Detail Information

Basic Information:


  VIRBase ID:  

HHID00052795

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-9-5p:           FNDC3B:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-9-5p FNDC3B
miRBase
Accession/Entrez ID
MIMAT0000441 64778
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - FAD104//PRO4979//YVTM2421

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR FNDC3B
chr3:172096177(+) A-I      Syn:Ser->Ser
chr3:172096162(+) A-I      Syn:Gly->Gly
chr3:172096151(+) A-I      NonSyn:Ser->Gly
chr3:172096203(+) A-I      NonSyn:Lys->Arg
chr3:172033033(+) A-I      intronic
chr3:172033028(+) A-I      intronic
chr3:171768379(+) A-I      intronic
chr3:171768930(+) A-I      intronic
chr3:171768991(+) A-I      intronic
chr3:171768992(+) A-I      intronic
chr3:171769013(+) A-I      intronic
chr3:171771333(+) A-I      intronic
chr3:171771397(+) A-I      intronic
chr3:171771400(+) A-I      intronic
chr3:171771402(+) A-I      intronic
chr3:171771441(+) A-I      intronic
chr3:171771442(+) A-I      intronic
chr3:171771473(+) A-I      intronic
chr3:171832434(+) A-I      intronic
chr3:171832444(+) A-I      intronic
chr3:171845550(+) A-I      intronic
chr3:172104802(+) A-I      intronic
chr3:172104805(+) A-I      intronic
chr3:172104927(+) A-I      intronic
chr3:172104990(+) A-I      intronic
chr3:172033006(+) A-I      intronic
chr3:172032960(+) A-I      intronic
chr3:172032903(+) A-I      intronic
chr3:171999116(+) A-I      intronic
chr3:171999115(+) A-I      intronic
chr3:171999105(+) A-I      intronic
chr3:171999097(+) A-I      intronic
chr3:171997902(+) A-I      intronic
chr3:171997844(+) A-I      intronic
chr3:171997834(+) A-I      intronic
chr3:171997817(+) A-I      intronic
chr3:171997773(+) A-I      intronic
chr3:171845585(+) A-I      intronic
chr3:171848956(+) A-I      intronic
chr3:171848960(+) A-I      intronic
chr3:171849024(+) A-I      intronic
chr3:171849030(+) A-I      intronic
chr3:171849089(+) A-I      intronic
chr3:171854590(+) A-I      intronic
chr3:171865017(+) A-I      intronic
chr3:171997754(+) A-I      intronic
chr3:171996602(+) A-I      intronic
chr3:171996596(+) A-I      intronic
chr3:171854627(+) A-I      intronic
chr3:171854709(+) A-I      intronic
chr3:171854718(+) A-I      intronic
chr3:171855178(+) A-I      intronic
chr3:171855280(+) A-I      intronic
chr3:171855285(+) A-I      intronic
chr3:171855341(+) A-I      intronic
chr3:171855361(+) A-I      intronic
chr3:171855391(+) A-I      intronic
chr3:171857624(+) A-I      intronic
chr3:171857685(+) A-I      intronic
chr3:171861445(+) A-I      intronic
chr3:171861523(+) A-I      intronic
chr3:171861538(+) A-I      intronic
chr3:171861541(+) A-I      intronic
chr3:171863743(+) A-I      intronic
chr3:171863749(+) A-I      intronic
chr3:172057262(+) A-I      intronic
chr3:172057253(+) A-I      intronic
chr3:172057247(+) A-I      intronic
chr3:172033963(+) A-I      intronic
chr3:172033955(+) A-I      intronic
chr3:171864820(+) A-I      intronic
chr3:171864846(+) A-I      intronic
chr3:171864862(+) A-I      intronic
chr3:171864867(+) A-I      intronic
chr3:171865049(+) A-I      intronic
chr3:171867809(+) A-I      intronic
chr3:171867811(+) A-I      intronic
chr3:171867881(+) A-I      intronic
chr3:171876798(+) A-I      intronic
chr3:171876948(+) A-I      intronic
chr3:171876949(+) A-I      intronic
chr3:171882835(+) A-I      intronic
chr3:171882854(+) A-I      intronic
chr3:171882940(+) A-I      intronic
chr3:171882983(+) A-I      intronic
chr3:171883000(+) A-I      intronic
chr3:171855317(+) A-I      intronic
chr3:171883038(+) A-I      intronic
chr3:171883047(+) A-I      intronic
chr3:171883096(+) A-I      intronic
chr3:171884402(+) A-I      intronic
chr3:172033950(+) A-I      intronic
chr3:172033020(+) A-I      intronic
chr3:172033017(+) A-I      intronic
chr3:171980483(+) A-I      intronic
chr3:171948107(+) A-I      intronic
chr3:171948106(+) A-I      intronic
chr3:171948076(+) A-I      intronic
chr3:171948063(+) A-I      intronic
chr3:171884408(+) A-I      intronic
chr3:171884430(+) A-I      intronic
chr3:171897485(+) A-I      intronic
chr3:172111888(+) A-I      intronic
chr3:172111853(+) A-I      intronic
chr3:172111823(+) A-I      intronic
chr3:171884930(+) A-I      intronic
chr3:171884931(+) A-I      intronic
chr3:171885111(+) A-I      intronic
chr3:171891335(+) A-I      intronic
chr3:171891338(+) A-I      intronic
chr3:171891474(+) A-I      intronic
chr3:171896895(+) A-I      intronic
chr3:171896969(+) A-I      intronic
chr3:171897511(+) A-I      intronic
chr3:171943103(+) A-I      intronic
chr3:171883021(+) A-I      intronic
chr3:172058155(+) A-I      intronic
chr3:172057278(+) A-I      intronic
chr3:172057107(+) A-I      intronic
chr3:172057092(+) A-I      intronic
chr3:172057090(+) A-I      intronic
chr3:172056734(+) A-I      intronic
chr3:172056663(+) A-I      intronic
chr3:172056591(+) A-I      intronic
chr3:172041137(+) A-I      intronic
chr3:172041135(+) A-I      intronic
chr3:171897623(+) A-I      intronic
chr3:172105116(+) A-I      intronic
chr3:172105123(+) A-I      intronic
chr3:171897630(+) A-I      intronic
chr3:171906255(+) A-I      intronic
chr3:171906300(+) A-I      intronic
chr3:171906313(+) A-I      intronic
chr3:171908538(+) A-I      intronic
chr3:171908559(+) A-I      intronic
chr3:171908563(+) A-I      intronic
chr3:171908624(+) A-I      intronic
chr3:171908625(+) A-I      intronic
chr3:171909361(+) A-I      intronic
chr3:172039646(+) A-I      intronic
chr3:172039374(+) A-I      intronic
chr3:172035248(+) A-I      intronic
chr3:172035236(+) A-I      intronic
chr3:171764241(+) A-I      intronic
chr3:172035157(+) A-I      intronic
chr3:172035150(+) A-I      intronic
chr3:172035126(+) A-I      intronic
chr3:171996580(+) A-I      intronic
chr3:171909484(+) A-I      intronic
chr3:171910006(+) A-I      intronic
chr3:171910080(+) A-I      intronic
chr3:171910182(+) A-I      intronic
chr3:171910249(+) A-I      intronic
chr3:171911761(+) A-I      intronic
chr3:172035103(+) A-I      intronic
chr3:171911772(+) A-I      intronic
chr3:171911844(+) A-I      intronic
chr3:171911850(+) A-I      intronic
chr3:171911889(+) A-I      intronic
chr3:171911895(+) A-I      intronic
chr3:172033897(+) A-I      intronic
chr3:171996570(+) A-I      intronic
chr3:171996564(+) A-I      intronic
chr3:171996561(+) A-I      intronic
chr3:171980584(+) A-I      intronic
chr3:172111807(+) A-I      intronic
chr3:172111804(+) A-I      intronic
chr3:172111777(+) A-I      intronic
chr3:172111751(+) A-I      intronic
chr3:172033862(+) A-I      intronic
chr3:172033112(+) A-I      intronic
chr3:171768273(+) A-I      intronic
chr3:172111736(+) A-I      intronic
chr3:172111719(+) A-I      intronic
chr3:172111687(+) A-I      intronic
chr3:172105008(+) A-I      intronic
chr3:172104382(+) A-I      intronic
chr3:172057264(+) A-I      intronic
chr3:171980514(+) A-I      intronic
chr3:171980511(+) A-I      intronic
chr3:171980492(+) A-I      intronic
chr3:171980491(+) A-I      intronic
chr3:172107438(+) A-I      intronic
chr3:172107498(+) A-I      intronic
chr3:172107519(+) A-I      intronic
chr3:172110773(+) A-I      intronic
chr3:172111637(+) A-I      intronic
chr3:172111644(+) A-I      intronic
chr3:172111649(+) A-I      intronic
chr3:172111674(+) A-I      intronic
chr3:171955995(+) A-I      intronic
chr3:171914734(+) A-I      intronic
chr3:171911764(+) A-I      intronic
chr3:171914118(+) A-I      intronic
chr3:171914034(+) A-I      intronic
chr3:171914029(+) A-I      intronic
chr3:171911997(+) A-I      intronic
chr3:171911899(+) A-I      intronic
chr3:172111679(+) A-I      intronic
chr3:172111688(+) A-I      intronic
chr3:172111718(+) A-I      intronic
chr3:172111748(+) A-I      intronic
chr3:172104982(+) A-I      intronic
chr3:172033056(+) A-I      intronic
chr3:172033046(+) A-I      intronic
chr3:172058176(+) A-I      intronic
chr3:172058215(+) A-I      intronic
chr3:172058217(+) A-I      intronic
chr3:172067027(+) A-I      intronic
chr3:172068558(+) A-I      intronic
chr3:172068572(+) A-I      intronic
chr3:172068575(+) A-I      intronic
chr3:172068587(+) A-I      intronic
chr3:172104321(+) A-I      intronic
chr3:172104345(+) A-I      intronic
chr3:172104366(+) A-I      intronic
chr3:172104378(+) A-I      intronic
chr3:172104380(+) A-I      intronic
chr3:172104401(+) A-I      intronic
chr3:172104405(+) A-I      intronic
chr3:172104506(+) A-I      intronic
chr3:171846549(+) A-I      intronic
chr3:172102642(+) A-I      intronic
chr3:171885059(+) A-I      intronic
chr3:171817714(+) A-I      intronic
chr3:171768303(+) A-I      intronic
chr3:171769898(+) A-I      intronic
chr3:171828687(+) A-I      intronic
chr3:171840898(+) A-I      intronic
chr3:171840903(+) A-I      intronic
chr3:171850273(+) A-I      intronic
chr3:172118896(+) A-I      3'UTR
chr3:172118923(+) A-I      3'UTR
chr3:172104381(+) A-I      intronic
chr3:172110660(+) A-I      intronic
chr3:172104349(+) A-I      intronic
chr3:171863703(+) A-I      intronic
chr3:171880981(+) A-I      intronic
chr3:171855244(+) A-I      intronic
chr3:172104944(+) A-I      intronic
chr3:172057287(+) A-I      intronic
chr3:171910243(+) A-I      intronic
chr3:171867632(+) A-I      intronic
chr3:172057259(+) A-I      intronic
chr3:171828739(+) A-I      intronic
chr3:172035156(+) A-I      intronic
chr3:172104411(+) A-I      intronic
chr3:172058276(+) A-I      intronic
chr3:171864843(+) A-I      intronic
chr3:172041183(+) A-I      intronic
chr3:171872279(+) A-I      intronic
chr3:171863769(+) A-I      intronic
chr3:171855348(+) A-I      intronic
chr3:171980620(+) A-I      intronic
chr3:172104421(+) A-I      intronic
chr3:171849022(+) A-I      intronic
chr3:171914709(+) A-I      intronic
chr3:171884446(+) A-I      intronic
chr3:171905493(+) A-I      intronic
chr3:171897126(+) A-I      intronic
chr3:171899540(+) A-I      intronic
chr3:171897438(+) A-I      intronic
chr3:171854626(+) A-I      intronic
chr3:171883052(+) A-I      intronic
chr3:171997914(+) A-I      intronic
chr3:172104278(+) A-I      intronic
chr3:172057188(+) A-I      intronic
chr3:171880849(+) A-I      intronic
chr3:171884424(+) A-I      intronic
chr3:172103622(+) A-I      intronic
chr3:172104385(+) A-I      intronic
chr3:172056666(+) A-I      intronic
chr3:172086807(+) A-I      intronic
chr3:171897423(+) A-I      intronic
chr3:172105026(+) A-I      intronic
chr3:171802143(+) A-I      intronic
chr3:171771557(+) A-I      intronic
chr3:171882933(+) A-I      intronic
chr3:171768354(+) A-I      intronic
chr3:172057233(+) A-I      intronic
chr3:171914091(+) A-I      intronic
chr3:171914718(+) A-I      intronic
chr3:171864985(+) A-I      intronic
chr3:171896979(+) A-I      intronic
chr3:171996597(+) A-I      intronic
chr3:171855296(+) A-I      intronic
chr3:171855260(+) A-I      intronic
chr3:171896888(+) A-I      intronic
chr3:171768205(+) A-I      intronic
chr3:171855342(+) A-I      intronic
chr3:171906296(+) A-I      intronic
chr3:172104876(+) A-I      intronic
chr3:171928274(+) A-I      intronic
chr3:171943974(+) A-I      intronic
chr3:171980662(+) A-I      intronic
chr3:171924328(+) A-I      intronic
chr3:171861446(+) A-I      intronic
chr3:172104766(+) A-I      intronic
chr3:171864886(+) A-I      intronic
chr3:171850300(+) A-I      intronic
chr3:172045401(+) A-I      intronic
chr3:171943943(+) A-I      intronic
chr3:171883022(+) A-I      intronic
chr3:171910092(+) A-I      intronic
chr3:172033927(+) A-I      intronic
chr3:172066967(+) A-I      intronic
chr3:172104846(+) A-I      intronic
chr3:171768974(+) A-I      intronic
chr3:171883034(+) A-I      intronic
chr3:171855189(+) A-I      intronic
chr3:171910063(+) A-I      intronic
chr3:171854692(+) A-I      intronic
chr3:172057206(+) A-I      intronic
chr3:172056743(+) A-I      intronic
chr3:171884928(+) A-I      intronic
chr3:171897486(+) A-I      intronic
chr3:171996674(+) A-I      intronic
chr3:171863684(+) A-I      intronic
chr3:171882921(+) A-I      intronic
chr3:171883009(+) A-I      intronic
chr3:172041180(+) A-I      intronic
chr3:171897434(+) A-I      intronic
chr3:171909318(+) A-I      intronic
chr3:171897439(+) A-I      intronic
chr3:171880986(+) A-I      intronic
chr3:172054681(+) A-I      intronic
chr3:171768357(+) A-I      intronic
chr3:171864920(+) A-I      intronic
chr3:171896875(+) A-I      intronic
chr3:172056692(+) A-I      intronic
chr3:171906299(+) A-I      intronic
chr3:171879806(+) A-I      intronic
chr3:172057200(+) A-I      intronic
chr3:172057242(+) A-I      intronic
chr3:172056607(+) A-I      intronic
chr3:172037908(+) A-I      intronic
chr3:171897562(+) A-I      intronic
chr3:171897032(+) A-I      intronic
chr3:171910174(+) A-I      intronic
chr3:172104912(+) A-I      intronic
chr3:172104873(+) A-I      intronic
chr3:171828768(+) A-I      intronic
chr3:171854651(+) A-I      intronic
chr3:171928271(+) A-I      intronic
chr3:171882889(+) A-I      intronic
chr3:172033891(+) A-I      intronic
chr3:171999122(+) A-I      intronic
chr3:171771542(+) A-I      intronic
chr3:172056691(+) A-I      intronic
chr3:172107445(+) A-I      intronic
chr3:171854657(+) A-I      intronic
chr3:172045217(+) A-I      intronic
chr3:171855284(+) A-I      intronic
chr3:171916893(+) A-I      intronic
chr3:171768192(+) A-I      intronic
chr3:171879867(+) A-I      intronic
chr3:171771556(+) A-I      intronic
chr3:171896869(+) A-I      intronic
chr3:171896991(+) A-I      intronic
chr3:172057255(+) A-I      intronic
chr3:171771482(+) A-I      intronic
chr3:172057197(+) A-I      intronic
chr3:172045271(+) A-I      intronic
chr3:171865022(+) A-I      intronic
chr3:171855325(+) A-I      intronic
chr3:172057232(+) A-I      intronic
chr3:171914892(+) A-I      intronic
chr3:171883035(+) A-I      intronic
chr3:171899508(+) A-I      intronic
chr3:171863704(+) A-I      intronic
chr3:171827036(+) A-I      intronic
chr3:171883039(+) A-I      intronic
chr3:171876816(+) A-I      intronic
chr3:171907461(+) A-I      intronic
chr3:171828782(+) A-I      intronic
chr3:172104373(+) A-I      intronic
chr3:172033867(+) A-I      intronic
chr3:172104947(+) A-I      intronic
chr3:171896952(+) A-I      intronic
chr3:171781919(+) A-I      intronic
chr3:172056788(+) A-I      intronic
chr3:171996590(+) A-I      intronic
chr3:171882878(+) A-I      intronic
chr3:172033859(+) A-I      intronic
chr3:172057175(+) A-I      intronic
chr3:171854649(+) A-I      intronic
chr3:172105088(+) A-I      intronic
chr3:171768319(+) A-I      intronic
chr3:171914860(+) A-I      intronic
chr3:172057112(+) A-I      intronic
chr3:171980576(+) A-I      intronic
chr3:171768904(+) A-I      intronic
chr3:171884447(+) A-I      intronic
chr3:172056656(+) A-I      intronic
chr3:172045376(+) A-I      intronic
chr3:172056787(+) A-I      intronic
chr3:171980622(+) A-I      intronic
chr3:171849019(+) A-I      intronic
chr3:172110683(+) A-I      intronic
chr3:172058350(+) A-I      intronic
chr3:171885075(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED FNDC3B
chr3:172104847(+) A-I intron -    22327324
chr3:172057112(+) A-I intron -    21960545
chr3:172115474(+) A-I intron -    21960545
chr3:171897552(+) A-I intron -    21960545
chr3:172104846(+) A-I intron -    21960545
chr3:171760968(+) G-A intron -    22484847
chr3:171761155(+) A-G intron -    22484847
chr3:171767364(+) G-C intron -    22484847
chr3:171767437(+) T-C intron -    22484847
chr3:171768192(+) A-G intron -    22484847
chr3:171768205(+) A-G intron -    22484847
chr3:171768291(+) A-G intron -    22484847
chr3:171768319(+) A-G intron -    22484847
chr3:171768354(+) A-G intron -    22484847
chr3:171768357(+) A-G intron -    22484847
chr3:171768904(+) A-G intron -    22484847
chr3:171768973(+) A-G intron -    22484847
chr3:171768974(+) A-G intron -    22484847
chr3:171771482(+) A-G intron -    22484847
chr3:171771542(+) A-G intron -    22484847
chr3:171771557(+) A-G intron -    22484847
chr3:171781919(+) A-G intron -    22484847
chr3:171783011(+) A-G intron -    22484847
chr3:171783036(+) T-C intron -    22484847
chr3:171827036(+) A-G intron -    22484847
chr3:171828702(+) A-G intron -    22484847
chr3:171828739(+) A-G intron -    22484847
chr3:171828782(+) A-G intron -    22484847
chr3:171849019(+) A-G intron -    22484847
chr3:171849022(+) A-G intron -    22484847
chr3:171854626(+) A-G intron -    22484847
chr3:171854649(+) A-G intron -    22484847
chr3:171854651(+) A-G intron -    22484847
chr3:171854657(+) A-G intron -    22484847
chr3:171854692(+) A-G intron -    22484847
chr3:171854717(+) A-G intron -    22484847
chr3:171855185(+) A-G intron -    22484847
chr3:171855189(+) A-G intron -    22484847
chr3:171855192(+) A-G intron -    22484847
chr3:171855284(+) A-G intron -    22484847
chr3:171859545(+) A-G intron -    22484847
chr3:171861443(+) A-G intron -    22484847
chr3:171861446(+) A-G intron -    22484847
chr3:171861578(+) A-G intron -    22484847
chr3:171863684(+) A-G intron -    22484847
chr3:171863703(+) A-G intron -    22484847
chr3:171863704(+) A-G intron -    22484847
chr3:171863733(+) A-G intron -    22484847
chr3:171863837(+) A-G intron -    22484847
chr3:171864834(+) A-G intron -    22484847
chr3:171864843(+) A-G intron -    22484847
chr3:171864886(+) A-G intron -    22484847
chr3:171864920(+) A-G intron -    22484847
chr3:171876816(+) A-G intron -    22484847
chr3:171876914(+) T-C intron -    22484847
chr3:171879806(+) A-G intron -    22484847
chr3:171880834(+) A-G intron -    22484847
chr3:171880849(+) A-G intron -    22484847
chr3:171880940(+) A-G intron -    22484847
chr3:171882878(+) A-G intron -    22484847
chr3:171882904(+) A-G intron -    22484847
chr3:171882921(+) A-G intron -    22484847
chr3:171882933(+) A-G intron -    22484847
chr3:171882997(+) A-G intron -    22484847
chr3:171883009(+) A-G intron -    22484847
chr3:171883022(+) A-G intron -    22484847
chr3:171883034(+) A-G intron -    22484847
chr3:171883039(+) A-G intron -    22484847
chr3:171883052(+) A-G intron -    22484847
chr3:171883068(+) A-G intron -    22484847
chr3:171884424(+) A-G intron -    22484847
chr3:171884446(+) A-G intron -    22484847
chr3:171884447(+) A-G intron -    22484847
chr3:171884928(+) A-G intron -    22484847
chr3:171884937(+) G-A intron -    22484847
chr3:171885031(+) A-G intron -    22484847
chr3:171885065(+) A-G intron -    22484847
chr3:171885078(+) C-T intron -    22484847
chr3:171896869(+) A-G intron -    22484847
chr3:171896875(+) A-G intron -    22484847
chr3:171896991(+) A-G intron -    22484847
chr3:171897434(+) A-G intron -    22484847
chr3:171897438(+) A-G intron -    22484847
chr3:171897526(+) A-G intron -    22484847
chr3:171897552(+) A-G intron -    22484847
chr3:171906296(+) A-G intron -    22484847
chr3:171906299(+) A-G intron -    22484847
chr3:171906377(+) G-A intron -    22484847
chr3:171909318(+) A-G intron -    22484847
chr3:171910174(+) A-G intron -    22484847
chr3:171910243(+) A-G intron -    22484847
chr3:171911756(+) A-G intron -    22484847
chr3:171914091(+) A-G intron -    22484847
chr3:171914113(+) A-G intron -    22484847
chr3:171914709(+) A-G intron -    22484847
chr3:171914718(+) A-G intron -    22484847
chr3:171916893(+) A-G intron -    22484847
chr3:171928274(+) A-G intron -    22484847
chr3:171934338(+) G-A intron -    22484847
chr3:171943943(+) A-G intron -    22484847
chr3:171943974(+) A-G intron -    22484847
chr3:171964442(+) T-C intron -    22484847
chr3:171996590(+) A-G intron -    22484847
chr3:171996597(+) A-G intron -    22484847
chr3:171996632(+) G-T intron -    22484847
chr3:171996674(+) A-G intron -    22484847
chr3:171997850(+) A-G intron -    22484847
chr3:172033116(+) A-G intron -    22484847
chr3:172033859(+) A-G intron -    22484847
chr3:172033867(+) A-G intron -    22484847
chr3:172033891(+) A-G intron -    22484847
chr3:172035043(+) A-G intron -    22484847
chr3:172035156(+) A-G intron -    22484847
chr3:172035181(+) A-G intron -    22484847
chr3:172055539(+) A-G intron -    22484847
chr3:172055540(+) A-G intron -    22484847
chr3:172055716(+) A-G intron -    22484847
chr3:172055860(+) A-G intron -    22484847
chr3:172055895(+) A-G intron -    22484847
chr3:172055933(+) G-A intron -    22484847
chr3:172056606(+) A-G intron -    22484847
chr3:172056607(+) A-G intron -    22484847
chr3:172056691(+) A-G intron -    22484847
chr3:172056692(+) A-G intron -    22484847
chr3:172056787(+) A-G intron -    22484847
chr3:172056788(+) A-G intron -    22484847
chr3:172057112(+) A-G intron -    22484847
chr3:172057206(+) A-G intron -    22484847
chr3:172057232(+) A-G intron -    22484847
chr3:172057233(+) A-G intron -    22484847
chr3:172057259(+) A-G intron -    22484847
chr3:172057298(+) A-G intron -    22484847
chr3:172058276(+) A-G intron -    22484847
chr3:172064546(+) G-T intron -    22484847
chr3:172079717(+) T-C intron -    22484847
chr3:172079720(+) T-C intron -    22484847
chr3:172086646(+) C-T intron -    22484847
chr3:172104349(+) A-G intron -    22484847
chr3:172104385(+) A-G intron -    22484847
chr3:172104411(+) A-G intron -    22484847
chr3:172104800(+) A-G intron -    22484847
chr3:172104816(+) A-G intron -    22484847
chr3:172104846(+) A-G intron -    22484847
chr3:172104847(+) A-G intron -    22484847
chr3:172104876(+) A-G intron -    22484847
chr3:172104888(+) A-G intron -    22484847
chr3:172104912(+) A-G intron -    22484847
chr3:172104944(+) A-G intron -    22484847
chr3:172104947(+) A-G intron -    22484847
chr3:172105088(+) A-G intron -    22484847
chr3:172110660(+) A-G intron -    22484847
chr3:172110683(+) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase FNDC3B
chr3:171764717-171764718(+) m6A 5'UTR//intron       24209618
chr3:171965498-171965499(+) m6A CDS//exon       24284625//24981863//26404942//27773535
chr3:171969094-171969095(+) m6A CDS//exon       24284625//24981863//26404942//27773535
chr3:171969122-171969123(+) m6A CDS//exon       24284625//24981863//26404942//27773535
chr3:171969130-171969131(+) m6A CDS//exon       24284625//24981863//26404942//27773535
chr3:171969151-171969152(+) m6A CDS//exon       24284625//24981863//27773535//22575960
chr3:171969279-171969280(+) m6A CDS//exon       24981863//27773535//22575960
chr3:171969322-171969323(+) m6A CDS//exon       24981863//27773535//22575960
chr3:172003745-172003746(+) m6A CDS//exon       24981863//22575960
chr3:172060874-172060875(+) m6A CDS       22575960
chr3:172070627-172070628(+) m6A CDS//exon       24284625
chr3:172070743-172070744(+) m6A CDS       24284625
chr3:172070803-172070804(+) m6A CDS       27773535
chr3:172070862-172070863(+) m6A CDS       27773535
chr3:172080458-172080459(+) m6A CDS       27773535
chr3:172080486-172080487(+) m6A CDS       27773535
chr3:172080595-172080596(+) m6A CDS       26404942
chr3:172080622-172080623(+) m6A CDS       26404942//27773535
chr3:172080628-172080629(+) m6A CDS       26404942//27773535
chr3:172096080-172096081(+) m6A CDS       27773535
chr3:172096107-172096108(+) m6A CDS       27773535
chr3:172096180-172096181(+) m6A CDS       27773535
chr3:172115047-172115048(+) m6A CDS       24981863
chr3:172115128-172115129(+) m6A CDS       24981863//26404942//27773535
chr3:172115180-172115181(+) m6A CDS       24981863//26404942//27773535
chr3:172115770-172115771(+) m6A 3'UTR       26404942
chr3:172115780-172115781(+) m6A 3'UTR       26404942

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-9-5p
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Exosome Hepatocellular carcinoma cell line (HepG2)|Lung epithelial carcinoma cell line (A549)     20615901
Exosome B cell line (Raji)|Jurkat-derived T cell line (J77cl20)     21505438
Exosome Brain tissue     23382797
Exosome Plasma     23663360
Exosome Human mast cell line (HMC-1)     24009880
Exosome Blood|Chronic lymphocytic leukemia cells|Tongue tissue     -
Microvesicle Hepatocellular carcinoma cell line (HepG2)|Lung epithelial carcinoma cell line (A549)     20615901
Microvesicle Cerebrospinal fluid     24797360
Microvesicle Blood|Colon cancer cell line (LIM1863)|Fibroblasts|Mesenchymal stem cells|Urine     -
Mitochondrion Cell line (HEK-293)     22984580
Nucleus Nasopharyngeal carcinoma cells     20498841
FNDC3B
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -
Exosome Blood     -
Membrane HCC cell line (HepG2)     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus Colon cancer cells     24393600
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Related Drug Information:


Resource Symbol Drug Name PubChem
ID
Function
ncDR hsa-miR-9-5p
Succinimide, 3-chloro-N-(p-methoxyphenyl)- 99724 Drug resistant
Iodine Green 9956454 Drug sensitive
7-Epi-10-deacetylbaccatin III 9872117 Drug sensitive
2-Methylthio-1,4-naphthoquinone 96324 Drug resistant
5-Iodo-8-quinolinol 96111 Drug sensitive
Acnistin F 6712173 Drug resistant
Pyrazolo[1,5-b]pyridazine deriv. 97 6539439 Drug resistant
1,1'-Diethyl-2,2'-cyanine chloride 5717105 Drug sensitive
5-Bromo-3-(2-oxo-2-phenylethylidene)-1,3-dihydroindol-2-one 5477132 Drug resistant
Kijanimicin sodium salt 54707591 Drug sensitive
Antineoplastic-643001 5466797 Drug sensitive
Di-p-tolyliodinium bromide 54601177 Drug sensitive
Simvastatin 54454 Drug sensitive
Vorinostat 5311 Drug sensitive
Eupachlorin 5281446 Drug resistant
Spiperone 5265 Drug resistant
Pipamperone 4830 Drug sensitive
Tiazofurin 457954 Drug sensitive
5-Iodo-2-{[(2)-3-phenylprop-2-enoyl]amino}benzamide 45029271 Drug sensitive
Suavedol 442245 Drug sensitive
Triciribine phosphate 43860 Drug resistant
Antibiotic X-14766A 434840 Drug sensitive
Di-n-octyl-secalonsaure A 430141 Drug sensitive
11-Hydroxyusambarine Chlorhydrate 401426 Drug sensitive
2-(1-Propynyl)estradiol 388008 Drug sensitive
Stereoisomer of NSC 674066-O 384359 Drug sensitive
2-Ethylaminoestradiol 384235 Drug sensitive
Sanguilutine pseudobase 371258 Drug sensitive
7-Chloro-1-methyl-phenothiazone 369386 Drug sensitive
Diethoxybis(1,4-naphthochinone-2-olato)titanium(IV) 368297 Drug sensitive
Diisopropoxybis(1,4-naphthochinone-2-olato)titanium(IV) 368058 Drug sensitive
1,2,4,5-Tetrazine, 3,6-bis(1-azetidinyl)- 362170 Drug sensitive
Hexachlorophene 3598 Drug sensitive
2,3-Dimethylbenzo[g]quinoxaline-5,10-dione 353644 Drug sensitive
L-Cysteine, S-[bis(4-methylphenyl)phenylmethyl]- 275979 Drug sensitive
L-Cysteine, S-[(4-chlorophenyl)diphenylmethyl]- 275977 Drug sensitive
9H-Purine, 6-(benzylthio)-9-(2-chloroethyl)- 246230 Drug sensitive
1,2-Benzo-8-(L-alanyl)-3-phenoxazone nitrate salt 24202491 Drug sensitive
1-(2-(Dimethylamino)ethyl)-3-(((2R,4aS,5R,10bS)-5-phenyl-9-(trifluoromethyl)-3,4,4a,5,6,10b-hexahydro-2H-pyrano[3,2-c]quinolin-2-yl)methyl)urea 23634407 Drug sensitive
4-[5-(2-Amino-pyrimidin-4-yl)-4-(4-fluoro-phenyl)-imidazol-1-yl]-cyclohexanol 22464120 Drug resistant
2,2'-Bioxirane 11254 Drug sensitive
Waol A FD-211 10354084 Drug resistant
4-piperidinone, 1-methyl-2,6-bis[(2-nitrophenyl)methylene]- - Drug resistant
1-[(2-cyclohexymethoxy)methyl]-5-ethyl-6-iodouracil - Drug resistant
o-linoleoyl-6-d-glucose - Drug resistant
sphinxolide f - Drug resistant
1,2-benzo-8-(d,l-alanyl)-3-phenoxazone nitrate salt - Drug sensitive
2-(4-(methylsulfonyl)phenyl)-6-p-tolyl-4,5-dihydropyridazin-3(2H)-one - Drug sensitive
2-(naphthalen-2-yl)-1-(3,4,5-trimethoxyphenyl)-1h-imidazole - Drug sensitive
3-piperidinone, 3,5-bis[(3,4-dichlorophenyl)methylene]- - Drug sensitive
benzo[1,2-b:4,5-b']dithiophene-4,8-diol, diacetate - Drug sensitive
E)-1-(4-(quinazolin-4-ylamino)phenyl)-3-(2,4,6-trimethoxyphenyl)prop-2-en-1-one - Drug sensitive
l-cysteine, s-[(4-methylphenyl)diphenylmethyl]- (9ci) - Drug sensitive
Basic Fuchsin - Drug sensitive
Camptothecin Derivative - Drug sensitive
cyclo [n-naphthoyl-d-lys-asn-gln-trp-ala-val-d-ala-his-leu] - Drug sensitive
Resource Symbol Drug Name PubChem
ID
Function Link  
RNAInter hsa-miR-9-5p
Rucaparib phosphate 9931953 Drug interaction    RC00003010
Formaldehyde 712 Drug interaction    RC00002988
Gemcitabine 60750 Drug interaction    RC00003004
Vincristine 5978 Drug interaction    RC00002997
D-Glucose 5793 Drug interaction    RC00002996
Estradiol 5757 Drug interaction    RC00002995
Prednisolone 5755 Drug interaction    RC00002994
Temozolomide 5394 Drug interaction    RC00002993
Sulindac sulfide 5352624 Drug interaction    RC00003009
Eloxatine 5310940 Drug interaction    RC00003008
Imatinib 5291 Drug interaction    RC00002992
Fenretinide 5288209 Drug interaction    RC00003007
Goserelinacetate 47725 Drug interaction    RC00003003
Diethylstilbestrol 448537 Drug interaction    RC00003006
Etoposide 36462 Drug interaction    RC00003002
Paclitaxel 36314 Drug interaction    RC00003001
Doxorubicin 31703 Drug interaction    RC00003000
Daunorubicin 30323 Drug interaction    RC00002999
cis-Diaminedichloroplatinum 2767 Drug interaction    RC00002991
Carmustine 2578 Drug interaction    RC00002990
[5-[2,4-Bis((3S)-3-methylmorpholin-4-yl)pyrido[2,3-d]pyrimidin-7-yl]-2-methoxyphenyl]methanol 25262965 Drug interaction    RC00003011
Bicalutamide 2375 Drug interaction    RC00002989
Arsenic trioxide 14888 Drug interaction    RC00002998
Docetaxel 148124 Drug interaction    RC00003005
Asparaginase Escherichia coli - Drug interaction    RC00003012
TRAIL therapy - Drug interaction    RC00003013
1,2,6-Tri-O-galloyl-beta-D-glucopyranose - Drug interaction    RC00003014
Iron-sulfates and Aluminum-sulfates - Drug interaction    RC00003015

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-9-5p
Interactor2: FNDC3B

Evidence Support:


Weak-Evidence PAR-CLIP
Support Database ViRBase

References:


PMID 22291592 Target region 3'UTR
Source ViRBase Interactor1 expression None
Tissue or cell line EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells Interactor2 expression None
Description We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.

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