Detail Information

Basic Information:


  VIRBase ID:  

HHID00044893

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-30a-3p:           NUFIP2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-30a-3p NUFIP2
miRBase
Accession/Entrez ID
MIMAT0000088 57532
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - 182-FIP//82-FIP//FIP-82//PIG1

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-30a-3p
rs149150037 chr6:71403567    G/A
rs149150037 chr6:71403567    G/C
rs370184894 chr6:71403566    C/A
rs370184894 chr6:71403566    C/T
rs552541514 chr6:71403558    C/G
rs745605208 chr6:71403563    ATCCG/A
rs746505574 chr6:71403557    G/A
rs746505574 chr6:71403557    G/T
rs746965145 chr6:71403554    GCT/G
rs750918072 chr6:71403564    T/C
rs765735953 chr6:71403560    A/T
rs770865356 chr6:71403559    A/AC
rs776574456 chr6:71403560    A/AAGCTGGAGT
rs368070339 chr6:71403571    G/A
rs769702885 chr6:71403570    TG/T
rs775921090 chr6:71403574    AGCC/A
rs781617967 chr6:71403573    A/T

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR NUFIP2
chr17:27616130(-) A-I      intronic
chr17:27606806(-) A-I      intronic
chr17:27606836(-) A-I      intronic
chr17:27606839(-) A-I      intronic
chr17:27586437(-) A-I      3'UTR
chr17:27606803(-) A-I      intronic
chr17:27616005(-) A-I      intronic
chr17:27615996(-) A-I      intronic
chr17:27608458(-) A-I      intronic
chr17:27607592(-) A-I      intronic
chr17:27599008(-) A-I      intronic
chr17:27602177(-) A-I      intronic
chr17:27603559(-) A-I      intronic
chr17:27603572(-) A-I      intronic
chr17:27606787(-) A-I      intronic
chr17:27586450(-) A-I      3'UTR
chr17:27586458(-) A-I      3'UTR
chr17:27606804(-) A-I      intronic
chr17:27617430(-) A-I      intronic
chr17:27606862(-) A-I      intronic
chr17:27606899(-) A-I      intronic
chr17:27606913(-) A-I      intronic
chr17:27607029(-) A-I      intronic
chr17:27607034(-) A-I      intronic
chr17:27597739(-) A-I      intronic
chr17:27597723(-) A-I      intronic
chr17:27607618(-) A-I      intronic
chr17:27595820(-) A-I      intronic
chr17:27595814(-) A-I      intronic
chr17:27595206(-) A-I      intronic
chr17:27595087(-) A-I      intronic
chr17:27595086(-) A-I      intronic
chr17:27595081(-) A-I      intronic
chr17:27595055(-) A-I      intronic
chr17:27595049(-) A-I      intronic
chr17:27595028(-) A-I      intronic
chr17:27595008(-) A-I      intronic
chr17:27606779(-) A-I      intronic
chr17:27607647(-) A-I      intronic
chr17:27607652(-) A-I      intronic
chr17:27607810(-) A-I      intronic
chr17:27607941(-) A-I      intronic
chr17:27608069(-) A-I      intronic
chr17:27615268(-) A-I      intronic
chr17:27597750(-) A-I      intronic
chr17:27597780(-) A-I      intronic
chr17:27598331(-) A-I      intronic
chr17:27598363(-) A-I      intronic
chr17:27598375(-) A-I      intronic
chr17:27598433(-) A-I      intronic
chr17:27598446(-) A-I      intronic
chr17:27598482(-) A-I      intronic
chr17:27598492(-) A-I      intronic
chr17:27598508(-) A-I      intronic
chr17:27598574(-) A-I      intronic
chr17:27599453(-) A-I      intronic
chr17:27599454(-) A-I      intronic
chr17:27599463(-) A-I      intronic
chr17:27599509(-) A-I      intronic
chr17:27599547(-) A-I      intronic
chr17:27600441(-) A-I      intronic
chr17:27603520(-) A-I      intronic
chr17:27601284(-) A-I      intronic
chr17:27601308(-) A-I      intronic
chr17:27601472(-) A-I      intronic
chr17:27602081(-) A-I      intronic
chr17:27602842(-) A-I      intronic
chr17:27602934(-) A-I      intronic
chr17:27602946(-) A-I      intronic
chr17:27602960(-) A-I      intronic
chr17:27602963(-) A-I      intronic
chr17:27602964(-) A-I      intronic
chr17:27602999(-) A-I      intronic
chr17:27603466(-) A-I      intronic
chr17:27603475(-) A-I      intronic
chr17:27603519(-) A-I      intronic
chr17:27604335(-) A-I      intronic
chr17:27604814(-) A-I      intronic
chr17:27604922(-) A-I      intronic
chr17:27606634(-) A-I      intronic
chr17:27606635(-) A-I      intronic
chr17:27617605(-) A-I      intronic
chr17:27617469(-) A-I      intronic
chr17:27617456(-) A-I      intronic
chr17:27617431(-) A-I      intronic
chr17:27616977(-) A-I      intronic
chr17:27615226(-) A-I      intronic
chr17:27615200(-) A-I      intronic
chr17:27615194(-) A-I      intronic
chr17:27615177(-) A-I      intronic
chr17:27615168(-) A-I      intronic
chr17:27615167(-) A-I      intronic
chr17:27615076(-) A-I      intronic
chr17:27611702(-) A-I      intronic
chr17:27611641(-) A-I      intronic
chr17:27611624(-) A-I      intronic
chr17:27611569(-) A-I      intronic
chr17:27611558(-) A-I      intronic
chr17:27610574(-) A-I      intronic
chr17:27616502(-) A-I      intronic
chr17:27616488(-) A-I      intronic
chr17:27610573(-) A-I      intronic
chr17:27610551(-) A-I      intronic
chr17:27616381(-) A-I      intronic
chr17:27609520(-) A-I      intronic
chr17:27608043(-) A-I      intronic
chr17:27609484(-) A-I      intronic
chr17:27609431(-) A-I      intronic
chr17:27609356(-) A-I      intronic
chr17:27609330(-) A-I      intronic
chr17:27609053(-) A-I      intronic
chr17:27609030(-) A-I      intronic
chr17:27608983(-) A-I      intronic
chr17:27608978(-) A-I      intronic
chr17:27608934(-) A-I      intronic
chr17:27608931(-) A-I      intronic
chr17:27608911(-) A-I      intronic
chr17:27608264(-) A-I      intronic
chr17:27608239(-) A-I      intronic
chr17:27607054(-) A-I      intronic
chr17:27607108(-) A-I      intronic
chr17:27607109(-) A-I      intronic
chr17:27607115(-) A-I      intronic
chr17:27607604(-) A-I      intronic
chr17:27610459(-) A-I      intronic
chr17:27595022(-) A-I      intronic
chr17:27601405(-) A-I      intronic
chr17:27601391(-) A-I      intronic
chr17:27611661(-) A-I      intronic
chr17:27607964(-) A-I      intronic
chr17:27617070(-) A-I      intronic
chr17:27601333(-) A-I      intronic
chr17:27611677(-) A-I      intronic
chr17:27604882(-) A-I      intronic
chr17:27615089(-) A-I      intronic
chr17:27602176(-) A-I      intronic
chr17:27607878(-) A-I      intronic
chr17:27609564(-) A-I      intronic
chr17:27601441(-) A-I      intronic
chr17:27606822(-) A-I      intronic
chr17:27609404(-) A-I      intronic
chr17:27604766(-) A-I      intronic
chr17:27602152(-) A-I      intronic
chr17:27595013(-) A-I      intronic
chr17:27598455(-) A-I      intronic
chr17:27616158(-) A-I      intronic
chr17:27615924(-) A-I      intronic
chr17:27608977(-) A-I      intronic
chr17:27598906(-) A-I      intronic
chr17:27616137(-) A-I      intronic
chr17:27607488(-) A-I      intronic
chr17:27604139(-) A-I      intronic
chr17:27604883(-) A-I      intronic
chr17:27604310(-) A-I      intronic
chr17:27606643(-) A-I      intronic
chr17:27617130(-) A-I      intronic
chr17:27594050(-) A-I      intronic
chr17:27604302(-) A-I      intronic
chr17:27601492(-) A-I      intronic
chr17:27603479(-) A-I      intronic
chr17:27608921(-) A-I      intronic
chr17:27606919(-) A-I      intronic
chr17:27617004(-) A-I      intronic
chr17:27615221(-) A-I      intronic
chr17:27615926(-) A-I      intronic
chr17:27599530(-) A-I      intronic
chr17:27603032(-) A-I      intronic
chr17:27602333(-) A-I      intronic
chr17:27602207(-) A-I      intronic
chr17:27616039(-) A-I      intronic
chr17:27599423(-) A-I      intronic
chr17:27604973(-) A-I      intronic
chr17:27603515(-) A-I      intronic
chr17:27598472(-) A-I      intronic
chr17:27617071(-) A-I      intronic
chr17:27599553(-) A-I      intronic
chr17:27604801(-) A-I      intronic
chr17:27608474(-) A-I      intronic
chr17:27598473(-) A-I      intronic
chr17:27607010(-) A-I      intronic
chr17:27616089(-) A-I      intronic
chr17:27600196(-) A-I      intronic
chr17:27608096(-) A-I      intronic
chr17:27617557(-) A-I      intronic
chr17:27607063(-) A-I      intronic
chr17:27599356(-) A-I      intronic
chr17:27599355(-) A-I      intronic
chr17:27609031(-) A-I      intronic
chr17:27606847(-) A-I      intronic
chr17:27602179(-) A-I      intronic
chr17:27616096(-) A-I      intronic
chr17:27604851(-) A-I      intronic
chr17:27602195(-) A-I      intronic
chr17:27603489(-) A-I      intronic
chr17:27607497(-) A-I      intronic
chr17:27601408(-) A-I      intronic
chr17:27602820(-) A-I      intronic
chr17:27598389(-) A-I      intronic
chr17:27616133(-) A-I      intronic
chr17:27617447(-) A-I      intronic
chr17:27607812(-) A-I      intronic
chr17:27615336(-) A-I      intronic
chr17:27607660(-) A-I      intronic
chr17:27607747(-) A-I      intronic
chr17:27606975(-) A-I      intronic
chr17:27595176(-) A-I      intronic
chr17:27616988(-) A-I      intronic
chr17:27609483(-) A-I      intronic
chr17:27606997(-) A-I      intronic
chr17:27596595(-) A-I      intronic
chr17:27607528(-) A-I      intronic
chr17:27599397(-) A-I      intronic
chr17:27607024(-) A-I      intronic
chr17:27610391(-) A-I      intronic
chr17:27601316(-) A-I      intronic
chr17:27605536(-) A-I      intronic
chr17:27612116(-) A-I      intronic
chr17:27616999(-) A-I      intronic
chr17:27608062(-) A-I      intronic
chr17:27603470(-) A-I      intronic
chr17:27617429(-) A-I      intronic
chr17:27607670(-) A-I      intronic
chr17:27615330(-) A-I      intronic
chr17:27617604(-) A-I      intronic
chr17:27604285(-) A-I      intronic
chr17:27598975(-) A-I      intronic
chr17:27615159(-) A-I      intronic
chr17:27601493(-) A-I      intronic
chr17:27610524(-) A-I      intronic
chr17:27607527(-) A-I      intronic
chr17:27601344(-) A-I      intronic
chr17:27595819(-) A-I      intronic
chr17:27603635(-) A-I      intronic
chr17:27617470(-) A-I      intronic
chr17:27608952(-) A-I      intronic
chr17:27608915(-) A-I      intronic
chr17:27598313(-) A-I      intronic
chr17:27601245(-) A-I      intronic
chr17:27616018(-) A-I      intronic
chr17:27606991(-) A-I      intronic
chr17:27607001(-) A-I      intronic
chr17:27608598(-) A-I      intronic
chr17:27609009(-) A-I      intronic
chr17:27607967(-) A-I      intronic
chr17:27604919(-) A-I      intronic
chr17:27608326(-) A-I      intronic
chr17:27596903(-) A-I      intronic
chr17:27612196(-) A-I      intronic
chr17:27607821(-) A-I      intronic
chr17:27599294(-) A-I      intronic
chr17:27604774(-) A-I      intronic
chr17:27586476(-) A-I      3'UTR
chr17:27597814(-) A-I      intronic
chr17:27604931(-) A-I      intronic
chr17:27606875(-) A-I      intronic
chr17:27604869(-) A-I      intronic
chr17:27606775(-) A-I      intronic
chr17:27607580(-) A-I      intronic
chr17:27606965(-) A-I      intronic
chr17:27607884(-) A-I      intronic
chr17:27615335(-) A-I      intronic
chr17:27604828(-) A-I      intronic
chr17:27606732(-) A-I      intronic
chr17:27606644(-) A-I      intronic
chr17:27604207(-) A-I      intronic
chr17:27606620(-) A-I      intronic
chr17:27604171(-) A-I      intronic
chr17:27600393(-) A-I      intronic
chr17:27609454(-) A-I      intronic
chr17:27607786(-) A-I      intronic
chr17:27616498(-) A-I      intronic
chr17:27611480(-) A-I      intronic
chr17:27617549(-) A-I      intronic
chr17:27602133(-) A-I      intronic
chr17:27601340(-) A-I      intronic
chr17:27617135(-) A-I      intronic
chr17:27615125(-) A-I      intronic
chr17:27604848(-) A-I      intronic
chr17:27602069(-) A-I      intronic
chr17:27617455(-) A-I      intronic
chr17:27598372(-) A-I      intronic
chr17:27598926(-) A-I      intronic
chr17:27606618(-) A-I      intronic
chr17:27607787(-) A-I      intronic
chr17:27605017(-) A-I      intronic
chr17:27608095(-) A-I      intronic
chr17:27598312(-) A-I      intronic
chr17:27604805(-) A-I      intronic
chr17:27599289(-) A-I      intronic
chr17:27598407(-) A-I      intronic
chr17:27617120(-) A-I      intronic
chr17:27601367(-) A-I      intronic
chr17:27598443(-) A-I      intronic
chr17:27598392(-) A-I      intronic
chr17:27608872(-) A-I      intronic
chr17:27604236(-) A-I      intronic
chr17:27609466(-) A-I      intronic
chr17:27610519(-) A-I      intronic
chr17:27604191(-) A-I      intronic
chr17:27617038(-) A-I      intronic
chr17:27604909(-) A-I      intronic
chr17:27604175(-) A-I      intronic
chr17:27609052(-) A-I      intronic
chr17:27607759(-) A-I      intronic
chr17:27601477(-) A-I      intronic
chr17:27598511(-) A-I      intronic
chr17:27604256(-) A-I      intronic
chr17:27604181(-) A-I      intronic
chr17:27601374(-) A-I      intronic
chr17:27603511(-) A-I      intronic
chr17:27616527(-) A-I      intronic
chr17:27595054(-) A-I      intronic
chr17:27599931(-) A-I      intronic
chr17:27601369(-) A-I      intronic
chr17:27616033(-) A-I      intronic
chr17:27604866(-) A-I      intronic
chr17:27602134(-) A-I      intronic
chr17:27608594(-) A-I      intronic
chr17:27608504(-) A-I      intronic
chr17:27599365(-) A-I      intronic
chr17:27616142(-) A-I      intronic
chr17:27607048(-) A-I      intronic
chr17:27615925(-) A-I      intronic
chr17:27616075(-) A-I      intronic
chr17:27603467(-) A-I      intronic
chr17:27617145(-) A-I      intronic
chr17:27604222(-) A-I      intronic
chr17:27603521(-) A-I      intronic
chr17:27602236(-) A-I      intronic
chr17:27608954(-) A-I      intronic
chr17:27601322(-) A-I      intronic
chr17:27610550(-) A-I      intronic
chr17:27595747(-) A-I      intronic
chr17:27607940(-) A-I      intronic
chr17:27617468(-) A-I      intronic
chr17:27607847(-) A-I      intronic
chr17:27600250(-) A-I      intronic
chr17:27598314(-) A-I      intronic
chr17:27604947(-) A-I      intronic
chr17:27586406(-) A-I      3'UTR
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED NUFIP2
chr17:27597814(-) A-I intron -    21960545
chr17:27601472(-) A-I intron -    21960545
chr17:27601477(-) A-I intron -    21960545
chr17:27601493(-) A-I intron -    21960545
chr17:27604175(-) A-I intron -    21960545
chr17:27604310(-) A-I intron -    21960545
chr17:27605537(-) A-I intron -    21960545
chr17:27606643(-) A-I intron -    21960545
chr17:27606732(-) A-I intron -    21960545
chr17:27610533(-) A-I intron -    21960545
chr17:27615335(-) A-I intron -    21960545
chr17:27615336(-) A-I intron -    21960545
chr17:27616096(-) A-I intron -    21960545
chr17:27616142(-) A-I intron -    21960545
chr17:27593128(-) A-T intron -    22484847
chr17:27593980(-) C-T intron -    22484847
chr17:27598511(-) A-G intron -    22484847
chr17:27602195(-) A-G intron -    22484847
chr17:27603515(-) A-G intron -    22484847
chr17:27604285(-) A-G intron -    22484847
chr17:27604302(-) A-G intron -    22484847
chr17:27606643(-) A-G intron -    22484847
chr17:27607063(-) A-G intron -    22484847
chr17:27607847(-) A-G intron -    22484847
chr17:27607884(-) A-G intron -    22484847
chr17:27608594(-) A-G intron -    22484847
chr17:27610550(-) A-G intron -    22484847
chr17:27615351(-) G-A intron -    22484847
chr17:27616498(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase NUFIP2
chr17:27582896-27582897(-) m6A 3'UTR       24981863
chr17:27586585-27586586(-) m6A 3'UTR       -
chr17:27587157-27587158(-) m6A 3'UTR       -
chr17:27588486-27588487(-) Y 3'UTR       26075521
chr17:27589128-27589129(-) m6A 3'UTR       27773535
chr17:27589135-27589136(-) m6A 3'UTR       27773535
chr17:27589193-27589194(-) m6A 3'UTR       27773535
chr17:27590040-27590041(-) m6A 3'UTR       26404942
chr17:27590753-27590754(-) m6A 3'UTR       24981863//26404942//27773535//22608085
chr17:27590803-27590804(-) m6A 3'UTR       24209618//24981863//26404942//27773535//22608085
chr17:27591100-27591101(-) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr17:27591232-27591233(-) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr17:27591329-27591330(-) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr17:27591360-27591361(-) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr17:27591454-27591455(-) m6A 3'UTR       24284625//24209618//24981863//28052920//27773535//27371828//22575960//22608085
chr17:27591497-27591498(-) m6A 3'UTR       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:27591547-27591548(-) m6A 3'UTR       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:27591552-27591553(-) m6A 3'UTR       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:27613091-27613092(-) m6A CDS//intron       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:27613116-27613117(-) m6A CDS//intron       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:27613158-27613159(-) m6A CDS//intron       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:27613197-27613198(-) m6A CDS//intron       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:27613229-27613230(-) m6A CDS//intron       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:27613261-27613262(-) m6A CDS//intron       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:27613300-27613301(-) m6A CDS//intron       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:27613345-27613346(-) m6A CDS//intron       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:27613450-27613451(-) m6A CDS//intron       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:27613518-27613519(-) m6A CDS//intron       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:27613531-27613532(-) m6A CDS//intron       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:27613573-27613574(-) m6A CDS//intron       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:27613606-27613607(-) m6A CDS//intron       24284625//24209618//24981863//28052920//26404942//27773535//22575960//22608085
chr17:27613616-27613617(-) m6A CDS//intron       24284625//24209618//24981863//28052920//26404942//27773535//22575960//22608085
chr17:27613644-27613645(-) m6A CDS//intron       24284625//24209618//24981863//28052920//26404942//27773535//22575960//22608085
chr17:27613663-27613664(-) m6A CDS//intron       24284625//24209618//24981863//28052920//26404942//27773535//22575960//22608085
chr17:27613744-27613745(-) m6A CDS//intron       24284625//24209618//24981863//28052920//26404942//27773535//22575960//22608085
chr17:27613837-27613838(-) m6A CDS//intron       24284625//24209618//24981863//28052920//26404942//27773535//22575960//22608085
chr17:27613843-27613844(-) m6A CDS//intron       24284625//24209618//24981863//28052920//26404942//27773535//22575960//22608085
chr17:27613896-27613897(-) m6A CDS//intron       24284625//24209618//24981863//28052920//26404942//27773535//22575960//22608085
chr17:27613906-27613907(-) m6A CDS//intron       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:27613917-27613918(-) m6A CDS//intron       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:27613974-27613975(-) m6A CDS//intron       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:27613997-27613998(-) m6A CDS//intron       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:27614008-27614009(-) m6A CDS//intron       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:27614016-27614017(-) m6A CDS//intron       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:27614090-27614091(-) m6A CDS//intron       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:27614132-27614133(-) m6A CDS//intron       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:27614146-27614147(-) m6A CDS//intron       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:27614161-27614162(-) m6A CDS//intron       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:27614210-27614211(-) m6A CDS//intron       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:27614233-27614234(-) m6A CDS//intron       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:27614240-27614241(-) m6A CDS//intron       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:27614246-27614247(-) m6A CDS//intron       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:27614266-27614267(-) m6A CDS//intron       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:27614286-27614287(-) m6A CDS//intron       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:27614304-27614305(-) m6A CDS//intron       24284625//24209618//24981863//28052920//26404942//27773535//22575960//22608085
chr17:27614529-27614530(-) m6A CDS//intron       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:27614538-27614539(-) m6A CDS//intron       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:27614560-27614561(-) m6A CDS//intron       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:27614599-27614600(-) m6A CDS//intron       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:27614616-27614617(-) m6A CDS//intron       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:27614682-27614683(-) m6A CDS//intron       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:27614723-27614724(-) m6A CDS//intron       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22608085
chr17:27620803-27620804(-) m6A CDS       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22608085
chr17:27620843-27620844(-) m6A CDS       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr17:27620855-27620856(-) m6A CDS       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-30a-3p
Exosome Brain tissue     23382797
Exosome Plasma     23663360
Exosome Breast milk|Endothelial cells|Epithelial cells|Tongue tissue     -
Microvesicle Seminal plasma     23539611
Microvesicle Follicular fluid     23666971
Microvesicle Serum     24797360
Microvesicle Fibroblasts|Mesenchymal stem cells|Urine     -
Mitochondrion Skeletal muscle myoblasts     21637849
Mitochondrion Cell line (HEK-293|HeLa)     22984580
NUFIP2
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HCC cell line (HepG2)     -
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus Colon cancer cells     24393600
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -
Ribosome HEK-293 cells     22199352

Related Drug Information:


Resource Symbol Drug Name PubChem
ID
Function Link  
RNAInter hsa-miR-30a-3p
Sorafenib 216239 Drug interaction    RC00000903
Resource Symbol Drug Name PubChem ID PMID
NoncoRNA hsa-miR-30a-3p

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-30a-3p
Interactor2: NUFIP2

Evidence Support:


Weak-Evidence PAR-CLIP
Support Database ViRBase

References:


PMID 22291592 Target region 3'UTR
Source ViRBase Interactor1 expression None
Tissue or cell line EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells Interactor2 expression None
Description We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.

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