Detail Information

Basic Information:


  VIRBase ID:  

HHID00044877

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-30a-3p:           PDE7A:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-30a-3p PDE7A
miRBase
Accession/Entrez ID
MIMAT0000088 5150
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - HCP1//PDE7

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-30a-3p
rs149150037 chr6:71403567    G/A
rs149150037 chr6:71403567    G/C
rs370184894 chr6:71403566    C/A
rs370184894 chr6:71403566    C/T
rs552541514 chr6:71403558    C/G
rs745605208 chr6:71403563    ATCCG/A
rs746505574 chr6:71403557    G/A
rs746505574 chr6:71403557    G/T
rs746965145 chr6:71403554    GCT/G
rs750918072 chr6:71403564    T/C
rs765735953 chr6:71403560    A/T
rs770865356 chr6:71403559    A/AC
rs776574456 chr6:71403560    A/AAGCTGGAGT
rs368070339 chr6:71403571    G/A
rs769702885 chr6:71403570    TG/T
rs775921090 chr6:71403574    AGCC/A
rs781617967 chr6:71403573    A/T

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR PDE7A
chr8:66642597(-) A-I      intronic
chr8:66642997(-) A-I      intronic
chr8:66643046(-) A-I      intronic
chr8:66644930(-) A-I      intronic
chr8:66644947(-) A-I      intronic
chr8:66647763(-) A-I      intronic
chr8:66648759(-) A-I      intronic
chr8:66648838(-) A-I      intronic
chr8:66669883(-) A-I      intronic
chr8:66669939(-) A-I      intronic
chr8:66689383(-) A-I      intronic
chr8:66689407(-) A-I      intronic
chr8:66689411(-) A-I      intronic
chr8:66689426(-) A-I      intronic
chr8:66682571(-) A-I      intronic
chr8:66682550(-) A-I      intronic
chr8:66682536(-) A-I      intronic
chr8:66682535(-) A-I      intronic
chr8:66680833(-) A-I      intronic
chr8:66680797(-) A-I      intronic
chr8:66680785(-) A-I      intronic
chr8:66682574(-) A-I      intronic
chr8:66680595(-) A-I      intronic
chr8:66733116(-) A-I      intronic
chr8:66732998(-) A-I      intronic
chr8:66732994(-) A-I      intronic
chr8:66732628(-) A-I      intronic
chr8:66732605(-) A-I      intronic
chr8:66732587(-) A-I      intronic
chr8:66732574(-) A-I      intronic
chr8:66732509(-) A-I      intronic
chr8:66732483(-) A-I      intronic
chr8:66732413(-) A-I      intronic
chr8:66732374(-) A-I      intronic
chr8:66731545(-) A-I      intronic
chr8:66731521(-) A-I      intronic
chr8:66731514(-) A-I      intronic
chr8:66731509(-) A-I      intronic
chr8:66731505(-) A-I      intronic
chr8:66731387(-) A-I      intronic
chr8:66730259(-) A-I      intronic
chr8:66730192(-) A-I      intronic
chr8:66730177(-) A-I      intronic
chr8:66730162(-) A-I      intronic
chr8:66730155(-) A-I      intronic
chr8:66730116(-) A-I      intronic
chr8:66730109(-) A-I      intronic
chr8:66727253(-) A-I      intronic
chr8:66727234(-) A-I      intronic
chr8:66727233(-) A-I      intronic
chr8:66727229(-) A-I      intronic
chr8:66727216(-) A-I      intronic
chr8:66688027(-) A-I      intronic
chr8:66688017(-) A-I      intronic
chr8:66687931(-) A-I      intronic
chr8:66678472(-) A-I      intronic
chr8:66678453(-) A-I      intronic
chr8:66678385(-) A-I      intronic
chr8:66678384(-) A-I      intronic
chr8:66678369(-) A-I      intronic
chr8:66678354(-) A-I      intronic
chr8:66678345(-) A-I      intronic
chr8:66678319(-) A-I      intronic
chr8:66678318(-) A-I      intronic
chr8:66678313(-) A-I      intronic
chr8:66673572(-) A-I      intronic
chr8:66673571(-) A-I      intronic
chr8:66673566(-) A-I      intronic
chr8:66673505(-) A-I      intronic
chr8:66673504(-) A-I      intronic
chr8:66673502(-) A-I      intronic
chr8:66673489(-) A-I      intronic
chr8:66673439(-) A-I      intronic
chr8:66670057(-) A-I      intronic
chr8:66669962(-) A-I      intronic
chr8:66669911(-) A-I      intronic
chr8:66667469(-) A-I      intronic
chr8:66667396(-) A-I      intronic
chr8:66667358(-) A-I      intronic
chr8:66667204(-) A-I      intronic
chr8:66667153(-) A-I      intronic
chr8:66667138(-) A-I      intronic
chr8:66667118(-) A-I      intronic
chr8:66666843(-) A-I      intronic
chr8:66666748(-) A-I      intronic
chr8:66666746(-) A-I      intronic
chr8:66666743(-) A-I      intronic
chr8:66666742(-) A-I      intronic
chr8:66666740(-) A-I      intronic
chr8:66666737(-) A-I      intronic
chr8:66664008(-) A-I      intronic
chr8:66663904(-) A-I      intronic
chr8:66650949(-) A-I      intronic
chr8:66650947(-) A-I      intronic
chr8:66650855(-) A-I      intronic
chr8:66650846(-) A-I      intronic
chr8:66649929(-) A-I      intronic
chr8:66649923(-) A-I      intronic
chr8:66649787(-) A-I      intronic
chr8:66649341(-) A-I      intronic
chr8:66649324(-) A-I      intronic
chr8:66649317(-) A-I      intronic
chr8:66649156(-) A-I      intronic
chr8:66648743(-) A-I      intronic
chr8:66648055(-) A-I      intronic
chr8:66647989(-) A-I      intronic
chr8:66647818(-) A-I      intronic
chr8:66647802(-) A-I      intronic
chr8:66647797(-) A-I      intronic
chr8:66647759(-) A-I      intronic
chr8:66647704(-) A-I      intronic
chr8:66645757(-) A-I      intronic
chr8:66645756(-) A-I      intronic
chr8:66644917(-) A-I      intronic
chr8:66643096(-) A-I      intronic
chr8:66643095(-) A-I      intronic
chr8:66643035(-) A-I      intronic
chr8:66642977(-) A-I      intronic
chr8:66642959(-) A-I      intronic
chr8:66642904(-) A-I      intronic
chr8:66642628(-) A-I      intronic
chr8:66642594(-) A-I      intronic
chr8:66642593(-) A-I      intronic
chr8:66642590(-) A-I      intronic
chr8:66642100(-) A-I      intronic
chr8:66641981(-) A-I      intronic
chr8:66641973(-) A-I      intronic
chr8:66641910(-) A-I      intronic
chr8:66641895(-) A-I      intronic
chr8:66641864(-) A-I      intronic
chr8:66641830(-) A-I      intronic
chr8:66643049(-) A-I      intronic
chr8:66650000(-) A-I      intronic
chr8:66642946(-) A-I      intronic
chr8:66647675(-) A-I      intronic
chr8:66642906(-) A-I      intronic
chr8:66642919(-) A-I      intronic
chr8:66641904(-) A-I      intronic
chr8:66643076(-) A-I      intronic
chr8:66650802(-) A-I      intronic
chr8:66642694(-) A-I      intronic
chr8:66666997(-) A-I      intronic
chr8:66649931(-) A-I      intronic
chr8:66642031(-) A-I      intronic
chr8:66649337(-) A-I      intronic
chr8:66642027(-) A-I      intronic
chr8:66644816(-) A-I      intronic
chr8:66642544(-) A-I      intronic
chr8:66732579(-) A-I      intronic
chr8:66650035(-) A-I      intronic
chr8:66644921(-) A-I      intronic
chr8:66649293(-) A-I      intronic
chr8:66667088(-) A-I      intronic
chr8:66732910(-) A-I      intronic
chr8:66648731(-) A-I      intronic
chr8:66667191(-) A-I      intronic
chr8:66648870(-) A-I      intronic
chr8:66648753(-) A-I      intronic
chr8:66644827(-) A-I      intronic
chr8:66645738(-) A-I      intronic
chr8:66642918(-) A-I      intronic
chr8:66727280(-) A-I      intronic
chr8:66642608(-) A-I      intronic
chr8:66732903(-) A-I      intronic
chr8:66644403(-) A-I      intronic
chr8:66649932(-) A-I      intronic
chr8:66649947(-) A-I      intronic
chr8:66649892(-) A-I      intronic
chr8:66650026(-) A-I      intronic
chr8:66649930(-) A-I      intronic
chr8:66649886(-) A-I      intronic
chr8:66648891(-) A-I      intronic
chr8:66648846(-) A-I      intronic
chr8:66648767(-) A-I      intronic
chr8:66730260(-) A-I      intronic
chr8:66733057(-) A-I      intronic
chr8:66645732(-) A-I      intronic
chr8:66647792(-) A-I      intronic
chr8:66689400(-) A-I      intronic
chr8:66746075(-) A-I      intronic
chr8:66634129(-) A-I      3'UTR
chr8:66732597(-) A-I      intronic
chr8:66648866(-) A-I      intronic
chr8:66648963(-) A-I      intronic
chr8:66649140(-) A-I      intronic
chr8:66647711(-) A-I      intronic
chr8:66649922(-) A-I      intronic
chr8:66667334(-) A-I      intronic
chr8:66641922(-) A-I      intronic
chr8:66649924(-) A-I      intronic
chr8:66649233(-) A-I      intronic
chr8:66649190(-) A-I      intronic
chr8:66644951(-) A-I      intronic
chr8:66733004(-) A-I      intronic
chr8:66667318(-) A-I      intronic
chr8:66667037(-) A-I      intronic
chr8:66645838(-) A-I      intronic
chr8:66643114(-) A-I      intronic
chr8:66643058(-) A-I      intronic
chr8:66672431(-) A-I      intronic
chr8:66667341(-) A-I      intronic
chr8:66650935(-) A-I      intronic
chr8:66732979(-) A-I      intronic
chr8:66667420(-) A-I      intronic
chr8:66667137(-) A-I      intronic
chr8:66667459(-) A-I      intronic
chr8:66733028(-) A-I      intronic
chr8:66647825(-) A-I      intronic
chr8:66641896(-) A-I      intronic
chr8:66648814(-) A-I      intronic
chr8:66731550(-) A-I      intronic
chr8:66650941(-) A-I      intronic
chr8:66670047(-) A-I      intronic
chr8:66642945(-) A-I      intronic
chr8:66667034(-) A-I      intronic
chr8:66649933(-) A-I      intronic
chr8:66642513(-) A-I      intronic
chr8:66650905(-) A-I      intronic
chr8:66666766(-) A-I      intronic
chr8:66672363(-) A-I      intronic
chr8:66643015(-) A-I      intronic
chr8:66647819(-) A-I      intronic
chr8:66685067(-) A-I      intronic
chr8:66643106(-) A-I      intronic
chr8:66642971(-) A-I      intronic
chr8:66649329(-) A-I      intronic
chr8:66648830(-) A-I      intronic
chr8:66672391(-) A-I      intronic
chr8:66649773(-) A-I      intronic
chr8:66746155(-) A-I      intronic
chr8:66672353(-) A-I      intronic
chr8:66642514(-) A-I      intronic
chr8:66648766(-) A-I      intronic
chr8:66642584(-) A-I      intronic
chr8:66642522(-) A-I      intronic
chr8:66649214(-) A-I      intronic
chr8:66732519(-) A-I      intronic
chr8:66642647(-) A-I      intronic
chr8:66643144(-) A-I      intronic
chr8:66649326(-) A-I      intronic
chr8:66669921(-) A-I      intronic
chr8:66733003(-) A-I      intronic
chr8:66649296(-) A-I      intronic
chr8:66667195(-) A-I      intronic
chr8:66642966(-) A-I      intronic
chr8:66648821(-) A-I      intronic
chr8:66644331(-) A-I      intronic
chr8:66649309(-) A-I      intronic
chr8:66643000(-) A-I      intronic
chr8:66641831(-) A-I      intronic
chr8:66647616(-) A-I      intronic
chr8:66647963(-) A-I      intronic
chr8:66644944(-) A-I      intronic
chr8:66644525(-) A-I      intronic
chr8:66643101(-) A-I      intronic
chr8:66744931(-) A-I      intronic
chr8:66649266(-) A-I      intronic
chr8:66642071(-) A-I      intronic
chr8:66644936(-) A-I      intronic
chr8:66649865(-) A-I      intronic
chr8:66642585(-) A-I      intronic
chr8:66642017(-) A-I      intronic
chr8:66649185(-) A-I      intronic
chr8:66644943(-) A-I      intronic
chr8:66634036(-) A-I      intronic
chr8:66642583(-) A-I      intronic
chr8:66642993(-) A-I      intronic
chr8:66642454(-) A-I      intronic
chr8:66731511(-) A-I      intronic
chr8:66672366(-) A-I      intronic
chr8:66643018(-) A-I      intronic
chr8:66647646(-) A-I      intronic
chr8:66649248(-) A-I      intronic
chr8:66746077(-) A-I      intronic
chr8:66650797(-) A-I      intronic
chr8:66649882(-) A-I      intronic
chr8:66648770(-) A-I      intronic
chr8:66643071(-) A-I      intronic
chr8:66648804(-) A-I      intronic
chr8:66649891(-) A-I      intronic
chr8:66732617(-) A-I      intronic
chr8:66649215(-) A-I      intronic
chr8:66642592(-) A-I      intronic
chr8:66642591(-) A-I      intronic
chr8:66650027(-) A-I      intronic
chr8:66642470(-) A-I      intronic
chr8:66649918(-) A-I      intronic
chr8:66649229(-) A-I      intronic
chr8:66642580(-) A-I      intronic
chr8:66730254(-) A-I      intronic
chr8:66647676(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED PDE7A
chr8:66642454(-) A-I intron -    15342557
chr8:66642470(-) A-I intron -    15342557   //21960545
chr8:66642513(-) A-I intron -    15342557
chr8:66642514(-) A-I intron -    15342557
chr8:66642518(-) A-I intron -    15342557   //22327324
chr8:66642521(-) A-I intron -    15342557
chr8:66642522(-) A-I intron -    15342557
chr8:66642544(-) A-I intron -    15342557
chr8:66645738(-) A-I intron -    15342557
chr8:66645848(-) A-I intron -    15342557
chr8:66642583(-) A-I intron -    22327324
chr8:66642584(-) A-I intron -    22327324
chr8:66642945(-) A-I intron -    21960545   //22327324
chr8:66642966(-) A-I intron -    21960545   //22327324
chr8:66643015(-) A-I intron -    22327324
chr8:66643018(-) A-I intron -    21960545   //22327324
chr8:66643075(-) A-I intron -    22327324
chr8:66643076(-) A-I intron -    22327324
chr8:66643144(-) A-I intron -    21960545   //22327324
chr8:66648870(-) A-I intron -    22327324
chr8:66648891(-) A-I intron -    21960545   //22327324
chr8:66649865(-) A-I intron -    22327324
chr8:66649936(-) A-I intron -    22327324
chr8:66641859(-) A-I intron -    21960545
chr8:66642958(-) A-I intron -    21960545
chr8:66643014(-) A-I intron -    21960545
chr8:66643071(-) A-I intron -    21960545
chr8:66648766(-) A-I intron -    21960545
chr8:66648785(-) A-I intron -    21960545
chr8:66680660(-) A-G intron -    22484847
chr8:66680725(-) A-G intron -    22484847
chr8:66680788(-) A-G intron -    22484847
chr8:66680796(-) A-G intron -    22484847
chr8:66680800(-) A-G intron -    22484847
chr8:66680809(-) A-G intron -    22484847
chr8:66680830(-) A-G intron -    22484847
chr8:66680831(-) A-G intron -    22484847
chr8:66680853(-) A-G intron -    22484847
chr8:66682594(-) T-C intron -    22484847
chr8:66634129(-) A-G intron -    22484847
chr8:66641831(-) A-G intron -    22484847
chr8:66641859(-) A-G intron -    22484847
chr8:66641884(-) A-G intron -    22484847
chr8:66641892(-) T-C intron -    22484847
chr8:66641922(-) A-G intron -    22484847
chr8:66642017(-) A-G intron -    22484847
chr8:66642027(-) A-G intron -    22484847
chr8:66642031(-) A-G intron -    22484847
chr8:66642433(-) C-A intron -    22484847
chr8:66642518(-) A-G intron -    22484847
chr8:66642521(-) A-G intron -    22484847
chr8:66642580(-) A-G intron -    22484847
chr8:66642583(-) A-G intron -    22484847
chr8:66642584(-) A-G intron -    22484847
chr8:66642585(-) A-G intron -    22484847
chr8:66642591(-) A-G intron -    22484847
chr8:66642608(-) A-G intron -    22484847
chr8:66642906(-) A-G intron -    22484847
chr8:66642919(-) A-G intron -    22484847
chr8:66642945(-) A-G intron -    22484847
chr8:66642946(-) A-G intron -    22484847
chr8:66642949(-) T-C intron -    22484847
chr8:66642953(-) T-C intron -    22484847
chr8:66642958(-) A-G intron -    22484847
chr8:66642966(-) A-G intron -    22484847
chr8:66642971(-) A-G intron -    22484847
chr8:66643000(-) A-G intron -    22484847
chr8:66643003(-) T-C intron -    22484847
chr8:66643004(-) T-C intron -    22484847
chr8:66643013(-) T-C intron -    22484847
chr8:66643016(-) T-C intron -    22484847
chr8:66643018(-) A-G intron -    22484847
chr8:66643047(-) T-C intron -    22484847
chr8:66643050(-) A-G intron -    22484847
chr8:66643065(-) T-C intron -    22484847
chr8:66643070(-) T-C intron -    22484847
chr8:66643071(-) A-G intron -    22484847
chr8:66643075(-) A-G intron -    22484847
chr8:66643076(-) A-G intron -    22484847
chr8:66643101(-) A-G intron -    22484847
chr8:66643106(-) A-G intron -    22484847
chr8:66643111(-) A-G intron -    22484847
chr8:66643114(-) A-G intron -    22484847
chr8:66643144(-) A-G intron -    22484847
chr8:66643156(-) A-G intron -    22484847
chr8:66644296(-) A-G intron -    22484847
chr8:66644311(-) C-T intron -    22484847
chr8:66644525(-) A-G intron -    22484847
chr8:66644526(-) C-G intron -    22484847
chr8:66644827(-) A-G intron -    22484847
chr8:66644944(-) A-G intron -    22484847
chr8:66644951(-) A-G intron -    22484847
chr8:66645732(-) A-G intron -    22484847
chr8:66645838(-) A-G intron -    22484847
chr8:66645848(-) A-G intron -    22484847
chr8:66647616(-) A-G intron -    22484847
chr8:66647619(-) A-G intron -    22484847
chr8:66647672(-) A-G intron -    22484847
chr8:66647792(-) A-G intron -    22484847
chr8:66648726(-) T-C intron -    22484847
chr8:66648766(-) A-G intron -    22484847
chr8:66648770(-) A-G intron -    22484847
chr8:66648785(-) A-G intron -    22484847
chr8:66648814(-) A-G intron -    22484847
chr8:66648821(-) A-G intron -    22484847
chr8:66648824(-) A-G intron -    22484847
chr8:66648866(-) A-G intron -    22484847
chr8:66648870(-) A-G intron -    22484847
chr8:66648891(-) A-G intron -    22484847
chr8:66648935(-) A-G intron -    22484847
chr8:66648963(-) A-G intron -    22484847
chr8:66649185(-) A-G intron -    22484847
chr8:66649194(-) A-G intron -    22484847
chr8:66649293(-) A-G intron -    22484847
chr8:66649299(-) A-G intron -    22484847
chr8:66649309(-) A-G intron -    22484847
chr8:66649329(-) A-G intron -    22484847
chr8:66649783(-) T-C intron -    22484847
chr8:66649854(-) T-C intron -    22484847
chr8:66649865(-) A-G intron -    22484847
chr8:66649882(-) A-G intron -    22484847
chr8:66649886(-) A-G intron -    22484847
chr8:66649891(-) A-G intron -    22484847
chr8:66649895(-) T-C intron -    22484847
chr8:66649918(-) A-G intron -    22484847
chr8:66649922(-) A-G intron -    22484847
chr8:66649924(-) A-G intron -    22484847
chr8:66649928(-) T-C intron -    22484847
chr8:66649930(-) A-G intron -    22484847
chr8:66649932(-) A-G intron -    22484847
chr8:66649933(-) A-G intron -    22484847
chr8:66649936(-) A-G intron -    22484847
chr8:66649973(-) A-G intron -    22484847
chr8:66649991(-) A-G intron -    22484847
chr8:66649997(-) T-G intron -    22484847
chr8:66650000(-) A-G intron -    22484847
chr8:66650004(-) A-G intron -    22484847
chr8:66650027(-) A-G intron -    22484847
chr8:66650035(-) A-G intron -    22484847
chr8:66650797(-) A-G intron -    22484847
chr8:66650802(-) A-G intron -    22484847
chr8:66650927(-) G-A intron -    22484847
chr8:66650935(-) A-G intron -    22484847
chr8:66650940(-) A-G intron -    22484847
chr8:66650941(-) A-G intron -    22484847
chr8:66666710(-) A-G intron -    22484847
chr8:66666711(-) A-G intron -    22484847
chr8:66666766(-) A-G intron -    22484847
chr8:66666967(-) A-G intron -    22484847
chr8:66667034(-) A-G intron -    22484847
chr8:66667056(-) A-G intron -    22484847
chr8:66667088(-) A-G intron -    22484847
chr8:66668147(-) A-G intron -    22484847
chr8:66669916(-) A-G intron -    22484847
chr8:66669921(-) A-G intron -    22484847
chr8:66669978(-) A-G intron -    22484847
chr8:66670030(-) A-G intron -    22484847
chr8:66670036(-) A-G intron -    22484847
chr8:66670047(-) A-G intron -    22484847
chr8:66672363(-) A-G intron -    22484847
chr8:66672366(-) A-G intron -    22484847
chr8:66672391(-) A-G intron -    22484847
chr8:66672406(-) A-G intron -    22484847
chr8:66672431(-) A-G intron -    22484847
chr8:66672459(-) A-G intron -    22484847
chr8:66700023(-) C-T intron -    22484847
chr8:66724447(-) C-T intron -    22484847
chr8:66727280(-) A-G intron -    22484847
chr8:66727314(-) A-T intron -    22484847
chr8:66727315(-) G-T intron -    22484847
chr8:66730254(-) A-G intron -    22484847
chr8:66730260(-) A-G intron -    22484847
chr8:66731457(-) A-G intron -    22484847
chr8:66731511(-) A-G intron -    22484847
chr8:66731550(-) A-G intron -    22484847
chr8:66732474(-) A-G intron -    22484847
chr8:66732519(-) A-G intron -    22484847
chr8:66732545(-) A-G intron -    22484847
chr8:66732569(-) A-G intron -    22484847
chr8:66732579(-) A-G intron -    22484847
chr8:66732597(-) A-G intron -    22484847
chr8:66732617(-) A-G intron -    22484847
chr8:66732903(-) A-G intron -    22484847
chr8:66732910(-) A-G intron -    22484847
chr8:66732953(-) A-G intron -    22484847
chr8:66732979(-) A-G intron -    22484847
chr8:66733003(-) A-G intron -    22484847
chr8:66733004(-) A-G intron -    22484847
chr8:66733028(-) A-G intron -    22484847
chr8:66733052(-) A-G intron -    22484847
chr8:66733057(-) A-G intron -    22484847
chr8:66746075(-) A-G intron -    22484847
chr8:66746077(-) A-G intron -    22484847
chr8:66746155(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase PDE7A
chr8:66630191-66630192(-) m6A 3'UTR       26404942
chr8:66630198-66630199(-) m6A 3'UTR       26404942
chr8:66630209-66630210(-) m6A 3'UTR       26404942
chr8:66630222-66630223(-) m6A 3'UTR       26404942
chr8:66630238-66630239(-) m6A 3'UTR       26404942
chr8:66630771-66630772(-) m6A 3'UTR       27773535
chr8:66630875-66630876(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085
chr8:66630965-66630966(-) m6A 3'UTR       24284625//24209618//24981863//28052920//27773535//27371828//22575960//22608085
chr8:66630972-66630973(-) m6A 3'UTR       24284625//24209618//24981863//28052920//27773535//27371828//22575960//22608085
chr8:66630989-66630990(-) m6A 3'UTR       24284625//24209618//24981863//28052920//27773535//27371828//22575960//22608085
chr8:66630998-66630999(-) m6A 3'UTR       24284625//24209618//24981863//28052920//27773535//27371828//22575960//22608085
chr8:66631064-66631065(-) m6A 3'UTR       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22608085
chr8:66631197-66631198(-) m6A 3'UTR       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr8:66631303-66631304(-) m6A 3'UTR       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr8:66631337-66631338(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr8:66631343-66631344(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr8:66631363-66631364(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr8:66631450-66631451(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr8:66631506-66631507(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr8:66631515-66631516(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr8:66631561-66631562(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr8:66631585-66631586(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr8:66631602-66631603(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr8:66631614-66631615(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr8:66631647-66631648(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr8:66631658-66631659(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr8:66634070-66634071(-) m6A 3'UTR//intron       24284625//24981863//27773535//22575960//22608085
chr8:66634139-66634140(-) m6A 3'UTR//intron       27773535
chr8:66637026-66637027(-) m6A CDS       27773535
chr8:66637032-66637033(-) m6A CDS       27773535
chr8:66637039-66637040(-) m6A CDS       27773535
chr8:66754096-66754097(-) m6A 5'UTR//exon//intron       24284625
chr8:66754442-66754443(-) m6A exon       25456834
chr8:66754511-66754512(-) m6A exon       25456834

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-30a-3p
Exosome Brain tissue     23382797
Exosome Plasma     23663360
Exosome Breast milk|Endothelial cells|Epithelial cells|Tongue tissue     -
Microvesicle Seminal plasma     23539611
Microvesicle Follicular fluid     23666971
Microvesicle Serum     24797360
Microvesicle Fibroblasts|Mesenchymal stem cells|Urine     -
Mitochondrion Skeletal muscle myoblasts     21637849
Mitochondrion Cell line (HEK-293|HeLa)     22984580
PDE7A
Chromatin K562 cells     -
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Related Drug Information:


Resource Symbol Drug Name PubChem
ID
Function Link  
RNAInter hsa-miR-30a-3p
Sorafenib 216239 Drug interaction    RC00000903
Resource Symbol Drug Name PubChem ID PMID
NoncoRNA hsa-miR-30a-3p

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-30a-3p
Interactor2: PDE7A

Evidence Support:


Weak-Evidence PAR-CLIP
Support Database ViRBase

References:


PMID 22291592 Target region 3'UTR
Source ViRBase Interactor1 expression None
Tissue or cell line EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells Interactor2 expression None
Description We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.

Starting a new search, please wait ...