Basic Information:

  VIRBase ID:  

HHID00035721

  Virus:  

Gallid alphaherpesvirus 2

  Host:  

Gallus gallus

  Confidence Score:  

0.5711

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      gga-miR-1808:  MIMAT0007726          CSNK2A2:  NM_001012691     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	gga-miR-1808	CSNK2A2
miRBase Accession/Entrez ID	MIMAT0007726	415626
Organism	Gallus gallus	Gallus gallus
Category	miRNA	mRNA
Alias	-	-

Interaction Network (The top 100 interactions):

Interactor1: gga-miR-1808
Interactor2: CSNK2A2

Evidence Support:

Weak-Evidence	PAR-CLIP
Prediction-Evidence	PARalyzer
Support Database	ViRBase

References:

PMID	24449754	Target region	CDS
Source	ViRBase	Interactor1 expression	None
Tissue or cell line	MSB1 cells	Interactor2 expression	None
Description	A list of all RISC binding clusters identified, with their predicted miRNAs, is given in Table S1 in the supplemental material. Of these 16,585 binding clusters, PARalyzer predicted 1, 104 cellular mRNAs that were bound by one or more MDV-1 miRNAs, while 1, 183 cellular mRNAs were predicted to be bound by one or more MDV-2 miRNAs.