Basic Information:

  VIRBase ID:  

HHID00060022

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-513a-5p:  MIMAT0002877          NUP153:  NM_001278210     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsa-miR-513a-5p	NUP153
miRBase Accession/Entrez ID	MIMAT0002877	9972
Organism	Homo sapiens	Homo sapiens
Category	miRNA	mRNA
Alias	-	HNUP153//N153

ncRNA SNP information:

Resource	Symbol	SNP ID	SNP Position	Ref/Alt
miRNASNP-v3	hsa-miR-513a-5p	rs1461798164 chrX:147213539    T/C rs1557097540 chrX:147213545    C/T rs35027589 chrX:147213546    T/TC rs782289697 chrX:147213540    G/A rs782304882 chrX:147213541    A/T rs1557100166 chrX:147225905    A/G rs369895206 chrX:147225903    A/G rs782552773 chrX:147225907    C/T rs782795793 chrX:147225902    G/C rs782205541 chrX:147213552    T/A rs782591440 chrX:147213549    C/T rs1557100170 chrX:147225915    G/T rs782577003 chrX:147225910    C/T rs782669807 chrX:147225916    A/AAAGG

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	NUP153	chr6:17640921(-) A-I      intronic chr6:17636560(-) A-I      intronic chr6:17636458(-) A-I      intronic chr6:17636454(-) A-I      intronic chr6:17636444(-) A-I      intronic chr6:17636417(-) A-I      intronic chr6:17636408(-) A-I      intronic chr6:17636393(-) A-I      intronic chr6:17635840(-) A-I      intronic chr6:17635828(-) A-I      intronic chr6:17635827(-) A-I      intronic chr6:17635806(-) A-I      intronic chr6:17635765(-) A-I      intronic chr6:17634779(-) A-I      intronic chr6:17623355(-) A-I      intronic chr6:17623352(-) A-I      intronic chr6:17623347(-) A-I      intronic chr6:17623233(-) A-I      intronic chr6:17623205(-) A-I      intronic chr6:17623180(-) A-I      intronic chr6:17622682(-) A-I      intronic chr6:17622498(-) A-I      intronic chr6:17622446(-) A-I      intronic chr6:17622422(-) A-I      intronic chr6:17689949(-) A-I      intronic chr6:17689950(-) A-I      intronic chr6:17643537(-) A-I      intronic chr6:17643459(-) A-I      intronic chr6:17641850(-) A-I      intronic chr6:17641130(-) A-I      intronic chr6:17641127(-) A-I      intronic chr6:17641016(-) A-I      intronic chr6:17641008(-) A-I      intronic chr6:17641006(-) A-I      intronic chr6:17643640(-) A-I      intronic chr6:17651439(-) A-I      intronic chr6:17653440(-) A-I      intronic chr6:17653443(-) A-I      intronic chr6:17655967(-) A-I      intronic chr6:17666152(-) A-I      intronic chr6:17620243(-) A-I      intronic chr6:17620242(-) A-I      intronic chr6:17666133(-) A-I      intronic chr6:17619048(-) A-I      intronic chr6:17619002(-) A-I      intronic chr6:17618961(-) A-I      intronic chr6:17618929(-) A-I      intronic chr6:17618849(-) A-I      intronic chr6:17617976(-) A-I      intronic chr6:17617908(-) A-I      intronic chr6:17617871(-) A-I      intronic chr6:17617187(-) A-I      intronic chr6:17617159(-) A-I      intronic chr6:17617152(-) A-I      intronic chr6:17617147(-) A-I      intronic chr6:17617083(-) A-I      intronic chr6:17617078(-) A-I      intronic chr6:17617066(-) A-I      intronic chr6:17617053(-) A-I      intronic chr6:17617048(-) A-I      intronic chr6:17666127(-) A-I      intronic chr6:17661441(-) A-I      intronic chr6:17652255(-) A-I      intronic chr6:17652259(-) A-I      intronic chr6:17652267(-) A-I      intronic chr6:17654685(-) A-I      intronic chr6:17654720(-) A-I      intronic chr6:17654754(-) A-I      intronic chr6:17655796(-) A-I      intronic chr6:17655852(-) A-I      intronic chr6:17655853(-) A-I      intronic chr6:17655855(-) A-I      intronic chr6:17655879(-) A-I      intronic chr6:17655903(-) A-I      intronic chr6:17656232(-) A-I      intronic chr6:17656244(-) A-I      intronic chr6:17656268(-) A-I      intronic chr6:17656273(-) A-I      intronic chr6:17656336(-) A-I      intronic chr6:17656359(-) A-I      intronic chr6:17656390(-) A-I      intronic chr6:17656738(-) A-I      intronic chr6:17657676(-) A-I      intronic chr6:17657683(-) A-I      intronic chr6:17657726(-) A-I      intronic chr6:17658413(-) A-I      intronic chr6:17658445(-) A-I      intronic chr6:17658490(-) A-I      intronic chr6:17658515(-) A-I      intronic chr6:17658565(-) A-I      intronic chr6:17658570(-) A-I      intronic chr6:17661433(-) A-I      intronic chr6:17661410(-) A-I      intronic chr6:17657708(-) A-I      intronic chr6:17656292(-) A-I      intronic chr6:17655790(-) A-I      intronic chr6:17655757(-) A-I      intronic chr6:17651508(-) A-I      intronic chr6:17651488(-) A-I      intronic chr6:17651484(-) A-I      intronic chr6:17651452(-) A-I      intronic chr6:17651447(-) A-I      intronic chr6:17651422(-) A-I      intronic chr6:17645633(-) A-I      intronic chr6:17636339(-) A-I      intronic chr6:17636320(-) A-I      intronic chr6:17658436(-) A-I      intronic chr6:17658514(-) A-I      intronic chr6:17658619(-) A-I      intronic chr6:17658623(-) A-I      intronic chr6:17671269(-) A-I      intronic chr6:17659850(-) A-I      intronic chr6:17692181(-) A-I      intronic chr6:17659715(-) A-I      intronic chr6:17694812(-) A-I      intronic chr6:17694831(-) A-I      intronic chr6:17694866(-) A-I      intronic chr6:17699864(-) A-I      intronic chr6:17617153(-) A-I      intronic chr6:17666616(-) A-I      intronic chr6:17645807(-) A-I      intronic chr6:17647260(-) A-I      intronic chr6:17647108(-) A-I      intronic chr6:17647095(-) A-I      intronic chr6:17647056(-) A-I      intronic chr6:17645806(-) A-I      intronic chr6:17645205(-) A-I      intronic chr6:17645179(-) A-I      intronic chr6:17644929(-) A-I      intronic chr6:17643651(-) A-I      intronic chr6:17643591(-) A-I      intronic chr6:17659734(-) A-I      intronic chr6:17659880(-) A-I      intronic chr6:17659881(-) A-I      intronic chr6:17659897(-) A-I      intronic chr6:17659952(-) A-I      intronic chr6:17659953(-) A-I      intronic chr6:17659969(-) A-I      intronic chr6:17659974(-) A-I      intronic chr6:17659975(-) A-I      intronic chr6:17661405(-) A-I      intronic chr6:17661482(-) A-I      intronic chr6:17665092(-) A-I      intronic chr6:17665135(-) A-I      intronic chr6:17665245(-) A-I      intronic chr6:17666530(-) A-I      intronic chr6:17666531(-) A-I      intronic chr6:17666624(-) A-I      intronic chr6:17668403(-) A-I      intronic chr6:17668444(-) A-I      intronic chr6:17668506(-) A-I      intronic chr6:17668528(-) A-I      intronic chr6:17668894(-) A-I      intronic chr6:17668961(-) A-I      intronic chr6:17620253(-) A-I      intronic chr6:17671292(-) A-I      intronic chr6:17674977(-) A-I      intronic chr6:17682204(-) A-I      intronic chr6:17686296(-) A-I      intronic chr6:17686335(-) A-I      intronic chr6:17686723(-) A-I      intronic chr6:17686727(-) A-I      intronic chr6:17686738(-) A-I      intronic chr6:17686787(-) A-I      intronic chr6:17686803(-) A-I      intronic chr6:17686804(-) A-I      intronic chr6:17686807(-) A-I      intronic chr6:17686893(-) A-I      intronic chr6:17689896(-) A-I      intronic chr6:17689935(-) A-I      intronic chr6:17656287(-) A-I      intronic chr6:17668422(-) A-I      intronic chr6:17622424(-) A-I      intronic chr6:17636544(-) A-I      intronic chr6:17618935(-) A-I      intronic chr6:17643575(-) A-I      intronic chr6:17661543(-) A-I      intronic chr6:17661445(-) A-I      intronic chr6:17659806(-) A-I      intronic chr6:17668952(-) A-I      intronic chr6:17672127(-) A-I      intronic chr6:17636558(-) A-I      intronic chr6:17622509(-) A-I      intronic chr6:17645104(-) A-I      intronic chr6:17668908(-) A-I      intronic chr6:17668998(-) A-I      intronic chr6:17671235(-) A-I      intronic chr6:17659832(-) A-I      intronic chr6:17658540(-) A-I      intronic chr6:17692693(-) A-I      intronic chr6:17658374(-) A-I      intronic chr6:17636552(-) A-I      intronic chr6:17674918(-) A-I      intronic chr6:17669412(-) A-I      intronic chr6:17654780(-) A-I      intronic chr6:17657608(-) A-I      intronic chr6:17651282(-) A-I      intronic chr6:17656354(-) A-I      intronic chr6:17645639(-) A-I      intronic chr6:17641986(-) A-I      intronic chr6:17656350(-) A-I      intronic chr6:17667747(-) A-I      intronic chr6:17651413(-) A-I      intronic chr6:17657695(-) A-I      intronic chr6:17654771(-) A-I      intronic chr6:17622588(-) A-I      intronic chr6:17668957(-) A-I      intronic chr6:17697039(-) A-I      intronic chr6:17658470(-) A-I      intronic chr6:17653362(-) A-I      intronic chr6:17645603(-) A-I      intronic chr6:17665221(-) A-I      intronic chr6:17618969(-) A-I      intronic chr6:17655965(-) A-I      intronic chr6:17655862(-) A-I      intronic chr6:17640916(-) A-I      intronic chr6:17657516(-) A-I      intronic chr6:17618977(-) A-I      intronic chr6:17689905(-) A-I      intronic chr6:17661289(-) A-I      intronic chr6:17654664(-) A-I      intronic chr6:17617823(-) A-I      intronic chr6:17656311(-) A-I      intronic chr6:17659855(-) A-I      intronic chr6:17663718(-) A-I      intronic chr6:17671993(-) A-I      intronic chr6:17617127(-) A-I      intronic chr6:17666330(-) A-I      intronic chr6:17663632(-) A-I      intronic chr6:17653165(-) A-I      intronic chr6:17636457(-) A-I      intronic chr6:17617123(-) A-I      intronic chr6:17655867(-) A-I      intronic chr6:17655793(-) A-I      intronic chr6:17678037(-) A-I      intronic chr6:17635923(-) A-I      intronic chr6:17622430(-) A-I      intronic chr6:17654701(-) A-I      intronic chr6:17618042(-) A-I      intronic chr6:17705063(-) A-I      intronic chr6:17655822(-) A-I      intronic chr6:17667759(-) A-I      intronic chr6:17647111(-) A-I      intronic chr6:17661365(-) A-I      intronic chr6:17655941(-) A-I      intronic chr6:17635505(-) A-I      intronic chr6:17659812(-) A-I      intronic chr6:17694065(-) A-I      intronic chr6:17618026(-) A-I      intronic chr6:17692669(-) A-I      intronic chr6:17647084(-) A-I      intronic chr6:17617151(-) A-I      intronic chr6:17656270(-) A-I      intronic chr6:17668965(-) A-I      intronic chr6:17635810(-) A-I      intronic chr6:17654629(-) A-I      intronic chr6:17645663(-) A-I      intronic chr6:17619000(-) A-I      intronic chr6:17668530(-) A-I      intronic chr6:17617902(-) A-I      intronic chr6:17701943(-) A-I      intronic chr6:17657779(-) A-I      intronic chr6:17654732(-) A-I      intronic chr6:17654823(-) A-I      intronic chr6:17668584(-) A-I      intronic chr6:17618070(-) A-I      intronic chr6:17658456(-) A-I      intronic chr6:17653138(-) A-I      intronic chr6:17705155(-) A-I      intronic chr6:17635479(-) A-I      intronic chr6:17617954(-) A-I      intronic chr6:17651407(-) A-I      intronic chr6:17658527(-) A-I      intronic chr6:17635749(-) A-I      intronic chr6:17661302(-) A-I      intronic chr6:17622636(-) A-I      intronic chr6:17668962(-) A-I      intronic chr6:17666083(-) A-I      intronic chr6:17641058(-) A-I      intronic chr6:17661488(-) A-I      intronic chr6:17658505(-) A-I      intronic chr6:17656314(-) A-I      intronic chr6:17689587(-) A-I      intronic chr6:17653375(-) A-I      intronic chr6:17645729(-) A-I      intronic chr6:17617964(-) A-I      intronic chr6:17668857(-) A-I      intronic chr6:17653272(-) A-I      intronic chr6:17617848(-) A-I      intronic chr6:17661341(-) A-I      intronic chr6:17640976(-) A-I      intronic chr6:17623172(-) A-I      intronic chr6:17635925(-) A-I      intronic chr6:17655888(-) A-I      intronic chr6:17640964(-) A-I      intronic chr6:17657713(-) A-I      intronic chr6:17672131(-) A-I      intronic chr6:17663659(-) A-I      intronic chr6:17666662(-) A-I      intronic chr6:17656826(-) A-I      intronic chr6:17634771(-) A-I      intronic chr6:17659800(-) A-I      intronic chr6:17666080(-) A-I      intronic chr6:17658448(-) A-I      intronic chr6:17641052(-) A-I      intronic chr6:17666084(-) A-I      intronic chr6:17657787(-) A-I      intronic chr6:17641513(-) A-I      intronic chr6:17661436(-) A-I      intronic chr6:17636308(-) A-I      intronic chr6:17658480(-) A-I      intronic chr6:17623278(-) A-I      intronic chr6:17656256(-) A-I      intronic chr6:17686303(-) A-I      intronic chr6:17661459(-) A-I      intronic chr6:17654731(-) A-I      intronic chr6:17686898(-) A-I      intronic chr6:17689860(-) A-I      intronic chr6:17635695(-) A-I      intronic chr6:17696051(-) A-I      intronic chr6:17661379(-) A-I      intronic chr6:17666580(-) A-I      intronic chr6:17617119(-) A-I      intronic chr6:17663565(-) A-I      intronic chr6:17620146(-) A-I      intronic chr6:17645217(-) A-I      intronic chr6:17656766(-) A-I      intronic chr6:17668383(-) A-I      intronic chr6:17657673(-) A-I      intronic chr6:17655922(-) A-I      intronic chr6:17622596(-) A-I      intronic chr6:17661544(-) A-I      intronic chr6:17645195(-) A-I      intronic chr6:17636422(-) A-I      intronic chr6:17668592(-) A-I      intronic chr6:17634806(-) A-I      intronic chr6:17689572(-) A-I      intronic chr6:17635619(-) A-I      intronic chr6:17643499(-) A-I      intronic chr6:17647187(-) A-I      intronic chr6:17656286(-) A-I      intronic chr6:17618869(-) A-I      intronic chr6:17617049(-) A-I      intronic chr6:17620207(-) A-I      intronic chr6:17668505(-) A-I      intronic chr6:17634963(-) A-I      intronic chr6:17659883(-) A-I      intronic chr6:17636421(-) A-I      intronic chr6:17655858(-) A-I      intronic chr6:17645556(-) A-I      intronic chr6:17671179(-) A-I      intronic chr6:17672237(-) A-I      intronic chr6:17655878(-) A-I      intronic chr6:17654621(-) A-I      intronic chr6:17641139(-) A-I      intronic chr6:17622493(-) A-I      intronic chr6:17654746(-) A-I      intronic chr6:17656279(-) A-I      intronic chr6:17666663(-) A-I      intronic chr6:17657556(-) A-I      intronic chr6:17645579(-) A-I      intronic chr6:17657528(-) A-I      intronic chr6:17651338(-) A-I      intronic chr6:17659772(-) A-I      intronic chr6:17622513(-) A-I      intronic chr6:17659836(-) A-I      intronic chr6:17636466(-) A-I      intronic chr6:17657712(-) A-I      intronic chr6:17641012(-) A-I      intronic chr6:17640908(-) A-I      intronic chr6:17659809(-) A-I      intronic chr6:17654717(-) A-I      intronic chr6:17699571(-) A-I      intronic chr6:17655805(-) A-I      intronic chr6:17655781(-) A-I      intronic chr6:17663571(-) A-I      intronic chr6:17659801(-) A-I      intronic chr6:17656821(-) A-I      intronic chr6:17618030(-) A-I      intronic chr6:17617154(-) A-I      intronic chr6:17689900(-) A-I      intronic chr6:17658545(-) A-I      intronic chr6:17636520(-) A-I      intronic chr6:17634850(-) A-I      intronic chr6:17645617(-) A-I      intronic chr6:17617252(-) A-I      intronic chr6:17622668(-) A-I      intronic chr6:17668548(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	NUP153	chr6:17636479(-) A-I intron -    22327324 chr6:17645617(-) A-I intron -    22327324 chr6:17658037(-) A-I intron -    21960545 chr6:17658623(-) A-I intron -    21960545 chr6:17617049(-) A-G intron -    22484847 chr6:17617073(-) A-G intron -    22484847 chr6:17617119(-) A-G intron -    22484847 chr6:17617151(-) A-G intron -    22484847 chr6:17617154(-) A-G intron -    22484847 chr6:17617157(-) A-G intron -    22484847 chr6:17617252(-) A-G intron -    22484847 chr6:17617891(-) A-G intron -    22484847 chr6:17617902(-) A-G intron -    22484847 chr6:17617954(-) A-G intron -    22484847 chr6:17618935(-) A-G intron -    22484847 chr6:17619069(-) A-G intron -    22484847 chr6:17620146(-) A-G intron -    22484847 chr6:17620207(-) A-G intron -    22484847 chr6:17622430(-) A-G intron -    22484847 chr6:17622493(-) A-G intron -    22484847 chr6:17622636(-) A-G intron -    22484847 chr6:17623172(-) A-G intron -    22484847 chr6:17623274(-) A-G intron -    22484847 chr6:17623278(-) A-G intron -    22484847 chr6:17635479(-) A-G intron -    22484847 chr6:17635505(-) A-G intron -    22484847 chr6:17635619(-) A-G intron -    22484847 chr6:17635695(-) A-G intron -    22484847 chr6:17635757(-) A-G intron -    22484847 chr6:17635923(-) A-G intron -    22484847 chr6:17635925(-) A-G intron -    22484847 chr6:17636382(-) A-G intron -    22484847 chr6:17636402(-) A-G intron -    22484847 chr6:17636418(-) A-G intron -    22484847 chr6:17636421(-) A-G intron -    22484847 chr6:17636422(-) A-G intron -    22484847 chr6:17636457(-) A-G intron -    22484847 chr6:17636466(-) A-G intron -    22484847 chr6:17636479(-) A-G intron -    22484847 chr6:17636519(-) A-G intron -    22484847 chr6:17636520(-) A-G intron -    22484847 chr6:17636552(-) A-G intron -    22484847 chr6:17636558(-) A-G intron -    22484847 chr6:17640946(-) A-G intron -    22484847 chr6:17645195(-) A-G intron -    22484847 chr6:17645217(-) A-G intron -    22484847 chr6:17645280(-) A-G intron -    22484847 chr6:17645603(-) A-G intron -    22484847 chr6:17645617(-) A-G intron -    22484847 chr6:17645805(-) A-G intron -    22484847 chr6:17647072(-) T-C intron -    22484847 chr6:17647084(-) A-G intron -    22484847 chr6:17647111(-) A-G intron -    22484847 chr6:17651413(-) A-G intron -    22484847 chr6:17651474(-) A-G intron -    22484847 chr6:17654681(-) A-G intron -    22484847 chr6:17654707(-) A-G intron -    22484847 chr6:17654717(-) A-G intron -    22484847 chr6:17654730(-) A-G intron -    22484847 chr6:17654746(-) A-G intron -    22484847 chr6:17654776(-) A-G intron -    22484847 chr6:17654823(-) A-G intron -    22484847 chr6:17654824(-) A-G intron -    22484847 chr6:17655705(-) C-T intron -    22484847 chr6:17655781(-) A-G intron -    22484847 chr6:17655782(-) A-G intron -    22484847 chr6:17655813(-) A-G intron -    22484847 chr6:17655822(-) A-G intron -    22484847 chr6:17655823(-) A-G intron -    22484847 chr6:17655858(-) A-G intron -    22484847 chr6:17655862(-) A-G intron -    22484847 chr6:17655864(-) A-G intron -    22484847 chr6:17655888(-) A-G intron -    22484847 chr6:17655898(-) A-G intron -    22484847 chr6:17655927(-) A-G intron -    22484847 chr6:17655965(-) A-G intron -    22484847 chr6:17656279(-) A-G intron -    22484847 chr6:17656286(-) A-G intron -    22484847 chr6:17656311(-) A-G intron -    22484847 chr6:17656314(-) A-G intron -    22484847 chr6:17656324(-) A-G intron -    22484847 chr6:17656344(-) C-G intron -    22484847 chr6:17656350(-) A-G intron -    22484847 chr6:17656354(-) A-G intron -    22484847 chr6:17656744(-) G-A intron -    22484847 chr6:17656766(-) A-G intron -    22484847 chr6:17657522(-) G-T intron -    22484847 chr6:17657528(-) A-G intron -    22484847 chr6:17657569(-) A-G intron -    22484847 chr6:17657687(-) A-G intron -    22484847 chr6:17657695(-) A-G intron -    22484847 chr6:17657712(-) A-G intron -    22484847 chr6:17657713(-) A-G intron -    22484847 chr6:17657787(-) A-G intron -    22484847 chr6:17658396(-) A-G intron -    22484847 chr6:17658456(-) A-G intron -    22484847 chr6:17658470(-) A-G intron -    22484847 chr6:17658503(-) A-G intron -    22484847 chr6:17658527(-) A-G intron -    22484847 chr6:17658540(-) A-G intron -    22484847 chr6:17658544(-) A-G intron -    22484847 chr6:17658545(-) A-G intron -    22484847 chr6:17658586(-) A-G intron -    22484847 chr6:17659764(-) A-G intron -    22484847 chr6:17659771(-) A-G intron -    22484847 chr6:17659801(-) A-G intron -    22484847 chr6:17659806(-) A-G intron -    22484847 chr6:17659812(-) A-G intron -    22484847 chr6:17659828(-) G-A intron -    22484847 chr6:17659842(-) A-G intron -    22484847 chr6:17659855(-) A-G intron -    22484847 chr6:17659877(-) A-G intron -    22484847 chr6:17661379(-) A-G intron -    22484847 chr6:17661399(-) A-C intron -    22484847 chr6:17661445(-) A-G intron -    22484847 chr6:17661462(-) A-G intron -    22484847 chr6:17661488(-) A-G intron -    22484847 chr6:17661543(-) A-G intron -    22484847 chr6:17661544(-) A-G intron -    22484847 chr6:17666083(-) A-G intron -    22484847 chr6:17666084(-) A-G intron -    22484847 chr6:17666475(-) A-G intron -    22484847 chr6:17666522(-) A-G intron -    22484847 chr6:17666580(-) A-G intron -    22484847 chr6:17666662(-) A-G intron -    22484847 chr6:17666663(-) A-G intron -    22484847 chr6:17667747(-) A-G intron -    22484847 chr6:17667759(-) A-G intron -    22484847 chr6:17667781(-) A-G intron -    22484847 chr6:17668422(-) A-G intron -    22484847 chr6:17668451(-) A-G intron -    22484847 chr6:17668504(-) A-G intron -    22484847 chr6:17668548(-) A-G intron -    22484847 chr6:17668583(-) A-G intron -    22484847 chr6:17668816(-) A-G intron -    22484847 chr6:17668857(-) A-G intron -    22484847 chr6:17668962(-) A-G intron -    22484847 chr6:17668998(-) A-G intron -    22484847 chr6:17669412(-) A-G intron -    22484847 chr6:17671179(-) A-G intron -    22484847 chr6:17671235(-) A-G intron -    22484847 chr6:17672237(-) A-G intron -    22484847 chr6:17673410(-) A-G intron -    22484847 chr6:17674918(-) A-G intron -    22484847 chr6:17686303(-) A-G intron -    22484847 chr6:17686370(-) A-G intron -    22484847 chr6:17686724(-) A-G intron -    22484847 chr6:17686898(-) A-G intron -    22484847 chr6:17689572(-) A-G intron -    22484847 chr6:17689587(-) A-G intron -    22484847 chr6:17689860(-) A-G intron -    22484847 chr6:17689900(-) A-G intron -    22484847 chr6:17690394(-) A-G intron -    22484847 chr6:17691391(-) C-T intron -    22484847 chr6:17692170(-) A-G intron -    22484847 chr6:17692693(-) A-G intron -    22484847 chr6:17692701(-) A-G intron -    22484847 chr6:17696051(-) A-G intron -    22484847 chr6:17702839(-) T-C intron -    22484847 chr6:17705165(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	NUP153	chr6:17616011-17616012(-) m6A 3'UTR       24284625//27773535//22608085 chr6:17616127-17616128(-) m6A 3'UTR       24284625//24209618//24981863//28052920//26404942//27773535//22608085 chr6:17616220-17616221(-) m6A 3'UTR       24284625//24209618//24981863//28052920//27773535//22575960//22608085 chr6:17616350-17616351(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22575960//22608085 chr6:17616377-17616378(-) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr6:17616877-17616878(-) m6A CDS       24284625 chr6:17624981-17624982(-) m6A CDS       27773535 chr6:17624995-17624996(-) m6A CDS       27773535 chr6:17625038-17625039(-) m6A CDS       27773535 chr6:17625043-17625044(-) m6A CDS       27773535 chr6:17626162-17626163(-) m6A CDS       24284625//27773535 chr6:17626252-17626253(-) m6A CDS       24284625//24981863//27773535 chr6:17626358-17626359(-) m6A CDS       24284625 chr6:17629008-17629009(-) m6A CDS       24981863//27371828 chr6:17629111-17629112(-) m6A CDS       24284625//24981863//26404942//27773535//27371828//22608085 chr6:17629122-17629123(-) m6A CDS       24284625//24981863//26404942//27773535//27371828//22608085 chr6:17629230-17629231(-) m6A CDS       24284625//24209618//24981863//26404942//27773535//27371828//22608085 chr6:17629266-17629267(-) m6A CDS       24284625//24209618//24981863//26404942//27773535//27371828//22608085 chr6:17629275-17629276(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr6:17629298-17629299(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr6:17629390-17629391(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr6:17629411-17629412(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr6:17629477-17629478(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//22575960//22608085 chr6:17629567-17629568(-) m6A CDS       24284625//24981863//26404942//22608085 chr6:17629598-17629599(-) m6A CDS       24284625//24981863//26404942//22608085 chr6:17629680-17629681(-) m6A CDS       24284625//24981863//26404942//27371828//22608085 chr6:17629742-17629743(-) m6A CDS       24284625//24981863//26404942//27371828//22608085 chr6:17632939-17632940(-) m6A CDS       24284625 chr6:17632972-17632973(-) m6A CDS       24284625 chr6:17632989-17632990(-) m6A CDS       24284625 chr6:17637387-17637388(-) m6A CDS       24284625//27773535 chr6:17637418-17637419(-) m6A CDS       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr6:17637542-17637543(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr6:17637593-17637594(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr6:17637600-17637601(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr6:17637608-17637609(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr6:17637639-17637640(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr6:17637687-17637688(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr6:17637697-17637698(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr6:17637710-17637711(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr6:17637731-17637732(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr6:17637752-17637753(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr6:17637764-17637765(-) m6A CDS       25456834//24981863//27371828 chr6:17637768-17637769(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr6:17637823-17637824(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr6:17637835-17637836(-) m6A CDS       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085 chr6:17637930-17637931(-) m6A CDS       24284625//24209618//27773535 chr6:17649397-17649398(-) m6A CDS       24981863//26404942//27773535 chr6:17688709-17688710(-) m6A CDS       24981863//26404942//27773535 chr6:17688748-17688749(-) m6A CDS       24981863//27773535 chr6:17706723-17706724(-) m6A 5'UTR       - chr6:17706736-17706737(-) m6A 5'UTR       - chr6:17706853-17706854(-) m6A 5'UTR       - chr6:17706895-17706896(-) m6A 5'UTR       - chr6:17706910-17706911(-) Gm 5'UTR       - chr6:17706933-17706934(-) m6A 5'UTR       - chr6:17706978-17706979(-) m6A 5'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsa-miR-513a-5p	Exosome B cell line (Raji)|Jurkat-derived T cell line (J77cl20)     21505438 Exosome Brain tissue     23382797 Exosome Breast cancer cell lines (MCF-7|MDA-MB-231)     24468161 Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     - Microvesicle Seminal plasma     23539611 Microvesicle Cell lines(GBM46|GBM8|HaCaT|K562|MCF-10A|MCF-7|MGG75)|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocytes     - Mitochondrion HeLa cells     27396686 Mitochondrion HeLa cells     27563705 Mitochondrion Cell line (HeLa)     21695135
	NUP153	Chromatin HCC cell line (HepG2)|K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     - Insoluble cytoplasm HCC cell line (HepG2)     - Membrane HCC cell line (HepG2)|K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Colon cancer cells     24393600 Nucleus HeLa-S3 cells|K562 cells     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID	Function
ncDR	hsa-miR-513a-5p	[(1R,2S,6R,7R,9S,12S,13S)-13-(Acetyloxymethyl)-12-hydroxy-9-methyl-5-methylidene-4-oxo-3,14-dioxatricyclo[7.4.1.02,6]tetradecan-7-yl] (Z)-2-(acetyloxymethyl)but-2-enoate 90473692 Drug sensitive Clothixamide maleate 76972759 Drug sensitive Indolo[2,1-b]quinazoline-6,12-dione 73549 Drug sensitive Piperidinium pentamethylenedithiocarbamate 72508 Drug sensitive Phosphotrienin 6913994 Drug sensitive Pyrazolo[1,5-b]pyridazine deriv. 40 6539382 Drug resistant Cisplatin 5702198 Drug sensitive Tetrocarcin A, sodium salt 54724658 Drug sensitive Antineoplastic-690266 5469577 Drug sensitive p-Chloranilinum[bis(p-chloraniline)dioxalatoruthenate(III)] 54608061 Drug sensitive Heliangolide 5384466 Drug sensitive N-(5-Ethylsulfonyl-2-methoxyphenyl)-5-[3-(2-fluorophenyl)phenyl]-1,3-oxazol-2-amine 5329875 Drug resistant Pyrimethamine 4993 Drug sensitive 9-beta-D-Xylofuranosyladenine 447916 Drug resistant 10-Hydroxy-5-methoxy-1-(2-methyloxiran-2-yl)-1,2-dihydrofuro[2,3-c]xanthen-6-one 429905 Drug sensitive Sjg-136 393111 Drug sensitive 3-(4-Fluorophenyl)-3-(4-hydroxy-2-methylphenyl)-2-benzofuran-1(3H)-one 387973 Drug resistant 3-(4-Fluorophenyl)-3-(4-acetoxy-2-methylphenyl)phthalide 383342 Drug resistant 7-Chloro-6-(2-fluoroethylamino)quinoline-5,8-dione 379079 Drug sensitive N-(8-Hydroxy-6-methyl-1,4-dioxo-1,4-dihydro-2-naphthalenyl)acetamide 377214 Drug sensitive 1,2-Dimethyl-phenothiazone 369387 Drug sensitive 4-(1-Benzofuran-2-yl)-7-methoxychromen-2-one 364364 Drug resistant 4-Nitro-6-(trifluoromethyl)-2,1,3-benzoselenadiazole 362897 Drug sensitive Imidazole, 1-(4-chlorophenyl)-4-(4-nitrophenyl)- 355940 Drug resistant Dolastatin 11 354399 Drug sensitive Acronycine, 2-nitro 342903 Drug sensitive Dichloroallyl lawsone 277767 Drug sensitive 1-(2-Chloroethyl)-3-(2,6-dioxo-3-piperidyl)-1-nitrosourea 26328 Drug sensitive 2'-Deoxy-5-(trifluoromethyl)uridine 253083 Drug sensitive Dechlorinated rebeccamycin 24203043 Drug sensitive Azaribine 16574 Drug sensitive (10S,13S,16S,19S)-16-Butan-2-yl-10,11,14-trimethyl-3-(oxiran-2-ylmethyl)-13-propan-2-yl-4-oxa-1,8,11,14,17-pentazabicyclo[17.3.0]docosane-2,5,9,12,15,18-hexone 152771884 Drug sensitive 8-Azahypoxanthine 135410720 Drug sensitive (2R,4R,6S,7S,12S)-6,7,16-Trihydroxy-18-methoxy-12-methyl-3,13-dioxatricyclo[13.4.0.02,4]nonadeca-1(15),9,16,18-tetraene-8,14-dione 131676399 Drug sensitive Sendanin 12806435 Drug sensitive (1S,3R,7Z,9R,12S,13R,15S)-13-Butan-2-yl-13-hydroxy-3,7,12-trimethyl-10,14,16-trioxatetracyclo[7.5.1.13,6.012,15]hexadeca-5,7-diene-4,11-dione 11972510 Drug sensitive 1,3-diphenyl-4-(3-phenyl-4,5-dihydro-1H-pyrazol-5-yl)-1H-pyrazole - Drug resistant indole-2,3-dione, 5-methyl-, 3-[(o-nitrophenyl)hydrazone] - Drug resistant tgf.alpha.-pe40 - Drug resistant 2-chloro-3-amino-5,8-dihydoxy-1,4-naphthoquinone - Drug sensitive 4-quinazolone, 7-amino-3-(4-methoxyphenyl)-, hydrate - Drug sensitive acetamide, n-(2-mercaptoethyl)-, benzoate (6ci, 7ci) - Drug sensitive naphtho[2,3-d]-1,3-dioxepin-6,11-dione, 4-methyl- - Drug sensitive phenol, 4,4'-(5,5'-biisoxazole-3,3'-diyl)bis- - Drug sensitive Camptothecin Derivative - Drug sensitive crotoxin cd - Drug sensitive potassium[trichloro(isopropylamine)platinum] - Drug sensitive rh(iii)-amodiaquine - Drug sensitive

Resource	Symbol	Drug Name	PubChem ID	Function	Link
RNAInter	hsa-miR-513a-5p	Gemcitabine 60750 Drug interaction    RC00005743 Progesterone 5994 Drug interaction    RC00005739 Eloxatine 5310940 Drug interaction    RC00005744 Paclitaxel 36314 Drug interaction    RC00005742 Doxorubicin 31703 Drug interaction    RC00005741 Ursodeoxycholic acid 31401 Drug interaction    RC00005740 Chemotherapy - Drug interaction    RC00008873

Resource	Symbol	Drug Name	PubChem ID	PMID
NoncoRNA	hsa-miR-513a-5p	Doxorubicin 31703       25698578

Interaction Network (The top 100 interactions):

Interactor1: hsa-miR-513a-5p
Interactor2: NUP153

Evidence Support:

Weak-Evidence	PAR-CLIP
Support Database	ViRBase

References:

PMID	22291592	Target region	3'UTR
Source	ViRBase	Interactor1 expression	None
Tissue or cell line	EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells	Interactor2 expression	None
Description	We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.