Detail Information

Basic Information:


  VIRBase ID:  

HHID00048055

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-30d-5p:           UBXN4:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-30d-5p UBXN4
miRBase
Accession/Entrez ID
MIMAT0000245 23190
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - erasin//UBXD2//UBXDC1

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-30d-5p
rs1203910650 chr8:134804928    G/A
rs1244539439 chr8:134804930    G/T
rs1441595222 chr8:134804927    C/A
rs1441595222 chr8:134804927    C/T
rs374432132 chr8:134804931    G/A
rs776972352 chr8:134804925    G/A
rs1187386485 chr8:134804934    G/A
rs1373057893 chr8:134804937    TACA/T

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR UBXN4
chr2:136515375(+) A-I      intronic
chr2:136503548(+) A-I      intronic
chr2:136538864(+) A-I      intronic
chr2:136509698(+) A-I      intronic
chr2:136534350(+) A-I      intronic
chr2:136503501(+) A-I      intronic
chr2:136503534(+) A-I      intronic
chr2:136503603(+) A-I      intronic
chr2:136504729(+) A-I      intronic
chr2:136504798(+) A-I      intronic
chr2:136515398(+) A-I      intronic
chr2:136522897(+) A-I      intronic
chr2:136522919(+) A-I      intronic
chr2:136517961(+) A-I      intronic
chr2:136535403(+) A-I      intronic
chr2:136505350(+) A-I      intronic
chr2:136535374(+) A-I      intronic
chr2:136535359(+) A-I      intronic
chr2:136534460(+) A-I      intronic
chr2:136517805(+) A-I      intronic
chr2:136534440(+) A-I      intronic
chr2:136534348(+) A-I      intronic
chr2:136515412(+) A-I      intronic
chr2:136508906(+) A-I      intronic
chr2:136505269(+) A-I      intronic
chr2:136508882(+) A-I      intronic
chr2:136505360(+) A-I      intronic
chr2:136506371(+) A-I      intronic
chr2:136506390(+) A-I      intronic
chr2:136534339(+) A-I      intronic
chr2:136534290(+) A-I      intronic
chr2:136534264(+) A-I      intronic
chr2:136534195(+) A-I      intronic
chr2:136533421(+) A-I      intronic
chr2:136517535(+) A-I      intronic
chr2:136532375(+) A-I      intronic
chr2:136532269(+) A-I      intronic
chr2:136532205(+) A-I      intronic
chr2:136532151(+) A-I      intronic
chr2:136529181(+) A-I      intronic
chr2:136528876(+) A-I      intronic
chr2:136526845(+) A-I      intronic
chr2:136525989(+) A-I      intronic
chr2:136525969(+) A-I      intronic
chr2:136525862(+) A-I      intronic
chr2:136524863(+) A-I      intronic
chr2:136524846(+) A-I      intronic
chr2:136524784(+) A-I      intronic
chr2:136535378(+) A-I      intronic
chr2:136524667(+) A-I      intronic
chr2:136523648(+) A-I      intronic
chr2:136523537(+) A-I      intronic
chr2:136523527(+) A-I      intronic
chr2:136523513(+) A-I      intronic
chr2:136522873(+) A-I      intronic
chr2:136515918(+) A-I      intronic
chr2:136515745(+) A-I      intronic
chr2:136506508(+) A-I      intronic
chr2:136506531(+) A-I      intronic
chr2:136507729(+) A-I      intronic
chr2:136508815(+) A-I      intronic
chr2:136508874(+) A-I      intronic
chr2:136533398(+) A-I      intronic
chr2:136515738(+) A-I      intronic
chr2:136515419(+) A-I      intronic
chr2:136522843(+) A-I      intronic
chr2:136522658(+) A-I      intronic
chr2:136523494(+) A-I      intronic
chr2:136523467(+) A-I      intronic
chr2:136522265(+) A-I      intronic
chr2:136523015(+) A-I      intronic
chr2:136522991(+) A-I      intronic
chr2:136522935(+) A-I      intronic
chr2:136522199(+) A-I      intronic
chr2:136517738(+) A-I      intronic
chr2:136517600(+) A-I      intronic
chr2:136509674(+) A-I      intronic
chr2:136533479(+) A-I      intronic
chr2:136521643(+) A-I      intronic
chr2:136521530(+) A-I      intronic
chr2:136521615(+) A-I      intronic
chr2:136534310(+) A-I      intronic
chr2:136503589(+) A-I      intronic
chr2:136506215(+) A-I      intronic
chr2:136521628(+) A-I      intronic
chr2:136521573(+) A-I      intronic
chr2:136521494(+) A-I      intronic
chr2:136526632(+) A-I      intronic
chr2:136517825(+) A-I      intronic
chr2:136504771(+) A-I      intronic
chr2:136521605(+) A-I      intronic
chr2:136532318(+) A-I      intronic
chr2:136521224(+) A-I      intronic
chr2:136518004(+) A-I      intronic
chr2:136504730(+) A-I      intronic
chr2:136521590(+) A-I      intronic
chr2:136508856(+) A-I      intronic
chr2:136504859(+) A-I      intronic
chr2:136517845(+) A-I      intronic
chr2:136506097(+) A-I      intronic
chr2:136534243(+) A-I      intronic
chr2:136533519(+) A-I      intronic
chr2:136510322(+) A-I      intronic
chr2:136521439(+) A-I      intronic
chr2:136521579(+) A-I      intronic
chr2:136521509(+) A-I      intronic
chr2:136526737(+) A-I      intronic
chr2:136526676(+) A-I      intronic
chr2:136533411(+) A-I      intronic
chr2:136529236(+) A-I      intronic
chr2:136526755(+) A-I      intronic
chr2:136521626(+) A-I      intronic
chr2:136510430(+) A-I      intronic
chr2:136529299(+) A-I      intronic
chr2:136504797(+) A-I      intronic
chr2:136521654(+) A-I      intronic
chr2:136521519(+) A-I      intronic
chr2:136505344(+) A-I      intronic
chr2:136529029(+) A-I      intronic
chr2:136517451(+) A-I      intronic
chr2:136505362(+) A-I      intronic
chr2:136517989(+) A-I      intronic
chr2:136533380(+) A-I      intronic
chr2:136521583(+) A-I      intronic
chr2:136522338(+) A-I      intronic
chr2:136521649(+) A-I      intronic
chr2:136532253(+) A-I      intronic
chr2:136533512(+) A-I      intronic
chr2:136521604(+) A-I      intronic
chr2:136508896(+) A-I      intronic
chr2:136535293(+) A-I      intronic
chr2:136528886(+) A-I      intronic
chr2:136521356(+) A-I      intronic
chr2:136521499(+) A-I      intronic
chr2:136506513(+) A-I      intronic
chr2:136515762(+) A-I      intronic
chr2:136521587(+) A-I      intronic
chr2:136504760(+) A-I      intronic
chr2:136533423(+) A-I      intronic
chr2:136521600(+) A-I      intronic
chr2:136534250(+) A-I      intronic
chr2:136505284(+) A-I      intronic
chr2:136521657(+) A-I      intronic
chr2:136521614(+) A-I      intronic
chr2:136505346(+) A-I      intronic
chr2:136517521(+) A-I      intronic
chr2:136532215(+) A-I      intronic
chr2:136522202(+) A-I      intronic
chr2:136534354(+) A-I      intronic
chr2:136523586(+) A-I      intronic
chr2:136509819(+) A-I      intronic
chr2:136533528(+) A-I      intronic
chr2:136506275(+) A-I      intronic
chr2:136504860(+) A-I      intronic
chr2:136529237(+) A-I      intronic
chr2:136532153(+) A-I      intronic
chr2:136506435(+) A-I      intronic
chr2:136534369(+) A-I      intronic
chr2:136515420(+) A-I      intronic
chr2:136526799(+) A-I      intronic
chr2:136524769(+) A-I      intronic
chr2:136521518(+) A-I      intronic
chr2:136506599(+) A-I      intronic
chr2:136528924(+) A-I      intronic
chr2:136517439(+) A-I      intronic
chr2:136533477(+) A-I      intronic
chr2:136506328(+) A-I      intronic
chr2:136506114(+) A-I      intronic
chr2:136506414(+) A-I      intronic
chr2:136517984(+) A-I      intronic
chr2:136510491(+) A-I      intronic
chr2:136504740(+) A-I      intronic
chr2:136509041(+) A-I      intronic
chr2:136503587(+) A-I      intronic
chr2:136515844(+) A-I      intronic
chr2:136517512(+) A-I      intronic
chr2:136515437(+) A-I      intronic
chr2:136515906(+) A-I      intronic
chr2:136505330(+) A-I      intronic
chr2:136535240(+) A-I      intronic
chr2:136532259(+) A-I      intronic
chr2:136505244(+) A-I      intronic
chr2:136534233(+) A-I      intronic
chr2:136505374(+) A-I      intronic
chr2:136517628(+) A-I      intronic
chr2:136505299(+) A-I      intronic
chr2:136526631(+) A-I      intronic
chr2:136517822(+) A-I      intronic
chr2:136533485(+) A-I      intronic
chr2:136529030(+) A-I      intronic
chr2:136526675(+) A-I      intronic
chr2:136517985(+) A-I      intronic
chr2:136517767(+) A-I      intronic
chr2:136535201(+) A-I      intronic
chr2:136532254(+) A-I      intronic
chr2:136529316(+) A-I      intronic
chr2:136534365(+) A-I      intronic
chr2:136517841(+) A-I      intronic
chr2:136517911(+) A-I      intronic
chr2:136505308(+) A-I      intronic
chr2:136517838(+) A-I      intronic
chr2:136532288(+) A-I      intronic
chr2:136521550(+) A-I      intronic
chr2:136515905(+) A-I      intronic
chr2:136532250(+) A-I      intronic
chr2:136532157(+) A-I      intronic
chr2:136522259(+) A-I      intronic
chr2:136522256(+) A-I      intronic
chr2:136522198(+) A-I      intronic
chr2:136535271(+) A-I      intronic
chr2:136521533(+) A-I      intronic
chr2:136504850(+) A-I      intronic
chr2:136526759(+) A-I      intronic
chr2:136517598(+) A-I      intronic
chr2:136521353(+) A-I      intronic
chr2:136506580(+) A-I      intronic
chr2:136503628(+) A-I      intronic
chr2:136515878(+) A-I      intronic
chr2:136529689(+) A-I      intronic
chr2:136506118(+) A-I      intronic
chr2:136535294(+) A-I      intronic
chr2:136533417(+) A-I      intronic
chr2:136510471(+) A-I      intronic
chr2:136523655(+) A-I      intronic
chr2:136532265(+) A-I      intronic
chr2:136522190(+) A-I      intronic
chr2:136529376(+) A-I      intronic
chr2:136529395(+) A-I      intronic
chr2:136533522(+) A-I      intronic
chr2:136533373(+) A-I      intronic
chr2:136508943(+) A-I      intronic
chr2:136517443(+) A-I      intronic
chr2:136517786(+) A-I      intronic
chr2:136517951(+) A-I      intronic
chr2:136515395(+) A-I      intronic
chr2:136517893(+) A-I      intronic
chr2:136510481(+) A-I      intronic
chr2:136507730(+) A-I      intronic
chr2:136510420(+) A-I      intronic
chr2:136529634(+) A-I      intronic
chr2:136522428(+) A-I      intronic
chr2:136516005(+) A-I      intronic
chr2:136522212(+) A-I      intronic
chr2:136530541(+) A-I      intronic
chr2:136515596(+) A-I      intronic
chr2:136515568(+) A-I      intronic
chr2:136504767(+) A-I      intronic
chr2:136517842(+) A-I      intronic
chr2:136532291(+) A-I      intronic
chr2:136508685(+) A-I      intronic
chr2:136532186(+) A-I      intronic
chr2:136517432(+) A-I      intronic
chr2:136505255(+) A-I      intronic
chr2:136506495(+) A-I      intronic
chr2:136517500(+) A-I      intronic
chr2:136523503(+) A-I      intronic
chr2:136523468(+) A-I      intronic
chr2:136517926(+) A-I      intronic
chr2:136522844(+) A-I      intronic
chr2:136510023(+) A-I      intronic
chr2:136517599(+) A-I      intronic
chr2:136506459(+) A-I      intronic
chr2:136533362(+) A-I      intronic
chr2:136526234(+) A-I      intronic
chr2:136515612(+) A-I      intronic
chr2:136521240(+) A-I      intronic
chr2:136505322(+) A-I      intronic
chr2:136517858(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED UBXN4
chr2:136503525(+) A-I intron -    22327324
chr2:136503587(+) A-I intron -    22327324
chr2:136529197(+) A-I intron -    22327324
chr2:136532146(+) A-I intron -    22327324
chr2:136521356(+) A-I intron -    22028664
chr2:136521439(+) A-I intron -    22028664
chr2:136521493(+) A-I intron -    22028664
chr2:136521494(+) A-I intron -    22028664
chr2:136521499(+) A-I intron -    22028664
chr2:136521509(+) A-I intron -    22028664
chr2:136521519(+) A-I intron -    22028664
chr2:136521530(+) A-I intron -    22028664
chr2:136521533(+) A-I intron -    22028664
chr2:136521573(+) A-I intron -    22028664
chr2:136521579(+) A-I intron -    22028664
chr2:136521583(+) A-I intron -    22028664
chr2:136521587(+) A-I intron -    22028664
chr2:136521590(+) A-I intron -    22028664
chr2:136521600(+) A-I intron -    22028664
chr2:136521604(+) A-I intron -    22028664
chr2:136521605(+) A-I intron -    22028664
chr2:136521614(+) A-I intron -    22028664
chr2:136521615(+) A-I intron -    22028664
chr2:136521626(+) A-I intron -    22028664
chr2:136521628(+) A-I intron -    22028664
chr2:136521643(+) A-I intron -    22028664
chr2:136521644(+) A-I intron -    22028664
chr2:136521649(+) A-I intron -    22028664
chr2:136521654(+) A-I intron -    22028664
chr2:136521657(+) A-I intron -    22028664
chr2:136533411(+) A-I intron -    21960545
chr2:136507729(+) A-I intron -    21960545
chr2:136503467(+) G-T intron -    22484847
chr2:136503587(+) A-G intron -    22484847
chr2:136503613(+) A-G intron -    22484847
chr2:136504730(+) A-G intron -    22484847
chr2:136504734(+) A-G intron -    22484847
chr2:136504750(+) T-C intron -    22484847
chr2:136504797(+) A-G intron -    22484847
chr2:136504850(+) A-G intron -    22484847
chr2:136504860(+) A-G intron -    22484847
chr2:136505291(+) A-G intron -    22484847
chr2:136505299(+) A-G intron -    22484847
chr2:136505308(+) A-G intron -    22484847
chr2:136505330(+) A-G intron -    22484847
chr2:136505344(+) A-G intron -    22484847
chr2:136505346(+) A-G intron -    22484847
chr2:136505362(+) A-G intron -    22484847
chr2:136506234(+) A-G intron -    22484847
chr2:136506414(+) A-G intron -    22484847
chr2:136506418(+) A-G intron -    22484847
chr2:136506459(+) A-G intron -    22484847
chr2:136506513(+) A-G intron -    22484847
chr2:136507730(+) A-G intron -    22484847
chr2:136509869(+) G-A intron -    22484847
chr2:136515395(+) A-G intron -    22484847
chr2:136515397(+) A-G intron -    22484847
chr2:136515437(+) A-G intron -    22484847
chr2:136515762(+) A-G intron -    22484847
chr2:136515844(+) A-G intron -    22484847
chr2:136515878(+) A-G intron -    22484847
chr2:136517432(+) A-G intron -    22484847
chr2:136517433(+) A-G intron -    22484847
chr2:136517439(+) A-G intron -    22484847
chr2:136517443(+) A-G intron -    22484847
chr2:136517451(+) A-G intron -    22484847
chr2:136517558(+) A-G intron -    22484847
chr2:136517738(+) A-G intron -    22484847
chr2:136517767(+) A-G intron -    22484847
chr2:136517841(+) A-G intron -    22484847
chr2:136517842(+) A-G intron -    22484847
chr2:136517845(+) A-G intron -    22484847
chr2:136517926(+) A-G intron -    22484847
chr2:136517984(+) A-G intron -    22484847
chr2:136521224(+) A-G intron -    22484847
chr2:136521533(+) A-G intron -    22484847
chr2:136521550(+) A-G intron -    22484847
chr2:136522190(+) A-G intron -    22484847
chr2:136522212(+) A-G intron -    22484847
chr2:136522844(+) A-G intron -    22484847
chr2:136523468(+) A-G intron -    22484847
chr2:136523503(+) A-G intron -    22484847
chr2:136523586(+) A-G intron -    22484847
chr2:136526675(+) A-G intron -    22484847
chr2:136526782(+) A-G intron -    22484847
chr2:136528924(+) A-G intron -    22484847
chr2:136528990(+) A-G intron -    22484847
chr2:136529197(+) A-G intron -    22484847
chr2:136529316(+) A-G intron -    22484847
chr2:136529376(+) A-G intron -    22484847
chr2:136529395(+) A-G intron -    22484847
chr2:136532146(+) A-G intron -    22484847
chr2:136532157(+) A-G intron -    22484847
chr2:136532189(+) C-G intron -    22484847
chr2:136532254(+) A-G intron -    22484847
chr2:136532255(+) A-G intron -    22484847
chr2:136532268(+) A-G intron -    22484847
chr2:136532272(+) A-G intron -    22484847
chr2:136532288(+) A-G intron -    22484847
chr2:136532291(+) A-G intron -    22484847
chr2:136532318(+) A-G intron -    22484847
chr2:136533373(+) A-G intron -    22484847
chr2:136533477(+) A-G intron -    22484847
chr2:136533479(+) A-G intron -    22484847
chr2:136533512(+) A-G intron -    22484847
chr2:136533522(+) A-G intron -    22484847
chr2:136533528(+) A-G intron -    22484847
chr2:136534243(+) A-G intron -    22484847
chr2:136534263(+) A-G intron -    22484847
chr2:136534276(+) A-G intron -    22484847
chr2:136534354(+) A-G intron -    22484847
chr2:136534365(+) A-G intron -    22484847
chr2:136534369(+) A-G intron -    22484847
chr2:136535179(+) A-G intron -    22484847
chr2:136535201(+) A-G intron -    22484847
chr2:136535202(+) A-G intron -    22484847
chr2:136535292(+) A-G intron -    22484847
chr2:136535293(+) A-G intron -    22484847
chr2:136535294(+) A-G intron -    22484847
chr2:136535295(+) A-G intron -    22484847
chr2:136535394(+) A-G intron -    22484847
chr2:136535744(+) C-A intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase UBXN4
chr2:136499204-136499205(+) m6A 5'UTR       25456834//24981863
chr2:136499279-136499280(+) m6A 5'UTR       25456834//24981863
chr2:136499390-136499391(+) m6A 5'UTR       24284625//24209618//25456834//24981863//27773536//22575960//22608085
chr2:136499452-136499453(+) m6A 5'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr2:136499461-136499462(+) m6A 5'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr2:136500112-136500113(+) m6A exon//intron       -
chr2:136513169-136513170(+) m6A 3'UTR//CDS//exon       27773535
chr2:136513189-136513190(+) m6A 3'UTR//CDS//exon       27773535
chr2:136519448-136519449(+) m6A 3'UTR//CDS//intron       24981863//27773535//22575960//22608085
chr2:136519459-136519460(+) m6A 3'UTR//CDS//intron       24981863//27773535//27371828//22575960//22608085
chr2:136527350-136527351(+) m6A CDS//exon       24981863//27773535//27371828//22608085
chr2:136527389-136527390(+) m6A CDS//exon       24981863//27773535//27371828//22608085
chr2:136528173-136528174(+) m6A CDS//exon       24981863//27773535//27371828//22608085
chr2:136528205-136528206(+) m6A CDS//exon       24981863//27773535//27371828//22608085
chr2:136528213-136528214(+) m1A CDS//exon       26863196
chr2:136528246-136528247(+) m6A CDS//exon       24981863//27773535//22608085
chr2:136528289-136528290(+) m6A CDS//exon       24981863//27773535//22608085
chr2:136530022-136530023(+) m6A CDS//exon       24981863//27773535//22608085
chr2:136530069-136530070(+) m6A CDS//exon       24981863//27773535//22608085
chr2:136537760-136537761(+) m6A CDS//exon       24284625
chr2:136537795-136537796(+) m6A CDS//exon       24284625
chr2:136537803-136537804(+) m6A CDS//exon       24284625
chr2:136537815-136537816(+) m6A CDS//exon       24284625//24209618//27773535
chr2:136537890-136537891(+) m6A CDS//exon       24284625//24209618//24981863//27773535//22608085
chr2:136537916-136537917(+) m6A CDS//exon       24284625//24209618//24981863//27773535//22608085
chr2:136537924-136537925(+) m6A CDS//exon       24284625//24209618//24981863//27773535//22608085
chr2:136540321-136540322(+) m6A CDS//exon       24284625//24209618//24981863//26404942//27773535//22608085
chr2:136540394-136540395(+) m6A CDS//exon       24284625//24209618//24981863//27773535//22608085
chr2:136540419-136540420(+) m6A CDS//exon       24284625//24209618//24981863//27773535//22608085
chr2:136540535-136540536(+) m6A 3'UTR//exon       26404942//27773535
chr2:136541775-136541776(+) m6A 3'UTR//exon       26404942
chr2:136541792-136541793(+) m6A 3'UTR//exon       26404942//27773535
chr2:136541827-136541828(+) m6A 3'UTR//exon       26404942//27773535
chr2:136541834-136541835(+) m6A 3'UTR//exon       26404942//27773535
chr2:136542305-136542306(+) m6A 3'UTR//exon       27773535

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-30d-5p
Cytoplasm Breast adenocarcinoma cells (MCF-7)|Cervical adenocarcinoma cells (HeLa)     24918059
Exosome HCC tissues     30542726
Exosome Hepatocellular carcinoma cell line (HepG2)|Lung epithelial carcinoma cell line (A549)     20615901
Exosome Breast cancer cell line (MCF-7)     20976003
Exosome Renal cancer cells     21670082
Exosome Brain tissue     23382797
Exosome Plasma     23663360
Exosome Human mast cell line (HMC-1)     24009880
Exosome Cerebrospinal fluid     25420022
Exosome Blood|B lymphoblastoid cells|Breast milk|Chronic lymphocytic leukemia cells|Colon tissue|Endothelial cells|Epithelial cells|Kidney tissue|Lymphoma tissue|Mast cells|Seminal fluid|Tongue tissue     -
Extracellular vesicle HEK-293T cells     22849433
Microvesicle Hepatocellular carcinoma cell line (HepG2)|Lung epithelial carcinoma cell line (A549)     20615901
Microvesicle Plasma     23077538
Microvesicle Seminal plasma     23539611
Microvesicle Follicular fluid     23666971
Microvesicle Blood|Colon cancer cell line (LIM1863)|Fibroblasts|Mesenchymal stem cells|Urine     -
Mitochondrion Cell line (HEK-293|HeLa)     22984580
Nucleolus Breast adenocarcinoma cells (MCF-7)|Cervical adenocarcinoma cells (HeLa)     24918059
Nucleus Breast adenocarcinoma cells (MCF-7)|Cervical adenocarcinoma cells (HeLa)     24918059
UBXN4
Chromatin K562 cells     -
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Cytosol HCC cell line (HepG2)|K562 cells     -
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Insoluble cytoplasm K562 cells     -
Membrane HCC cell line (HepG2)     -
Nucleoplasm K562 cells     -
Nucleus Nasopharyngeal carcinoma cells     20498841
Ribosome Colon cancer cells     24393600

Related Drug Information:


Resource Symbol Drug Name PubChem
ID
Function
ncDR hsa-miR-30d-5p
Midostaurin 9829523 Drug resistant
Herveline O 5459269 Drug sensitive
Cuspidatin C 5459164 Drug sensitive
2,7-Bis(methoxycarbonylmethyl)-10-methylphenothiazine 384444 Drug sensitive
2-Acetyl-1,2-dihydroellipticine 376328 Drug resistant
Antimycin A3 245869 Drug sensitive
5-Hydroxy-3-phenylpyrano[3,2-c]chromen-2(5H)-one 24205741 Drug sensitive
4,5-Bis(4-methoxyphenyl)-1,5-dihydroimidazol-2-one 231112 Drug sensitive
Kinetin riboside 20345 Drug resistant
Astrazon Orange R 135747272 Drug sensitive
Cladospirone bisepoxide 10316810 Drug sensitive
(3Z,4R)-4-Hydroxy-3-[2-[(1S,3R)-3-[2-[(1S,3S,3'R,4S)-1-hydroxy-4,6,6-trimethylspiro[2,5-dioxabicyclo[2.2.2]octane-3,6'-oxane]-3'-yl]ethyl]-2,2-dimethyl-6-methylidenecyclohexyl]ethylidene]oxolan-2-one 101206903 Drug sensitive
antineoplastic-d655481 - Drug resistant
4-[4-(3-Methoxy-phenyl)-piperazin-1 -yl]-5H-pyrrolo[3,2-d]pyrimidine - Drug sensitive
4-morpholinecarbodithioic acid, antimony complex - Drug sensitive
7-n,n-dimethylamino brefeldin a hydrochloride - Drug sensitive
E)-1-(4-(quinazolin-4-ylamino)phenyl)-3-(2,4,6-trimethoxyphenyl)prop-2-en-1-one - Drug sensitive
isatin dr - Drug sensitive
tetra(isobutenyl)antimony bromide - Drug sensitive
Resource Symbol Drug Name PubChem
ID
Function Link  
RNAInter hsa-miR-30d-5p
Gemcitabine 60750 Drug interaction    RC00001621
Sunitinib 5329102 Drug interaction    RC00001626
Eloxatine 5310940 Drug interaction    RC00001625
Trichostatin A 444732 Drug interaction    RC00001624
Paroxetine 43815 Drug interaction    RC00001620
Etoposide 36462 Drug interaction    RC00001619
5-Fluorouracil 3385 Drug interaction    RC00001617
Doxorubicin 31703 Drug interaction    RC00001618
cis-Diaminedichloroplatinum 2767 Drug interaction    RC00001616
Verapamil 2520 Drug interaction    RC00001615
N-(3-(5-Chloro-1H-pyrrolo[2,3-b]pyridine-3-carbonyl)-2,4-difluorophenyl)propane-1-sulfonamide 24180719 Drug interaction    RC00001627
Bicalutamide 2375 Drug interaction    RC00001614
Docetaxel 148124 Drug interaction    RC00001623
1,2,6-Tri-O-galloyl-beta-D-glucopyranose - Drug interaction    RC00001628
Trastuzumab - Drug interaction    RC00001629
Resource Symbol Drug Name PubChem ID PMID
NoncoRNA hsa-miR-30d-5p
N-(3-(5-Chloro-1H-pyrrolo[2,3-b]pyridine-3-carbonyl)-2,4-difluorophenyl)propane-1-sulfonamide 24180719       26456124

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-30d-5p
Interactor2: UBXN4

Evidence Support:


Weak-Evidence HITS-CLIP
Support Database ViRBase

References:


PMID 22473208 Target region None
Source ViRBase Interactor1 expression None
Tissue or cell line Jijoye cells Interactor2 expression None
Description Our HITS-CLIP data yield 1185 human 3'UTRs targeted by members of the miR-17~92 cluster in Jijoye cells. Comparison to the 1664 3'UTRs targeted by EBV miRNAs reveals 740 shared genes (44% of EBV targets and 62% of miR-17~92 targets; Figure 6B and Supplementary Table 7). Thus, EBV miRNAs co-target a majority of miR-17~92 regulated mRNAs, which are assigned to a variety of pathways, most notably regulating transcription, apoptosis, and the cell cycle (Figure 6C). Similarly, other abundant immunologically relevant miRNAs, 142-3p and miR-155, co-target with EBV miRNAs a large fraction of their Ago-bound 3'UTRs, representing ~60% of the targets for each of these host miRNAs (Supplementary Figure 5).

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