Detail Information

Basic Information:


  VIRBase ID:  

HHID00026292

  Virus:  

Hantaan orthohantavirus (Hantaan virus 76-118)

  Host:  

Homo sapiens

  Confidence Score:  

0.6040

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-1343-3p:           CFLAR:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-1343-3p CFLAR
miRBase
Accession/Entrez ID
MIMAT0019776 8837
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - c-FLIP//c-FLIPL//c-FLIPR//c-FLIPS//CASH//CASP8AP1//Casper//cFLIP//CLARP//FLAME//FLAME-1//FLAME1//FLIP//I-FLICE//MRIT

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-1343-3p
rs1030024806 chr11:34941897    C/T
rs1228966720 chr11:34941904    T/G
rs1335261302 chr11:34941900    G/A
rs568333985 chr11:34941898    C/G
rs748356067 chr11:34941908    G/A
rs950497159 chr11:34941907    C/T

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR CFLAR
chr2:201998867(+) A-I      intronic
chr2:202028774(+) A-I      3'UTR
chr2:202011090(+) A-I      intronic
chr2:202015185(+) A-I      intronic
chr2:201989267(+) A-I      intronic
chr2:201998913(+) A-I      intronic
chr2:202008080(+) A-I      intronic
chr2:202008617(+) A-I      intronic
chr2:201998886(+) A-I      intronic
chr2:201998870(+) A-I      intronic
chr2:201998918(+) A-I      intronic
chr2:201998922(+) A-I      intronic
chr2:202010789(+) A-I      intronic
chr2:201998940(+) A-I      intronic
chr2:202011050(+) A-I      intronic
chr2:202011092(+) A-I      intronic
chr2:202029010(+) A-I      3'UTR
chr2:202029005(+) A-I      3'UTR
chr2:202029004(+) A-I      3'UTR
chr2:202028987(+) A-I      3'UTR
chr2:202028966(+) A-I      3'UTR
chr2:202011104(+) A-I      intronic
chr2:202012101(+) A-I      intronic
chr2:202028802(+) A-I      3'UTR
chr2:202015110(+) A-I      intronic
chr2:202028790(+) A-I      3'UTR
chr2:202028782(+) A-I      3'UTR
chr2:202015134(+) A-I      intronic
chr2:202020005(+) A-I      intronic
chr2:202020045(+) A-I      intronic
chr2:202020069(+) A-I      intronic
chr2:201998795(+) A-I      intronic
chr2:202020117(+) A-I      intronic
chr2:202020261(+) A-I      intronic
chr2:202020393(+) A-I      intronic
chr2:202020433(+) A-I      intronic
chr2:202020451(+) A-I      intronic
chr2:202020464(+) A-I      intronic
chr2:202020473(+) A-I      intronic
chr2:202020476(+) A-I      intronic
chr2:202020482(+) A-I      intronic
chr2:202020483(+) A-I      intronic
chr2:202020492(+) A-I      intronic
chr2:202020545(+) A-I      intronic
chr2:202020568(+) A-I      intronic
chr2:201992116(+) A-I      intronic
chr2:201992149(+) A-I      intronic
chr2:201992155(+) A-I      intronic
chr2:201992158(+) A-I      intronic
chr2:201992196(+) A-I      intronic
chr2:201998421(+) A-I      intronic
chr2:201998434(+) A-I      intronic
chr2:201998468(+) A-I      intronic
chr2:201998501(+) A-I      intronic
chr2:202020691(+) A-I      intronic
chr2:201998507(+) A-I      intronic
chr2:201998561(+) A-I      intronic
chr2:201998639(+) A-I      intronic
chr2:201998768(+) A-I      intronic
chr2:201998777(+) A-I      intronic
chr2:201998817(+) A-I      intronic
chr2:201998823(+) A-I      intronic
chr2:201998837(+) A-I      intronic
chr2:201998855(+) A-I      intronic
chr2:201998873(+) A-I      intronic
chr2:201998881(+) A-I      intronic
chr2:201998902(+) A-I      intronic
chr2:202007596(+) A-I      intronic
chr2:202007933(+) A-I      intronic
chr2:202007943(+) A-I      intronic
chr2:202007972(+) A-I      intronic
chr2:202007985(+) A-I      intronic
chr2:202006906(+) A-I      intronic
chr2:202006986(+) A-I      intronic
chr2:202018683(+) A-I      intronic
chr2:202007343(+) A-I      intronic
chr2:202007366(+) A-I      intronic
chr2:202007583(+) A-I      intronic
chr2:202008035(+) A-I      intronic
chr2:202008036(+) A-I      intronic
chr2:202008037(+) A-I      intronic
chr2:202008038(+) A-I      intronic
chr2:202008052(+) A-I      intronic
chr2:202008074(+) A-I      intronic
chr2:202008107(+) A-I      intronic
chr2:202008140(+) A-I      intronic
chr2:202008147(+) A-I      intronic
chr2:202008175(+) A-I      intronic
chr2:202008413(+) A-I      intronic
chr2:202008431(+) A-I      intronic
chr2:202008432(+) A-I      intronic
chr2:202008458(+) A-I      intronic
chr2:202008483(+) A-I      intronic
chr2:202008489(+) A-I      intronic
chr2:202009773(+) A-I      intronic
chr2:202006847(+) A-I      intronic
chr2:202006839(+) A-I      intronic
chr2:202006834(+) A-I      intronic
chr2:202006735(+) A-I      intronic
chr2:202005941(+) A-I      intronic
chr2:202005899(+) A-I      intronic
chr2:202005861(+) A-I      intronic
chr2:202008509(+) A-I      intronic
chr2:202005835(+) A-I      intronic
chr2:202005834(+) A-I      intronic
chr2:202005832(+) A-I      intronic
chr2:202005824(+) A-I      intronic
chr2:202005812(+) A-I      intronic
chr2:202005808(+) A-I      intronic
chr2:202005804(+) A-I      intronic
chr2:202005803(+) A-I      intronic
chr2:202005799(+) A-I      intronic
chr2:202008520(+) A-I      intronic
chr2:202008542(+) A-I      intronic
chr2:202008548(+) A-I      intronic
chr2:202008554(+) A-I      intronic
chr2:202008562(+) A-I      intronic
chr2:202008565(+) A-I      intronic
chr2:202008574(+) A-I      intronic
chr2:202008597(+) A-I      intronic
chr2:202008600(+) A-I      intronic
chr2:202008605(+) A-I      intronic
chr2:202008606(+) A-I      intronic
chr2:202008610(+) A-I      intronic
chr2:202009606(+) A-I      intronic
chr2:202009632(+) A-I      intronic
chr2:202009656(+) A-I      intronic
chr2:202009669(+) A-I      intronic
chr2:202009675(+) A-I      intronic
chr2:202009705(+) A-I      intronic
chr2:202009717(+) A-I      intronic
chr2:202009728(+) A-I      intronic
chr2:202009737(+) A-I      intronic
chr2:202009750(+) A-I      intronic
chr2:202009756(+) A-I      intronic
chr2:202009798(+) A-I      intronic
chr2:201999001(+) A-I      intronic
chr2:202026211(+) A-I      intronic
chr2:202026201(+) A-I      intronic
chr2:202026187(+) A-I      intronic
chr2:202026076(+) A-I      intronic
chr2:202026073(+) A-I      intronic
chr2:202009810(+) A-I      intronic
chr2:202009831(+) A-I      intronic
chr2:202009850(+) A-I      intronic
chr2:202010709(+) A-I      intronic
chr2:202010784(+) A-I      intronic
chr2:202010790(+) A-I      intronic
chr2:202010793(+) A-I      intronic
chr2:202010807(+) A-I      intronic
chr2:202010829(+) A-I      intronic
chr2:202010944(+) A-I      intronic
chr2:202005793(+) A-I      intronic
chr2:202024307(+) A-I      intronic
chr2:202024216(+) A-I      intronic
chr2:202010950(+) A-I      intronic
chr2:202010987(+) A-I      intronic
chr2:202011009(+) A-I      intronic
chr2:202011031(+) A-I      intronic
chr2:202011036(+) A-I      intronic
chr2:202024213(+) A-I      intronic
chr2:202024162(+) A-I      intronic
chr2:202005792(+) A-I      intronic
chr2:202005789(+) A-I      intronic
chr2:202005778(+) A-I      intronic
chr2:202011091(+) A-I      intronic
chr2:202011226(+) A-I      intronic
chr2:202011241(+) A-I      intronic
chr2:202011244(+) A-I      intronic
chr2:202011245(+) A-I      intronic
chr2:202005768(+) A-I      intronic
chr2:202005753(+) A-I      intronic
chr2:202011279(+) A-I      intronic
chr2:202011996(+) A-I      intronic
chr2:202005744(+) A-I      intronic
chr2:202005698(+) A-I      intronic
chr2:202000514(+) A-I      intronic
chr2:202000505(+) A-I      intronic
chr2:202000453(+) A-I      intronic
chr2:202000427(+) A-I      intronic
chr2:201999353(+) A-I      intronic
chr2:201999308(+) A-I      intronic
chr2:201999303(+) A-I      intronic
chr2:201999290(+) A-I      intronic
chr2:202008591(+) A-I      intronic
chr2:201999180(+) A-I      intronic
chr2:201999156(+) A-I      intronic
chr2:202020744(+) A-I      intronic
chr2:202020622(+) A-I      intronic
chr2:202020619(+) A-I      intronic
chr2:202000550(+) A-I      intronic
chr2:202006852(+) A-I      intronic
chr2:202012032(+) A-I      intronic
chr2:202012042(+) A-I      intronic
chr2:202012074(+) A-I      intronic
chr2:202012105(+) A-I      intronic
chr2:202012137(+) A-I      intronic
chr2:202012141(+) A-I      intronic
chr2:202012173(+) A-I      intronic
chr2:202012239(+) A-I      intronic
chr2:202014797(+) A-I      intronic
chr2:202014809(+) A-I      intronic
chr2:202014812(+) A-I      intronic
chr2:202014871(+) A-I      intronic
chr2:202014881(+) A-I      intronic
chr2:202014892(+) A-I      intronic
chr2:202014895(+) A-I      intronic
chr2:202014897(+) A-I      intronic
chr2:202014898(+) A-I      intronic
chr2:202014905(+) A-I      intronic
chr2:202014906(+) A-I      intronic
chr2:202014910(+) A-I      intronic
chr2:202014946(+) A-I      intronic
chr2:202014969(+) A-I      intronic
chr2:202015007(+) A-I      intronic
chr2:202015039(+) A-I      intronic
chr2:202015041(+) A-I      intronic
chr2:202015044(+) A-I      intronic
chr2:202015045(+) A-I      intronic
chr2:202015139(+) A-I      intronic
chr2:202015145(+) A-I      intronic
chr2:202015153(+) A-I      intronic
chr2:202015154(+) A-I      intronic
chr2:202015207(+) A-I      intronic
chr2:202016760(+) A-I      intronic
chr2:202016814(+) A-I      intronic
chr2:202016883(+) A-I      intronic
chr2:202016903(+) A-I      intronic
chr2:202016915(+) A-I      intronic
chr2:202017009(+) A-I      intronic
chr2:202018654(+) A-I      intronic
chr2:202018678(+) A-I      intronic
chr2:202018691(+) A-I      intronic
chr2:201999211(+) A-I      intronic
chr2:202028873(+) A-I      3'UTR
chr2:202028739(+) A-I      3'UTR
chr2:202028978(+) A-I      3'UTR
chr2:202028769(+) A-I      3'UTR
chr2:202029016(+) A-I      3'UTR
chr2:202011053(+) A-I      intronic
chr2:202014901(+) A-I      intronic
chr2:202006918(+) A-I      intronic
chr2:202007505(+) A-I      intronic
chr2:202007584(+) A-I      intronic
chr2:202026943(+) A-I      intronic
chr2:202008110(+) A-I      intronic
chr2:201998475(+) A-I      intronic
chr2:201998504(+) A-I      intronic
chr2:201982579(+) A-I      intronic
chr2:202014904(+) A-I      intronic
chr2:202007494(+) A-I      intronic
chr2:201989126(+) A-I      intronic
chr2:202007556(+) A-I      intronic
chr2:202000489(+) A-I      intronic
chr2:202000585(+) A-I      intronic
chr2:202025971(+) A-I      intronic
chr2:202006789(+) A-I      intronic
chr2:202007509(+) A-I      intronic
chr2:202020410(+) A-I      intronic
chr2:202023869(+) A-I      intronic
chr2:202026240(+) A-I      intronic
chr2:202026888(+) A-I      intronic
chr2:202006840(+) A-I      intronic
chr2:202020450(+) A-I      intronic
chr2:202007496(+) A-I      intronic
chr2:202000602(+) A-I      intronic
chr2:201992190(+) A-I      intronic
chr2:202026906(+) A-I      intronic
chr2:202012131(+) A-I      intronic
chr2:202020063(+) A-I      intronic
chr2:201992122(+) A-I      intronic
chr2:202026406(+) A-I      intronic
chr2:202026003(+) A-I      intronic
chr2:202009759(+) A-I      intronic
chr2:201989293(+) A-I      intronic
chr2:202020127(+) A-I      intronic
chr2:201998910(+) A-I      intronic
chr2:202018728(+) A-I      intronic
chr2:202006841(+) A-I      intronic
chr2:202024133(+) A-I      intronic
chr2:202026254(+) A-I      intronic
chr2:202008101(+) A-I      intronic
chr2:202026877(+) A-I      intronic
chr2:202018692(+) A-I      intronic
chr2:201999019(+) A-I      intronic
chr2:202025980(+) A-I      intronic
chr2:202028836(+) A-I      3'UTR
chr2:202028717(+) A-I      3'UTR
chr2:202028841(+) A-I      3'UTR
chr2:202028835(+) A-I      3'UTR
chr2:202028811(+) A-I      3'UTR
chr2:202028884(+) A-I      3'UTR
chr2:202028810(+) A-I      3'UTR
chr2:202028877(+) A-I      3'UTR
chr2:202028837(+) A-I      3'UTR
chr2:202028826(+) A-I      3'UTR
chr2:202028861(+) A-I      3'UTR
chr2:202028756(+) A-I      3'UTR
chr2:202028829(+) A-I      3'UTR
chr2:202028897(+) A-I      3'UTR
chr2:202028803(+) A-I      3'UTR
chr2:202028827(+) A-I      3'UTR
chr2:202028755(+) A-I      3'UTR
chr2:202028759(+) A-I      3'UTR
chr2:202028725(+) A-I      3'UTR
chr2:202028832(+) A-I      3'UTR
chr2:202028779(+) A-I      3'UTR
chr2:202028764(+) A-I      3'UTR
chr2:202028867(+) A-I      3'UTR
chr2:202028838(+) A-I      3'UTR
chr2:202028909(+) A-I      3'UTR
chr2:202028734(+) A-I      3'UTR
chr2:202028733(+) A-I      3'UTR
chr2:202020447(+) A-I      intronic
chr2:202025979(+) A-I      intronic
chr2:202020459(+) A-I      intronic
chr2:201989258(+) A-I      intronic
chr2:201999247(+) A-I      intronic
chr2:201998879(+) A-I      intronic
chr2:202008499(+) A-I      intronic
chr2:202026133(+) A-I      intronic
chr2:201998912(+) A-I      intronic
chr2:202009645(+) A-I      intronic
chr2:202025995(+) A-I      intronic
chr2:201998976(+) A-I      intronic
chr2:201998883(+) A-I      intronic
chr2:202006743(+) A-I      intronic
chr2:202016809(+) A-I      intronic
chr2:202026237(+) A-I      intronic
chr2:202026014(+) A-I      intronic
chr2:202026051(+) A-I      intronic
chr2:202026111(+) A-I      intronic
chr2:202026156(+) A-I      intronic
chr2:202000534(+) A-I      intronic
chr2:201998604(+) A-I      intronic
chr2:201998420(+) A-I      intronic
chr2:202005896(+) A-I      intronic
chr2:201998474(+) A-I      intronic
chr2:201996040(+) A-I      intronic
chr2:201999208(+) A-I      intronic
chr2:202020595(+) A-I      intronic
chr2:202007345(+) A-I      intronic
chr2:202006803(+) A-I      intronic
chr2:202000460(+) A-I      intronic
chr2:202010767(+) A-I      intronic
chr2:202009785(+) A-I      intronic
chr2:202020421(+) A-I      intronic
chr2:202009680(+) A-I      intronic
chr2:202000448(+) A-I      intronic
chr2:202012234(+) A-I      intronic
chr2:201998927(+) A-I      intronic
chr2:202000532(+) A-I      intronic
chr2:202000584(+) A-I      intronic
chr2:202020044(+) A-I      intronic
chr2:202025947(+) A-I      intronic
chr2:202000624(+) A-I      intronic
chr2:202008538(+) A-I      intronic
chr2:201999193(+) A-I      intronic
chr2:202026278(+) A-I      intronic
chr2:202006771(+) A-I      intronic
chr2:201998399(+) A-I      intronic
chr2:201998776(+) A-I      intronic
chr2:202020105(+) A-I      intronic
chr2:201989151(+) A-I      intronic
chr2:202026217(+) A-I      intronic
chr2:202006744(+) A-I      intronic
chr2:201999237(+) A-I      intronic
chr2:201992139(+) A-I      intronic
chr2:202016810(+) A-I      intronic
chr2:202011983(+) A-I      intronic
chr2:202018722(+) A-I      intronic
chr2:201989320(+) A-I      intronic
chr2:202020411(+) A-I      intronic
chr2:201982618(+) A-I      intronic
chr2:202012050(+) A-I      intronic
chr2:202009619(+) A-I      intronic
chr2:202000449(+) A-I      intronic
chr2:201998880(+) A-I      intronic
chr2:202009693(+) A-I      intronic
chr2:201999018(+) A-I      intronic
chr2:201998812(+) A-I      intronic
chr2:202020383(+) A-I      intronic
chr2:202020669(+) A-I      intronic
chr2:202009715(+) A-I      intronic
chr2:202026390(+) A-I      intronic
chr2:202009837(+) A-I      intronic
chr2:202006770(+) A-I      intronic
chr2:202007976(+) A-I      intronic
chr2:202015170(+) A-I      intronic
chr2:202006876(+) A-I      intronic
chr2:201998924(+) A-I      intronic
chr2:202000509(+) A-I      intronic
chr2:201982535(+) A-I      intronic
chr2:202007574(+) A-I      intronic
chr2:201999143(+) A-I      intronic
chr2:202008075(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED CFLAR
chr2:202006743(+) A-I intron -    15258596
chr2:202006744(+) A-I intron -    15258596
chr2:202006770(+) A-I intron -    15258596
chr2:202006771(+) A-I intron -    15258596
chr2:202006789(+) A-I intron -    15258596
chr2:202006803(+) A-I intron -    15258596
chr2:202014803(+) A-I intron -    15258596
chr2:202014804(+) A-I intron -    15258596
chr2:202014855(+) A-I intron -    15258596
chr2:202014861(+) A-I intron -    15258596
chr2:202028733(+) A-I exon 3'UTR    15258596   //16100382
chr2:202028734(+) A-I exon 3'UTR    15258596   //16100382
chr2:202028755(+) A-I exon 3'UTR    15258596
chr2:202028779(+) A-I exon 3'UTR    15258596
chr2:202028803(+) A-I exon 3'UTR    15258596   //22327324
chr2:202028810(+) A-I exon 3'UTR    15258596   //16100382
chr2:202028811(+) A-I exon 3'UTR    15258596   //16100382
chr2:202028832(+) A-I exon 3'UTR    15258596   //21960545
chr2:202030009(+) A-I exon 3'UTR    15258596
chr2:202030025(+) A-I exon 3'UTR    15258596
chr2:202030094(+) A-I exon 3'UTR    15258596   //22327324
chr2:202030111(+) A-I exon 3'UTR    15258596
chr2:202030257(+) A-I exon 3'UTR    15258596   //22327324
chr2:202000509(+) A-I intron -    21960545   //22327324
chr2:202008110(+) A-I intron -    22327324
chr2:202020537(+) A-I intron -    22327324
chr2:202028828(+) A-I intron -    22327324
chr2:202028830(+) A-I intron -    22327324
chr2:202031979(+) A-I intron -    22327324
chr2:202028827(+) A-I intron -    21960545
chr2:202000376(+) A-I intron -    21960545
chr2:202028867(+) A-G intron -    21725310   //22484847
chr2:201984741(+) C-T intron -    22484847
chr2:201984746(+) C-T intron -    22484847
chr2:201985011(+) T-C intron -    22484847
chr2:201989258(+) A-G intron -    22484847
chr2:201989318(+) A-G intron -    22484847
chr2:201995206(+) T-C intron -    22484847
chr2:201998420(+) A-G intron -    22484847
chr2:201998471(+) G-C intron -    22484847
chr2:201998474(+) A-G intron -    22484847
chr2:201998475(+) A-G intron -    22484847
chr2:201998533(+) A-G intron -    22484847
chr2:201998812(+) A-G intron -    22484847
chr2:201998879(+) A-G intron -    22484847
chr2:201998880(+) A-G intron -    22484847
chr2:201998882(+) A-G intron -    22484847
chr2:201998883(+) A-G intron -    22484847
chr2:201998912(+) A-G intron -    22484847
chr2:201998976(+) A-G intron -    22484847
chr2:201999018(+) A-G intron -    22484847
chr2:201999143(+) A-G intron -    22484847
chr2:201999208(+) A-G intron -    22484847
chr2:201999237(+) A-G intron -    22484847
chr2:202000376(+) A-G intron -    22484847
chr2:202000448(+) A-G intron -    22484847
chr2:202000449(+) A-G intron -    22484847
chr2:202000477(+) A-G intron -    22484847
chr2:202000487(+) A-G intron -    22484847
chr2:202000584(+) A-G intron -    22484847
chr2:202000585(+) A-G intron -    22484847
chr2:202000588(+) A-G intron -    22484847
chr2:202023869(+) A-G intron -    22484847
chr2:202024071(+) T-C intron -    22484847
chr2:202024133(+) A-G intron -    22484847
chr2:202025971(+) A-G intron -    22484847
chr2:202025973(+) A-G intron -    22484847
chr2:202025980(+) A-G intron -    22484847
chr2:202025995(+) A-G intron -    22484847
chr2:202025996(+) A-G intron -    22484847
chr2:202026230(+) A-G intron -    22484847
chr2:202026240(+) A-G intron -    22484847
chr2:202026254(+) A-G intron -    22484847
chr2:202026390(+) A-G intron -    22484847
chr2:202026406(+) A-G intron -    22484847
chr2:202028717(+) A-G intron -    22484847
chr2:202028725(+) A-G intron -    22484847
chr2:202028727(+) A-G intron -    22484847
chr2:202028733(+) A-G intron -    22484847
chr2:202028734(+) A-G intron -    22484847
chr2:202028749(+) G-A intron -    22484847
chr2:202028755(+) A-G intron -    22484847
chr2:202028764(+) A-G intron -    22484847
chr2:202028803(+) A-G intron -    22484847
chr2:202028810(+) A-G intron -    22484847
chr2:202028811(+) A-G intron -    22484847
chr2:202028823(+) A-G intron -    22484847
chr2:202028826(+) A-G intron -    22484847
chr2:202028827(+) A-G intron -    22484847
chr2:202028828(+) A-G intron -    22484847
chr2:202028830(+) A-G intron -    22484847
chr2:202028832(+) A-G intron -    22484847
chr2:202028835(+) A-G intron -    22484847
chr2:202028836(+) A-G intron -    22484847
chr2:202028841(+) A-G intron -    22484847
chr2:202028861(+) A-G intron -    22484847
chr2:202028877(+) A-G intron -    22484847
chr2:202028890(+) A-G intron -    22484847
chr2:202028998(+) C-A intron -    22484847
chr2:202028999(+) T-A intron -    22484847
chr2:202029000(+) T-A intron -    22484847
chr2:202029001(+) T-A intron -    22484847
chr2:202031965(+) A-G intron -    22484847
chr2:202031969(+) A-G intron -    22484847
chr2:202031979(+) T-C intron -    22484847
chr2:202031987(+) G-A intron -    22484847
chr2:202032045(+) A-G intron -    22484847
chr2:202032075(+) A-G intron -    22484847
chr2:202032081(+) A-G intron -    22484847
chr2:202032086(+) A-G intron -    22484847
chr2:202032107(+) A-G intron -    22484847
chr2:202032111(+) C-T intron -    22484847
chr2:202032131(+) A-G intron -    22484847
chr2:202032186(+) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase CFLAR
chr2:201980845-201980846(+) m6A 5'UTR       24981863
chr2:201980905-201980906(+) m6A 5'UTR       24284625//24981863//22608085
chr2:201980948-201980949(+) m6A 5'UTR       24284625//24209618//24981863//22608085
chr2:201980970-201980971(+) m6A 5'UTR       24284625//24209618//24981863//22608085
chr2:201981003-201981004(+) m6A 5'UTR       24284625//24209618//24981863//22608085
chr2:201981026-201981027(+) m6A 5'UTR       24284625//24209618//24981863//22608085
chr2:201981035-201981036(+) m6A 5'UTR       24284625//24209618//24981863//22608085
chr2:201981070-201981071(+) m6A 5'UTR       24284625//24209618//24981863//22608085
chr2:201981587-201981588(+) m6A 5'UTR//intron       24209618//24981863//22608085
chr2:201981596-201981597(+) m6A 5'UTR//intron       24209618//24981863//22608085
chr2:201981787-201981788(+) m6A 5'UTR//intron       24209618//24981863
chr2:201983299-201983300(+) m6A 5'UTR//exon//intron       24981863
chr2:201983355-201983356(+) m6A 5'UTR//exon//intron       24981863
chr2:201983771-201983772(+) m6A exon//intron       24981863
chr2:201983818-201983819(+) m6A exon//intron       24981863
chr2:201983886-201983887(+) m6A exon//intron       24981863
chr2:201994556-201994557(+) m6A 5'UTR//exon//intron       24284625//24209618
chr2:201994703-201994704(+) m6A CDS//exon//intron       24284625//24209618//24981863//26404942//27773535//22608085
chr2:201994748-201994749(+) m6A CDS//exon//intron       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr2:201994758-201994759(+) m6A CDS//exon//intron       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr2:201994811-201994812(+) m6A CDS//exon//intron       24284625//24209618//24981863//26404942//22608085
chr2:201994828-201994829(+) m6A CDS//exon//intron       24284625//24209618//24981863//22608085
chr2:201994844-201994845(+) m6A CDS//exon//intron       24284625//24209618//24981863//22608085
chr2:201994862-201994863(+) m6A CDS//exon//intron       24284625//24209618//24981863//22608085
chr2:201997507-201997508(+) m6A 5'UTR//intron       24284625//24209618//24981863//22608085
chr2:201997709-201997710(+) m6A 5'UTR//intron       -
chr2:201997734-201997735(+) m6A 5'UTR//intron       -
chr2:202000704-202000705(+) m6A CDS//exon       -
chr2:202001122-202001123(+) m6A CDS//exon//intron       24209618//24981863//26404942//22608085
chr2:202001150-202001151(+) m6A 3'UTR//intron       24209618//24981863//22608085
chr2:202001255-202001256(+) m6A 3'UTR//intron       24284625//24209618//24981863
chr2:202001303-202001304(+) m6A 3'UTR//intron       24284625//24209618//24981863
chr2:202001355-202001356(+) m6A 3'UTR//intron       24284625//24209618//24981863
chr2:202001429-202001430(+) m6A 3'UTR//intron       24284625//24981863//26404942
chr2:202001494-202001495(+) m6A 3'UTR//intron       24981863//26404942
chr2:202001531-202001532(+) m6A 3'UTR//intron       24981863//26404942
chr2:202001706-202001707(+) m6A 3'UTR//intron       24981863
chr2:202001731-202001732(+) m6A 3'UTR//intron       -
chr2:202001768-202001769(+) m6A 3'UTR//intron       -
chr2:202001881-202001882(+) m6A 3'UTR//intron       24209618
chr2:202001967-202001968(+) m6A 3'UTR//intron       24209618
chr2:202002087-202002088(+) m6A 3'UTR//intron       24981863
chr2:202002133-202002134(+) m6A 3'UTR//intron       24284625//24981863
chr2:202002154-202002155(+) m6A 3'UTR//intron       24284625//24209618//24981863
chr2:202002192-202002193(+) m6A 3'UTR//intron       24284625//24209618//24981863//22608085
chr2:202002315-202002316(+) m6A 3'UTR//intron       24284625//24209618//24981863//22575960//22608085
chr2:202002342-202002343(+) m6A 3'UTR//intron       24284625//24209618//24981863//22575960//22608085
chr2:202002350-202002351(+) m6A 3'UTR//intron       24284625//24209618//24981863//22575960//22608085
chr2:202002417-202002418(+) m6A 3'UTR//intron       24284625//24209618//24981863//22575960//22608085
chr2:202002429-202002430(+) m6A 3'UTR//intron       24284625//24209618//24981863//22575960//22608085
chr2:202002455-202002456(+) m6A 3'UTR//intron       24284625//24209618//24981863//22575960//22608085
chr2:202003452-202003453(+) m6A 3'UTR//intron       24284625//24209618//24981863//22608085
chr2:202003485-202003486(+) m6A 3'UTR//intron       24284625//24209618//24981863//22608085
chr2:202003513-202003514(+) m6A 3'UTR//intron       24284625//24209618//24981863//22608085
chr2:202025271-202025272(+) m6A CDS//exon       24981863
chr2:202025339-202025340(+) m6A CDS//exon       24981863//26404942//22608085
chr2:202025436-202025437(+) m6A CDS//exon       24981863//26404942//22608085
chr2:202025466-202025467(+) m6A CDS//exon       24284625//24209618//24981863//26404942//22608085
chr2:202025586-202025587(+) m6A CDS//exon       24284625//24981863//22608085
chr2:202025650-202025651(+) m6A CDS//exon       24284625//24981863//22608085
chr2:202025656-202025657(+) m6A CDS//exon       24284625//24981863//22608085
chr2:202027722-202027723(+) m6A CDS//intron       24284625//24981863//22608085
chr2:202027756-202027757(+) m6A CDS//intron       24981863
chr2:202028587-202028588(+) m6A CDS//exon       24284625//24981863//22608085
chr2:202028613-202028614(+) m6A CDS//exon       24284625//24981863//22608085
chr2:202028674-202028675(+) m6A CDS//exon       24284625//24209618//24981863//26404942//22608085
chr2:202028699-202028700(+) m6A 3'UTR       24284625//24209618//24981863//22608085
chr2:202028789-202028790(+) m6A 3'UTR       24981863
chr2:202029667-202029668(+) m6A 3'UTR       -
chr2:202030375-202030376(+) m6A 3'UTR       -
chr2:202030585-202030586(+) m6A 3'UTR       -
chr2:202030674-202030675(+) m6A 3'UTR       -
chr2:202031420-202031421(+) m6A 3'UTR       24209618//24981863
chr2:202031488-202031489(+) m6A 3'UTR       -
chr2:202031511-202031512(+) m6A 3'UTR       -
chr2:202031539-202031540(+) m6A 3'UTR       -
chr2:202031669-202031670(+) m6A 3'UTR       24981863
chr2:202031897-202031898(+) m6A 3'UTR       24981863
chr2:202031910-202031911(+) m6A 3'UTR       24981863//22608085
chr2:202031999-202032000(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085
chr2:202032027-202032028(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085
chr2:202032050-202032051(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085
chr2:202032071-202032072(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085
chr2:202032208-202032209(+) m6A 3'UTR       24284625//24209618//24981863
chr2:202032218-202032219(+) m6A 3'UTR       24284625//24209618//24981863
chr2:202032248-202032249(+) m6A 3'UTR       24284625//24981863
chr2:202032264-202032265(+) m6A 3'UTR       24284625//24981863
chr2:202032305-202032306(+) m6A 3'UTR       24284625//24981863
chr2:202032464-202032465(+) m6A 3'UTR       24209618
chr2:202032590-202032591(+) m6A 3'UTR       24981863//26404942
chr2:202032885-202032886(+) m6A 3'UTR       24981863
chr2:202033163-202033164(+) m6A 3'UTR       24981863//22608085
chr2:202033174-202033175(+) m6A 3'UTR       24981863//22608085
chr2:202033222-202033223(+) m6A 3'UTR       24981863
chr2:202033277-202033278(+) m6A 3'UTR       24981863
chr2:202033361-202033362(+) m6A 3'UTR       24981863
chr2:202033400-202033401(+) m6A 3'UTR       24981863
chr2:202033437-202033438(+) m6A 3'UTR       24284625//24981863
chr2:202033575-202033576(+) m6A 3'UTR       24284625//24981863//22608085
chr2:202033656-202033657(+) m6A 3'UTR       24284625//24981863
chr2:202033663-202033664(+) m6A 3'UTR       24284625//24981863
chr2:202033689-202033690(+) m6A 3'UTR       24981863
chr2:202033703-202033704(+) m6A 3'UTR       24981863
chr2:202033794-202033795(+) m6A 3'UTR       24981863
chr2:202033829-202033830(+) m6A 3'UTR       24981863//27773535
chr2:202033851-202033852(+) m6A 3'UTR       24981863//27773535
chr2:202033877-202033878(+) m6A 3'UTR       24981863//27773535
chr2:202033896-202033897(+) m6A 3'UTR       24981863//27773535
chr2:202033980-202033981(+) m6A 3'UTR       24284625//24981863//22608085
chr2:202033992-202033993(+) m6A 3'UTR       24284625//24981863//22608085
chr2:202034001-202034002(+) m6A 3'UTR       24284625//24981863//22608085
chr2:202034012-202034013(+) m6A 3'UTR       24284625//24981863//22608085
chr2:202034026-202034027(+) m6A 3'UTR       24284625//24981863//22608085
chr2:202034059-202034060(+) m6A 3'UTR       24284625//24981863//22608085
chr2:202034070-202034071(+) m6A 3'UTR       24284625//24981863//22608085
chr2:202034118-202034119(+) m6A 3'UTR       24284625//24981863//22608085
chr2:202034146-202034147(+) m6A 3'UTR       24284625//24981863//22608085
chr2:202034194-202034195(+) m6A 3'UTR       24981863//22608085
chr2:202034206-202034207(+) m6A 3'UTR       24981863//22608085
chr2:202034213-202034214(+) m6A 3'UTR       24981863//22608085
chr2:202034222-202034223(+) m6A 3'UTR       24981863//22608085
chr2:202034256-202034257(+) m6A 3'UTR       24981863//22608085
chr2:202034288-202034289(+) m6A 3'UTR       24981863//22608085
chr2:202034340-202034341(+) m6A 3'UTR       24981863//22608085
chr2:202034368-202034369(+) m6A 3'UTR       24981863//22608085
chr2:202034384-202034385(+) m6A 3'UTR       24981863//22608085
chr2:202034408-202034409(+) m6A 3'UTR       24981863//22608085
chr2:202034452-202034453(+) m6A 3'UTR       24284625//24981863//22608085
chr2:202034463-202034464(+) m6A 3'UTR       24284625//24981863//22608085
chr2:202034470-202034471(+) m6A 3'UTR       24284625//24981863//22608085
chr2:202034490-202034491(+) m6A 3'UTR       24284625//24981863//22608085
chr2:202034510-202034511(+) m6A 3'UTR       24284625//24981863//22608085
chr2:202034517-202034518(+) m6A 3'UTR       24284625//24981863//22608085
chr2:202034523-202034524(+) m6A 3'UTR       24284625//24981863//22608085
chr2:202034544-202034545(+) m6A 3'UTR       24981863//22608085
chr2:202034563-202034564(+) m6A 3'UTR       24981863//22608085
chr2:202034615-202034616(+) m6A 3'UTR       24981863//22608085
chr2:202034673-202034674(+) m6A 3'UTR       24981863//22608085
chr2:202034708-202034709(+) m6A 3'UTR       24981863//22608085
chr2:202034788-202034789(+) m6A 3'UTR       24284625//24981863//22608085
chr2:202034848-202034849(+) m6A 3'UTR       24284625//24981863//22608085
chr2:202034912-202034913(+) m6A 3'UTR       24284625//24981863//22608085
chr2:202034941-202034942(+) m6A 3'UTR       24284625//24981863//22608085
chr2:202035188-202035189(+) m6A 3'UTR       24981863
chr2:202035743-202035744(+) m6A 3'UTR       24981863//22608085
chr2:202035779-202035780(+) m6A 3'UTR       24981863//22608085
chr2:202035784-202035785(+) m6A 3'UTR       24981863//22608085
chr2:202035855-202035856(+) m6A 3'UTR       24981863//22608085
chr2:202035864-202035865(+) m6A 3'UTR       24981863//22608085
chr2:202036075-202036076(+) m6A 3'UTR       -
chr2:202036110-202036111(+) m6A 3'UTR       -
chr2:202036129-202036130(+) m6A 3'UTR       -
chr2:202036134-202036135(+) m6A 3'UTR       24981863
chr2:202036168-202036169(+) m6A 3'UTR       24981863
chr2:202036177-202036178(+) m6A 3'UTR       24981863
chr2:202036185-202036186(+) m6A 3'UTR       24981863
chr2:202036309-202036310(+) m6A 3'UTR       24981863
chr2:202036320-202036321(+) m6A 3'UTR       24981863
chr2:202036756-202036757(+) m6A 3'UTR       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-1343-3p
Exosome Plasma     23663360
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Fibroblasts|Mesenchymal stem cells     -
CFLAR
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-1343-3p
Interactor2: CFLAR

Evidence Support:


Weak-Evidence RNA-Seq
Prediction-Evidence miRDB//miRTarBase//miRWalk//Targetscan
Support Database ViRBase

References:


PMID 32232013 Target region None
Source ViRBase Interactor1 expression None
Tissue or cell line HUVEC cells Interactor2 expression Upregulation
Description Then we predicted 320 target genes of these 16 DE miRNAs and constructed a miRNA-mRNA interaction network (Figure 5B, Table S5).

Starting a new search, please wait ...