Detail Information

Basic Information:


  VIRBase ID:  

HHID00048025

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-30d-5p:           GARRE1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-30d-5p GARRE1
miRBase
Accession/Entrez ID
MIMAT0000245 9710
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - KIAA0355

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-30d-5p
rs1203910650 chr8:134804928    G/A
rs1244539439 chr8:134804930    G/T
rs1441595222 chr8:134804927    C/A
rs1441595222 chr8:134804927    C/T
rs374432132 chr8:134804931    G/A
rs776972352 chr8:134804925    G/A
rs1187386485 chr8:134804934    G/A
rs1373057893 chr8:134804937    TACA/T

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR GARRE1
chr19:34748372(+) A-I      intronic
chr19:34841977(+) A-I      intronic
chr19:34748369(+) A-I      intronic
chr19:34762685(+) A-I      intronic
chr19:34837954(+) A-I      intronic
chr19:34837893(+) A-I      intronic
chr19:34748342(+) A-I      intronic
chr19:34763854(+) A-I      intronic
chr19:34762659(+) A-I      intronic
chr19:34762673(+) A-I      intronic
chr19:34789479(+) A-I      intronic
chr19:34789508(+) A-I      intronic
chr19:34748323(+) A-I      intronic
chr19:34792339(+) A-I      intronic
chr19:34792347(+) A-I      intronic
chr19:34819303(+) A-I      intronic
chr19:34762674(+) A-I      intronic
chr19:34837892(+) A-I      intronic
chr19:34836647(+) A-I      intronic
chr19:34819343(+) A-I      intronic
chr19:34776298(+) A-I      intronic
chr19:34776352(+) A-I      intronic
chr19:34827093(+) A-I      intronic
chr19:34784442(+) A-I      intronic
chr19:34780227(+) A-I      intronic
chr19:34780245(+) A-I      intronic
chr19:34780253(+) A-I      intronic
chr19:34783848(+) A-I      intronic
chr19:34836600(+) A-I      intronic
chr19:34836529(+) A-I      intronic
chr19:34836523(+) A-I      intronic
chr19:34834302(+) A-I      intronic
chr19:34834297(+) A-I      intronic
chr19:34834287(+) A-I      intronic
chr19:34834267(+) A-I      intronic
chr19:34783849(+) A-I      intronic
chr19:34777591(+) A-I      intronic
chr19:34746827(+) A-I      intronic
chr19:34747337(+) A-I      intronic
chr19:34834201(+) A-I      intronic
chr19:34780442(+) A-I      intronic
chr19:34780443(+) A-I      intronic
chr19:34780514(+) A-I      intronic
chr19:34750048(+) A-I      intronic
chr19:34837578(+) A-I      intronic
chr19:34763243(+) A-I      intronic
chr19:34834195(+) A-I      intronic
chr19:34827105(+) A-I      intronic
chr19:34763233(+) A-I      intronic
chr19:34827098(+) A-I      intronic
chr19:34783850(+) A-I      intronic
chr19:34783875(+) A-I      intronic
chr19:34783876(+) A-I      intronic
chr19:34763284(+) A-I      intronic
chr19:34789442(+) A-I      intronic
chr19:34789464(+) A-I      intronic
chr19:34789475(+) A-I      intronic
chr19:34759588(+) A-I      intronic
chr19:34759592(+) A-I      intronic
chr19:34770285(+) A-I      intronic
chr19:34759594(+) A-I      intronic
chr19:34759610(+) A-I      intronic
chr19:34750049(+) A-I      intronic
chr19:34750038(+) A-I      intronic
chr19:34750018(+) A-I      intronic
chr19:34750014(+) A-I      intronic
chr19:34750006(+) A-I      intronic
chr19:34749993(+) A-I      intronic
chr19:34842024(+) A-I      intronic
chr19:34747336(+) A-I      intronic
chr19:34769836(+) A-I      intronic
chr19:34767042(+) A-I      intronic
chr19:34763845(+) A-I      intronic
chr19:34820833(+) A-I      intronic
chr19:34821739(+) A-I      intronic
chr19:34821874(+) A-I      intronic
chr19:34822003(+) A-I      intronic
chr19:34825516(+) A-I      intronic
chr19:34825549(+) A-I      intronic
chr19:34825554(+) A-I      intronic
chr19:34825561(+) A-I      intronic
chr19:34825569(+) A-I      intronic
chr19:34825794(+) A-I      intronic
chr19:34758104(+) A-I      intronic
chr19:34758028(+) A-I      intronic
chr19:34757979(+) A-I      intronic
chr19:34757922(+) A-I      intronic
chr19:34757914(+) A-I      intronic
chr19:34757895(+) A-I      intronic
chr19:34754566(+) A-I      intronic
chr19:34754564(+) A-I      intronic
chr19:34754447(+) A-I      intronic
chr19:34754406(+) A-I      intronic
chr19:34754402(+) A-I      intronic
chr19:34754067(+) A-I      intronic
chr19:34754039(+) A-I      intronic
chr19:34753979(+) A-I      intronic
chr19:34753956(+) A-I      intronic
chr19:34753872(+) A-I      intronic
chr19:34753029(+) A-I      intronic
chr19:34752944(+) A-I      intronic
chr19:34749871(+) A-I      intronic
chr19:34749660(+) A-I      intronic
chr19:34749640(+) A-I      intronic
chr19:34749616(+) A-I      intronic
chr19:34749580(+) A-I      intronic
chr19:34749502(+) A-I      intronic
chr19:34748347(+) A-I      intronic
chr19:34748346(+) A-I      intronic
chr19:34762185(+) A-I      intronic
chr19:34762427(+) A-I      intronic
chr19:34762583(+) A-I      intronic
chr19:34763269(+) A-I      intronic
chr19:34763270(+) A-I      intronic
chr19:34763278(+) A-I      intronic
chr19:34763324(+) A-I      intronic
chr19:34763342(+) A-I      intronic
chr19:34763838(+) A-I      intronic
chr19:34763876(+) A-I      intronic
chr19:34748343(+) A-I      intronic
chr19:34748336(+) A-I      intronic
chr19:34748329(+) A-I      intronic
chr19:34747278(+) A-I      intronic
chr19:34763139(+) A-I      intronic
chr19:34825806(+) A-I      intronic
chr19:34825836(+) A-I      intronic
chr19:34826592(+) A-I      intronic
chr19:34826597(+) A-I      intronic
chr19:34826611(+) A-I      intronic
chr19:34826620(+) A-I      intronic
chr19:34826674(+) A-I      intronic
chr19:34829163(+) A-I      intronic
chr19:34829179(+) A-I      intronic
chr19:34829212(+) A-I      intronic
chr19:34834109(+) A-I      intronic
chr19:34834118(+) A-I      intronic
chr19:34834126(+) A-I      intronic
chr19:34834189(+) A-I      intronic
chr19:34834312(+) A-I      intronic
chr19:34834527(+) A-I      intronic
chr19:34834661(+) A-I      intronic
chr19:34834677(+) A-I      intronic
chr19:34834697(+) A-I      intronic
chr19:34834707(+) A-I      intronic
chr19:34834709(+) A-I      intronic
chr19:34835335(+) A-I      intronic
chr19:34835381(+) A-I      intronic
chr19:34835402(+) A-I      intronic
chr19:34835437(+) A-I      intronic
chr19:34835441(+) A-I      intronic
chr19:34835446(+) A-I      intronic
chr19:34835448(+) A-I      intronic
chr19:34835601(+) A-I      intronic
chr19:34835621(+) A-I      intronic
chr19:34835696(+) A-I      intronic
chr19:34836461(+) A-I      intronic
chr19:34820516(+) A-I      intronic
chr19:34836538(+) A-I      intronic
chr19:34836560(+) A-I      intronic
chr19:34836584(+) A-I      intronic
chr19:34836612(+) A-I      intronic
chr19:34836633(+) A-I      intronic
chr19:34836668(+) A-I      intronic
chr19:34758879(+) A-I      intronic
chr19:34759602(+) A-I      intronic
chr19:34763965(+) A-I      intronic
chr19:34764022(+) A-I      intronic
chr19:34764032(+) A-I      intronic
chr19:34766966(+) A-I      intronic
chr19:34767078(+) A-I      intronic
chr19:34767088(+) A-I      intronic
chr19:34769153(+) A-I      intronic
chr19:34769172(+) A-I      intronic
chr19:34769173(+) A-I      intronic
chr19:34769228(+) A-I      intronic
chr19:34769251(+) A-I      intronic
chr19:34769255(+) A-I      intronic
chr19:34769762(+) A-I      intronic
chr19:34769842(+) A-I      intronic
chr19:34770769(+) A-I      intronic
chr19:34770872(+) A-I      intronic
chr19:34772057(+) A-I      intronic
chr19:34773161(+) A-I      intronic
chr19:34775887(+) A-I      intronic
chr19:34775894(+) A-I      intronic
chr19:34776272(+) A-I      intronic
chr19:34776277(+) A-I      intronic
chr19:34776318(+) A-I      intronic
chr19:34776372(+) A-I      intronic
chr19:34776375(+) A-I      intronic
chr19:34776408(+) A-I      intronic
chr19:34777933(+) A-I      intronic
chr19:34779861(+) A-I      intronic
chr19:34779932(+) A-I      intronic
chr19:34779980(+) A-I      intronic
chr19:34779989(+) A-I      intronic
chr19:34780018(+) A-I      intronic
chr19:34780167(+) A-I      intronic
chr19:34758349(+) A-I      intronic
chr19:34759604(+) A-I      intronic
chr19:34762179(+) A-I      intronic
chr19:34820634(+) A-I      intronic
chr19:34820649(+) A-I      intronic
chr19:34820650(+) A-I      intronic
chr19:34820653(+) A-I      intronic
chr19:34837602(+) A-I      intronic
chr19:34837621(+) A-I      intronic
chr19:34837622(+) A-I      intronic
chr19:34838174(+) A-I      intronic
chr19:34838197(+) A-I      intronic
chr19:34838354(+) A-I      intronic
chr19:34838395(+) A-I      intronic
chr19:34841612(+) A-I      intronic
chr19:34841671(+) A-I      intronic
chr19:34841677(+) A-I      intronic
chr19:34841693(+) A-I      intronic
chr19:34842013(+) A-I      intronic
chr19:34842059(+) A-I      intronic
chr19:34842064(+) A-I      intronic
chr19:34843277(+) A-I      intronic
chr19:34820662(+) A-I      intronic
chr19:34820747(+) A-I      intronic
chr19:34780191(+) A-I      intronic
chr19:34780217(+) A-I      intronic
chr19:34780518(+) A-I      intronic
chr19:34780522(+) A-I      intronic
chr19:34780535(+) A-I      intronic
chr19:34781060(+) A-I      intronic
chr19:34781140(+) A-I      intronic
chr19:34781426(+) A-I      intronic
chr19:34781905(+) A-I      intronic
chr19:34781937(+) A-I      intronic
chr19:34782889(+) A-I      intronic
chr19:34782947(+) A-I      intronic
chr19:34782954(+) A-I      intronic
chr19:34783002(+) A-I      intronic
chr19:34783512(+) A-I      intronic
chr19:34783520(+) A-I      intronic
chr19:34783531(+) A-I      intronic
chr19:34784413(+) A-I      intronic
chr19:34785179(+) A-I      intronic
chr19:34785262(+) A-I      intronic
chr19:34785270(+) A-I      intronic
chr19:34786474(+) A-I      intronic
chr19:34786485(+) A-I      intronic
chr19:34786656(+) A-I      intronic
chr19:34786657(+) A-I      intronic
chr19:34787758(+) A-I      intronic
chr19:34788021(+) A-I      intronic
chr19:34788095(+) A-I      intronic
chr19:34789101(+) A-I      intronic
chr19:34789111(+) A-I      intronic
chr19:34789225(+) A-I      intronic
chr19:34789268(+) A-I      intronic
chr19:34789326(+) A-I      intronic
chr19:34789327(+) A-I      intronic
chr19:34789411(+) A-I      intronic
chr19:34789440(+) A-I      intronic
chr19:34789447(+) A-I      intronic
chr19:34789458(+) A-I      intronic
chr19:34789471(+) A-I      intronic
chr19:34792106(+) A-I      intronic
chr19:34793261(+) A-I      intronic
chr19:34793299(+) A-I      intronic
chr19:34793302(+) A-I      intronic
chr19:34793327(+) A-I      intronic
chr19:34793427(+) A-I      intronic
chr19:34793461(+) A-I      intronic
chr19:34795447(+) A-I      intronic
chr19:34800480(+) A-I      intronic
chr19:34800529(+) A-I      intronic
chr19:34804810(+) A-I      intronic
chr19:34809827(+) A-I      intronic
chr19:34813216(+) A-I      intronic
chr19:34813232(+) A-I      intronic
chr19:34813267(+) A-I      intronic
chr19:34813337(+) A-I      intronic
chr19:34818014(+) A-I      intronic
chr19:34819275(+) A-I      intronic
chr19:34819655(+) A-I      intronic
chr19:34819679(+) A-I      intronic
chr19:34819693(+) A-I      intronic
chr19:34819747(+) A-I      intronic
chr19:34820805(+) A-I      intronic
chr19:34820531(+) A-I      intronic
chr19:34820539(+) A-I      intronic
chr19:34829295(+) A-I      intronic
chr19:34758024(+) A-I      intronic
chr19:34834570(+) A-I      intronic
chr19:34746786(+) A-I      intronic
chr19:34786608(+) A-I      intronic
chr19:34775099(+) A-I      intronic
chr19:34821583(+) A-I      intronic
chr19:34760624(+) A-I      intronic
chr19:34819276(+) A-I      intronic
chr19:34786688(+) A-I      intronic
chr19:34788050(+) A-I      intronic
chr19:34749952(+) A-I      intronic
chr19:34753270(+) A-I      intronic
chr19:34763889(+) A-I      intronic
chr19:34822066(+) A-I      intronic
chr19:34838094(+) A-I      intronic
chr19:34776341(+) A-I      intronic
chr19:34827158(+) A-I      intronic
chr19:34769766(+) A-I      intronic
chr19:34758163(+) A-I      intronic
chr19:34779846(+) A-I      intronic
chr19:34792344(+) A-I      intronic
chr19:34819259(+) A-I      intronic
chr19:34841729(+) A-I      intronic
chr19:34836469(+) A-I      intronic
chr19:34782796(+) A-I      intronic
chr19:34746881(+) A-I      intronic
chr19:34819540(+) A-I      intronic
chr19:34769288(+) A-I      intronic
chr19:34827041(+) A-I      intronic
chr19:34834592(+) A-I      intronic
chr19:34758332(+) A-I      intronic
chr19:34819313(+) A-I      intronic
chr19:34820836(+) A-I      intronic
chr19:34769742(+) A-I      intronic
chr19:34789145(+) A-I      intronic
chr19:34826495(+) A-I      intronic
chr19:34746876(+) A-I      intronic
chr19:34825484(+) A-I      intronic
chr19:34836682(+) A-I      intronic
chr19:34758161(+) A-I      intronic
chr19:34785782(+) A-I      intronic
chr19:34781912(+) A-I      intronic
chr19:34789269(+) A-I      intronic
chr19:34776421(+) A-I      intronic
chr19:34763183(+) A-I      intronic
chr19:34786561(+) A-I      intronic
chr19:34841604(+) A-I      intronic
chr19:34754639(+) A-I      intronic
chr19:34776608(+) A-I      intronic
chr19:34763933(+) A-I      intronic
chr19:34829259(+) A-I      intronic
chr19:34836580(+) A-I      intronic
chr19:34787788(+) A-I      intronic
chr19:34788032(+) A-I      intronic
chr19:34834654(+) A-I      intronic
chr19:34775122(+) A-I      intronic
chr19:34753934(+) A-I      intronic
chr19:34819287(+) A-I      intronic
chr19:34825709(+) A-I      intronic
chr19:34785048(+) A-I      intronic
chr19:34789244(+) A-I      intronic
chr19:34747283(+) A-I      intronic
chr19:34835510(+) A-I      intronic
chr19:34775841(+) A-I      intronic
chr19:34840843(+) A-I      intronic
chr19:34786650(+) A-I      intronic
chr19:34746924(+) A-I      intronic
chr19:34819354(+) A-I      intronic
chr19:34776363(+) A-I      intronic
chr19:34825483(+) A-I      intronic
chr19:34752990(+) A-I      intronic
chr19:34785143(+) A-I      intronic
chr19:34838346(+) A-I      intronic
chr19:34752909(+) A-I      intronic
chr19:34769791(+) A-I      intronic
chr19:34757943(+) A-I      intronic
chr19:34748840(+) A-I      intronic
chr19:34763862(+) A-I      intronic
chr19:34749677(+) A-I      intronic
chr19:34841842(+) A-I      intronic
chr19:34784580(+) A-I      intronic
chr19:34784485(+) A-I      intronic
chr19:34819355(+) A-I      intronic
chr19:34759611(+) A-I      intronic
chr19:34792186(+) A-I      intronic
chr19:34841762(+) A-I      intronic
chr19:34834198(+) A-I      intronic
chr19:34769694(+) A-I      intronic
chr19:34775901(+) A-I      intronic
chr19:34777613(+) A-I      intronic
chr19:34783542(+) A-I      intronic
chr19:34777937(+) A-I      intronic
chr19:34789170(+) A-I      intronic
chr19:34842046(+) A-I      intronic
chr19:34834523(+) A-I      intronic
chr19:34841942(+) A-I      intronic
chr19:34749900(+) A-I      intronic
chr19:34781055(+) A-I      intronic
chr19:34837615(+) A-I      intronic
chr19:34753841(+) A-I      intronic
chr19:34792316(+) A-I      intronic
chr19:34746851(+) A-I      intronic
chr19:34819773(+) A-I      intronic
chr19:34772126(+) A-I      intronic
chr19:34842025(+) A-I      intronic
chr19:34789263(+) A-I      intronic
chr19:34772585(+) A-I      intronic
chr19:34821785(+) A-I      intronic
chr19:34753092(+) A-I      intronic
chr19:34834672(+) A-I      intronic
chr19:34837909(+) A-I      intronic
chr19:34787819(+) A-I      intronic
chr19:34834553(+) A-I      intronic
chr19:34749683(+) A-I      intronic
chr19:34769117(+) A-I      intronic
chr19:34760568(+) A-I      intronic
chr19:34752950(+) A-I      intronic
chr19:34775100(+) A-I      intronic
chr19:34835241(+) A-I      intronic
chr19:34822848(+) A-I      intronic
chr19:34753972(+) A-I      intronic
chr19:34762510(+) A-I      intronic
chr19:34758012(+) A-I      intronic
chr19:34763853(+) A-I      intronic
chr19:34785633(+) A-I      intronic
chr19:34774912(+) A-I      intronic
chr19:34795422(+) A-I      intronic
chr19:34760537(+) A-I      intronic
chr19:34747005(+) A-I      intronic
chr19:34825812(+) A-I      intronic
chr19:34746892(+) A-I      intronic
chr19:34792376(+) A-I      intronic
chr19:34838367(+) A-I      intronic
chr19:34813557(+) A-I      intronic
chr19:34759680(+) A-I      intronic
chr19:34780482(+) A-I      intronic
chr19:34750019(+) A-I      intronic
chr19:34822637(+) A-I      intronic
chr19:34821944(+) A-I      intronic
chr19:34775304(+) A-I      intronic
chr19:34825327(+) A-I      intronic
chr19:34819346(+) A-I      intronic
chr19:34820823(+) A-I      intronic
chr19:34837580(+) A-I      intronic
chr19:34827101(+) A-I      intronic
chr19:34781951(+) A-I      intronic
chr19:34834181(+) A-I      intronic
chr19:34758143(+) A-I      intronic
chr19:34838400(+) A-I      intronic
chr19:34781434(+) A-I      intronic
chr19:34834542(+) A-I      intronic
chr19:34749574(+) A-I      intronic
chr19:34836005(+) A-I      intronic
chr19:34749950(+) A-I      intronic
chr19:34819613(+) A-I      intronic
chr19:34777331(+) A-I      intronic
chr19:34785076(+) A-I      intronic
chr19:34772155(+) A-I      intronic
chr19:34783801(+) A-I      intronic
chr19:34836453(+) A-I      intronic
chr19:34785635(+) A-I      intronic
chr19:34765153(+) A-I      intronic
chr19:34748912(+) A-I      intronic
chr19:34835873(+) A-I      intronic
chr19:34777536(+) A-I      intronic
chr19:34836484(+) A-I      intronic
chr19:34749044(+) A-I      intronic
chr19:34758050(+) A-I      intronic
chr19:34836539(+) A-I      intronic
chr19:34840952(+) A-I      intronic
chr19:34760601(+) A-I      intronic
chr19:34834588(+) A-I      intronic
chr19:34838058(+) A-I      intronic
chr19:34747006(+) A-I      intronic
chr19:34760607(+) A-I      intronic
chr19:34792147(+) A-I      intronic
chr19:34827062(+) A-I      intronic
chr19:34762338(+) A-I      intronic
chr19:34836524(+) A-I      intronic
chr19:34835906(+) A-I      intronic
chr19:34813130(+) A-I      intronic
chr19:34749784(+) A-I      intronic
chr19:34776278(+) A-I      intronic
chr19:34783691(+) A-I      intronic
chr19:34749750(+) A-I      intronic
chr19:34773186(+) A-I      intronic
chr19:34819638(+) A-I      intronic
chr19:34819710(+) A-I      intronic
chr19:34763899(+) A-I      intronic
chr19:34835708(+) A-I      intronic
chr19:34753410(+) A-I      intronic
chr19:34837941(+) A-I      intronic
chr19:34834631(+) A-I      intronic
chr19:34754627(+) A-I      intronic
chr19:34842882(+) A-I      intronic
chr19:34785225(+) A-I      intronic
chr19:34781226(+) A-I      intronic
chr19:34765163(+) A-I      intronic
chr19:34757974(+) A-I      intronic
chr19:34762637(+) A-I      intronic
chr19:34769258(+) A-I      intronic
chr19:34819593(+) A-I      intronic
chr19:34843186(+) A-I      intronic
chr19:34825868(+) A-I      intronic
chr19:34819756(+) A-I      intronic
chr19:34774942(+) A-I      intronic
chr19:34826454(+) A-I      intronic
chr19:34754038(+) A-I      intronic
chr19:34757511(+) A-I      intronic
chr19:34822749(+) A-I      intronic
chr19:34789179(+) A-I      intronic
chr19:34789159(+) A-I      intronic
chr19:34785291(+) A-I      intronic
chr19:34748307(+) A-I      intronic
chr19:34789190(+) A-I      intronic
chr19:34819678(+) A-I      intronic
chr19:34837958(+) A-I      intronic
chr19:34786535(+) A-I      intronic
chr19:34757464(+) A-I      intronic
chr19:34792105(+) A-I      intronic
chr19:34813141(+) A-I      intronic
chr19:34747263(+) A-I      intronic
chr19:34772143(+) A-I      intronic
chr19:34758311(+) A-I      intronic
chr19:34835905(+) A-I      intronic
chr19:34765189(+) A-I      intronic
chr19:34834152(+) A-I      intronic
chr19:34785765(+) A-I      intronic
chr19:34838044(+) A-I      intronic
chr19:34785051(+) A-I      intronic
chr19:34785100(+) A-I      intronic
chr19:34842049(+) A-I      intronic
chr19:34754011(+) A-I      intronic
chr19:34841983(+) A-I      intronic
chr19:34841918(+) A-I      intronic
chr19:34838093(+) A-I      intronic
chr19:34762315(+) A-I      intronic
chr19:34749998(+) A-I      intronic
chr19:34825697(+) A-I      intronic
chr19:34769719(+) A-I      intronic
chr19:34770229(+) A-I      intronic
chr19:34834754(+) A-I      intronic
chr19:34826975(+) A-I      intronic
chr19:34841567(+) A-I      intronic
chr19:34834550(+) A-I      intronic
chr19:34834215(+) A-I      intronic
chr19:34776675(+) A-I      intronic
chr19:34779781(+) A-I      intronic
chr19:34835718(+) A-I      intronic
chr19:34757913(+) A-I      intronic
chr19:34775084(+) A-I      intronic
chr19:34746832(+) A-I      intronic
chr19:34757987(+) A-I      intronic
chr19:34837683(+) A-I      intronic
chr19:34785182(+) A-I      intronic
chr19:34834235(+) A-I      intronic
chr19:34837929(+) A-I      intronic
chr19:34746909(+) A-I      intronic
chr19:34836659(+) A-I      intronic
chr19:34842036(+) A-I      intronic
chr19:34792976(+) A-I      intronic
chr19:34835511(+) A-I      intronic
chr19:34841984(+) A-I      intronic
chr19:34834139(+) A-I      intronic
chr19:34758796(+) A-I      intronic
chr19:34820825(+) A-I      intronic
chr19:34762202(+) A-I      intronic
chr19:34747018(+) A-I      intronic
chr19:34819775(+) A-I      intronic
chr19:34820824(+) A-I      intronic
chr19:34835509(+) A-I      intronic
chr19:34784491(+) A-I      intronic
chr19:34819696(+) A-I      intronic

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-30d-5p
Cytoplasm Breast adenocarcinoma cells (MCF-7)|Cervical adenocarcinoma cells (HeLa)     24918059
Exosome HCC tissues     30542726
Exosome Hepatocellular carcinoma cell line (HepG2)|Lung epithelial carcinoma cell line (A549)     20615901
Exosome Breast cancer cell line (MCF-7)     20976003
Exosome Renal cancer cells     21670082
Exosome Brain tissue     23382797
Exosome Plasma     23663360
Exosome Human mast cell line (HMC-1)     24009880
Exosome Cerebrospinal fluid     25420022
Exosome Blood|B lymphoblastoid cells|Breast milk|Chronic lymphocytic leukemia cells|Colon tissue|Endothelial cells|Epithelial cells|Kidney tissue|Lymphoma tissue|Mast cells|Seminal fluid|Tongue tissue     -
Extracellular vesicle HEK-293T cells     22849433
Microvesicle Hepatocellular carcinoma cell line (HepG2)|Lung epithelial carcinoma cell line (A549)     20615901
Microvesicle Plasma     23077538
Microvesicle Seminal plasma     23539611
Microvesicle Follicular fluid     23666971
Microvesicle Blood|Colon cancer cell line (LIM1863)|Fibroblasts|Mesenchymal stem cells|Urine     -
Mitochondrion Cell line (HEK-293|HeLa)     22984580
Nucleolus Breast adenocarcinoma cells (MCF-7)|Cervical adenocarcinoma cells (HeLa)     24918059
Nucleus Breast adenocarcinoma cells (MCF-7)|Cervical adenocarcinoma cells (HeLa)     24918059
GARRE1
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HeLa-S3 cells     -
Exosome Blood     -
Membrane HCC cell line (HepG2)     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HeLa-S3 cells     -

Related Drug Information:


Resource Symbol Drug Name PubChem
ID
Function
ncDR hsa-miR-30d-5p
Midostaurin 9829523 Drug resistant
Herveline O 5459269 Drug sensitive
Cuspidatin C 5459164 Drug sensitive
2,7-Bis(methoxycarbonylmethyl)-10-methylphenothiazine 384444 Drug sensitive
2-Acetyl-1,2-dihydroellipticine 376328 Drug resistant
Antimycin A3 245869 Drug sensitive
5-Hydroxy-3-phenylpyrano[3,2-c]chromen-2(5H)-one 24205741 Drug sensitive
4,5-Bis(4-methoxyphenyl)-1,5-dihydroimidazol-2-one 231112 Drug sensitive
Kinetin riboside 20345 Drug resistant
Astrazon Orange R 135747272 Drug sensitive
Cladospirone bisepoxide 10316810 Drug sensitive
(3Z,4R)-4-Hydroxy-3-[2-[(1S,3R)-3-[2-[(1S,3S,3'R,4S)-1-hydroxy-4,6,6-trimethylspiro[2,5-dioxabicyclo[2.2.2]octane-3,6'-oxane]-3'-yl]ethyl]-2,2-dimethyl-6-methylidenecyclohexyl]ethylidene]oxolan-2-one 101206903 Drug sensitive
antineoplastic-d655481 - Drug resistant
4-[4-(3-Methoxy-phenyl)-piperazin-1 -yl]-5H-pyrrolo[3,2-d]pyrimidine - Drug sensitive
4-morpholinecarbodithioic acid, antimony complex - Drug sensitive
7-n,n-dimethylamino brefeldin a hydrochloride - Drug sensitive
E)-1-(4-(quinazolin-4-ylamino)phenyl)-3-(2,4,6-trimethoxyphenyl)prop-2-en-1-one - Drug sensitive
isatin dr - Drug sensitive
tetra(isobutenyl)antimony bromide - Drug sensitive
Resource Symbol Drug Name PubChem
ID
Function Link  
RNAInter hsa-miR-30d-5p
Gemcitabine 60750 Drug interaction    RC00001621
Sunitinib 5329102 Drug interaction    RC00001626
Eloxatine 5310940 Drug interaction    RC00001625
Trichostatin A 444732 Drug interaction    RC00001624
Paroxetine 43815 Drug interaction    RC00001620
Etoposide 36462 Drug interaction    RC00001619
5-Fluorouracil 3385 Drug interaction    RC00001617
Doxorubicin 31703 Drug interaction    RC00001618
cis-Diaminedichloroplatinum 2767 Drug interaction    RC00001616
Verapamil 2520 Drug interaction    RC00001615
N-(3-(5-Chloro-1H-pyrrolo[2,3-b]pyridine-3-carbonyl)-2,4-difluorophenyl)propane-1-sulfonamide 24180719 Drug interaction    RC00001627
Bicalutamide 2375 Drug interaction    RC00001614
Docetaxel 148124 Drug interaction    RC00001623
1,2,6-Tri-O-galloyl-beta-D-glucopyranose - Drug interaction    RC00001628
Trastuzumab - Drug interaction    RC00001629
Resource Symbol Drug Name PubChem ID PMID
NoncoRNA hsa-miR-30d-5p
N-(3-(5-Chloro-1H-pyrrolo[2,3-b]pyridine-3-carbonyl)-2,4-difluorophenyl)propane-1-sulfonamide 24180719       26456124

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-30d-5p
Interactor2: GARRE1

Evidence Support:


Weak-Evidence PAR-CLIP
Support Database ViRBase

References:


PMID 22291592 Target region 3'UTR
Source ViRBase Interactor1 expression None
Tissue or cell line EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells Interactor2 expression None
Description We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.

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