3'R,4S)-1-hydroxy-4,6,6-trimethylspiro[2,5-dioxabicyclo[2.2.2]octane-3,6'-oxane]-3'-yl]ethyl]-2,2-dimethyl-6-methylidenecyclohexyl]ethylidene]oxolan-2-one 101206903 Drug sensitive
1,4-benzenediamine (9ci), n-butyl-n'-phenyl- - Drug sensitive
1h-1,4,7-triazonine-1,4,7-triacetic acid, octahydro- - Drug sensitive
1h-1,4,7-triazonine-1,4-diacetic acid, octahydro- - Drug sensitive
1-piperidinecarbodithioic acid, antimony complex - Drug sensitive
4'-deoxy-13',17-dinitro-3',4'-epoxy-vincaleukoblastine - Drug sensitive
4-morpholinecarbodithioic acid, antimony complex - Drug sensitive
4-thiomorpholinecarbodithioic acid, antimony complex - Drug sensitive
7-n,n-dimethylamino brefeldin a hydrochloride - Drug sensitive
9h-purine, 2-amino-6-(2,4-dichlorobenzylthio)-9-isobutyl- - Drug sensitive
anthracen-9-one, 10-[(2-methoxyphenyl)methylene]- - Drug sensitive
benzamide, 5-bromo-2-hydroxy-n-[3-(trifluoromethyl)phenyl]- - Drug sensitive
benzonitrile, 2-amino-3,5-dinitro- (9ci) - Drug sensitive
cyclohexanone, 2,6-bis(piperidinomethyl)- - Drug sensitive
geldanamycin, n,n'-dimethyl - Drug sensitive
gold(1+), bis(trimethylphosphine)-, chloride - Drug sensitive
iodonium, (4-methoxyphenyl)(3-methylphenyl)-, bromide - Drug sensitive
roridin a, 8-hydroxy-9b,10b-epoxy- - Drug sensitive
uridine, 5-isobutyl-2'-deoxy- - Drug sensitive
(Z)-6-chloro-3-((2-(4-methoxyphenyl)-3H-benzo[d]imidazol-5-yl)methylene)indolin-2-one - Drug sensitive
1-[(2-phenylethoxy)methyl]-5-ethyl-6-(phenylseleno)uracil - Drug sensitive
2-(4-hydroxy-benzylidene)-2-(2-pyridyl)acetonitrile - Drug sensitive
9-(3-fluorobenzyl)-7-(3-fluorobenzyloxy)-2-(4-fluorobenzyl)-1-methyl-9H-beta-carbolinium bromide - Drug sensitive
antineoplastic-615538 - Drug sensitive
antineoplastic-644916 - Drug sensitive
bavachyaone - Drug sensitive
geldanamycin analog - Drug sensitive
isatin dr - Drug sensitive
thiadiazines - Drug sensitive
Resource Symbol Drug Name PubChem
ID
Function Link  
RNAInter hsa-miR-590-5p
Nicotine 89594 Drug interaction    RC00006067
Formaldehyde 712 Drug interaction    RC00006061
Gemcitabine 60750 Drug interaction    RC00006066
5-Fluorouracil 3385 Drug interaction    RC00006064
Doxorubicin 31703 Drug interaction    RC00006065
cis-Diaminedichloroplatinum 2767 Drug interaction    RC00006063
Verapamil 2520 Drug interaction    RC00006062
Docetaxel 148124 Drug interaction    RC00006069
Ginsenoside Rh2 119307 Drug interaction    RC00006068
SIOP treatment protocol - Drug interaction    RC00006070
Resource Symbol Drug Name PubChem ID PMID
NoncoRNA hsa-miR-590-5p

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-590-5p
Interactor2: LCOR

Evidence Support:


Weak-Evidence PAR-CLIP
Support Database ViRBase

References:


PMID 22291592 Target region 3'UTR
Source ViRBase Interactor1 expression None
Tissue or cell line EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells Interactor2 expression None
Description We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.

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