Detail Information

Basic Information:


  VIRBase ID:  

HHID00057428

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-335-5p:           FAF2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-335-5p FAF2
miRBase
Accession/Entrez ID
MIMAT0000765 23197
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - ETEA//UBXD8//UBXN3B

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-335-5p
rs1302490829 chr7:130496145    A/G
rs1377015261 chr7:130496142    A/G
rs1393189017 chr7:130496140    G/A
rs1448957394 chr7:130496147    G/GT
rs1554436905 chr7:130496134    A/G
rs1554436906 chr7:130496137    A/G
rs371790774 chr7:130496139    C/T

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR FAF2
chr5:175891547(+) A-I      intronic
chr5:175890251(+) A-I      intronic
chr5:175906792(+) A-I      intronic
chr5:175905318(+) A-I      intronic
chr5:175905317(+) A-I      intronic
chr5:175905250(+) A-I      intronic
chr5:175890244(+) A-I      intronic
chr5:175890219(+) A-I      intronic
chr5:175890216(+) A-I      intronic
chr5:175890213(+) A-I      intronic
chr5:175889036(+) A-I      intronic
chr5:175888563(+) A-I      intronic
chr5:175888518(+) A-I      intronic
chr5:175888419(+) A-I      intronic
chr5:175888418(+) A-I      intronic
chr5:175924004(+) A-I      intronic
chr5:175912834(+) A-I      intronic
chr5:175894465(+) A-I      intronic
chr5:175905249(+) A-I      intronic
chr5:175905244(+) A-I      intronic
chr5:175888289(+) A-I      intronic
chr5:175888250(+) A-I      intronic
chr5:175888249(+) A-I      intronic
chr5:175888176(+) A-I      intronic
chr5:175888132(+) A-I      intronic
chr5:175888107(+) A-I      intronic
chr5:175887945(+) A-I      intronic
chr5:175884454(+) A-I      intronic
chr5:175884444(+) A-I      intronic
chr5:175884264(+) A-I      intronic
chr5:175884246(+) A-I      intronic
chr5:175884215(+) A-I      intronic
chr5:175883239(+) A-I      intronic
chr5:175883238(+) A-I      intronic
chr5:175883230(+) A-I      intronic
chr5:175883214(+) A-I      intronic
chr5:175883212(+) A-I      intronic
chr5:175883202(+) A-I      intronic
chr5:175883190(+) A-I      intronic
chr5:175883177(+) A-I      intronic
chr5:175883172(+) A-I      intronic
chr5:175883159(+) A-I      intronic
chr5:175883153(+) A-I      intronic
chr5:175883147(+) A-I      intronic
chr5:175883128(+) A-I      intronic
chr5:175883116(+) A-I      intronic
chr5:175883095(+) A-I      intronic
chr5:175882526(+) A-I      intronic
chr5:175882496(+) A-I      intronic
chr5:175882407(+) A-I      intronic
chr5:175882383(+) A-I      intronic
chr5:175882365(+) A-I      intronic
chr5:175881335(+) A-I      intronic
chr5:175881300(+) A-I      intronic
chr5:175881187(+) A-I      intronic
chr5:175881165(+) A-I      intronic
chr5:175881144(+) A-I      intronic
chr5:175880982(+) A-I      intronic
chr5:175880959(+) A-I      intronic
chr5:175880893(+) A-I      intronic
chr5:175880802(+) A-I      intronic
chr5:175880801(+) A-I      intronic
chr5:175879320(+) A-I      intronic
chr5:175879302(+) A-I      intronic
chr5:175879268(+) A-I      intronic
chr5:175879249(+) A-I      intronic
chr5:175879201(+) A-I      intronic
chr5:175879159(+) A-I      intronic
chr5:175879158(+) A-I      intronic
chr5:175903118(+) A-I      intronic
chr5:175878157(+) A-I      intronic
chr5:175877716(+) A-I      intronic
chr5:175903114(+) A-I      intronic
chr5:175902531(+) A-I      intronic
chr5:175902272(+) A-I      intronic
chr5:175877684(+) A-I      intronic
chr5:175877672(+) A-I      intronic
chr5:175877648(+) A-I      intronic
chr5:175877573(+) A-I      intronic
chr5:175876389(+) A-I      intronic
chr5:175876314(+) A-I      intronic
chr5:175900840(+) A-I      intronic
chr5:175881147(+) A-I      intronic
chr5:175900788(+) A-I      intronic
chr5:175899328(+) A-I      intronic
chr5:175897528(+) A-I      intronic
chr5:175897499(+) A-I      intronic
chr5:175881238(+) A-I      intronic
chr5:175881242(+) A-I      intronic
chr5:175881251(+) A-I      intronic
chr5:175897490(+) A-I      intronic
chr5:175897474(+) A-I      intronic
chr5:175897467(+) A-I      intronic
chr5:175897463(+) A-I      intronic
chr5:175896125(+) A-I      intronic
chr5:175896112(+) A-I      intronic
chr5:175881255(+) A-I      intronic
chr5:175881273(+) A-I      intronic
chr5:175891533(+) A-I      intronic
chr5:175895039(+) A-I      intronic
chr5:175895043(+) A-I      intronic
chr5:175895078(+) A-I      intronic
chr5:175895087(+) A-I      intronic
chr5:175912807(+) A-I      intronic
chr5:175912846(+) A-I      intronic
chr5:175896095(+) A-I      intronic
chr5:175895431(+) A-I      intronic
chr5:175889147(+) A-I      intronic
chr5:175895428(+) A-I      intronic
chr5:175895379(+) A-I      intronic
chr5:175895086(+) A-I      intronic
chr5:175895072(+) A-I      intronic
chr5:175895004(+) A-I      intronic
chr5:175916047(+) A-I      intronic
chr5:175894431(+) A-I      intronic
chr5:175892823(+) A-I      intronic
chr5:175892799(+) A-I      intronic
chr5:175892644(+) A-I      intronic
chr5:175892588(+) A-I      intronic
chr5:175892764(+) A-I      intronic
chr5:175928993(+) A-I      intronic
chr5:175892433(+) A-I      intronic
chr5:175928778(+) A-I      intronic
chr5:175924923(+) A-I      intronic
chr5:175924922(+) A-I      intronic
chr5:175892424(+) A-I      intronic
chr5:175892154(+) A-I      intronic
chr5:175892153(+) A-I      intronic
chr5:175892152(+) A-I      intronic
chr5:175892092(+) A-I      intronic
chr5:175892030(+) A-I      intronic
chr5:175891958(+) A-I      intronic
chr5:175891606(+) A-I      intronic
chr5:175891593(+) A-I      intronic
chr5:175891580(+) A-I      intronic
chr5:175891563(+) A-I      intronic
chr5:175894461(+) A-I      intronic
chr5:175924896(+) A-I      intronic
chr5:175924895(+) A-I      intronic
chr5:175923216(+) A-I      intronic
chr5:175921782(+) A-I      intronic
chr5:175921656(+) A-I      intronic
chr5:175917269(+) A-I      intronic
chr5:175917233(+) A-I      intronic
chr5:175917218(+) A-I      intronic
chr5:175917205(+) A-I      intronic
chr5:175917201(+) A-I      intronic
chr5:175917191(+) A-I      intronic
chr5:175876344(+) A-I      intronic
chr5:175876345(+) A-I      intronic
chr5:175876354(+) A-I      intronic
chr5:175917066(+) A-I      intronic
chr5:175916705(+) A-I      intronic
chr5:175916694(+) A-I      intronic
chr5:175916681(+) A-I      intronic
chr5:175916680(+) A-I      intronic
chr5:175916664(+) A-I      intronic
chr5:175911755(+) A-I      intronic
chr5:175911753(+) A-I      intronic
chr5:175911630(+) A-I      intronic
chr5:175911056(+) A-I      intronic
chr5:175910961(+) A-I      intronic
chr5:175910844(+) A-I      intronic
chr5:175908543(+) A-I      intronic
chr5:175908537(+) A-I      intronic
chr5:175907624(+) A-I      intronic
chr5:175907432(+) A-I      intronic
chr5:175906810(+) A-I      intronic
chr5:175916613(+) A-I      intronic
chr5:175892642(+) A-I      intronic
chr5:175898911(+) A-I      intronic
chr5:175908812(+) A-I      intronic
chr5:175895865(+) A-I      intronic
chr5:175911622(+) A-I      intronic
chr5:175921599(+) A-I      intronic
chr5:175929461(+) A-I      intronic
chr5:175892630(+) A-I      intronic
chr5:175883256(+) A-I      intronic
chr5:175878252(+) A-I      intronic
chr5:175917294(+) A-I      intronic
chr5:175912754(+) A-I      intronic
chr5:175916704(+) A-I      intronic
chr5:175912824(+) A-I      intronic
chr5:175888144(+) A-I      intronic
chr5:175881243(+) A-I      intronic
chr5:175898830(+) A-I      intronic
chr5:175890811(+) A-I      intronic
chr5:175911813(+) A-I      intronic
chr5:175881295(+) A-I      intronic
chr5:175889022(+) A-I      intronic
chr5:175882370(+) A-I      intronic
chr5:175923225(+) A-I      intronic
chr5:175902529(+) A-I      intronic
chr5:175924950(+) A-I      intronic
chr5:175888431(+) A-I      intronic
chr5:175888195(+) A-I      intronic
chr5:175882375(+) A-I      intronic
chr5:175879176(+) A-I      intronic
chr5:175921768(+) A-I      intronic
chr5:175902288(+) A-I      intronic
chr5:175894904(+) A-I      intronic
chr5:175882575(+) A-I      intronic
chr5:175884382(+) A-I      intronic
chr5:175882590(+) A-I      intronic
chr5:175897321(+) A-I      intronic
chr5:175892455(+) A-I      intronic
chr5:175928824(+) A-I      intronic
chr5:175880926(+) A-I      intronic
chr5:175924889(+) A-I      intronic
chr5:175903733(+) A-I      intronic
chr5:175887810(+) A-I      intronic
chr5:175909779(+) A-I      intronic
chr5:175905214(+) A-I      intronic
chr5:175899180(+) A-I      intronic
chr5:175897480(+) A-I      intronic
chr5:175895055(+) A-I      intronic
chr5:175929034(+) A-I      intronic
chr5:175889372(+) A-I      intronic
chr5:175892006(+) A-I      intronic
chr5:175892127(+) A-I      intronic
chr5:175881296(+) A-I      intronic
chr5:175890138(+) A-I      intronic
chr5:175888458(+) A-I      intronic
chr5:175879152(+) A-I      intronic
chr5:175882589(+) A-I      intronic
chr5:175877730(+) A-I      intronic
chr5:175894474(+) A-I      intronic
chr5:175897457(+) A-I      intronic
chr5:175904362(+) A-I      intronic
chr5:175929960(+) A-I      intronic
chr5:175895136(+) A-I      intronic
chr5:175903111(+) A-I      intronic
chr5:175929460(+) A-I      intronic
chr5:175881247(+) A-I      intronic
chr5:175878162(+) A-I      intronic
chr5:175894449(+) A-I      intronic
chr5:175883142(+) A-I      intronic
chr5:175881225(+) A-I      intronic
chr5:175895060(+) A-I      intronic
chr5:175878117(+) A-I      intronic
chr5:175880864(+) A-I      intronic
chr5:175903008(+) A-I      intronic
chr5:175899300(+) A-I      intronic
chr5:175894509(+) A-I      intronic
chr5:175921575(+) A-I      intronic
chr5:175923214(+) A-I      intronic
chr5:175912810(+) A-I      intronic
chr5:175887732(+) A-I      intronic
chr5:175911638(+) A-I      intronic
chr5:175917165(+) A-I      intronic
chr5:175923260(+) A-I      intronic
chr5:175890116(+) A-I      intronic
chr5:175916643(+) A-I      intronic
chr5:175916587(+) A-I      intronic
chr5:175883282(+) A-I      intronic
chr5:175890292(+) A-I      intronic
chr5:175881274(+) A-I      intronic
chr5:175930910(+) A-I      intronic
chr5:175902380(+) A-I      intronic
chr5:175884283(+) A-I      intronic
chr5:175895005(+) A-I      intronic
chr5:175881283(+) A-I      intronic
chr5:175903734(+) A-I      intronic
chr5:175888564(+) A-I      intronic
chr5:175895118(+) A-I      intronic
chr5:175883320(+) A-I      intronic
chr5:175879321(+) A-I      intronic
chr5:175878194(+) A-I      intronic
chr5:175881529(+) A-I      intronic
chr5:175902204(+) A-I      intronic
chr5:175881257(+) A-I      intronic
chr5:175892714(+) A-I      intronic
chr5:175894432(+) A-I      intronic
chr5:175888460(+) A-I      intronic
chr5:175917146(+) A-I      intronic
chr5:175891988(+) A-I      intronic
chr5:175897458(+) A-I      intronic
chr5:175892790(+) A-I      intronic
chr5:175895988(+) A-I      intronic
chr5:175887689(+) A-I      intronic
chr5:175917257(+) A-I      intronic
chr5:175895081(+) A-I      intronic
chr5:175889134(+) A-I      intronic
chr5:175888595(+) A-I      intronic
chr5:175881306(+) A-I      intronic
chr5:175897414(+) A-I      intronic
chr5:175881309(+) A-I      intronic
chr5:175887790(+) A-I      intronic
chr5:175897527(+) A-I      intronic
chr5:175892724(+) A-I      intronic
chr5:175887895(+) A-I      intronic
chr5:175880958(+) A-I      intronic
chr5:175891982(+) A-I      intronic
chr5:175916678(+) A-I      intronic
chr5:175902367(+) A-I      intronic
chr5:175910955(+) A-I      intronic
chr5:175894472(+) A-I      intronic
chr5:175906864(+) A-I      intronic
chr5:175923224(+) A-I      intronic
chr5:175897418(+) A-I      intronic
chr5:175894520(+) A-I      intronic
chr5:175930346(+) A-I      intronic
chr5:175902401(+) A-I      intronic
chr5:175891155(+) A-I      intronic
chr5:175916553(+) A-I      intronic
chr5:175891147(+) A-I      intronic
chr5:175895001(+) A-I      intronic
chr5:175891937(+) A-I      intronic
chr5:175892846(+) A-I      intronic
chr5:175903210(+) A-I      intronic
chr5:175923314(+) A-I      intronic
chr5:175876429(+) A-I      intronic
chr5:175895129(+) A-I      intronic
chr5:175928872(+) A-I      intronic
chr5:175881491(+) A-I      intronic
chr5:175927918(+) A-I      intronic
chr5:175890139(+) A-I      intronic
chr5:175908682(+) A-I      intronic
chr5:175887868(+) A-I      intronic
chr5:175917232(+) A-I      intronic
chr5:175883335(+) A-I      intronic
chr5:175889416(+) A-I      intronic
chr5:175923206(+) A-I      intronic
chr5:175876322(+) A-I      intronic
chr5:175884331(+) A-I      intronic
chr5:175882261(+) A-I      intronic
chr5:175916791(+) A-I      intronic
chr5:175894436(+) A-I      intronic
chr5:175882495(+) A-I      intronic
chr5:175923917(+) A-I      intronic
chr5:175881346(+) A-I      intronic
chr5:175880934(+) A-I      intronic
chr5:175899157(+) A-I      intronic
chr5:175931505(+) A-I      intronic
chr5:175891594(+) A-I      intronic
chr5:175882305(+) A-I      intronic
chr5:175882586(+) A-I      intronic
chr5:175903164(+) A-I      intronic
chr5:175894380(+) A-I      intronic
chr5:175916719(+) A-I      intronic
chr5:175908511(+) A-I      intronic
chr5:175888512(+) A-I      intronic
chr5:175894426(+) A-I      intronic
chr5:175892804(+) A-I      intronic
chr5:175897431(+) A-I      intronic
chr5:175922613(+) A-I      intronic
chr5:175887737(+) A-I      intronic
chr5:175882272(+) A-I      intronic
chr5:175930360(+) A-I      intronic
chr5:175929890(+) A-I      intronic
chr5:175876323(+) A-I      intronic
chr5:175895929(+) A-I      intronic
chr5:175884290(+) A-I      intronic
chr5:175876400(+) A-I      intronic
chr5:175916556(+) A-I      intronic
chr5:175880795(+) A-I      intronic
chr5:175902626(+) A-I      intronic
chr5:175928894(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED FAF2
chr5:175894432(+) A-I intron -    22327324
chr5:175923225(+) A-I intron -    22327324
chr5:175923247(+) A-I intron -    22327324
chr5:175923260(+) A-I intron -    22327324
chr5:175902280(+) A-I intron -    21960545
chr5:175876300(+) A-G intron -    22484847
chr5:175876322(+) A-G intron -    22484847
chr5:175876323(+) A-G intron -    22484847
chr5:175878117(+) A-G intron -    22484847
chr5:175878162(+) A-G intron -    22484847
chr5:175878194(+) A-G intron -    22484847
chr5:175878196(+) A-G intron -    22484847
chr5:175878251(+) A-G intron -    22484847
chr5:175878419(+) T-C intron -    22484847
chr5:175879152(+) A-G intron -    22484847
chr5:175879176(+) A-G intron -    22484847
chr5:175880795(+) A-G intron -    22484847
chr5:175880822(+) C-T intron -    22484847
chr5:175880864(+) A-G intron -    22484847
chr5:175880879(+) A-G intron -    22484847
chr5:175880883(+) C-T intron -    22484847
chr5:175880926(+) A-G intron -    22484847
chr5:175881169(+) A-G intron -    22484847
chr5:175881218(+) A-G intron -    22484847
chr5:175881257(+) A-G intron -    22484847
chr5:175882375(+) A-G intron -    22484847
chr5:175882495(+) A-G intron -    22484847
chr5:175883142(+) A-G intron -    22484847
chr5:175883256(+) A-G intron -    22484847
chr5:175883282(+) A-G intron -    22484847
chr5:175883320(+) A-G intron -    22484847
chr5:175884290(+) A-G intron -    22484847
chr5:175885409(+) C-T intron -    22484847
chr5:175885429(+) G-T intron -    22484847
chr5:175886272(+) C-T intron -    22484847
chr5:175887790(+) A-G intron -    22484847
chr5:175887810(+) A-G intron -    22484847
chr5:175887868(+) A-G intron -    22484847
chr5:175888431(+) A-G intron -    22484847
chr5:175888512(+) A-G intron -    22484847
chr5:175888564(+) A-G intron -    22484847
chr5:175889000(+) A-G intron -    22484847
chr5:175889022(+) A-G intron -    22484847
chr5:175889127(+) A-G intron -    22484847
chr5:175889134(+) A-G intron -    22484847
chr5:175889416(+) A-G intron -    22484847
chr5:175890209(+) A-G intron -    22484847
chr5:175890870(+) A-G intron -    22484847
chr5:175891568(+) A-G intron -    22484847
chr5:175891573(+) A-G intron -    22484847
chr5:175891594(+) A-G intron -    22484847
chr5:175891633(+) A-G intron -    22484847
chr5:175891988(+) A-G intron -    22484847
chr5:175891989(+) A-G intron -    22484847
chr5:175892602(+) A-G intron -    22484847
chr5:175892642(+) A-G intron -    22484847
chr5:175892724(+) A-G intron -    22484847
chr5:175892783(+) A-G intron -    22484847
chr5:175892790(+) A-G intron -    22484847
chr5:175892804(+) A-G intron -    22484847
chr5:175894380(+) A-G intron -    22484847
chr5:175894426(+) A-G intron -    22484847
chr5:175894432(+) A-G intron -    22484847
chr5:175894436(+) A-G intron -    22484847
chr5:175894520(+) A-G intron -    22484847
chr5:175894553(+) A-G intron -    22484847
chr5:175894904(+) A-G intron -    22484847
chr5:175895001(+) A-G intron -    22484847
chr5:175895005(+) A-G intron -    22484847
chr5:175895010(+) A-G intron -    22484847
chr5:175895055(+) A-G intron -    22484847
chr5:175895060(+) A-G intron -    22484847
chr5:175895081(+) A-G intron -    22484847
chr5:175895129(+) A-G intron -    22484847
chr5:175895464(+) A-G intron -    22484847
chr5:175895851(+) A-G intron -    22484847
chr5:175895884(+) A-G intron -    22484847
chr5:175897321(+) A-G intron -    22484847
chr5:175897414(+) A-G intron -    22484847
chr5:175897418(+) A-G intron -    22484847
chr5:175897458(+) A-G intron -    22484847
chr5:175897480(+) A-G intron -    22484847
chr5:175897484(+) A-G intron -    22484847
chr5:175897527(+) A-G intron -    22484847
chr5:175899163(+) A-G intron -    22484847
chr5:175899180(+) A-G intron -    22484847
chr5:175902204(+) A-G intron -    22484847
chr5:175902401(+) A-G intron -    22484847
chr5:175902529(+) A-G intron -    22484847
chr5:175903711(+) A-G intron -    22484847
chr5:175903733(+) A-G intron -    22484847
chr5:175903734(+) A-G intron -    22484847
chr5:175905214(+) A-G intron -    22484847
chr5:175905216(+) A-G intron -    22484847
chr5:175906746(+) A-G intron -    22484847
chr5:175906863(+) A-G intron -    22484847
chr5:175906864(+) A-G intron -    22484847
chr5:175908511(+) A-G intron -    22484847
chr5:175911622(+) A-G intron -    22484847
chr5:175912754(+) A-G intron -    22484847
chr5:175916556(+) A-G intron -    22484847
chr5:175916587(+) A-G intron -    22484847
chr5:175916639(+) A-G intron -    22484847
chr5:175916643(+) A-G intron -    22484847
chr5:175916651(+) A-G intron -    22484847
chr5:175916678(+) A-G intron -    22484847
chr5:175916719(+) A-G intron -    22484847
chr5:175917165(+) A-G intron -    22484847
chr5:175921575(+) A-G intron -    22484847
chr5:175921599(+) A-G intron -    22484847
chr5:175923224(+) A-G intron -    22484847
chr5:175923225(+) A-G intron -    22484847
chr5:175923247(+) A-G intron -    22484847
chr5:175923260(+) A-G intron -    22484847
chr5:175923298(+) A-G intron -    22484847
chr5:175923917(+) A-G intron -    22484847
chr5:175927899(+) A-G intron -    22484847
chr5:175927918(+) A-G intron -    22484847
chr5:175928894(+) A-G intron -    22484847
chr5:175929460(+) A-G intron -    22484847
chr5:175929461(+) A-G intron -    22484847
chr5:175929928(+) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase FAF2
chr5:175875447-175875448(+) m6A CDS//exon//intron       24284625//24981863//22608085
chr5:175880162-175880163(+) m6A exon//intron       24284625//24981863//22608085
chr5:175880201-175880202(+) m6A exon//intron       24284625
chr5:175880650-175880651(+) m6A exon//intron       24209618//24981863
chr5:175880675-175880676(+) m6A exon//intron       24209618//24981863
chr5:175906235-175906236(+) m6A CDS//exon       24209618
chr5:175906249-175906250(+) m6A CDS//exon       24209618
chr5:175913368-175913369(+) m6A CDS//exon       24209618
chr5:175923635-175923636(+) m6A CDS//exon       24981863//27773535
chr5:175923687-175923688(+) m6A exon//intron       24981863//27773535
chr5:175923697-175923698(+) m6A exon//intron       24981863//27773535
chr5:175923968-175923969(+) m6A exon//intron       24284625//24981863
chr5:175925925-175925926(+) m6A CDS//exon       24284625//25456834//24981863//27773535
chr5:175925930-175925931(+) m6A CDS//exon       24284625//25456834//24981863//27773535
chr5:175925944-175925945(+) m6A CDS//exon       24284625//25456834//24981863//27773535
chr5:175927050-175927051(+) m6A CDS       24209618//24981863//27773535
chr5:175933902-175933903(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22608085
chr5:175933934-175933935(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr5:175934011-175934012(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr5:175934035-175934036(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr5:175934093-175934094(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr5:175934121-175934122(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr5:175934234-175934235(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr5:175934240-175934241(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr5:175934283-175934284(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr5:175934337-175934338(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr5:175934374-175934375(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr5:175934446-175934447(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr5:175934564-175934565(+) m6A 3'UTR       24284625
chr5:175936180-175936181(+) m6A 3'UTR       24284625
chr5:175936199-175936200(+) m6A 3'UTR       24284625
chr5:175936325-175936326(+) m6A 3'UTR       24284625//24209618//24981863//26404942//22608085
chr5:175936345-175936346(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr5:175936361-175936362(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr5:175936545-175936546(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr5:175936711-175936712(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr5:175936726-175936727(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr5:175936733-175936734(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr5:175936861-175936862(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr5:175936896-175936897(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr5:175936907-175936908(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr5:175937069-175937070(+) m6A 3'UTR       24981863//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-335-5p
Exosome Serum     18589210
Exosome Saliva     19627513
Exosome B cell line (Raji)|Jurkat-derived T cell line (J77cl20)|Primary dendritic cells     21505438
Exosome Renal cancer cells     21670082
Exosome Breast milk     22211110
Exosome Brain tissue     23382797
Exosome Plasma     23663360
Exosome Serum     25349172
Exosome Blood|Breast milk|Endothelial cells|Seminal fluid     -
Microvesicle Seminal plasma     23539611
Microvesicle Colon cancer cell line (LIM1863)|Fibroblasts|Mesenchymal stem cells     -
Nucleus Neural progenitor cells     21363885
FAF2
Chromatin K562 cells     -
Cytosol HCC cell line (HepG2)     -
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Membrane HCC cell line (HepG2)|K562 cells     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HeLa-S3 cells|K562 cells     -
Ribosome Colon cancer cells     24393600

Related Drug Information:


Resource Symbol Drug Name PubChem
ID
Function
ncDR hsa-miR-335-5p
Tiotixene 941651 Drug resistant
2-trans-n-Buten-1-yl-estradiol 5468334 Drug resistant
2-Methylolivacinium acetate 5458752 Drug sensitive
Berberal 5351462 Drug sensitive
(S)-(+)-Tert-Butyl 2-(4-(4-chlorophenyl)-2,3,9-trimethyl-6H-thieno[3,2-f][1,2,4]triazolo[4,3-a][1,4]diazepin-6-yl)acetate 46907787 Drug resistant
1,3,5-Triazine-2,4-diamine, 1-(3-bromophenyl)-1,6-dihydro-6,6-dimethyl- 407235 Drug sensitive
Sanguilutine pseudobase 371258 Drug sensitive
3,8,13,18,23-Pentaazapentacosane 368998 Drug resistant
Diisopropoxybis(1,4-naphthochinone-2-olato)titanium(IV) 368058 Drug resistant
2-N-Methyl-6-thiaellipticinum iodide 367888 Drug sensitive
Ellipticine 3213 Drug sensitive
Razoxane 30623 Drug sensitive
Acetylstrophanthidin 261075 Drug resistant
Capivasertib 25227436 Drug resistant
(2-Bromoethyl)triphenylphosphonium bromide 22210408 Drug sensitive
3,6-Diamino-10-methylacridinium chloride hydrochloride 15558347 Drug sensitive
19-Formylgeldanamycin-N',N'-pentamethylenehydrazone 135468238 Drug sensitive
Triptolid 118701083 Drug resistant
2,9-Dimethylellipticinium acetate 10472068 Drug sensitive
9-Chloro-2-methylellipticinium acetate, hydrate 10383530 Drug sensitive
Bialamicol 10304 Drug resistant
crambescidin 800 trihydrochloride - Drug resistant
cholestan-5.alpha.-ol-3,6-dione - Drug sensitive
naphtho[1,2-c]quinolizinium, 13-methyl-, chloride - Drug sensitive
thiazolo[3,2-f]phenanthridinium, 3-phenyl- perchlorate - Drug sensitive
2-(4-methylthio-benzylidene)-2-(2-pyridyl)acetonitrile - Drug sensitive
2-methylellpticinium - Drug sensitive
bengamide g - Drug sensitive
pyrazoline derivative - Drug sensitive
Resource Symbol Drug Name PubChem
ID
Function Link  
RNAInter hsa-miR-335-5p
Curcumin 969516 Drug interaction    RC00004487
Ethanol 702 Drug interaction    RC00004470
Oxaliplatine 6857599 Drug interaction    RC00004489
Bisphenol A 6623 Drug interaction    RC00004476
Vincristine 5978 Drug interaction    RC00004475
Prednisolone 5755 Drug interaction    RC00004474
Eloxatine 5310940 Drug interaction    RC00004488
Imatinib 5291 Drug interaction    RC00004473
Diethylstilbestrol 448537 Drug interaction    RC00004486
Trichostatin A 444732 Drug interaction    RC00004485
Paclitaxel 36314 Drug interaction    RC00004481
5-Fluorouracil 3385 Drug interaction    RC00004472
Doxorubicin 31703 Drug interaction    RC00004480
Daunorubicin 30323 Drug interaction    RC00004479
cis-Diaminedichloroplatinum 2767 Drug interaction    RC00004471
N-(3-(5-Chloro-1H-pyrrolo[2,3-b]pyridine-3-carbonyl)-2,4-difluorophenyl)propane-1-sulfonamide 24180719 Drug interaction    RC00004490
2,3,7,8-Tetrachlorodibenzo-P-dioxin 15625 Drug interaction    RC00004478
Arsenic trioxide 14888 Drug interaction    RC00004477
Flavylium 145858 Drug interaction    RC00004484
Leucovorin 135403648 Drug interaction    RC00004491
Celastrol 122724 Drug interaction    RC00004483
6-Methyl-1,3,8-trichlorodibenzofuran 114900 Drug interaction    RC00004482
Asparaginase Escherichia coli - Drug interaction    RC00004492
Neomycin - Drug interaction    RC00004493
1,2,6-Tri-O-galloyl-beta-D-glucopyranose - Drug interaction    RC00004494
Interleukin 13 (IL-13) - Drug interaction    RC00004495
Chemotherapy - Drug interaction    RC00008862
Resource Symbol Drug Name PubChem ID PMID
NoncoRNA hsa-miR-335-5p

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-335-5p
Interactor2: FAF2

Evidence Support:


Weak-Evidence PAR-CLIP
Support Database ViRBase

References:


PMID 22291592 Target region 3'UTR
Source ViRBase Interactor1 expression None
Tissue or cell line EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells Interactor2 expression None
Description We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.

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