Detail Information

Basic Information:


  VIRBase ID:  

HHID00044883

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-30a-3p:           STAU1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-30a-3p STAU1
miRBase
Accession/Entrez ID
MIMAT0000088 6780
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - PPP1R150//STAU

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-30a-3p
rs149150037 chr6:71403567    G/A
rs149150037 chr6:71403567    G/C
rs370184894 chr6:71403566    C/A
rs370184894 chr6:71403566    C/T
rs552541514 chr6:71403558    C/G
rs745605208 chr6:71403563    ATCCG/A
rs746505574 chr6:71403557    G/A
rs746505574 chr6:71403557    G/T
rs746965145 chr6:71403554    GCT/G
rs750918072 chr6:71403564    T/C
rs765735953 chr6:71403560    A/T
rs770865356 chr6:71403559    A/AC
rs776574456 chr6:71403560    A/AAGCTGGAGT
rs368070339 chr6:71403571    G/A
rs769702885 chr6:71403570    TG/T
rs775921090 chr6:71403574    AGCC/A
rs781617967 chr6:71403573    A/T

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR STAU1
chr20:47749233(-) A-I      intronic
chr20:47792168(-) A-I      intronic
chr20:47792196(-) A-I      intronic
chr20:47744191(-) A-I      intronic
chr20:47744180(-) A-I      intronic
chr20:47744181(-) A-I      intronic
chr20:47745901(-) A-I      intronic
chr20:47745910(-) A-I      intronic
chr20:47745921(-) A-I      intronic
chr20:47745981(-) A-I      intronic
chr20:47745993(-) A-I      intronic
chr20:47745998(-) A-I      intronic
chr20:47746019(-) A-I      intronic
chr20:47746026(-) A-I      intronic
chr20:47746028(-) A-I      intronic
chr20:47749209(-) A-I      intronic
chr20:47749227(-) A-I      intronic
chr20:47744754(-) A-I      intronic
chr20:47800496(-) A-I      intronic
chr20:47744755(-) A-I      intronic
chr20:47744794(-) A-I      intronic
chr20:47744811(-) A-I      intronic
chr20:47745250(-) A-I      intronic
chr20:47745825(-) A-I      intronic
chr20:47745828(-) A-I      intronic
chr20:47745893(-) A-I      intronic
chr20:47781684(-) A-I      intronic
chr20:47781620(-) A-I      intronic
chr20:47781222(-) A-I      intronic
chr20:47781099(-) A-I      intronic
chr20:47781083(-) A-I      intronic
chr20:47781077(-) A-I      intronic
chr20:47781041(-) A-I      intronic
chr20:47781022(-) A-I      intronic
chr20:47780761(-) A-I      intronic
chr20:47780753(-) A-I      intronic
chr20:47780729(-) A-I      intronic
chr20:47780685(-) A-I      intronic
chr20:47780645(-) A-I      intronic
chr20:47780606(-) A-I      intronic
chr20:47780167(-) A-I      intronic
chr20:47780166(-) A-I      intronic
chr20:47745929(-) A-I      intronic
chr20:47745933(-) A-I      intronic
chr20:47745936(-) A-I      intronic
chr20:47746024(-) A-I      intronic
chr20:47746190(-) A-I      intronic
chr20:47746218(-) A-I      intronic
chr20:47746224(-) A-I      intronic
chr20:47746234(-) A-I      intronic
chr20:47746257(-) A-I      intronic
chr20:47746293(-) A-I      intronic
chr20:47746368(-) A-I      intronic
chr20:47747332(-) A-I      intronic
chr20:47749148(-) A-I      intronic
chr20:47749174(-) A-I      intronic
chr20:47752531(-) A-I      intronic
chr20:47752726(-) A-I      intronic
chr20:47752751(-) A-I      intronic
chr20:47753331(-) A-I      intronic
chr20:47753372(-) A-I      intronic
chr20:47753373(-) A-I      intronic
chr20:47753399(-) A-I      intronic
chr20:47753442(-) A-I      intronic
chr20:47753644(-) A-I      intronic
chr20:47754340(-) A-I      intronic
chr20:47754615(-) A-I      intronic
chr20:47755227(-) A-I      intronic
chr20:47755300(-) A-I      intronic
chr20:47757867(-) A-I      intronic
chr20:47780103(-) A-I      intronic
chr20:47757869(-) A-I      intronic
chr20:47758096(-) A-I      intronic
chr20:47758189(-) A-I      intronic
chr20:47758227(-) A-I      intronic
chr20:47758726(-) A-I      intronic
chr20:47780101(-) A-I      intronic
chr20:47779683(-) A-I      intronic
chr20:47779682(-) A-I      intronic
chr20:47779643(-) A-I      intronic
chr20:47779629(-) A-I      intronic
chr20:47779617(-) A-I      intronic
chr20:47779605(-) A-I      intronic
chr20:47779601(-) A-I      intronic
chr20:47759520(-) A-I      intronic
chr20:47759912(-) A-I      intronic
chr20:47760086(-) A-I      intronic
chr20:47765625(-) A-I      intronic
chr20:47765631(-) A-I      intronic
chr20:47765639(-) A-I      intronic
chr20:47770077(-) A-I      intronic
chr20:47771208(-) A-I      intronic
chr20:47771229(-) A-I      intronic
chr20:47771235(-) A-I      intronic
chr20:47773533(-) A-I      intronic
chr20:47773608(-) A-I      intronic
chr20:47773632(-) A-I      intronic
chr20:47773651(-) A-I      intronic
chr20:47774024(-) A-I      intronic
chr20:47774114(-) A-I      intronic
chr20:47774141(-) A-I      intronic
chr20:47779599(-) A-I      intronic
chr20:47786996(-) A-I      intronic
chr20:47774145(-) A-I      intronic
chr20:47774155(-) A-I      intronic
chr20:47774194(-) A-I      intronic
chr20:47774236(-) A-I      intronic
chr20:47774241(-) A-I      intronic
chr20:47774243(-) A-I      intronic
chr20:47774562(-) A-I      intronic
chr20:47774574(-) A-I      intronic
chr20:47774627(-) A-I      intronic
chr20:47774691(-) A-I      intronic
chr20:47774695(-) A-I      intronic
chr20:47774697(-) A-I      intronic
chr20:47774719(-) A-I      intronic
chr20:47774737(-) A-I      intronic
chr20:47774750(-) A-I      intronic
chr20:47774762(-) A-I      intronic
chr20:47774780(-) A-I      intronic
chr20:47776209(-) A-I      intronic
chr20:47776242(-) A-I      intronic
chr20:47776323(-) A-I      intronic
chr20:47776356(-) A-I      intronic
chr20:47777745(-) A-I      intronic
chr20:47777769(-) A-I      intronic
chr20:47777778(-) A-I      intronic
chr20:47777781(-) A-I      intronic
chr20:47777817(-) A-I      intronic
chr20:47779189(-) A-I      intronic
chr20:47779191(-) A-I      intronic
chr20:47779201(-) A-I      intronic
chr20:47779581(-) A-I      intronic
chr20:47779566(-) A-I      intronic
chr20:47779563(-) A-I      intronic
chr20:47779526(-) A-I      intronic
chr20:47802764(-) A-I      intronic
chr20:47802573(-) A-I      intronic
chr20:47802517(-) A-I      intronic
chr20:47800555(-) A-I      intronic
chr20:47799329(-) A-I      intronic
chr20:47799313(-) A-I      intronic
chr20:47799294(-) A-I      intronic
chr20:47799276(-) A-I      intronic
chr20:47799267(-) A-I      intronic
chr20:47797074(-) A-I      intronic
chr20:47797062(-) A-I      intronic
chr20:47797049(-) A-I      intronic
chr20:47797043(-) A-I      intronic
chr20:47797040(-) A-I      intronic
chr20:47797039(-) A-I      intronic
chr20:47797029(-) A-I      intronic
chr20:47791408(-) A-I      intronic
chr20:47791362(-) A-I      intronic
chr20:47789908(-) A-I      intronic
chr20:47789838(-) A-I      intronic
chr20:47789773(-) A-I      intronic
chr20:47789751(-) A-I      intronic
chr20:47789750(-) A-I      intronic
chr20:47789512(-) A-I      intronic
chr20:47789430(-) A-I      intronic
chr20:47787060(-) A-I      intronic
chr20:47787032(-) A-I      intronic
chr20:47782168(-) A-I      intronic
chr20:47782145(-) A-I      intronic
chr20:47782051(-) A-I      intronic
chr20:47782048(-) A-I      intronic
chr20:47781720(-) A-I      intronic
chr20:47735859(-) A-I      intronic
chr20:47742882(-) A-I      intronic
chr20:47742894(-) A-I      intronic
chr20:47742907(-) A-I      intronic
chr20:47795236(-) A-I      intronic
chr20:47795188(-) A-I      intronic
chr20:47795179(-) A-I      intronic
chr20:47795176(-) A-I      intronic
chr20:47742931(-) A-I      intronic
chr20:47744071(-) A-I      intronic
chr20:47744075(-) A-I      intronic
chr20:47794104(-) A-I      intronic
chr20:47794099(-) A-I      intronic
chr20:47794094(-) A-I      intronic
chr20:47794068(-) A-I      intronic
chr20:47793910(-) A-I      intronic
chr20:47793909(-) A-I      intronic
chr20:47793907(-) A-I      intronic
chr20:47793816(-) A-I      intronic
chr20:47793814(-) A-I      intronic
chr20:47793810(-) A-I      intronic
chr20:47793673(-) A-I      intronic
chr20:47793667(-) A-I      intronic
chr20:47793652(-) A-I      intronic
chr20:47793613(-) A-I      intronic
chr20:47793587(-) A-I      intronic
chr20:47744080(-) A-I      intronic
chr20:47744095(-) A-I      intronic
chr20:47744134(-) A-I      intronic
chr20:47744358(-) A-I      intronic
chr20:47765731(-) A-I      intronic
chr20:47773542(-) A-I      intronic
chr20:47755257(-) A-I      intronic
chr20:47752752(-) A-I      intronic
chr20:47749052(-) A-I      intronic
chr20:47792155(-) A-I      intronic
chr20:47762641(-) A-I      intronic
chr20:47802492(-) A-I      intronic
chr20:47746310(-) A-I      intronic
chr20:47749214(-) A-I      intronic
chr20:47765585(-) A-I      intronic
chr20:47791785(-) A-I      intronic
chr20:47782049(-) A-I      intronic
chr20:47797065(-) A-I      intronic
chr20:47744135(-) A-I      intronic
chr20:47753589(-) A-I      intronic
chr20:47758082(-) A-I      intronic
chr20:47752716(-) A-I      intronic
chr20:47758072(-) A-I      intronic
chr20:47742895(-) A-I      intronic
chr20:47766971(-) A-I      intronic
chr20:47767093(-) A-I      intronic
chr20:47774575(-) A-I      intronic
chr20:47752594(-) A-I      intronic
chr20:47749184(-) A-I      intronic
chr20:47789823(-) A-I      intronic
chr20:47759416(-) A-I      intronic
chr20:47755316(-) A-I      intronic
chr20:47795421(-) A-I      intronic
chr20:47742881(-) A-I      intronic
chr20:47780940(-) A-I      intronic
chr20:47746277(-) A-I      intronic
chr20:47767171(-) A-I      intronic
chr20:47755177(-) A-I      intronic
chr20:47754579(-) A-I      intronic
chr20:47792298(-) A-I      intronic
chr20:47752730(-) A-I      intronic
chr20:47781108(-) A-I      intronic
chr20:47758066(-) A-I      intronic
chr20:47771501(-) A-I      intronic
chr20:47749244(-) A-I      intronic
chr20:47792047(-) A-I      intronic
chr20:47799264(-) A-I      intronic
chr20:47779698(-) A-I      intronic
chr20:47758175(-) A-I      intronic
chr20:47794169(-) A-I      intronic
chr20:47795029(-) A-I      intronic
chr20:47800735(-) A-I      intronic
chr20:47745949(-) A-I      intronic
chr20:47755258(-) A-I      intronic
chr20:47785619(-) A-I      intronic
chr20:47782011(-) A-I      intronic
chr20:47774820(-) A-I      intronic
chr20:47746415(-) A-I      intronic
chr20:47779672(-) A-I      intronic
chr20:47771213(-) A-I      intronic
chr20:47749108(-) A-I      intronic
chr20:47737511(-) A-I      intronic
chr20:47760047(-) A-I      intronic
chr20:47780684(-) A-I      intronic
chr20:47780399(-) A-I      intronic
chr20:47789949(-) A-I      intronic
chr20:47750803(-) A-I      intronic
chr20:47757953(-) A-I      intronic
chr20:47758544(-) A-I      intronic
chr20:47769019(-) A-I      intronic
chr20:47750966(-) A-I      intronic
chr20:47802799(-) A-I      intronic
chr20:47799254(-) A-I      intronic
chr20:47793653(-) A-I      intronic
chr20:47776355(-) A-I      intronic
chr20:47782076(-) A-I      intronic
chr20:47793813(-) A-I      intronic
chr20:47791593(-) A-I      5'UTR
chr20:47795708(-) A-I      5'UTR
chr20:47789738(-) A-I      intronic
chr20:47791551(-) A-I      intronic
chr20:47789576(-) A-I      intronic
chr20:47759437(-) A-I      intronic
chr20:47743036(-) A-I      intronic
chr20:47745963(-) A-I      intronic
chr20:47746402(-) A-I      intronic
chr20:47754490(-) A-I      intronic
chr20:47754614(-) A-I      intronic
chr20:47757904(-) A-I      intronic
chr20:47742933(-) A-I      intronic
chr20:47794202(-) A-I      intronic
chr20:47793676(-) A-I      intronic
chr20:47746385(-) A-I      intronic
chr20:47753505(-) A-I      intronic
chr20:47802490(-) A-I      intronic
chr20:47782050(-) A-I      intronic
chr20:47780234(-) A-I      intronic
chr20:47793720(-) A-I      intronic
chr20:47771459(-) A-I      intronic
chr20:47759964(-) A-I      intronic
chr20:47779144(-) A-I      intronic
chr20:47752621(-) A-I      intronic
chr20:47794523(-) A-I      intronic
chr20:47762691(-) A-I      intronic
chr20:47759541(-) A-I      intronic
chr20:47745892(-) A-I      intronic
chr20:47754432(-) A-I      intronic
chr20:47765558(-) A-I      intronic
chr20:47749053(-) A-I      intronic
chr20:47780140(-) A-I      intronic
chr20:47769072(-) A-I      intronic
chr20:47750929(-) A-I      intronic
chr20:47796998(-) A-I      intronic
chr20:47749047(-) A-I      intronic
chr20:47794026(-) A-I      intronic
chr20:47752834(-) A-I      intronic
chr20:47800710(-) A-I      intronic
chr20:47749252(-) A-I      intronic
chr20:47780036(-) A-I      intronic
chr20:47754788(-) A-I      intronic
chr20:47731975(-) A-I      intronic
chr20:47781270(-) A-I      intronic
chr20:47746358(-) A-I      intronic
chr20:47754484(-) A-I      intronic
chr20:47802761(-) A-I      intronic
chr20:47771587(-) A-I      intronic
chr20:47746341(-) A-I      intronic
chr20:47759611(-) A-I      intronic
chr20:47780200(-) A-I      intronic
chr20:47799186(-) A-I      intronic
chr20:47767073(-) A-I      intronic
chr20:47777752(-) A-I      intronic
chr20:47758558(-) A-I      intronic
chr20:47765644(-) A-I      intronic
chr20:47742989(-) A-I      intronic
chr20:47754512(-) A-I      intronic
chr20:47788088(-) A-I      intronic
chr20:47749210(-) A-I      intronic
chr20:47754698(-) A-I      intronic
chr20:47786990(-) A-I      intronic
chr20:47758169(-) A-I      intronic
chr20:47776277(-) A-I      intronic
chr20:47782010(-) A-I      intronic
chr20:47798221(-) A-I      intronic
chr20:47776236(-) A-I      intronic
chr20:47773578(-) A-I      intronic
chr20:47765666(-) A-I      intronic
chr20:47774671(-) A-I      intronic
chr20:47781203(-) A-I      intronic
chr20:47791040(-) A-I      intronic
chr20:47802672(-) A-I      intronic
chr20:47781265(-) A-I      intronic
chr20:47745957(-) A-I      intronic
chr20:47758543(-) A-I      intronic
chr20:47752756(-) A-I      intronic
chr20:47770126(-) A-I      intronic
chr20:47785625(-) A-I      intronic
chr20:47791074(-) A-I      intronic
chr20:47762695(-) A-I      intronic
chr20:47758516(-) A-I      intronic
chr20:47781287(-) A-I      intronic
chr20:47773989(-) A-I      intronic
chr20:47789584(-) A-I      intronic
chr20:47759610(-) A-I      intronic
chr20:47755312(-) A-I      intronic
chr20:47731976(-) A-I      intronic
chr20:47758016(-) A-I      intronic
chr20:47787026(-) A-I      intronic
chr20:47758266(-) A-I      intronic
chr20:47802800(-) A-I      intronic
chr20:47789986(-) A-I      intronic
chr20:47802507(-) A-I      intronic
chr20:47752562(-) A-I      intronic
chr20:47746328(-) A-I      intronic
chr20:47746419(-) A-I      intronic
chr20:47746359(-) A-I      intronic
chr20:47746300(-) A-I      intronic
chr20:47767094(-) A-I      intronic
chr20:47781106(-) A-I      intronic
chr20:47746420(-) A-I      intronic
chr20:47732041(-) A-I      intronic
chr20:47754616(-) A-I      intronic
chr20:47749079(-) A-I      intronic
chr20:47780070(-) A-I      intronic
chr20:47779546(-) A-I      intronic
chr20:47779666(-) A-I      intronic
chr20:47779691(-) A-I      intronic
chr20:47774808(-) A-I      intronic
chr20:47749130(-) A-I      intronic
chr20:47782046(-) A-I      intronic
chr20:47773903(-) A-I      intronic
chr20:47753704(-) A-I      intronic
chr20:47760127(-) A-I      intronic
chr20:47759539(-) A-I      intronic
chr20:47780091(-) A-I      intronic
chr20:47780704(-) A-I      intronic
chr20:47759884(-) A-I      intronic
chr20:47759451(-) A-I      intronic
chr20:47745989(-) A-I      intronic
chr20:47797133(-) A-I      intronic
chr20:47743053(-) A-I      intronic
chr20:47754270(-) A-I      intronic
chr20:47744160(-) A-I      intronic
chr20:47773975(-) A-I      intronic
chr20:47757954(-) A-I      intronic
chr20:47767066(-) A-I      intronic
chr20:47758898(-) A-I      intronic
chr20:47767170(-) A-I      intronic
chr20:47752755(-) A-I      intronic
chr20:47754565(-) A-I      intronic
chr20:47755238(-) A-I      intronic
chr20:47760070(-) A-I      intronic
chr20:47775225(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED STAU1
chr20:47751283(-) A-I intron -    22327324
chr20:47746296(-) A-I intron -    21960545
chr20:47746415(-) A-G intron -    22484847
chr20:47746420(-) A-G intron -    22484847
chr20:47749053(-) A-G intron -    22484847
chr20:47749108(-) A-G intron -    22484847
chr20:47753704(-) A-G intron -    22484847
chr20:47755177(-) A-G intron -    22484847
chr20:47755316(-) A-G intron -    22484847
chr20:47757891(-) A-G intron -    22484847
chr20:47759402(-) A-G intron -    22484847
chr20:47759416(-) A-G intron -    22484847
chr20:47779501(-) A-G intron -    22484847
chr20:47779698(-) A-G intron -    22484847
chr20:47780036(-) A-G intron -    22484847
chr20:47781777(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase STAU1
chr20:47730183-47730184(-) Y 3'UTR       26075521
chr20:47730542-47730543(-) m6A 3'UTR       24284625
chr20:47730577-47730578(-) m6A 3'UTR       24284625//22575960
chr20:47730587-47730588(-) m6A 3'UTR       24284625//22575960
chr20:47730597-47730598(-) m6A 3'UTR       24284625//22575960
chr20:47730641-47730642(-) m6A 3'UTR       24284625//22575960
chr20:47730669-47730670(-) m6A 3'UTR       24284625//22575960
chr20:47730725-47730726(-) m6A 3'UTR       24284625//27773535
chr20:47730736-47730737(-) m6A 3'UTR       24284625//27773535
chr20:47731004-47731005(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085
chr20:47731015-47731016(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085
chr20:47731025-47731026(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085
chr20:47731127-47731128(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr20:47731234-47731235(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085
chr20:47731263-47731264(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr20:47731272-47731273(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr20:47731309-47731310(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr20:47731356-47731357(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr20:47731396-47731397(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr20:47731413-47731414(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085
chr20:47732329-47732330(-) m6A CDS       24284625//24209618//24981863//27773535//22608085
chr20:47732340-47732341(-) m6A CDS       24284625//24209618//24981863//27773535//22608085
chr20:47732366-47732367(-) m6A CDS       24284625//24209618//24981863//27773535//22608085
chr20:47732393-47732394(-) m6A CDS       24284625//27773535
chr20:47734341-47734342(-) m6A CDS       27773535
chr20:47734358-47734359(-) m6A CDS       27773535
chr20:47734370-47734371(-) m6A CDS       27773535
chr20:47734414-47734415(-) m6A CDS       24284625//27773535
chr20:47734523-47734524(-) m6A CDS       24284625//27773535
chr20:47734872-47734873(-) m6A CDS       24284625
chr20:47734897-47734898(-) m6A CDS//intron       24284625//22575960
chr20:47734930-47734931(-) m6A CDS       24284625//27773535//22575960
chr20:47736542-47736543(-) m6A CDS       24284625//24981863//27773535//27371828//22575960
chr20:47736591-47736592(-) m6A CDS       24284625//24981863//27773535//27371828//22575960
chr20:47736651-47736652(-) m6A CDS       24284625//24981863//27773535//27371828//22575960
chr20:47739765-47739766(-) m6A CDS       24981863//28052920//27773535
chr20:47740923-47740924(-) m6A CDS       24981863//28052920//27773535
chr20:47740928-47740929(-) m6A CDS       24981863//28052920//27773535
chr20:47741089-47741090(-) m6A CDS       24981863
chr20:47741127-47741128(-) m6A CDS//intron       24981863
chr20:47752388-47752389(-) m6A CDS       24981863
chr20:47768181-47768182(-) m6A CDS       24981863//26404942
chr20:47768193-47768194(-) m6A CDS       24981863//26404942
chr20:47768198-47768199(-) m6A CDS       24981863//26404942
chr20:47768223-47768224(-) m6A CDS       24981863//26404942
chr20:47768238-47768239(-) m6A CDS       26404942
chr20:47782809-47782810(-) m6A 5'UTR//intron       24284625
chr20:47782816-47782817(-) m6A 5'UTR//intron       24284625
chr20:47790767-47790768(-) m6A 5'UTR//intron       24284625//24209618//24981863
chr20:47790773-47790774(-) m6A 5'UTR//intron       24284625//24209618//24981863
chr20:47790778-47790779(-) m6A 5'UTR//intron       24284625//24209618//24981863
chr20:47804688-47804689(-) m6A 5'UTR       24284625//24209618//25456834//24981863//27773535//27371828//27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-30a-3p
Exosome Brain tissue     23382797
Exosome Plasma     23663360
Exosome Breast milk|Endothelial cells|Epithelial cells|Tongue tissue     -
Microvesicle Seminal plasma     23539611
Microvesicle Follicular fluid     23666971
Microvesicle Serum     24797360
Microvesicle Fibroblasts|Mesenchymal stem cells|Urine     -
Mitochondrion Skeletal muscle myoblasts     21637849
Mitochondrion Cell line (HEK-293|HeLa)     22984580
STAU1
Chromatin K562 cells     -
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Cytosol HCC cell line (HepG2)     -
Exosome Blood     -
Insoluble cytoplasm HCC cell line (HepG2)|K562 cells     -
Membrane HCC cell line (HepG2)|K562 cells     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus Nasopharyngeal carcinoma cells     20498841
Nucleus Nasopharyngeal carcinoma cells     20498841
Nucleus HCC cell line (HepG2)|HeLa-S3 cells     -
Ribosome-free cytosol Colon cancer cells     24393600

Related Drug Information:


Resource Symbol Drug Name PubChem
ID
Function Link  
RNAInter hsa-miR-30a-3p
Sorafenib 216239 Drug interaction    RC00000903
Resource Symbol Drug Name PubChem ID PMID
NoncoRNA hsa-miR-30a-3p

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-30a-3p
Interactor2: STAU1

Evidence Support:


Weak-Evidence PAR-CLIP
Support Database ViRBase

References:


PMID 22291592 Target region 3'UTR
Source ViRBase Interactor1 expression None
Tissue or cell line EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells Interactor2 expression None
Description We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.

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