Detail Information

Basic Information:


  VIRBase ID:  

HHID00025978

  Virus:  

Hantaan orthohantavirus (Hantaan virus 76-118)

  Host:  

Homo sapiens

  Confidence Score:  

0.6040

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-3182:           PARP9:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-3182 PARP9
miRBase
Accession/Entrez ID		 MIMAT0015062 83666
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - ARTD9//BAL//BAL1//MGC:7868

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-3182
rs1367036983 chr16:83508358    G/A
rs564683390 chr16:83508360    G/A
rs923654044 chr16:83508365    C/T

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR PARP9
chr3:122263548(-) A-I      intronic
chr3:122263539(-) A-I      intronic
chr3:122275985(-) A-I      intronic
chr3:122275968(-) A-I      intronic
chr3:122268064(-) A-I      intronic
chr3:122268061(-) A-I      intronic
chr3:122276732(-) A-I      intronic
chr3:122276740(-) A-I      intronic
chr3:122268032(-) A-I      intronic
chr3:122263601(-) A-I      intronic
chr3:122263571(-) A-I      intronic
chr3:122263574(-) A-I      intronic
chr3:122276716(-) A-I      intronic
chr3:122268411(-) A-I      intronic
chr3:122279358(-) A-I      intronic
chr3:122279362(-) A-I      intronic
chr3:122279372(-) A-I      intronic
chr3:122279412(-) A-I      intronic
chr3:122279438(-) A-I      intronic
chr3:122279528(-) A-I      intronic
chr3:122280094(-) A-I      intronic
chr3:122280207(-) A-I      intronic
chr3:122261850(-) A-I      intronic
chr3:122261865(-) A-I      intronic
chr3:122261882(-) A-I      intronic
chr3:122261885(-) A-I      intronic
chr3:122261918(-) A-I      intronic
chr3:122262597(-) A-I      intronic
chr3:122262603(-) A-I      intronic
chr3:122263447(-) A-I      intronic
chr3:122263472(-) A-I      intronic
chr3:122263481(-) A-I      intronic
chr3:122263588(-) A-I      intronic
chr3:122263626(-) A-I      intronic
chr3:122263661(-) A-I      intronic
chr3:122266039(-) A-I      intronic
chr3:122266044(-) A-I      intronic
chr3:122266053(-) A-I      intronic
chr3:122266074(-) A-I      intronic
chr3:122266135(-) A-I      intronic
chr3:122266136(-) A-I      intronic
chr3:122266155(-) A-I      intronic
chr3:122266434(-) A-I      intronic
chr3:122266443(-) A-I      intronic
chr3:122266632(-) A-I      intronic
chr3:122267954(-) A-I      intronic
chr3:122267967(-) A-I      intronic
chr3:122268010(-) A-I      intronic
chr3:122268030(-) A-I      intronic
chr3:122268031(-) A-I      intronic
chr3:122268033(-) A-I      intronic
chr3:122268372(-) A-I      intronic
chr3:122268436(-) A-I      intronic
chr3:122269037(-) A-I      intronic
chr3:122269042(-) A-I      intronic
chr3:122269073(-) A-I      intronic
chr3:122269091(-) A-I      intronic
chr3:122266588(-) A-I      intronic
chr3:122261530(-) A-I      intronic
chr3:122266624(-) A-I      intronic
chr3:122280143(-) A-I      intronic
chr3:122263559(-) A-I      intronic
chr3:122268480(-) A-I      intronic
chr3:122268504(-) A-I      intronic
chr3:122280299(-) A-I      intronic
chr3:122268026(-) A-I      intronic
chr3:122266455(-) A-I      intronic
chr3:122266080(-) A-I      intronic
chr3:122263645(-) A-I      intronic
chr3:122280175(-) A-I      intronic
chr3:122266618(-) A-I      intronic
chr3:122261545(-) A-I      intronic
chr3:122266572(-) A-I      intronic
chr3:122268383(-) A-I      intronic
chr3:122268498(-) A-I      intronic
chr3:122261875(-) A-I      intronic
chr3:122268545(-) A-I      intronic
chr3:122268109(-) A-I      intronic
chr3:122267934(-) A-I      intronic
chr3:122280149(-) A-I      intronic
chr3:122266531(-) A-I      intronic
chr3:122266497(-) A-I      intronic
chr3:122263575(-) A-I      intronic
chr3:122268559(-) A-I      intronic
chr3:122266578(-) A-I      intronic
chr3:122268533(-) A-I      intronic
chr3:122268435(-) A-I      intronic
chr3:122266470(-) A-I      intronic
chr3:122261399(-) A-I      intronic
chr3:122269024(-) A-I      intronic
chr3:122261438(-) A-I      intronic
chr3:122261381(-) A-I      intronic
chr3:122263496(-) A-I      intronic
chr3:122268516(-) A-I      intronic
chr3:122263600(-) A-I      intronic
chr3:122280212(-) A-I      intronic
chr3:122266605(-) A-I      intronic
chr3:122269094(-) A-I      intronic
chr3:122263498(-) A-I      intronic
chr3:122266106(-) A-I      intronic
chr3:122279414(-) A-I      intronic
chr3:122262223(-) A-I      intronic
chr3:122279417(-) A-I      intronic
chr3:122269023(-) A-I      intronic
chr3:122268071(-) A-I      intronic
chr3:122269102(-) A-I      intronic
chr3:122263407(-) A-I      intronic
chr3:122261961(-) A-I      intronic
chr3:122261423(-) A-I      intronic
chr3:122262151(-) A-I      intronic
chr3:122266479(-) A-I      intronic
chr3:122268045(-) A-I      intronic
chr3:122280123(-) A-I      intronic
chr3:122262301(-) A-I      intronic
chr3:122269033(-) A-I      intronic
chr3:122266478(-) A-I      intronic
chr3:122263583(-) A-I      intronic
chr3:122261464(-) A-I      intronic
chr3:122266698(-) A-I      intronic
chr3:122266543(-) A-I      intronic
chr3:122266079(-) A-I      intronic
chr3:122279500(-) A-I      intronic
chr3:122266614(-) A-I      intronic
chr3:122259810(-) A-I      intronic
chr3:122262396(-) A-I      intronic
chr3:122280140(-) A-I      intronic
chr3:122268036(-) A-I      intronic
chr3:122279506(-) A-I      intronic
chr3:122261403(-) A-I      intronic
chr3:122263631(-) A-I      intronic
chr3:122266111(-) A-I      intronic
chr3:122266613(-) A-I      intronic
chr3:122266551(-) A-I      intronic
chr3:122280199(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED PARP9
chr3:122268109(-) A-I intron -    15258596
chr3:122268144(-) A-I intron -    15258596
chr3:122268410(-) A-I intron -    15258596
chr3:122275998(-) A-I intron -    22327324
chr3:122275999(-) A-I intron -    22327324
chr3:122276695(-) A-I intron -    22327324
chr3:122276736(-) A-I intron -    22327324
chr3:122276695(-) A-G intron -    22484847
chr3:122276720(-) A-G intron -    22484847
chr3:122276736(-) A-G intron -    22484847
chr3:122276737(-) A-G intron -    22484847
chr3:122261428(-) T-C intron -    22484847
chr3:122261860(-) A-G intron -    22484847
chr3:122261878(-) A-G intron -    22484847
chr3:122263575(-) A-G intron -    22484847
chr3:122263600(-) A-G intron -    22484847
chr3:122263645(-) A-G intron -    22484847
chr3:122266479(-) A-G intron -    22484847
chr3:122266482(-) A-G intron -    22484847
chr3:122266497(-) A-G intron -    22484847
chr3:122266543(-) A-G intron -    22484847
chr3:122266614(-) A-G intron -    22484847
chr3:122266624(-) A-G intron -    22484847
chr3:122268036(-) A-G intron -    22484847
chr3:122268045(-) A-G intron -    22484847
chr3:122268384(-) A-G intron -    22484847
chr3:122268410(-) A-G intron -    22484847
chr3:122268435(-) A-G intron -    22484847
chr3:122269023(-) A-G intron -    22484847
chr3:122269030(-) A-G intron -    22484847
chr3:122269053(-) T-C intron -    22484847
chr3:122269094(-) A-G intron -    22484847
chr3:122269102(-) A-G intron -    22484847
chr3:122279506(-) A-G intron -    22484847
chr3:122280123(-) A-G intron -    22484847
chr3:122280149(-) A-G intron -    22484847
chr3:122280198(-) A-G intron -    22484847
chr3:122280212(-) A-G intron -    22484847
chr3:122275997(-) A-G intron -    22484847
chr3:122275998(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase PARP9
chr3:122246987-122246988(-) m6A 3'UTR//exon       24981863//28052920//27773535
chr3:122246998-122246999(-) m6A 3'UTR//exon       24981863//28052920//27773535
chr3:122247075-122247076(-) m6A 3'UTR//exon       24284625//24209618//24981863//28052920//27773535//22575960
chr3:122247096-122247097(-) m6A 3'UTR//exon       24284625//24209618//24981863//28052920//27773535//22575960
chr3:122247165-122247166(-) m6A 3'UTR//exon       24284625//24209618//24981863//28052920//27773535//22575960//22608085
chr3:122247264-122247265(-) m6A CDS//exon       24284625//24209618//24981863//28052920//27773535//22575960//22608085
chr3:122247273-122247274(-) m6A CDS//exon       24284625//24209618//24981863//28052920//27773535//22575960//22608085
chr3:122247317-122247318(-) m6A CDS//exon       24284625//24209618//24981863//28052920//27773535//22575960//22608085
chr3:122247365-122247366(-) m6A CDS//exon       24284625//24209618//24981863//28052920//27773535//22575960//22608085
chr3:122247453-122247454(-) m6A CDS//exon       24284625//24209618//24981863//28052920//27773535
chr3:122247544-122247545(-) m6A CDS//exon       24981863//28052920//27773535
chr3:122247553-122247554(-) m6A CDS//exon       24981863//28052920//27773535
chr3:122250625-122250626(-) m6A 3'UTR//intron       27773535
chr3:122250648-122250649(-) m6A 3'UTR//intron       27773535
chr3:122251699-122251700(-) m6A 3'UTR//intron       27773535
chr3:122251731-122251732(-) m6A 3'UTR//intron       27773535
chr3:122251804-122251805(-) m6A 3'UTR//intron       27773535
chr3:122251909-122251910(-) m6A 3'UTR//intron       24981863//27773535
chr3:122251939-122251940(-) m6A 3'UTR//intron       24981863//27773535
chr3:122251945-122251946(-) m6A 3'UTR//intron       24981863//27773535
chr3:122252082-122252083(-) m6A 3'UTR//intron       27773535
chr3:122253778-122253779(-) m6A 3'UTR//intron       27773535
chr3:122253824-122253825(-) m6A 3'UTR//intron       27773535
chr3:122253833-122253834(-) m6A 3'UTR//intron       27773535
chr3:122253881-122253882(-) m6A 3'UTR//intron       27773535
chr3:122254649-122254650(-) m6A 3'UTR//intron       24981863
chr3:122255175-122255176(-) m6A CDS//exon       27773535
chr3:122255813-122255814(-) m6A CDS//exon       27773535
chr3:122255893-122255894(-) m6A CDS//exon       24284625//24209618//24981863//28052920//27773535//22575960//22608085
chr3:122255911-122255912(-) m6A CDS//exon       24284625//24209618//24981863//28052920//27773535//22575960//22608085
chr3:122259392-122259393(-) m6A CDS//exon       24284625//24209618//24981863//28052920//27773535//22575960//22608085
chr3:122259444-122259445(-) m6A CDS//exon       24284625//24209618//24981863//28052920//27773535//22575960//22608085
chr3:122259486-122259487(-) m6A CDS//exon       24284625//24209618//24981863//28052920//27773535//22575960//22608085
chr3:122259514-122259515(-) m6A CDS//exon       24284625//24209618//24981863//28052920//27773535//22575960//22608085
chr3:122259563-122259564(-) m6A CDS//exon       24284625//24981863//27773535
chr3:122264289-122264290(-) m6A CDS//exon       27773535
chr3:122264397-122264398(-) m6A exon//intron       27773535
chr3:122269540-122269541(-) m6A CDS//intron       27773535
chr3:122269560-122269561(-) m6A CDS//intron       27773535
chr3:122269567-122269568(-) m6A CDS//intron       27773535
chr3:122274178-122274179(-) m6A CDS//intron       24209618//24981863//27773535
chr3:122274209-122274210(-) m6A CDS//intron       24284625//24209618//24981863//27773535
chr3:122274216-122274217(-) m6A CDS//intron       24284625//24209618//24981863//27773535
chr3:122274277-122274278(-) m6A CDS//intron       24284625//24209618//24981863//28052920//27773535//27371828//22608085
chr3:122274350-122274351(-) m6A CDS//intron       24284625//24209618//24981863//28052920//27773535//27371828//22575960//22608085
chr3:122274362-122274363(-) m6A CDS//intron       24284625//24209618//24981863//28052920//27773535//27371828//22575960//22608085
chr3:122274425-122274426(-) m6A CDS//intron       24284625//24209618//24981863//28052920//27773535//27371828//22575960//22608085
chr3:122274504-122274505(-) m6A CDS//intron       24284625//24209618//24981863//28052920//27773535//22575960//22608085
chr3:122274549-122274550(-) m6A CDS//intron       24284625//24209618//24981863//28052920//27773535//22575960
chr3:122274624-122274625(-) m6A CDS//intron       24284625//24209618//27773535
chr3:122274965-122274966(-) m6A CDS//intron       24981863
chr3:122278462-122278463(-) m6A CDS       24981863//27773535
chr3:122278475-122278476(-) m6A 5'UTR       24981863//27773535
chr3:122278487-122278488(-) m6A 5'UTR       24981863//27773535
chr3:122278497-122278498(-) m6A 5'UTR       24981863//27773535
chr3:122278533-122278534(-) m6A 5'UTR       24981863//27773535
chr3:122282970-122282971(-) m6A 5'UTR//intron       24981863//27773535
chr3:122283324-122283325(-) m6A 5'UTR       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-3182
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Cell lines(GBM46|GBM8|HaCaT|K562|MCF-10A|MCF-7|MGG75)|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocytes     -
PARP9
Exosome Blood     -
Nucleus Colon cancer cells     24393600
Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-3182
Interactor2: PARP9

Evidence Support:


Weak-Evidence RNA-Seq
Prediction-Evidence miRDB//miRTarBase//miRWalk//Targetscan
Support Database ViRBase

References:


PMID 32232013 Target region None
Source ViRBase Interactor1 expression None
Tissue or cell line HUVEC cells Interactor2 expression Upregulation
Description Then we predicted 320 target genes of these 16 DE miRNAs and constructed a miRNA-mRNA interaction network (Figure 5B, Table S5).

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