Detail Information

Basic Information:


  VIRBase ID:  

HHID00060360

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.5725

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-92b-3p:           GIT2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-92b-3p GIT2
miRBase
Accession/Entrez ID
MIMAT0003218 9815
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - CAT-2//CAT2//PKL

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-92b-3p
rs1235528450 chr1:155195237    T/C
rs12759620 chr1:155195253    G/C
rs1350664926 chr1:155195246    C/T
rs1355214420 chr1:155195256    T/TCCGGCCCCC

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR GIT2
chr12:110427538(-) A-I      NonSyn:Ile->Val
chr12:110379399(-) A-I      intronic
chr12:110379503(-) A-I      intronic
chr12:110408129(-) A-I      intronic
chr12:110379495(-) A-I      intronic
chr12:110379491(-) A-I      intronic
chr12:110379465(-) A-I      intronic
chr12:110379464(-) A-I      intronic
chr12:110408158(-) A-I      intronic
chr12:110374630(-) A-I      intronic
chr12:110379762(-) A-I      intronic
chr12:110381979(-) A-I      intronic
chr12:110379533(-) A-I      intronic
chr12:110377412(-) A-I      intronic
chr12:110380271(-) A-I      intronic
chr12:110381937(-) A-I      intronic
chr12:110381927(-) A-I      intronic
chr12:110406619(-) A-I      intronic
chr12:110406665(-) A-I      intronic
chr12:110406673(-) A-I      intronic
chr12:110406681(-) A-I      intronic
chr12:110377399(-) A-I      intronic
chr12:110397106(-) A-I      intronic
chr12:110404268(-) A-I      intronic
chr12:110404231(-) A-I      intronic
chr12:110404145(-) A-I      intronic
chr12:110403976(-) A-I      intronic
chr12:110403907(-) A-I      intronic
chr12:110403906(-) A-I      intronic
chr12:110414571(-) A-I      intronic
chr12:110379687(-) A-I      intronic
chr12:110379622(-) A-I      intronic
chr12:110379601(-) A-I      intronic
chr12:110398261(-) A-I      intronic
chr12:110379499(-) A-I      intronic
chr12:110373263(-) A-I      intronic
chr12:110414505(-) A-I      intronic
chr12:110394008(-) A-I      intronic
chr12:110396084(-) A-I      intronic
chr12:110422977(-) A-I      intronic
chr12:110381599(-) A-I      intronic
chr12:110397055(-) A-I      intronic
chr12:110411725(-) A-I      intronic
chr12:110380332(-) A-I      intronic
chr12:110407460(-) A-I      intronic
chr12:110381635(-) A-I      intronic
chr12:110411590(-) A-I      intronic
chr12:110422502(-) A-I      intronic
chr12:110381894(-) A-I      intronic
chr12:110380371(-) A-I      intronic
chr12:110380313(-) A-I      intronic
chr12:110394701(-) A-I      intronic
chr12:110381748(-) A-I      intronic
chr12:110391418(-) A-I      intronic
chr12:110381849(-) A-I      intronic
chr12:110397100(-) A-I      intronic
chr12:110380303(-) A-I      intronic
chr12:110374451(-) A-I      intronic
chr12:110380254(-) A-I      intronic
chr12:110380250(-) A-I      intronic
chr12:110397067(-) A-I      intronic
chr12:110380235(-) A-I      intronic
chr12:110379912(-) A-I      intronic
chr12:110379905(-) A-I      intronic
chr12:110379880(-) A-I      intronic
chr12:110396214(-) A-I      intronic
chr12:110378467(-) A-I      intronic
chr12:110379879(-) A-I      intronic
chr12:110379848(-) A-I      intronic
chr12:110380338(-) A-I      intronic
chr12:110381855(-) A-I      intronic
chr12:110381891(-) A-I      intronic
chr12:110379825(-) A-I      intronic
chr12:110381909(-) A-I      intronic
chr12:110381920(-) A-I      intronic
chr12:110379799(-) A-I      intronic
chr12:110398355(-) A-I      intronic
chr12:110415310(-) A-I      intronic
chr12:110379790(-) A-I      intronic
chr12:110413673(-) A-I      intronic
chr12:110381230(-) A-I      intronic
chr12:110381925(-) A-I      intronic
chr12:110377562(-) A-I      intronic
chr12:110416052(-) A-I      intronic
chr12:110371531(-) A-I      intronic
chr12:110430768(-) A-I      intronic
chr12:110372346(-) A-I      intronic
chr12:110430766(-) A-I      intronic
chr12:110430736(-) A-I      intronic
chr12:110377554(-) A-I      intronic
chr12:110429063(-) A-I      intronic
chr12:110425546(-) A-I      intronic
chr12:110372350(-) A-I      intronic
chr12:110372385(-) A-I      intronic
chr12:110425113(-) A-I      intronic
chr12:110425070(-) A-I      intronic
chr12:110425067(-) A-I      intronic
chr12:110424305(-) A-I      intronic
chr12:110423859(-) A-I      intronic
chr12:110423636(-) A-I      intronic
chr12:110423410(-) A-I      intronic
chr12:110381229(-) A-I      intronic
chr12:110423398(-) A-I      intronic
chr12:110422547(-) A-I      intronic
chr12:110422525(-) A-I      intronic
chr12:110422524(-) A-I      intronic
chr12:110422424(-) A-I      intronic
chr12:110422416(-) A-I      intronic
chr12:110422141(-) A-I      intronic
chr12:110372457(-) A-I      intronic
chr12:110422067(-) A-I      intronic
chr12:110425374(-) A-I      intronic
chr12:110380420(-) A-I      intronic
chr12:110422012(-) A-I      intronic
chr12:110378584(-) A-I      intronic
chr12:110378643(-) A-I      intronic
chr12:110380357(-) A-I      intronic
chr12:110380411(-) A-I      intronic
chr12:110377655(-) A-I      intronic
chr12:110377667(-) A-I      intronic
chr12:110378419(-) A-I      intronic
chr12:110378439(-) A-I      intronic
chr12:110378455(-) A-I      intronic
chr12:110378481(-) A-I      intronic
chr12:110378536(-) A-I      intronic
chr12:110378537(-) A-I      intronic
chr12:110378550(-) A-I      intronic
chr12:110378553(-) A-I      intronic
chr12:110379567(-) A-I      intronic
chr12:110378547(-) A-I      intronic
chr12:110378599(-) A-I      intronic
chr12:110414486(-) A-I      intronic
chr12:110379529(-) A-I      intronic
chr12:110379534(-) A-I      intronic
chr12:110378608(-) A-I      intronic
chr12:110378621(-) A-I      intronic
chr12:110379544(-) A-I      intronic
chr12:110378627(-) A-I      intronic
chr12:110378632(-) A-I      intronic
chr12:110417226(-) A-I      intronic
chr12:110417218(-) A-I      intronic
chr12:110417216(-) A-I      intronic
chr12:110379789(-) A-I      intronic
chr12:110416104(-) A-I      intronic
chr12:110416091(-) A-I      intronic
chr12:110381568(-) A-I      intronic
chr12:110378671(-) A-I      intronic
chr12:110379333(-) A-I      intronic
chr12:110379345(-) A-I      intronic
chr12:110379394(-) A-I      intronic
chr12:110416067(-) A-I      intronic
chr12:110415996(-) A-I      intronic
chr12:110415570(-) A-I      intronic
chr12:110415527(-) A-I      intronic
chr12:110415399(-) A-I      intronic
chr12:110415385(-) A-I      intronic
chr12:110415384(-) A-I      intronic
chr12:110372464(-) A-I      intronic
chr12:110415259(-) A-I      intronic
chr12:110415192(-) A-I      intronic
chr12:110415168(-) A-I      intronic
chr12:110415167(-) A-I      intronic
chr12:110414518(-) A-I      intronic
chr12:110372715(-) A-I      intronic
chr12:110379424(-) A-I      intronic
chr12:110379451(-) A-I      intronic
chr12:110414490(-) A-I      intronic
chr12:110414472(-) A-I      intronic
chr12:110413868(-) A-I      intronic
chr12:110412110(-) A-I      intronic
chr12:110372745(-) A-I      intronic
chr12:110404227(-) A-I      intronic
chr12:110372748(-) A-I      intronic
chr12:110413639(-) A-I      intronic
chr12:110381521(-) A-I      intronic
chr12:110411655(-) A-I      intronic
chr12:110411643(-) A-I      intronic
chr12:110411166(-) A-I      intronic
chr12:110411612(-) A-I      intronic
chr12:110379750(-) A-I      intronic
chr12:110410890(-) A-I      intronic
chr12:110410445(-) A-I      intronic
chr12:110410444(-) A-I      intronic
chr12:110379702(-) A-I      intronic
chr12:110410362(-) A-I      intronic
chr12:110380394(-) A-I      intronic
chr12:110410346(-) A-I      intronic
chr12:110410350(-) A-I      intronic
chr12:110409717(-) A-I      intronic
chr12:110409713(-) A-I      intronic
chr12:110409699(-) A-I      intronic
chr12:110409687(-) A-I      intronic
chr12:110409682(-) A-I      intronic
chr12:110417283(-) A-I      intronic
chr12:110409677(-) A-I      intronic
chr12:110398269(-) A-I      intronic
chr12:110372771(-) A-I      intronic
chr12:110409641(-) A-I      intronic
chr12:110409332(-) A-I      intronic
chr12:110409308(-) A-I      intronic
chr12:110379690(-) A-I      intronic
chr12:110408276(-) A-I      intronic
chr12:110379843(-) A-I      intronic
chr12:110408140(-) A-I      intronic
chr12:110408085(-) A-I      intronic
chr12:110407852(-) A-I      intronic
chr12:110407828(-) A-I      intronic
chr12:110407740(-) A-I      intronic
chr12:110396320(-) A-I      intronic
chr12:110406403(-) A-I      intronic
chr12:110407685(-) A-I      intronic
chr12:110407508(-) A-I      intronic
chr12:110372839(-) A-I      intronic
chr12:110407489(-) A-I      intronic
chr12:110377438(-) A-I      intronic
chr12:110373330(-) A-I      intronic
chr12:110404232(-) A-I      intronic
chr12:110377434(-) A-I      intronic
chr12:110407466(-) A-I      intronic
chr12:110381335(-) A-I      intronic
chr12:110406737(-) A-I      intronic
chr12:110379501(-) A-I      intronic
chr12:110406651(-) A-I      intronic
chr12:110373339(-) A-I      intronic
chr12:110377421(-) A-I      intronic
chr12:110377410(-) A-I      intronic
chr12:110373344(-) A-I      intronic
chr12:110377408(-) A-I      intronic
chr12:110408235(-) A-I      intronic
chr12:110373345(-) A-I      intronic
chr12:110373352(-) A-I      intronic
chr12:110409227(-) A-I      intronic
chr12:110373411(-) A-I      intronic
chr12:110378566(-) A-I      intronic
chr12:110383689(-) A-I      intronic
chr12:110379558(-) A-I      intronic
chr12:110422508(-) A-I      intronic
chr12:110373425(-) A-I      intronic
chr12:110375757(-) A-I      intronic
chr12:110373426(-) A-I      intronic
chr12:110381977(-) A-I      intronic
chr12:110381983(-) A-I      intronic
chr12:110381992(-) A-I      intronic
chr12:110423046(-) A-I      intronic
chr12:110391426(-) A-I      intronic
chr12:110392499(-) A-I      intronic
chr12:110392541(-) A-I      intronic
chr12:110409195(-) A-I      intronic
chr12:110392580(-) A-I      intronic
chr12:110409220(-) A-I      intronic
chr12:110404147(-) A-I      intronic
chr12:110392585(-) A-I      intronic
chr12:110375754(-) A-I      intronic
chr12:110392592(-) A-I      intronic
chr12:110392621(-) A-I      intronic
chr12:110392622(-) A-I      intronic
chr12:110392628(-) A-I      intronic
chr12:110409325(-) A-I      intronic
chr12:110392660(-) A-I      intronic
chr12:110412248(-) A-I      intronic
chr12:110393053(-) A-I      intronic
chr12:110393057(-) A-I      intronic
chr12:110393067(-) A-I      intronic
chr12:110375570(-) A-I      intronic
chr12:110393157(-) A-I      intronic
chr12:110393158(-) A-I      intronic
chr12:110394656(-) A-I      intronic
chr12:110409298(-) A-I      intronic
chr12:110394659(-) A-I      intronic
chr12:110394740(-) A-I      intronic
chr12:110378662(-) A-I      intronic
chr12:110425427(-) A-I      intronic
chr12:110374455(-) A-I      intronic
chr12:110394699(-) A-I      intronic
chr12:110394785(-) A-I      intronic
chr12:110408109(-) A-I      intronic
chr12:110394809(-) A-I      intronic
chr12:110395822(-) A-I      intronic
chr12:110395846(-) A-I      intronic
chr12:110415461(-) A-I      intronic
chr12:110396143(-) A-I      intronic
chr12:110396158(-) A-I      intronic
chr12:110397043(-) A-I      intronic
chr12:110397052(-) A-I      intronic
chr12:110393756(-) A-I      intronic
chr12:110409401(-) A-I      intronic
chr12:110408296(-) A-I      intronic
chr12:110397033(-) A-I      intronic
chr12:110422538(-) A-I      intronic
chr12:110406540(-) A-I      intronic
chr12:110403868(-) A-I      intronic
chr12:110415505(-) A-I      intronic
chr12:110396306(-) A-I      intronic
chr12:110411083(-) A-I      intronic
chr12:110413770(-) A-I      intronic
chr12:110422367(-) A-I      intronic
chr12:110407760(-) A-I      intronic
chr12:110407444(-) A-I      intronic
chr12:110410720(-) A-I      intronic
chr12:110413737(-) A-I      intronic
chr12:110409269(-) A-I      intronic
chr12:110408198(-) A-I      intronic
chr12:110409404(-) A-I      intronic
chr12:110415580(-) A-I      intronic
chr12:110417253(-) A-I      intronic
chr12:110379496(-) A-I      intronic
chr12:110407817(-) A-I      intronic
chr12:110396195(-) A-I      intronic
chr12:110378428(-) A-I      intronic
chr12:110378545(-) A-I      intronic
chr12:110407653(-) A-I      intronic
chr12:110415133(-) A-I      intronic
chr12:110410879(-) A-I      intronic
chr12:110407176(-) A-I      intronic
chr12:110411602(-) A-I      intronic
chr12:110378541(-) A-I      intronic
chr12:110425187(-) A-I      intronic
chr12:110411219(-) A-I      intronic
chr12:110410377(-) A-I      intronic
chr12:110423753(-) A-I      intronic
chr12:110415172(-) A-I      intronic
chr12:110410860(-) A-I      intronic
chr12:110412231(-) A-I      intronic
chr12:110422075(-) A-I      intronic
chr12:110378519(-) A-I      intronic
chr12:110404156(-) A-I      intronic
chr12:110407639(-) A-I      intronic
chr12:110379911(-) A-I      intronic
chr12:110407150(-) A-I      intronic
chr12:110422518(-) A-I      intronic
chr12:110394611(-) A-I      intronic
chr12:110411642(-) A-I      intronic
chr12:110379829(-) A-I      intronic
chr12:110378640(-) A-I      intronic
chr12:110423737(-) A-I      intronic
chr12:110391844(-) A-I      intronic
chr12:110425452(-) A-I      intronic
chr12:110407689(-) A-I      intronic
chr12:110413047(-) A-I      intronic
chr12:110379423(-) A-I      intronic
chr12:110404192(-) A-I      intronic
chr12:110425407(-) A-I      intronic
chr12:110415204(-) A-I      intronic
chr12:110424998(-) A-I      intronic
chr12:110414558(-) A-I      intronic
chr12:110422408(-) A-I      intronic
chr12:110412169(-) A-I      intronic
chr12:110394625(-) A-I      intronic
chr12:110379754(-) A-I      intronic
chr12:110415090(-) A-I      intronic
chr12:110394747(-) A-I      intronic
chr12:110378601(-) A-I      intronic
chr12:110392521(-) A-I      intronic
chr12:110378602(-) A-I      intronic
chr12:110377645(-) A-I      intronic
chr12:110421980(-) A-I      intronic
chr12:110407676(-) A-I      intronic
chr12:110378522(-) A-I      intronic
chr12:110404245(-) A-I      intronic
chr12:110398334(-) A-I      intronic
chr12:110413171(-) A-I      intronic
chr12:110409228(-) A-I      intronic
chr12:110394600(-) A-I      intronic
chr12:110392469(-) A-I      intronic
chr12:110415985(-) A-I      intronic
chr12:110422117(-) A-I      intronic
chr12:110408131(-) A-I      intronic
chr12:110407463(-) A-I      intronic
chr12:110425476(-) A-I      intronic
chr12:110413741(-) A-I      intronic
chr12:110416167(-) A-I      intronic
chr12:110410447(-) A-I      intronic
chr12:110425492(-) A-I      intronic
chr12:110394007(-) A-I      intronic
chr12:110423864(-) A-I      intronic
chr12:110416061(-) A-I      intronic
chr12:110403899(-) A-I      intronic
chr12:110409300(-) A-I      intronic
chr12:110410663(-) A-I      intronic
chr12:110411218(-) A-I      intronic
chr12:110381981(-) A-I      intronic
chr12:110408719(-) A-I      intronic
chr12:110415221(-) A-I      intronic
chr12:110415993(-) A-I      intronic
chr12:110423880(-) A-I      intronic
chr12:110413149(-) A-I      intronic
chr12:110380211(-) A-I      intronic
chr12:110379525(-) A-I      intronic
chr12:110415233(-) A-I      intronic
chr12:110408134(-) A-I      intronic
chr12:110408042(-) A-I      intronic
chr12:110422135(-) A-I      intronic
chr12:110407175(-) A-I      intronic
chr12:110426264(-) A-I      intronic
chr12:110415565(-) A-I      intronic
chr12:110422390(-) A-I      intronic
chr12:110423791(-) A-I      intronic
chr12:110413848(-) A-I      intronic
chr12:110415479(-) A-I      intronic
chr12:110405730(-) A-I      intronic
chr12:110381206(-) A-I      intronic
chr12:110404121(-) A-I      intronic
chr12:110415148(-) A-I      intronic
chr12:110416160(-) A-I      intronic
chr12:110406431(-) A-I      intronic
chr12:110425361(-) A-I      intronic
chr12:110408297(-) A-I      intronic
chr12:110391396(-) A-I      intronic
chr12:110423698(-) A-I      intronic
chr12:110416065(-) A-I      intronic
chr12:110378493(-) A-I      intronic
chr12:110411735(-) A-I      intronic
chr12:110413847(-) A-I      intronic
chr12:110415984(-) A-I      intronic
chr12:110423036(-) A-I      intronic
chr12:110422191(-) A-I      intronic
chr12:110425364(-) A-I      intronic
chr12:110398303(-) A-I      intronic
chr12:110393686(-) A-I      intronic
chr12:110411845(-) A-I      intronic
chr12:110414680(-) A-I      intronic
chr12:110422320(-) A-I      intronic
chr12:110424380(-) A-I      intronic
chr12:110394639(-) A-I      intronic
chr12:110416026(-) A-I      intronic
chr12:110408864(-) A-I      intronic
chr12:110413864(-) A-I      intronic
chr12:110409310(-) A-I      intronic
chr12:110425387(-) A-I      intronic
chr12:110416070(-) A-I      intronic
chr12:110379849(-) A-I      intronic
chr12:110415990(-) A-I      intronic
chr12:110408176(-) A-I      intronic
chr12:110408054(-) A-I      intronic
chr12:110393898(-) A-I      intronic
chr12:110392996(-) A-I      intronic
chr12:110381985(-) A-I      intronic
chr12:110420583(-) A-I      intronic
chr12:110413692(-) A-I      intronic
chr12:110380363(-) A-I      intronic
chr12:110380277(-) A-I      intronic
chr12:110409301(-) A-I      intronic
chr12:110425080(-) A-I      intronic
chr12:110403898(-) A-I      intronic
chr12:110409304(-) A-I      intronic
chr12:110411125(-) A-I      intronic
chr12:110391346(-) A-I      intronic
chr12:110391332(-) A-I      intronic
chr12:110404093(-) A-I      intronic
chr12:110378468(-) A-I      intronic
chr12:110422428(-) A-I      intronic
chr12:110395495(-) A-I      intronic
chr12:110415094(-) A-I      intronic
chr12:110391349(-) A-I      intronic
chr12:110416025(-) A-I      intronic
chr12:110422470(-) A-I      intronic
chr12:110413081(-) A-I      intronic
chr12:110411681(-) A-I      intronic
chr12:110415544(-) A-I      intronic
chr12:110413111(-) A-I      intronic
chr12:110378502(-) A-I      intronic
chr12:110425410(-) A-I      intronic
chr12:110392538(-) A-I      intronic
chr12:110404110(-) A-I      intronic
chr12:110411723(-) A-I      intronic
chr12:110425453(-) A-I      intronic
chr12:110378482(-) A-I      intronic
chr12:110408186(-) A-I      intronic
chr12:110381952(-) A-I      intronic
chr12:110422304(-) A-I      intronic
chr12:110424395(-) A-I      intronic
chr12:110404451(-) A-I      intronic
chr12:110403938(-) A-I      intronic
chr12:110415095(-) A-I      intronic
chr12:110416056(-) A-I      intronic
chr12:110409523(-) A-I      intronic
chr12:110392447(-) A-I      intronic
chr12:110413803(-) A-I      intronic
chr12:110373410(-) A-I      intronic
chr12:110391350(-) A-I      intronic
chr12:110404150(-) A-I      intronic
chr12:110409236(-) A-I      intronic
chr12:110416130(-) A-I      intronic
chr12:110403886(-) A-I      intronic
chr12:110391303(-) A-I      intronic
chr12:110410563(-) A-I      intronic
chr12:110391370(-) A-I      intronic
chr12:110380299(-) A-I      intronic
chr12:110408241(-) A-I      intronic
chr12:110397146(-) A-I      intronic
chr12:110422108(-) A-I      intronic
chr12:110380193(-) A-I      intronic
chr12:110425545(-) A-I      intronic
chr12:110410359(-) A-I      intronic
chr12:110409165(-) A-I      intronic
chr12:110372678(-) A-I      intronic
chr12:110379673(-) A-I      intronic
chr12:110409632(-) A-I      intronic
chr12:110413674(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED GIT2
chr12:110391303(-) A-I intron -    15342557
chr12:110391346(-) A-I intron -    15342557
chr12:110391349(-) A-I intron -    15342557
chr12:110391350(-) A-I intron -    15342557
chr12:110391396(-) A-I intron -    15342557
chr12:110378541(-) A-I intron -    22327324
chr12:110378547(-) A-I intron -    22327324
chr12:110378601(-) A-I intron -    22327324
chr12:110378643(-) A-I intron -    22327324
chr12:110381925(-) A-I intron -    22327324
chr12:110381952(-) A-I intron -    22327324
chr12:110391350(-) A-G intron -    22484847
chr12:110403899(-) A-G intron -    22484847
chr12:110404121(-) A-G intron -    22484847
chr12:110404147(-) A-G intron -    22484847
chr12:110408054(-) A-G intron -    22484847
chr12:110408131(-) A-G intron -    22484847
chr12:110410663(-) A-G intron -    22484847
chr12:110413737(-) A-G intron -    22484847
chr12:110413741(-) A-G intron -    22484847
chr12:110413770(-) A-G intron -    22484847
chr12:110416025(-) A-G intron -    22484847
chr12:110392521(-) A-G intron -    22484847
chr12:110392538(-) A-G intron -    22484847
chr12:110394600(-) A-G intron -    22484847
chr12:110394639(-) A-G intron -    22484847
chr12:110394740(-) A-G intron -    22484847
chr12:110394747(-) A-G intron -    22484847
chr12:110395495(-) A-G intron -    22484847
chr12:110396306(-) A-G intron -    22484847
chr12:110398269(-) A-G intron -    22484847
chr12:110398334(-) A-G intron -    22484847
chr12:110403868(-) A-G intron -    22484847
chr12:110403886(-) A-G intron -    22484847
chr12:110403938(-) A-G intron -    22484847
chr12:110404245(-) A-G intron -    22484847
chr12:110407760(-) A-G intron -    22484847
chr12:110408109(-) A-G intron -    22484847
chr12:110408186(-) A-G intron -    22484847
chr12:110408198(-) A-G intron -    22484847
chr12:110408297(-) A-G intron -    22484847
chr12:110409269(-) A-G intron -    22484847
chr12:110409300(-) A-G intron -    22484847
chr12:110409301(-) A-G intron -    22484847
chr12:110409310(-) A-G intron -    22484847
chr12:110409632(-) A-G intron -    22484847
chr12:110410377(-) A-G intron -    22484847
chr12:110410720(-) A-G intron -    22484847
chr12:110411083(-) A-G intron -    22484847
chr12:110411218(-) A-G intron -    22484847
chr12:110411219(-) A-G intron -    22484847
chr12:110413171(-) A-G intron -    22484847
chr12:110413848(-) A-G intron -    22484847
chr12:110414486(-) A-G intron -    22484847
chr12:110415094(-) A-G intron -    22484847
chr12:110415095(-) A-G intron -    22484847
chr12:110416160(-) A-G intron -    22484847
chr12:110421980(-) A-G intron -    22484847
chr12:110422108(-) A-G intron -    22484847
chr12:110422117(-) A-G intron -    22484847
chr12:110422135(-) A-G intron -    22484847
chr12:110422371(-) G-A intron -    22484847
chr12:110422390(-) A-G intron -    22484847
chr12:110422470(-) A-G intron -    22484847
chr12:110422538(-) A-G intron -    22484847
chr12:110424395(-) A-G intron -    22484847
chr12:110424998(-) A-G intron -    22484847
chr12:110425080(-) A-G intron -    22484847
chr12:110425187(-) A-G intron -    22484847
chr12:110425364(-) A-G intron -    22484847
chr12:110425407(-) A-G intron -    22484847
chr12:110425452(-) A-G intron -    22484847
chr12:110425453(-) A-G intron -    22484847
chr12:110425476(-) A-G intron -    22484847
chr12:110425492(-) A-G intron -    22484847
chr12:110425545(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase GIT2
chr12:110367768-110367769(-) m6A 3'UTR       27773535
chr12:110367886-110367887(-) m6A 3'UTR       24981863//27773535//22608085
chr12:110367898-110367899(-) m6A 3'UTR       24981863//27773535//22608085
chr12:110367978-110367979(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828//22575960//22608085
chr12:110368003-110368004(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828//22575960//22608085
chr12:110368079-110368080(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr12:110368089-110368090(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr12:110368105-110368106(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr12:110368268-110368269(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085
chr12:110368409-110368410(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085
chr12:110368416-110368417(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085
chr12:110368482-110368483(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085
chr12:110368490-110368491(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085
chr12:110368538-110368539(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr12:110368642-110368643(-) m6A 3'UTR       24284625//24209618
chr12:110368802-110368803(-) m6A 3'UTR       24284625//24981863//27773535
chr12:110368956-110368957(-) m6A 3'UTR       24981863
chr12:110369776-110369777(-) m6A 3'UTR       24981863
chr12:110369905-110369906(-) m6A 3'UTR       24981863
chr12:110369944-110369945(-) m6A 3'UTR       27773535
chr12:110369982-110369983(-) m6A 3'UTR       27773535
chr12:110369996-110369997(-) m6A 3'UTR       27773535
chr12:110370082-110370083(-) m6A 3'UTR       27773535
chr12:110370419-110370420(-) m6A 3'UTR       27773535
chr12:110370443-110370444(-) m6A 3'UTR       27773535
chr12:110370463-110370464(-) m6A 3'UTR       27773535
chr12:110370481-110370482(-) m6A 3'UTR       27773535
chr12:110370653-110370654(-) m6A 3'UTR       24284625//24981863//26404942//27773535//22608085
chr12:110370668-110370669(-) m6A 3'UTR       24284625//24981863//26404942//27773535//22608085
chr12:110370688-110370689(-) m6A 3'UTR       24284625//24981863//26404942//27773535//22608085
chr12:110370713-110370714(-) m6A 3'UTR       24284625//24981863//26404942//27773535//22608085
chr12:110370792-110370793(-) m6A CDS       24284625//24981863//27773535//22608085
chr12:110370900-110370901(-) m6A CDS//exon       24284625//24981863//27773535
chr12:110370913-110370914(-) m6A CDS//exon       24284625//27773535
chr12:110370970-110370971(-) m6A CDS//exon       27773535
chr12:110370992-110370993(-) m6A CDS//exon       27773535
chr12:110376192-110376193(-) m6A CDS//exon       24981863//27773535
chr12:110376229-110376230(-) m6A CDS//exon       24981863//27773535
chr12:110376243-110376244(-) m6A CDS//exon       24981863//27773535
chr12:110376248-110376249(-) m6A CDS//exon       24981863//27773535
chr12:110376303-110376304(-) m6A CDS//exon       24981863//27773535
chr12:110376313-110376314(-) m6A CDS//exon       24981863//27773535
chr12:110385220-110385221(-) m6A 3'UTR//CDS//exon//intron       27773535
chr12:110385239-110385240(-) m6A 3'UTR//CDS//exon//intron       27773535
chr12:110385270-110385271(-) m6A 3'UTR//CDS//exon//intron       27773535
chr12:110385280-110385281(-) m6A 3'UTR//CDS//exon//intron       27773535
chr12:110385302-110385303(-) m6A 3'UTR//CDS//exon//intron       27773535
chr12:110385321-110385322(-) m6A 3'UTR//exon//intron       27773535
chr12:110385339-110385340(-) m6A 3'UTR//exon//intron       27773535
chr12:110386359-110386360(-) m6A 3'UTR//exon//intron       24284625//24981863//28052920//27773535//27371828//22608085
chr12:110386421-110386422(-) m6A 3'UTR//exon//intron       24284625//24981863//27773535//27371828//22608085
chr12:110386429-110386430(-) m6A 3'UTR//exon//intron       24284625//24981863//27773535//27371828//22608085
chr12:110386484-110386485(-) m6A 3'UTR//exon//intron       24284625//24981863//27773535//27371828//22608085
chr12:110386490-110386491(-) m6A 3'UTR//exon//intron       24284625//24981863//27773535//27371828//22608085
chr12:110386504-110386505(-) m6A 3'UTR//exon//intron       24981863//27773535//27371828//22608085
chr12:110389094-110389095(-) m6A CDS//exon//intron       27773535//27371828
chr12:110390356-110390357(-) m6A intron       27773535//27371828
chr12:110390910-110390911(-) m6A CDS//exon       24981863//27773535
chr12:110390925-110390926(-) m6A CDS//exon       24981863//27773535
chr12:110390939-110390940(-) m6A CDS//exon       24981863//27773535
chr12:110390981-110390982(-) m6A CDS//exon       24981863//27773535
chr12:110391015-110391016(-) m6A CDS//exon       24981863//27773535
chr12:110391038-110391039(-) m6A CDS//exon       24981863//27773535
chr12:110391119-110391120(-) m6A exon//intron       27773535
chr12:110405294-110405295(-) m6A CDS//exon       24981863
chr12:110418760-110418761(-) m6A CDS//exon       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-92b-3p
Cytoplasm Breast adenocarcinoma cells (MCF-7)|Cervical adenocarcinoma cells (HeLa)     24918059
Exosome Peripheral blood     31746410
Exosome Plasma     23663360
Exosome Human mast cell line (HMC-1)     24009880
Exosome Cerebrospinal fluid     25420022
Exosome Blood|B lymphoblastoid cells|Breast tissue|Endothelial cells|Kidney tissue|Lymphoma tissue|Mast cells|Tongue tissue     -
Extracellular vesicle HEK-293T cells     22849433
Microvesicle Seminal plasma     23539611
Microvesicle Blood|Colon cancer cell line (LIM1863)|Fibroblasts|Mesenchymal stem cells     -
Mitochondrion Skeletal muscle myoblasts     21637849
Mitochondrion Cell line (HEK-293|HeLa)     22984580
Nucleus Breast adenocarcinoma cells (MCF-7)|Cervical adenocarcinoma cells (HeLa)     24918059
GIT2
Chromatin K562 cells     -
Cytosol K562 cells     -
Exosome Blood     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Related Drug Information:


Resource Symbol Drug Name PubChem
ID
Function
ncDR hsa-miR-92b-3p
Iodine Green 9956454 Drug sensitive
Sensorad 99342 Drug sensitive
8-Aminoadenosine 96851 Drug resistant
Gardenin B 96539 Drug sensitive
Hydrazinecarboximidamide, 2,2'-(carbonylbis(imino-3,1-phenyleneethylidyne))bis-, hydrochloride 9577144 Drug sensitive
Actinomycin X4357G methoxime 9573583 Drug sensitive
(3Z,8S,11Z,16S)-8,16-Bis(2-oxopropyl)-1,9-dioxacyclohexadeca-3,11-diene-2,5,10,13-tetrone 92973777 Drug sensitive
L-2-Aminobutyric acid 80283 Drug sensitive
Vancide 26 79411 Drug sensitive
Cinerubin B 73593 Drug sensitive
4-(2-Naphthylamino)phenol 7141 Drug sensitive
Sulbentine 67686 Drug sensitive
Ixabepilone 6445540 Drug sensitive
Piriqualone 6015423 Drug sensitive
trans-1,2-Bis(propylsulfonyl)ethylene 5904452 Drug sensitive
1,1'-Diethyl-2,2'-cyanine chloride 5717105 Drug sensitive
Artelasticin 5471311 Drug sensitive
2-(1,3-Benzodioxol-5-yl)-5-hydroxy-3,7-dimethoxy-4H-chromen-4-one 5466137 Drug sensitive
6-(4-Ethylphenyl)-2-benzenesulfonamidepyridazine-3(2H)-one 54612980 Drug sensitive
Herveline O 5459269 Drug sensitive
Cuspidatin C 5459164 Drug sensitive
Thiram 5455 Drug sensitive
(1E,4E)-1,5-Dipyridin-3-ylpenta-1,4-dien-3-one 5382674 Drug sensitive
Indanthren Corinth RK 5351878 Drug sensitive
5-Phenyl-N-(3,4,5-trimethoxyphenyl)-1,3-oxazol-2-amine 5329854 Drug sensitive
1-[3-(Propylamino)phenyl]-N-(pyridin-4-ylmethylideneamino)pyrazolo[3,4-d]pyrimidin-4-amine 53239979 Drug sensitive
Vorinostat 5311 Drug sensitive
Spiperone 5265 Drug resistant
Kekule 499328 Drug sensitive
10-Hydroxy-1,2,6a,6b,9,9,12a-heptamethyl-2,3,4,5,6,6a,7,8,8a,10,11,12-dodecahydro-1H-picene-4a-carboxylic acid 495604 Drug sensitive
6-Methoxy-7-(2lambda(5)-1,2-triazadienyl)-5,8-quinolinedione 494043 Drug sensitive
Methyl (13S,15S,16R,18S)-13-[(10S,11R,12R,19R)-11-acetyloxy-12-ethyl-10-hydroxy-5-methoxy-10-methoxycarbonyl-8-methyl-8,16-diazapentacyclo[10.6.1.01,9.02,7.016,19]nonadeca-2,4,6,13-tetraen-4-yl]-18-ethyl-1-oxido-17-oxa-11-aza-1-azoniapentacyclo[13.4.1.04,12.05,10.016,18]icosa-4(12),5,7,9-tetraene-13-carboxylate 462173 Drug sensitive
BAS100 Monohydrate 45028404 Drug sensitive
1-(4-(Benzyloxy)phenyl)-3-(3-(1-ethyl-4-(1H-pyrrolo[2,3-b]pyridin-4-yl)-1H-pyrazol-3-yl)phenyl)urea 44587530 Drug sensitive
Isopinnatal 44558939 Drug sensitive
1-Benzyl-3-hexadecyl-2-methylimidazolium chloride 44219704 Drug sensitive
2,6-Epoxy-2H-1-benzoxocin-5(6H)-one, 6,8-dimethyl- 434882 Drug sensitive
Di-n-octyl-secalonsaure A 430141 Drug sensitive
2-Amino-4-(2-hydroxy-4-methylphenyl)-5-phenylpyrimidine 392744 Drug sensitive
beta-Lapachone 3885 Drug sensitive
Acetic acid,4,7,10-tetraazacyclododecane-1,7-diyl]bis 387352 Drug sensitive
L-LYS-L-p-NO2Phe-L-Ala-L-p-NO2PheNH2 386384 Drug sensitive
4-Phenacyloxychromen-2-one 386272 Drug resistant
2-Ethylaminoestradiol 384235 Drug sensitive
(-)7,8-Dihydrocalanolide A 383107 Drug sensitive
2-Acetyl-1,2-dihydroellipticine 376328 Drug resistant
4-Methylthio-N-(3,4,5-trimethoxybenzyl)aniline 373808 Drug sensitive
Sanguilutine pseudobase 371258 Drug sensitive
1-(4-Methoxy-2-methylphenyl)naphtho[1,2-c]furan-3(1H)-one 369148 Drug sensitive
1-Chloro-3-(3-chloropropylsulfonylsulfanyl)propane 355643 Drug sensitive
Maxima isoflavone D 343081 Drug sensitive
Bis(helenalinyl)glutarate 336831 Drug sensitive
Rustaiyan A 324967 Drug sensitive
(15S)-15-Ethyl-1,11-diazapentacyclo[9.6.2.02,7.08,18.015,19]nonadeca-2,4,6,8(18)-tetraen-17-one 2724040 Drug sensitive
Antineoplastic-92915 261051 Drug sensitive
5-Hydroxy-3-phenylpyrano[3,2-c]chromen-2(5H)-one 24205741 Drug sensitive
(2-Methoxy-9,10-dihydrophenanthren-3-yl)methyl-dimethyl-(phenylsulfanylmethyl)azanium;bromide 24200489 Drug sensitive
Prumycin HCl 24197905 Drug resistant
9H-Purine, 2-amino-6-(o-chlorobenzylthio)-9-propyl- 239486 Drug sensitive
4,5-Bis(4-methoxyphenyl)-1,5-dihydroimidazol-2-one 231112 Drug sensitive
3-Amino-N-(2-fluorophenyl)-5-oxo-5,6,7,8-tetrahydrothieno[2,3-b]quinoline-2-carboxamide 1856915 Drug sensitive
Sudan II 18386 Drug sensitive
(2R)-2-[(3S,6R)-6-[[(2S,4R,5R,6R,7R,9R)-2-[(5S)-5-[(3S)-5-[(2S,3S,5R,6R)-6-Hydroxy-6-(hydroxymethyl)-3,5-dimethyloxan-2-yl]-3-methyloxolan-2-yl]-5-methyloxolan-2-yl]-7-methoxy-2,4,6-trimethyl-1,10-dioxaspiro[4.5]decan-9-yl]methyl]-3-methyloxan-2-yl]propanoic acid 152743331 Drug sensitive
Arsenic trioxide 14888 Drug sensitive
Astrazon Orange R 135747272 Drug sensitive
C8, Carbonyl prodigiosine 135540857 Drug sensitive
(2S,4S,5R)-20-De(1-hydroxypropyl)-6-demethyl-2,6-diethyl-5-hydroxy-20-(1-hydroxybutyl)lysocellin 124081057 Drug sensitive
Melampodinin 11953936 Drug sensitive
2,2'-Bioxirane 11254 Drug sensitive
Perillyl alcohol 10819 Drug sensitive
Cladospirone bisepoxide 10316810 Drug sensitive
Chimaphilin 101211 Drug sensitive
6-phenyl-6h-indeno[1,2-c]isoquinoline-5,11-dione - Drug resistant
1-[(2-cyclohexymethoxy)methyl]-5-ethyl-6-iodouracil - Drug resistant
tgf.alpha.-pe40 - Drug resistant
tp4ek - Drug resistant
tunicamycin - Drug resistant
(z) 3,3',4,5-tetramethoxystilbene - Drug sensitive
(z) 4-acetoxy-(3,4',5)-trimethoxystilbene - Drug sensitive
(Z)-N-phenyl-3-(3,4,5-trimethoxystyryl)pyridin-2-amine - Drug sensitive
1h-benzimidazole, 5,5'-dithiobis[2-(trifluoromethyl)- (9ci) - Drug sensitive
2-(4-(methylsulfonyl)phenyl)-6-p-tolyl-4,5-dihydropyridazin-3(2H)-one - Drug sensitive
2,4-diethoxyestra-1,3,5(10)trien-3,17.beta.-diol - Drug sensitive
2-[(3,4-dicloro)anilino]-3-phenyl-5,7-diamino quinoxaline - Drug sensitive
4-[4-(3-Methoxy-phenyl)-piperazin-1 -yl]-5H-pyrrolo[3,2-d]pyrimidine - Drug sensitive
4-morpholinecarbodithioic acid, antimony complex - Drug sensitive
4-thiomorpholinecarbodithioic acid, antimony complex - Drug sensitive
5-[2-(4-methoxyphenyl)ethyl]-1,2,3-dimethoxy benzene - Drug sensitive
7-n,n-dimethylamino brefeldin a hydrochloride - Drug sensitive
9-acridinamine, n-(4-ethoxyphenyl)-, monohydrochloride - Drug sensitive
anthracen-9-one, 10-[(2-methoxyphenyl)methylene]- - Drug sensitive
benzamide, 5-bromo-2-hydroxy-n-[3-(trifluoromethyl)phenyl]- - Drug sensitive
benzo[1,2-c:4,5-c']dipyrrole-1,3,5,7(2h,6h)-tetraimine - Drug sensitive
E)-1-(4-(quinazolin-4-ylamino)phenyl)-3-(2,4,6-trimethoxyphenyl)prop-2-en-1-one - Drug sensitive
inosine, 6-thio-, 2',3',5'-tris(4-methoxybenzoate) - Drug sensitive
isoflavone, 5,7-dihydroxy-4'-nitro- - Drug sensitive
phosphonium, (3-bromopropyl)triphenyl- bromide - Drug sensitive
(Z)-3-((2-(4-(trifluoromethyl)phenyl)-3H-benzo[d]imidazol-5-yl)methylene)indolin-2-one - Drug sensitive
(Z)-6-chloro-3-((2-(4-methoxyphenyl)-3H-benzo[d]imidazol-5-yl)methylene)indolin-2-one - Drug sensitive
1-[(2-phenylethoxy)methyl]-5-ethyl-6-(phenylseleno)uracil - Drug sensitive
2-amino-5-chloro-6-(2-thiazolyloxy)-benzimidazole - Drug sensitive
4-carbo-1-thiazolidine-3-o-gluconyl-.gamma.-lactone - Drug sensitive
9-(3-fluorobenzyl)-7-(3-fluorobenzyloxy)-2-(4-fluorobenzyl)-1-methyl-9H-beta-carbolinium bromide - Drug sensitive
antineoplastic-615538 - Drug sensitive
antineoplastic-d665837 - Drug sensitive
arylmethylene-f - Drug sensitive
carzinostatin - Drug sensitive
cyclo [n-naphthoyl-d-lys-asn-gln-trp-ala-val-d-ala-his-leu] - Drug sensitive
geldanamycin-11-hexadecanic acid ester - Drug sensitive
his 47-methyl ct - Drug sensitive
n-myristoyl-(s)-phenylalaninal diethylcetal - Drug sensitive
Resource Symbol Drug Name PubChem
ID
Function Link  
RNAInter hsa-miR-92b-3p
(S)-N-[1-(3-Morpholin-4-yl-phenyl)-ethyl]-3-phenyl-acrylamide 9949648 Drug interaction    RC00005944
Gemcitabine 60750 Drug interaction    RC00005940
Vincristine 5978 Drug interaction    RC00005938
Eloxatine 5310940 Drug interaction    RC00005943
Diethylstilbestrol 448537 Drug interaction    RC00005942
Bortezomib 387447 Drug interaction    RC00005941
5-Fluorouracil 3385 Drug interaction    RC00005937
Doxorubicin 31703 Drug interaction    RC00005939
cis-Diaminedichloroplatinum 2767 Drug interaction    RC00005936
Trastuzumab - Drug interaction    RC00005945
Resource Symbol Drug Name PubChem ID PMID
NoncoRNA hsa-miR-92b-3p
Methyl (9R,10S,11S,12R,19R)-11-acetyloxy-12-ethyl-4-[(13S,15R,17S)-17-ethyl-17-hydroxy-13-methoxycarbonyl-1,11-diazatetracyclo[13.3.1.04,12.05,10]nonadeca-4(12),5,7,9-tetraen-13-yl]-8-formyl-10-hydroxy-5-methoxy-8,16-diazapentacyclo[10.6.1.01,9.02,7.016,19]nonadeca-2,4,6,13-tetraene-10-carboxylate 134755071       26617885

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-92b-3p
Interactor2: GIT2

Evidence Support:


Weak-Evidence HITS-CLIP//PAR-CLIP
Support Database ViRBase

References:


PMID 22473208 Target region 3'UTR
Source ViRBase Interactor1 expression None
Tissue or cell line Jijoye cells Interactor2 expression None
Description Our HITS-CLIP data yield 1185 human 3'UTRs targeted by members of the miR-17~92 cluster in Jijoye cells. Comparison to the 1664 3'UTRs targeted by EBV miRNAs reveals 740 shared genes (44% of EBV targets and 62% of miR-17~92 targets; Figure 6B and Supplementary Table 7). Thus, EBV miRNAs co-target a majority of miR-17~92 regulated mRNAs, which are assigned to a variety of pathways, most notably regulating transcription, apoptosis, and the cell cycle (Figure 6C). Similarly, other abundant immunologically relevant miRNAs, 142-3p and miR-155, co-target with EBV miRNAs a large fraction of their Ago-bound 3'UTRs, representing ~60% of the targets for each of these host miRNAs (Supplementary Figure 5).

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