Detail Information

Basic Information:


  VIRBase ID:  

HHID00059760

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-500a-3p:           RPS6KB1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-500a-3p RPS6KB1
miRBase
Accession/Entrez ID
MIMAT0002871 6198
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - p70 S6KA//p70(S6K)-alpha//p70-alpha//p70-S6K//PS6K//S6K//S6K-beta-1//S6K1//STK14A

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-500a-3p
rs782355787 chrX:50008482    A/G
rs781884483 chrX:50008488    C/G
rs782187953 chrX:50008486    AC/A
rs782715546 chrX:50008487    C/T
rs995124308 chrX:50008483    T/C

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR RPS6KB1
chr17:58020282(+) A-I      intronic
chr17:58020273(+) A-I      intronic
chr17:57972107(+) A-I      intronic
chr17:57978294(+) A-I      intronic
chr17:58020262(+) A-I      intronic
chr17:58014036(+) A-I      intronic
chr17:58009588(+) A-I      intronic
chr17:58009556(+) A-I      intronic
chr17:57978379(+) A-I      intronic
chr17:58021067(+) A-I      intronic
chr17:57978367(+) A-I      intronic
chr17:57978336(+) A-I      intronic
chr17:57978327(+) A-I      intronic
chr17:57977317(+) A-I      intronic
chr17:58021082(+) A-I      intronic
chr17:58021091(+) A-I      intronic
chr17:58021095(+) A-I      intronic
chr17:57972111(+) A-I      intronic
chr17:57972149(+) A-I      intronic
chr17:58021062(+) A-I      intronic
chr17:58021061(+) A-I      intronic
chr17:58020300(+) A-I      intronic
chr17:58020285(+) A-I      intronic
chr17:57985585(+) A-I      intronic
chr17:58022365(+) A-I      intronic
chr17:57984950(+) A-I      intronic
chr17:57984194(+) A-I      intronic
chr17:57999585(+) A-I      intronic
chr17:58022360(+) A-I      intronic
chr17:57999587(+) A-I      intronic
chr17:57999592(+) A-I      intronic
chr17:58000732(+) A-I      intronic
chr17:57984189(+) A-I      intronic
chr17:57981546(+) A-I      intronic
chr17:57981542(+) A-I      intronic
chr17:57981535(+) A-I      intronic
chr17:57980777(+) A-I      intronic
chr17:57980761(+) A-I      intronic
chr17:58020191(+) A-I      intronic
chr17:57980697(+) A-I      intronic
chr17:57980520(+) A-I      intronic
chr17:57980481(+) A-I      intronic
chr17:57980465(+) A-I      intronic
chr17:57980037(+) A-I      intronic
chr17:57979355(+) A-I      intronic
chr17:57978969(+) A-I      intronic
chr17:57978918(+) A-I      intronic
chr17:57978917(+) A-I      intronic
chr17:57978717(+) A-I      intronic
chr17:57978709(+) A-I      intronic
chr17:57978692(+) A-I      intronic
chr17:57978650(+) A-I      intronic
chr17:57978640(+) A-I      intronic
chr17:57978487(+) A-I      intronic
chr17:57978361(+) A-I      intronic
chr17:57978358(+) A-I      intronic
chr17:57978273(+) A-I      intronic
chr17:58000735(+) A-I      intronic
chr17:58001445(+) A-I      intronic
chr17:58001491(+) A-I      intronic
chr17:58001503(+) A-I      intronic
chr17:58001513(+) A-I      intronic
chr17:58001514(+) A-I      intronic
chr17:58001519(+) A-I      intronic
chr17:58022343(+) A-I      intronic
chr17:58022289(+) A-I      intronic
chr17:58005309(+) A-I      intronic
chr17:58005354(+) A-I      intronic
chr17:58005479(+) A-I      intronic
chr17:58009527(+) A-I      intronic
chr17:58009637(+) A-I      intronic
chr17:58014020(+) A-I      intronic
chr17:58014026(+) A-I      intronic
chr17:58014475(+) A-I      intronic
chr17:58016746(+) A-I      intronic
chr17:57978267(+) A-I      intronic
chr17:58016881(+) A-I      intronic
chr17:57978259(+) A-I      intronic
chr17:57978251(+) A-I      intronic
chr17:58019184(+) A-I      intronic
chr17:57987214(+) A-I      intronic
chr17:57972066(+) A-I      intronic
chr17:57972151(+) A-I      intronic
chr17:57972228(+) A-I      intronic
chr17:57972229(+) A-I      intronic
chr17:57972240(+) A-I      intronic
chr17:57973577(+) A-I      intronic
chr17:57973641(+) A-I      intronic
chr17:57973654(+) A-I      intronic
chr17:57975072(+) A-I      intronic
chr17:57975130(+) A-I      intronic
chr17:57975205(+) A-I      intronic
chr17:57975219(+) A-I      intronic
chr17:57975247(+) A-I      intronic
chr17:57972035(+) A-I      intronic
chr17:57975915(+) A-I      intronic
chr17:57975919(+) A-I      intronic
chr17:57975932(+) A-I      intronic
chr17:57975956(+) A-I      intronic
chr17:57976039(+) A-I      intronic
chr17:57976059(+) A-I      intronic
chr17:57976434(+) A-I      intronic
chr17:57976454(+) A-I      intronic
chr17:57976480(+) A-I      intronic
chr17:57977293(+) A-I      intronic
chr17:58014484(+) A-I      intronic
chr17:57977860(+) A-I      intronic
chr17:57977866(+) A-I      intronic
chr17:57977955(+) A-I      intronic
chr17:57978362(+) A-I      intronic
chr17:57987211(+) A-I      intronic
chr17:57987171(+) A-I      intronic
chr17:57987028(+) A-I      intronic
chr17:57977901(+) A-I      intronic
chr17:57986983(+) A-I      intronic
chr17:57987216(+) A-I      intronic
chr17:57987242(+) A-I      intronic
chr17:57987505(+) A-I      intronic
chr17:57989179(+) A-I      intronic
chr17:57989192(+) A-I      intronic
chr17:57989209(+) A-I      intronic
chr17:57989237(+) A-I      intronic
chr17:58019284(+) A-I      intronic
chr17:58019337(+) A-I      intronic
chr17:58019430(+) A-I      intronic
chr17:58020155(+) A-I      intronic
chr17:58020164(+) A-I      intronic
chr17:58020179(+) A-I      intronic
chr17:58020188(+) A-I      intronic
chr17:58020189(+) A-I      intronic
chr17:58020194(+) A-I      intronic
chr17:58020256(+) A-I      intronic
chr17:58020985(+) A-I      intronic
chr17:58021028(+) A-I      intronic
chr17:58022179(+) A-I      intronic
chr17:57992612(+) A-I      intronic
chr17:58022208(+) A-I      intronic
chr17:58022211(+) A-I      intronic
chr17:57975824(+) A-I      intronic
chr17:57992630(+) A-I      intronic
chr17:57995870(+) A-I      intronic
chr17:57996256(+) A-I      intronic
chr17:57996292(+) A-I      intronic
chr17:57996653(+) A-I      intronic
chr17:57996657(+) A-I      intronic
chr17:57996736(+) A-I      intronic
chr17:57999488(+) A-I      intronic
chr17:57999501(+) A-I      intronic
chr17:57999502(+) A-I      intronic
chr17:57999543(+) A-I      intronic
chr17:58022253(+) A-I      intronic
chr17:58022259(+) A-I      intronic
chr17:58022260(+) A-I      intronic
chr17:57986826(+) A-I      intronic
chr17:57985709(+) A-I      intronic
chr17:58022372(+) A-I      intronic
chr17:57979671(+) A-I      intronic
chr17:58010100(+) A-I      intronic
chr17:57989191(+) A-I      intronic
chr17:58005399(+) A-I      intronic
chr17:58014360(+) A-I      intronic
chr17:57977257(+) A-I      intronic
chr17:57976517(+) A-I      intronic
chr17:57976015(+) A-I      intronic
chr17:57972155(+) A-I      intronic
chr17:57980646(+) A-I      intronic
chr17:57972092(+) A-I      intronic
chr17:57980715(+) A-I      intronic
chr17:57985593(+) A-I      intronic
chr17:57980200(+) A-I      intronic
chr17:57986889(+) A-I      intronic
chr17:57980793(+) A-I      intronic
chr17:58014025(+) A-I      intronic
chr17:57975116(+) A-I      intronic
chr17:57972022(+) A-I      intronic
chr17:57984184(+) A-I      intronic
chr17:57978922(+) A-I      intronic
chr17:57978345(+) A-I      intronic
chr17:58019404(+) A-I      intronic
chr17:57986461(+) A-I      intronic
chr17:58021073(+) A-I      intronic
chr17:58013967(+) A-I      intronic
chr17:57980756(+) A-I      intronic
chr17:58017849(+) A-I      intronic
chr17:57975246(+) A-I      intronic
chr17:58010135(+) A-I      intronic
chr17:57984922(+) A-I      intronic
chr17:57988434(+) A-I      intronic
chr17:57978771(+) A-I      intronic
chr17:57996293(+) A-I      intronic
chr17:58010012(+) A-I      intronic
chr17:57978464(+) A-I      intronic
chr17:57978289(+) A-I      intronic
chr17:58019426(+) A-I      intronic
chr17:57996254(+) A-I      intronic
chr17:57977439(+) A-I      intronic
chr17:57983790(+) A-I      intronic
chr17:57980207(+) A-I      intronic
chr17:58004545(+) A-I      intronic
chr17:58020290(+) A-I      intronic
chr17:58000173(+) A-I      intronic
chr17:57977449(+) A-I      intronic
chr17:57977961(+) A-I      intronic
chr17:58021871(+) A-I      intronic
chr17:58009944(+) A-I      intronic
chr17:57973094(+) A-I      intronic
chr17:57988429(+) A-I      intronic
chr17:57986388(+) A-I      intronic
chr17:58009762(+) A-I      intronic
chr17:57981506(+) A-I      intronic
chr17:58000584(+) A-I      intronic
chr17:57996722(+) A-I      intronic
chr17:57987582(+) A-I      intronic
chr17:58021848(+) A-I      intronic
chr17:58005398(+) A-I      intronic
chr17:58021054(+) A-I      intronic
chr17:58020289(+) A-I      intronic
chr17:57984235(+) A-I      intronic
chr17:58014404(+) A-I      intronic
chr17:57980213(+) A-I      intronic
chr17:57987172(+) A-I      intronic
chr17:57985695(+) A-I      intronic
chr17:58009693(+) A-I      intronic
chr17:57976405(+) A-I      intronic
chr17:58018779(+) A-I      intronic
chr17:57980575(+) A-I      intronic
chr17:57980677(+) A-I      intronic
chr17:58000408(+) A-I      intronic
chr17:58019481(+) A-I      intronic
chr17:58002319(+) A-I      intronic
chr17:57996761(+) A-I      intronic
chr17:58001440(+) A-I      intronic
chr17:57980292(+) A-I      intronic
chr17:57975149(+) A-I      intronic
chr17:58009626(+) A-I      intronic
chr17:57977462(+) A-I      intronic
chr17:58004544(+) A-I      intronic
chr17:58010006(+) A-I      intronic
chr17:57977807(+) A-I      intronic
chr17:57978268(+) A-I      intronic
chr17:58010042(+) A-I      intronic
chr17:58014056(+) A-I      intronic
chr17:57998091(+) A-I      intronic
chr17:57989071(+) A-I      intronic
chr17:57987405(+) A-I      intronic
chr17:58014097(+) A-I      intronic
chr17:58001490(+) A-I      intronic
chr17:57976092(+) A-I      intronic
chr17:57980123(+) A-I      intronic
chr17:57972201(+) A-I      intronic
chr17:57982621(+) A-I      intronic
chr17:57977288(+) A-I      intronic
chr17:57976510(+) A-I      intronic
chr17:57986831(+) A-I      intronic
chr17:57972099(+) A-I      intronic
chr17:58009510(+) A-I      intronic
chr17:57980099(+) A-I      intronic
chr17:58019435(+) A-I      intronic
chr17:57977392(+) A-I      intronic
chr17:57979130(+) A-I      intronic
chr17:57973820(+) A-I      intronic
chr17:57972002(+) A-I      intronic
chr17:57979276(+) A-I      intronic
chr17:57976418(+) A-I      intronic
chr17:57980751(+) A-I      intronic
chr17:57978437(+) A-I      intronic
chr17:58017925(+) A-I      intronic
chr17:57979358(+) A-I      intronic
chr17:57979231(+) A-I      intronic
chr17:57978402(+) A-I      intronic
chr17:57987042(+) A-I      intronic
chr17:57976286(+) A-I      intronic
chr17:57980215(+) A-I      intronic
chr17:58009743(+) A-I      intronic
chr17:57987667(+) A-I      intronic
chr17:58004508(+) A-I      intronic
chr17:57983749(+) A-I      intronic
chr17:57978784(+) A-I      intronic
chr17:57972864(+) A-I      intronic
chr17:58000332(+) A-I      intronic
chr17:58021159(+) A-I      intronic
chr17:58009698(+) A-I      intronic
chr17:58009578(+) A-I      intronic
chr17:57986517(+) A-I      intronic
chr17:57977910(+) A-I      intronic
chr17:57977292(+) A-I      intronic
chr17:57986758(+) A-I      intronic
chr17:57976308(+) A-I      intronic
chr17:57984238(+) A-I      intronic
chr17:57987425(+) A-I      intronic
chr17:57976309(+) A-I      intronic
chr17:58004968(+) A-I      intronic
chr17:57978428(+) A-I      intronic
chr17:57980041(+) A-I      intronic
chr17:58000045(+) A-I      intronic
chr17:57982317(+) A-I      intronic
chr17:57999676(+) A-I      intronic
chr17:58009738(+) A-I      intronic
chr17:57986901(+) A-I      intronic
chr17:58000345(+) A-I      intronic
chr17:58013966(+) A-I      intronic
chr17:57979143(+) A-I      intronic
chr17:57996795(+) A-I      intronic
chr17:58001512(+) A-I      intronic
chr17:57972248(+) A-I      intronic
chr17:57980739(+) A-I      intronic
chr17:57989146(+) A-I      intronic
chr17:57980502(+) A-I      intronic
chr17:58017781(+) A-I      intronic
chr17:57973177(+) A-I      intronic
chr17:58014021(+) A-I      intronic
chr17:58001439(+) A-I      intronic
chr17:57978322(+) A-I      intronic
chr17:57972105(+) A-I      intronic
chr17:57981581(+) A-I      intronic
chr17:57982491(+) A-I      intronic
chr17:57973784(+) A-I      intronic
chr17:57987189(+) A-I      intronic
chr17:57972867(+) A-I      intronic
chr17:57996671(+) A-I      intronic
chr17:58005337(+) A-I      intronic
chr17:57992280(+) A-I      intronic
chr17:57980453(+) A-I      intronic
chr17:57999970(+) A-I      intronic
chr17:57986768(+) A-I      intronic
chr17:57979970(+) A-I      intronic
chr17:57979259(+) A-I      intronic
chr17:58014412(+) A-I      intronic
chr17:57981625(+) A-I      intronic
chr17:57985025(+) A-I      intronic
chr17:57987226(+) A-I      intronic
chr17:57976003(+) A-I      intronic
chr17:57980201(+) A-I      intronic
chr17:58000399(+) A-I      intronic
chr17:57979196(+) A-I      intronic
chr17:57986812(+) A-I      intronic
chr17:58014354(+) A-I      intronic
chr17:57987611(+) A-I      intronic
chr17:57978895(+) A-I      intronic
chr17:57996727(+) A-I      intronic
chr17:57978321(+) A-I      intronic
chr17:57988410(+) A-I      intronic
chr17:57987119(+) A-I      intronic
chr17:58009694(+) A-I      intronic
chr17:58020230(+) A-I      intronic
chr17:57979217(+) A-I      intronic
chr17:57980286(+) A-I      intronic
chr17:57984999(+) A-I      intronic
chr17:58021825(+) A-I      intronic
chr17:58017777(+) A-I      intronic
chr17:57987067(+) A-I      intronic
chr17:57973655(+) A-I      intronic
chr17:58014348(+) A-I      intronic
chr17:58020226(+) A-I      intronic
chr17:57985693(+) A-I      intronic
chr17:57989103(+) A-I      intronic
chr17:57978401(+) A-I      intronic
chr17:57977340(+) A-I      intronic
chr17:57988431(+) A-I      intronic
chr17:57979502(+) A-I      intronic
chr17:58009565(+) A-I      intronic
chr17:57979566(+) A-I      intronic
chr17:57977476(+) A-I      intronic
chr17:58020157(+) A-I      intronic
chr17:57978337(+) A-I      intronic
chr17:58001525(+) A-I      intronic
chr17:57980458(+) A-I      intronic
chr17:57987000(+) A-I      intronic
chr17:57985000(+) A-I      intronic
chr17:57992216(+) A-I      intronic
chr17:57988970(+) A-I      intronic
chr17:57988468(+) A-I      intronic
chr17:58010097(+) A-I      intronic
chr17:57978309(+) A-I      intronic
chr17:58022264(+) A-I      intronic
chr17:57980413(+) A-I      intronic
chr17:57973045(+) A-I      intronic
chr17:57988382(+) A-I      intronic
chr17:57980785(+) A-I      intronic
chr17:57972083(+) A-I      intronic
chr17:58014060(+) A-I      intronic
chr17:57980055(+) A-I      intronic
chr17:57979505(+) A-I      intronic
chr17:57980457(+) A-I      intronic
chr17:57992257(+) A-I      intronic
chr17:57985699(+) A-I      intronic
chr17:57978772(+) A-I      intronic
chr17:58021860(+) A-I      intronic
chr17:57976080(+) A-I      intronic
chr17:58013965(+) A-I      intronic
chr17:57978492(+) A-I      intronic
chr17:57996773(+) A-I      intronic
chr17:57978434(+) A-I      intronic
chr17:57972175(+) A-I      intronic
chr17:57986693(+) A-I      intronic
chr17:57975150(+) A-I      intronic
chr17:57994549(+) A-I      intronic
chr17:57986491(+) A-I      intronic
chr17:57980017(+) A-I      intronic
chr17:58009564(+) A-I      intronic
chr17:58010134(+) A-I      intronic
chr17:57978896(+) A-I      intronic
chr17:58014006(+) A-I      intronic
chr17:57973268(+) A-I      intronic
chr17:58009511(+) A-I      intronic
chr17:57976444(+) A-I      intronic
chr17:57996765(+) A-I      intronic
chr17:58020227(+) A-I      intronic
chr17:58009961(+) A-I      intronic
chr17:58019289(+) A-I      intronic
chr17:58021152(+) A-I      intronic
chr17:57977783(+) A-I      intronic
chr17:58010013(+) A-I      intronic
chr17:57977827(+) A-I      intronic
chr17:58017883(+) A-I      intronic
chr17:57973818(+) A-I      intronic
chr17:57986344(+) A-I      intronic
chr17:57980121(+) A-I      intronic
chr17:57992308(+) A-I      intronic
chr17:58010038(+) A-I      intronic
chr17:57978344(+) A-I      intronic
chr17:57977395(+) A-I      intronic
chr17:57988411(+) A-I      intronic
chr17:57989067(+) A-I      intronic
chr17:57980336(+) A-I      intronic
chr17:58001433(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED RPS6KB1
chr17:58013965(+) A-I intron -    22327324
chr17:57976510(+) A-G intron -    22484847
chr17:57979566(+) A-G intron -    22484847
chr17:57986693(+) A-G intron -    22484847
chr17:57988434(+) A-G intron -    22484847
chr17:58009510(+) A-G intron -    22484847
chr17:58009694(+) A-G intron -    22484847
chr17:58009698(+) A-G intron -    22484847
chr17:58013965(+) A-G intron -    22484847
chr17:58017777(+) A-G intron -    22484847
chr17:58017781(+) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase RPS6KB1
chr17:57970421-57970422(+) m6A 5'UTR       -
chr17:57970447-57970448(+) m6A 5'UTR       -
chr17:57970588-57970589(+) m6A 5'UTR//CDS//exon       24284625//24209618//24981863//22575960//22608085
chr17:57970597-57970598(+) m6A 5'UTR//CDS//exon       24284625//24209618//24981863//22575960//22608085
chr17:57970612-57970613(+) m6A 5'UTR//CDS//exon       24284625//24209618//24981863//22575960//22608085
chr17:57970636-57970637(+) m6A 5'UTR//CDS//exon       24284625//24209618//24981863//22575960
chr17:57970642-57970643(+) m6A 5'UTR//CDS//exon       24284625//24209618//24981863//22575960
chr17:57971189-57971190(+) m6A 3'UTR//5'UTR//intron       24981863
chr17:57984721-57984722(+) m6A 5'UTR//intron       24981863
chr17:57987944-57987945(+) m6A 3'UTR//CDS//exon       24209618//24981863
chr17:57987960-57987961(+) m6A 3'UTR//CDS//exon       24209618//24981863
chr17:57987969-57987970(+) m6A 3'UTR//CDS//exon       24209618//24981863
chr17:57990053-57990054(+) m6A 3'UTR//CDS//exon       24209618//24981863
chr17:57990081-57990082(+) m6A 3'UTR//CDS//exon       24209618//24981863
chr17:57990091-57990092(+) m6A 3'UTR//CDS//exon       24209618//24981863
chr17:57990113-57990114(+) m6A 3'UTR//CDS//exon       24209618//24981863
chr17:58022825-58022826(+) m6A 3'UTR//CDS//exon       -
chr17:58022868-58022869(+) m6A 3'UTR//CDS//exon       24284625
chr17:58023978-58023979(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr17:58024002-58024003(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr17:58024075-58024076(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr17:58024094-58024095(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr17:58024102-58024103(+) Y 3'UTR//CDS//exon//intron       26075521
chr17:58024267-58024268(+) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr17:58024276-58024277(+) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr17:58024330-58024331(+) m6A 3'UTR//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr17:58024355-58024356(+) m6A 3'UTR//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr17:58024434-58024435(+) m6A 3'UTR//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr17:58024555-58024556(+) m6A 3'UTR//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr17:58024581-58024582(+) m6A 3'UTR//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr17:58024608-58024609(+) m6A 3'UTR//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr17:58024617-58024618(+) m6A 3'UTR//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr17:58024644-58024645(+) m6A 3'UTR//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr17:58024715-58024716(+) m6A 3'UTR//intron       24981863//22608085
chr17:58024724-58024725(+) m6A 3'UTR//intron       24981863//22608085
chr17:58024766-58024767(+) m6A 3'UTR//intron       24981863//22608085
chr17:58024856-58024857(+) m6A 3'UTR//intron       22608085
chr17:58025927-58025928(+) m6A 3'UTR//intron       24284625
chr17:58025932-58025933(+) m6A 3'UTR//intron       24284625
chr17:58025950-58025951(+) m6A 3'UTR//intron       24284625//22608085
chr17:58026008-58026009(+) m6A 3'UTR//intron       24284625//24981863//22608085
chr17:58026077-58026078(+) m6A 3'UTR//intron       24981863//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-500a-3p
Exosome B cell line (Raji)|Primary dendritic cells     21505438
Exosome Brain tissue     23382797
Exosome Plasma     23663360
Exosome Human mast cell line (HMC-1)     24009880
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Plasma     23077538
Microvesicle Seminal plasma     23539611
Microvesicle Colon cancer cell line (LIM1863)|Fibroblasts|Mesenchymal stem cells|Urine     -
Mitochondrion Cell line (HEK-293|HeLa)     22984580
RPS6KB1
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -
Ribosome HEK-293 cells     22199352
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-500a-3p
Interactor2: RPS6KB1

Evidence Support:


Weak-Evidence PAR-CLIP
Support Database ViRBase

References:


PMID 22291592 Target region 3'UTR
Source ViRBase Interactor1 expression None
Tissue or cell line EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells Interactor2 expression None
Description We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.

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