Detail Information

Basic Information:


  VIRBase ID:  

HHID00049131

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-215-5p:           TCF4:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-215-5p TCF4
miRBase
Accession/Entrez ID		 MIMAT0000272 6925
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - bHLHb19//CDG2T//E2-2//FECD3//ITF-2//ITF2//PTHS//SEF-2//SEF2//SEF2-1//SEF2-1A//SEF2-1B//SEF2-1D//TCF-4

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-215-5p
rs1201506829 chr1:220117918    C/T
rs1297925192 chr1:220117923    A/C
rs368561403 chr1:220117928    A/C

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR TCF4
chr18:52962640(-) A-I      intronic
chr18:52962639(-) A-I      intronic
chr18:53060495(-) A-I      intronic
chr18:53060532(-) A-I      intronic
chr18:53240207(-) A-I      intronic
chr18:53060467(-) A-I      intronic
chr18:53196224(-) A-I      intronic
chr18:53099434(-) A-I      intronic
chr18:53099316(-) A-I      intronic
chr18:53028026(-) A-I      intronic
chr18:53221744(-) A-I      intronic
chr18:53196287(-) A-I      intronic
chr18:53104589(-) A-I      intronic
chr18:53060465(-) A-I      intronic
chr18:53240159(-) A-I      intronic
chr18:53105229(-) A-I      intronic
chr18:53105228(-) A-I      intronic
chr18:53099412(-) A-I      intronic
chr18:53043252(-) A-I      intronic
chr18:53043251(-) A-I      intronic
chr18:53043250(-) A-I      intronic
chr18:53029497(-) A-I      intronic
chr18:53029494(-) A-I      intronic
chr18:53052836(-) A-I      intronic
chr18:53241648(-) A-I      intronic
chr18:53237892(-) A-I      intronic
chr18:53198441(-) A-I      intronic
chr18:53196322(-) A-I      intronic
chr18:52951462(-) A-I      intronic
chr18:53218363(-) A-I      intronic
chr18:52997535(-) A-I      intronic
chr18:53059057(-) A-I      intronic
chr18:53059585(-) A-I      intronic
chr18:53241622(-) A-I      intronic
chr18:53218449(-) A-I      intronic
chr18:53216339(-) A-I      intronic
chr18:53240245(-) A-I      intronic
chr18:53196297(-) A-I      intronic
chr18:53028055(-) A-I      intronic
chr18:53218379(-) A-I      intronic
chr18:53043430(-) A-I      intronic
chr18:53098608(-) A-I      intronic
chr18:53218313(-) A-I      intronic
chr18:53028070(-) A-I      intronic
chr18:53237891(-) A-I      intronic
chr18:53241729(-) A-I      intronic
chr18:53043367(-) A-I      intronic
chr18:53241720(-) A-I      intronic
chr18:53043516(-) A-I      intronic
chr18:52930756(-) A-I      intronic
chr18:53029495(-) A-I      intronic
chr18:53030778(-) A-I      intronic
chr18:53241688(-) A-I      intronic
chr18:53196292(-) A-I      intronic
chr18:53198378(-) A-I      intronic
chr18:52962101(-) A-I      intronic
chr18:53047251(-) A-I      intronic
chr18:53037529(-) A-I      intronic
chr18:52930799(-) A-I      intronic
chr18:53114154(-) A-I      intronic
chr18:53213379(-) A-I      intronic
chr18:53056245(-) A-I      intronic
chr18:53037459(-) A-I      intronic
chr18:53028251(-) A-I      intronic
chr18:53237942(-) A-I      intronic
chr18:53043377(-) A-I      intronic
chr18:53037384(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED TCF4
chr18:52989299(-) A-I intron -    15258596
chr18:52989360(-) A-I intron -    15258596
chr18:52989420(-) A-I intron -    15258596
chr18:52906132(-) A-G intron -    22484847
chr18:52906135(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase TCF4
chr18:52889698-52889699(-) m6A 3'UTR       27773535
chr18:52890367-52890368(-) m6A 3'UTR       27773535
chr18:52890447-52890448(-) m6A 3'UTR       27773535
chr18:52890458-52890459(-) m6A 3'UTR       27773535
chr18:52890534-52890535(-) m6A 3'UTR       27773535
chr18:52891087-52891088(-) m6A 3'UTR       27773535
chr18:52891461-52891462(-) m6A 3'UTR       24981863//27773535//22608085
chr18:52891487-52891488(-) m6A 3'UTR       24981863//27773535//22608085
chr18:52891538-52891539(-) m6A 3'UTR       24284625//24981863//27773535//22608085
chr18:52891549-52891550(-) m6A 3'UTR       24284625//24981863//27773535//22608085
chr18:52891568-52891569(-) m6A 3'UTR       24284625//24981863//27773535//22608085
chr18:52891710-52891711(-) m6A 3'UTR       27773535
chr18:52891743-52891744(-) m6A 3'UTR       27773535
chr18:52892099-52892100(-) m6A 3'UTR       24981863
chr18:52892105-52892106(-) m6A 3'UTR       24981863
chr18:52894648-52894649(-) m6A 3'UTR       27773535
chr18:52894665-52894666(-) m6A 3'UTR       27773535
chr18:52894726-52894727(-) m6A 3'UTR       24981863//27773535
chr18:52894819-52894820(-) m6A 3'UTR       24981863//27773535
chr18:52894854-52894855(-) m6A 3'UTR       24981863//27773535
chr18:52894929-52894930(-) m6A 3'UTR       24981863//28052920//27773535//22608085
chr18:52894948-52894949(-) m6A 3'UTR       24284625//24981863//28052920//27773535//22608085
chr18:52894977-52894978(-) m6A 3'UTR       24284625//24209618//24981863//28052920//27773535//22608085
chr18:52894990-52894991(-) m6A 3'UTR       24284625//24209618//24981863//28052920//27773535//22608085
chr18:52895080-52895081(-) m6A 3'UTR//exon       24284625//24209618//24981863//28052920//27773535//22608085
chr18:52895088-52895089(-) m6A 3'UTR//exon       24284625//24209618//24981863//28052920//27773535//22608085
chr18:52895150-52895151(-) m6A 3'UTR//exon       24284625//24209618//24981863//28052920//27773535//22608085
chr18:52895185-52895186(-) m6A 3'UTR//exon       24284625//24209618//24981863//28052920//27773535//22608085
chr18:52895195-52895196(-) m6A 3'UTR//exon       24284625//24209618//24981863//28052920//27773535//22608085
chr18:52895225-52895226(-) m6A 3'UTR//exon       24284625//24209618//24981863//28052920//27773535//22608085
chr18:52895232-52895233(-) m6A 3'UTR//exon       24981863//27773535//22608085
chr18:52895464-52895465(-) m6A CDS//exon       24981863//27773535
chr18:52896140-52896141(-) m6A CDS//exon       27773535//27773536
chr18:52896280-52896281(-) Cm CDS//exon       -
chr18:52896289-52896290(-) m6A CDS//exon       24981863//27773535
chr18:52896361-52896362(-) m6A exon//intron       27773535
chr18:52896375-52896376(-) m6A exon//intron       27773535
chr18:52896388-52896389(-) m6A exon//intron       27773535
chr18:52899796-52899797(-) m6A CDS//exon       27773535
chr18:52899814-52899815(-) m6A CDS//exon       27773535
chr18:52899823-52899824(-) m6A CDS//exon       27773535
chr18:52899888-52899889(-) m6A CDS//exon       27773535
chr18:52901789-52901790(-) m6A CDS//exon       27773535
chr18:52901801-52901802(-) m6A CDS//exon       27773535
chr18:52927217-52927218(-) m6A CDS//exon//intron       27773535
chr18:52928728-52928729(-) m6A CDS//exon       27773535
chr18:52937168-52937169(-) m6A CDS//exon       27773535
chr18:52946821-52946822(-) m6A CDS//exon       27773535
chr18:52946846-52946847(-) m6A CDS//exon       27773535
chr18:52969665-52969666(-) m6A CDS//intron       27773535
chr18:52969703-52969704(-) m6A CDS//intron       -
chr18:52969727-52969728(-) m6A 5'UTR//intron       -
chr18:52988971-52988972(-) m6A 5'UTR//exon//intron       -
chr18:52989029-52989030(-) m6A 5'UTR//exon//intron       -
chr18:52989251-52989252(-) m6A 5'UTR//intron       27773535
chr18:52989261-52989262(-) m6A 5'UTR//intron       27773535
chr18:52989298-52989299(-) m6A 5'UTR//intron       27773535
chr18:52989354-52989355(-) m6A 5'UTR//intron       27773535
chr18:52989359-52989360(-) m6A 5'UTR//intron       27773535
chr18:53070743-53070744(-) m6A 5'UTR//CDS//exon       -
chr18:53070784-53070785(-) m6A 5'UTR//intron       -
chr18:53070842-53070843(-) m6A 5'UTR//intron       -
chr18:53256983-53256984(-) m6A 5'UTR//intron       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-215-5p
Exosome HCC cell line (Hep3B|HepG2|PLC/PRF/5)     21721029
Exosome Ovarian follicular fluid     22116803
Exosome Brain tissue     23382797
Exosome Plasma     23663360
Exosome Colon tissue     -
Microvesicle Colon cancer cell line (LIM1863)|Fibroblasts|Mesenchymal stem cells     -
TCF4
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol K562 cells     -
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus Colon cancer cells     24393600
Nucleus K562 cells     -

Related Drug Information:


Resource Symbol Drug Name PubChem
ID		 Function
ncDR hsa-miR-215-5p
Succinimide, 3-chloro-N-(p-methoxyphenyl)- 99724 Drug sensitive
Piperidine, 2-methyl-6-undecyl- 99090 Drug sensitive
5-(5,6-Dimethoxy-1-benzimidazolyl)-3-[[2-(trifluoromethyl)phenyl]methoxy]-2-thiophenecarboxamide 9826308 Drug sensitive
Curcumin 969516 Drug resistant
8-Aminoadenosine 96851 Drug sensitive
Gardenin B 96539 Drug sensitive
[[4-(3-Aminophenyl)-2-pyridyl]methyleneamino]thiourea 9556427 Drug resistant
Acridine Yellow G 8672 Drug sensitive
1,9-Pyrazoloanthrone 8515 Drug sensitive
2-(Benzyloxy)-4-methoxybenzaldehyde 820527 Drug resistant
Temsirolimus 6918289 Drug resistant
Dihydroxydiphenyl-pyridyl methane 69046 Drug resistant
3,6-Diamino-10-methylacridinium chloride 6842 Drug sensitive
3-Hydroxy-3'-nitro-2-naphthanilide 67277 Drug resistant
3-Hydroxy-N-1-naphthyl-2-naphthamide 67241 Drug resistant
4'-Chloro-3-hydroxy-2'-methyl-2-naphthanilide 66718 Drug resistant
Tanespimycin 6505803 Drug sensitive
Everolimus 6442177 Drug resistant
Vicenistatin 6438888 Drug sensitive
Mastoparan 6324633 Drug resistant
3-[4-(1H-Indol-3-yl)-1,3-thiazol-2-yl]-1-methyl-1H-indole 60147979 Drug sensitive
Cisplatin 5702198 Drug resistant
Thiopyrimidine-CH3 5473238 Drug sensitive
7Z-Plakortide H 5472712 Drug sensitive
2-trans-n-Buten-1-yl-estradiol 5468334 Drug resistant
(8R,9S,13S,14S,17S)-13-Methyl-2-[(E)-prop-1-enyl]-6,7,8,9,11,12,14,15,16,17-decahydrocyclopenta[a]phenanthrene-3,17-diol 5468270 Drug resistant
Trimethyl 2-phosphono-3-(2-furan)acrylate 5467926 Drug resistant
p-Chloranilinum[bis(p-chloraniline)dioxalatoruthenate(III)] 54608061 Drug sensitive
Selendale 54601159 Drug resistant
Aspiculamycin hcl 54600418 Drug resistant
Ternatin 5459184 Drug resistant
2-Methoxy-5-[(E)-2-(3,4,5-trimethoxyphenyl)ethenyl]phenol 5386397 Drug resistant
Heliangolide 5384466 Drug sensitive
Xestin A 5352066 Drug sensitive
Hydroxy AT 125 5351254 Drug sensitive
3-[(4-Methoxyphenyl)thio]-2H-isoindole-1-carbaldehyde 53361730 Drug sensitive
5-(6-Methoxybenzimidazol-1-yl)-3-[1-[2-(trifluoromethyl)phenyl]ethoxy]thiophene-2-carboxamide 53338692 Drug sensitive
5-[6-[(1-Methylpiperidin-4-yl)methoxy]benzimidazol-1-yl]-3-[1-[2-(trifluoromethyl)phenyl]ethoxy]thiophene-2-carboxamide 53338689 Drug sensitive
Lovastatin 53232 Drug resistant
Rhamnazin 5320945 Drug resistant
Centaureidin 5315773 Drug resistant
Peridinin 5289155 Drug resistant
Sirolimus 5284616 Drug resistant
Methoxycamptothecin 494089 Drug resistant
Melphalan 460612 Drug resistant
SMA-838 (HCl salt of NSC 188491) 45028430 Drug sensitive
5-Fluoro-2'-deoxyuridyly-(3'->5')-3'-C-ethynylcytosine 45028394 Drug sensitive
Neriifolin 441867 Drug resistant
Calactin 441849 Drug resistant
Ditercalinium dimethanesulfonate dimethanesulfonate 435243 Drug sensitive
Carboplatin 426756 Drug resistant
Diaziquone 42616 Drug resistant
N-[p-[[(2,4-Diamino-6-quinazolinyl)methyl]amino]benzoyl]-L-aspartic acid 419263 Drug sensitive
5-Benzyl-9-hydroxy-5H-indeno[1,2-b]indol-10-one 406582 Drug resistant
Menadione 4055 Drug resistant
3-Acetoxymethyl-1-methyl-5-methoxyindole-4,7-dione 404937 Drug sensitive
1,2 Benzo-8-(1-hydroxy-2-methylamino propane)-3-phenoxazone 400530 Drug resistant
Leflunomide 3899 Drug resistant
1-(4'-Phthalimidopropyl-carbonyl)-5-fluorouracil 388985 Drug sensitive
2-(p-Toluene sulfonyl)-L-glutamic acid phenyl hydrazide 388355 Drug sensitive
Cardenolide 2 388098 Drug resistant
Benzo[1,2-b:5,4-b']dithiophene-4,8-dione, 2-acetyl- 388028 Drug resistant
2-(1-Propynyl)estradiol 388008 Drug resistant
Stereoisomer of NSC 674066-O 384359 Drug sensitive
2-Ethenyl estradiol 381026 Drug resistant
Antineoplastic-655905 375758 Drug resistant
1,2-Dimethyl-phenothiazone 369387 Drug resistant
Idebenone 3686 Drug resistant
(4-Methoxyphenyl)-(3,4,5-trimethoxyphenyl)methanol 368140 Drug sensitive
Miltefosine 3599 Drug sensitive
4-N,N-Bis-2'-cyanoethylaminobenzylidene-4-fluoro aniline 359414 Drug sensitive
Imidazole, 1-(4-chlorophenyl)-4-(4-nitrophenyl)- 355940 Drug resistant
Nordracorubin 341882 Drug sensitive
Zonarol 332671 Drug resistant
Rocaglamide 331783 Drug sensitive
Ellipticine 3213 Drug sensitive
Phomazarin 318385 Drug resistant
SMA-491 (free base of NSC D742838) 302576 Drug sensitive
Phenanthrene-9,10-diimine 2981 Drug resistant
4-[3-[2-Chloro-4-(4,6-diamino-2,2-dimethyl-1,3,5-triazin-1-yl)phenyl]propanoylamino]benzenesulfonyl fluoride;ethanesulfonic acid 276171 Drug sensitive
Tamoxifen 2733526 Drug sensitive
Chelerythrine 2703 Drug sensitive
1-(2-Chloroethyl)-3-(2,6-dioxo-3-piperidyl)-1-nitrosourea 26328 Drug resistant
4-Benzoyl-3H-benzo[f]quinoline-3-carbonitrile 262649 Drug sensitive
Estramustine 259331 Drug resistant
4'-(1H-Benzimidazol-2-yl)1,1biphenyl-4-amine 24205338 Drug sensitive
2[4'Aminobiphenyl]5,6dichlorobenzimidazole 24205088 Drug sensitive
[(4E,6Z,10Z)-20,22-Dihydroxy-13,14,17-trimethoxy-4,8,10,12,16-pentamethyl-3-oxo-2-azabicyclo[16.3.1]docosa-1(21),4,6,10,18(22),19-hexaen-9-yl] carbamate 24199492 Drug sensitive
[(1R,2S,4R,6R,7R,10S,11R,14S,16S)-16-Hydroxy-7,11-dimethyl-6-(6-oxopyran-3-yl)-3-oxapentacyclo[8.8.0.02,4.02,7.011,16]octadecan-14-yl] acetate 23618199 Drug resistant
Benzamide, N-(5-chloro-2-methoxyphenyl)-2-hydroxy-3-nitro- 186169 Drug resistant
Verrucarin A 9,10-epoxide 181390 Drug sensitive
{4-[5-(4-Fluoro-phenyl)-3-(1-methyl-piperidin-4-yl)-3H-imidazol-4-yl]-pyrimidin-2-yl}-phenyl-amine 17892742 Drug sensitive
4H-1,3,2-Benzodioxastannin-4-one, 7-amino-2,2-dibutyl- 16683126 Drug resistant
N-(3-(1-Aziridinyl)propyl)-1,4-butanediamine 160394 Drug resistant
Arsenic trioxide 14888 Drug resistant
Dibromsalan 14839 Drug resistant
8-Chloroadenosine 147569 Drug sensitive
4-Oxo-4-[[(13R)-1,5,9-trimethyl-11,14,15,16-tetraoxatetracyclo[10.3.1.04,13.08,13]hexadecan-10-yl]oxy]butanoic acid 146160078 Drug sensitive
Strospeside, 16-acetate (6CI,7CI,8CI); (3beta,5beta,16beta)-16-(Acetyloxy)-3-[(6-deoxy-3-O-methyl-beta-D-galactopyranosyl)oxy]-14-hydroxycard-20(22)-enolide 146158929 Drug resistant
Edelfosine 1392 Drug sensitive
Eriochrome black t 135465089 Drug resistant
1-Phenazinecarboxylic acid, 6-formyl-4,7,9-trihydroxy-, methyl ester 135457300 Drug resistant
Purpurogallin 135403797 Drug resistant
8-Azaguanine 135403646 Drug resistant
Octadecylphosphocholine 125219 Drug sensitive
Uridine, 2'-deoxy-2'-methylene- 11075548 Drug resistant
Binimetinib 10288191 Drug sensitive
Selumetinib 10127622 Drug sensitive
1,3,6-triphenyl-oxazolo(5,4-d)pyrimidin-2',4(1h,3h)-dion - Drug resistant
1,3-diphenyl-4-(3-phenyl-4,5-dihydro-1H-pyrazol-5-yl)-1H-pyrazole - Drug resistant
1-naphthalenecarboxamide, n,n'-1,8-(octanediyl)bis- - Drug resistant
2,4-diethoxyestra-1,3,5(10)trien-3,17.beta.-diol - Drug resistant
3,5-bis(4-hydroxy-3-methoxystyryl)-N-(4-fluorophenyl)-1H-pyrazole-1-carboxamide - Drug resistant
benzo[1,2-b:4,5-b']dithiophene-4,8-diol, diacetate - Drug resistant
benzo[1,2-b:4,5-b']dithiophene-4,8-diol, dipropionate - Drug resistant
benzo[1,2-b:5,4-b']dithiophene-4,8-dione, 2,5-diacetyl- - Drug resistant
benzo[1,2-c:4,5-c']dipyrrole-1,3,5,7(2h,6h)-tetraimine - Drug resistant
cis-difluorobis(1-phenylhexane-1,3-dionato)titanium(iv) - Drug resistant
mercury, tetrakis(acetato)(2,3,4,5-thiophenetetrayl)tetra- - Drug resistant
naphtho[2,3-d]oxazole-4,9-dione, 2-(1,1-dimethylethyl)- - Drug resistant
phosphinic acid, bis(1-aziridinyl)-, 2-naphthyl ester - Drug resistant
piceatannol, 4,3',5'-trimethyl,1s0 - Drug resistant
pyrazino[1,2-a]benzimidazole, 1,3-diphenyl- - Drug resistant
3-farnesylthiopropionamide - Drug resistant
antineoplastic-647885 - Drug resistant
Camptothecin Derivative - Drug resistant
Chlorozotocin - Drug resistant
crotoxin cd - Drug resistant
Cyanomorpholinodoxorubicin - Drug resistant
potassium arsenite - Drug resistant
protein toxin a 23 - mw approx. 6700 - Drug resistant
protein toxin c 10 - mw approx. 6700 - Drug resistant
1h-1,4,7-triazonine-1,4,7-triacetic acid, octahydro- - Drug sensitive
4-quinazolone, 7-amino-3-(4-methoxyphenyl)-, hydrate - Drug sensitive
5-[2-(4-methoxyphenyl)ethyl]-1,2,3-dimethoxy benzene - Drug sensitive
9h-purine, 2-amino-6-(2,4-dichlorobenzylthio)-9-isobutyl- - Drug sensitive
anthracen-9-one, 10-[(2-methoxyphenyl)methylene]- - Drug sensitive
benzofurazan, 4-nitro-7-(2-pyridinylthio)-, n-oxide - Drug sensitive
Aminopterin Derivative - Drug sensitive
chlorazin - Drug sensitive
Copper(II) complex with quin as a ligand - Drug sensitive
euchrysine - Drug sensitive
methyl (e)-4-methyl-6-(5-bromo-2-hydroxyphenyl)-4-hexenoate - Drug sensitive
secafascaplysin - Drug sensitive
sphinxolide f - Drug sensitive
streptorubrin - Drug sensitive
Resource Symbol Drug Name PubChem
ID		 Function Link  
RNAInter hsa-miR-215-5p
Thymidine-5'-phosphate 9700 Drug interaction    RC00002102
Formaldehyde 712 Drug interaction    RC00002098
Oxaliplatine 6857599 Drug interaction    RC00002110
Capecitabine 60953 Drug interaction    RC00002105
Vincristine 5978 Drug interaction    RC00002101
Eloxatine 5310940 Drug interaction    RC00002109
Trichostatin A 444732 Drug interaction    RC00002108
5-Fluorouracil 3385 Drug interaction    RC00002100
Doxorubicin 31703 Drug interaction    RC00002104
cis-Diaminedichloroplatinum 2767 Drug interaction    RC00002099
Arsenic trioxide 14888 Drug interaction    RC00002103
Leucovorin 135403648 Drug interaction    RC00002111
Raltitrexed 135400182 Drug interaction    RC00002106
Methotrexate 126941 Drug interaction    RC00002107
Chemotherapy - Drug interaction    RC00008836
Resource Symbol Drug Name PubChem ID PMID
NoncoRNA hsa-miR-215-5p
Methyl (9R,10S,11S,12R,19R)-11-acetyloxy-12-ethyl-4-[(13S,15R,17S)-17-ethyl-17-hydroxy-13-methoxycarbonyl-1,11-diazatetracyclo[13.3.1.04,12.05,10]nonadeca-4(12),5,7,9-tetraen-13-yl]-8-formyl-10-hydroxy-5-methoxy-8,16-diazapentacyclo[10.6.1.01,9.02,7.016,19]nonadeca-2,4,6,13-tetraene-10-carboxylate 134755071       26617885

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-215-5p
Interactor2: TCF4

Evidence Support:


Weak-Evidence PAR-CLIP
Support Database ViRBase

References:


PMID 22291592 Target region CDS
Source ViRBase Interactor1 expression None
Tissue or cell line EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells Interactor2 expression None
Description We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.

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