Detail Information

Basic Information:


  VIRBase ID:  

HHID00025039

  Virus:  

Hantaan orthohantavirus (Hantaan virus 76-118)

  Host:  

Homo sapiens

  Confidence Score:  

0.6040

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-330-5p:           NLRC5:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-330-5p NLRC5
miRBase
Accession/Entrez ID
MIMAT0004693 84166
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - CLR16.1//NOD27//NOD4

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-330-5p
rs1349824380 chr19:45639070    A/G
rs1359949384 chr19:45639062    G/A
rs760888385 chr19:45639051    C/G
rs761051145 chr19:45639055    GAC/G
rs1450351295 chr19:45639066    A/T
rs562108564 chr19:45639069    G/T
rs768769902 chr19:45639068    A/G

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR NLRC5
chr16:57039717(+) A-I      intronic
chr16:57097211(+) A-I      intronic
chr16:57028975(+) A-I      intronic
chr16:57049734(+) A-I      intronic
chr16:57028997(+) A-I      intronic
chr16:57049750(+) A-I      intronic
chr16:57049759(+) A-I      intronic
chr16:57028998(+) A-I      intronic
chr16:57039644(+) A-I      intronic
chr16:57039647(+) A-I      intronic
chr16:57039653(+) A-I      intronic
chr16:57039655(+) A-I      intronic
chr16:57090272(+) A-I      intronic
chr16:57039672(+) A-I      intronic
chr16:57044468(+) A-I      intronic
chr16:57036115(+) A-I      intronic
chr16:57036121(+) A-I      intronic
chr16:57036140(+) A-I      intronic
chr16:57036163(+) A-I      intronic
chr16:57036164(+) A-I      intronic
chr16:57036177(+) A-I      intronic
chr16:57037102(+) A-I      intronic
chr16:57098660(+) A-I      intronic
chr16:57037152(+) A-I      intronic
chr16:57037214(+) A-I      intronic
chr16:57038250(+) A-I      intronic
chr16:57038275(+) A-I      intronic
chr16:57038276(+) A-I      intronic
chr16:57039787(+) A-I      intronic
chr16:57040010(+) A-I      intronic
chr16:57044452(+) A-I      intronic
chr16:57042950(+) A-I      intronic
chr16:57044547(+) A-I      intronic
chr16:57044559(+) A-I      intronic
chr16:57045070(+) A-I      intronic
chr16:57045218(+) A-I      intronic
chr16:57045540(+) A-I      intronic
chr16:57048940(+) A-I      intronic
chr16:57049050(+) A-I      intronic
chr16:57049075(+) A-I      intronic
chr16:57098665(+) A-I      intronic
chr16:57098675(+) A-I      intronic
chr16:57098689(+) A-I      intronic
chr16:57098693(+) A-I      intronic
chr16:57098725(+) A-I      intronic
chr16:57098761(+) A-I      intronic
chr16:57100071(+) A-I      intronic
chr16:57049084(+) A-I      intronic
chr16:57108973(+) A-I      intronic
chr16:57049626(+) A-I      intronic
chr16:57098559(+) A-I      intronic
chr16:57098077(+) A-I      intronic
chr16:57098015(+) A-I      intronic
chr16:57097912(+) A-I      intronic
chr16:57097852(+) A-I      intronic
chr16:57097790(+) A-I      intronic
chr16:57097731(+) A-I      intronic
chr16:57097203(+) A-I      intronic
chr16:57031022(+) A-I      intronic
chr16:57030801(+) A-I      intronic
chr16:57030372(+) A-I      intronic
chr16:57030359(+) A-I      intronic
chr16:57030336(+) A-I      intronic
chr16:57030215(+) A-I      intronic
chr16:57030194(+) A-I      intronic
chr16:57030112(+) A-I      intronic
chr16:57028943(+) A-I      intronic
chr16:57028939(+) A-I      intronic
chr16:57083452(+) A-I      intronic
chr16:57028928(+) A-I      intronic
chr16:57028901(+) A-I      intronic
chr16:57028823(+) A-I      intronic
chr16:57090670(+) A-I      intronic
chr16:57090645(+) A-I      intronic
chr16:57090302(+) A-I      intronic
chr16:57087715(+) A-I      intronic
chr16:57087706(+) A-I      intronic
chr16:57087675(+) A-I      intronic
chr16:57087670(+) A-I      intronic
chr16:57087607(+) A-I      intronic
chr16:57085051(+) A-I      intronic
chr16:57084906(+) A-I      intronic
chr16:57098616(+) A-I      intronic
chr16:57084894(+) A-I      intronic
chr16:57083462(+) A-I      intronic
chr16:57098748(+) A-I      intronic
chr16:57083447(+) A-I      intronic
chr16:57072695(+) A-I      intronic
chr16:57072688(+) A-I      intronic
chr16:57055295(+) A-I      intronic
chr16:57050092(+) A-I      intronic
chr16:57050006(+) A-I      intronic
chr16:57049925(+) A-I      intronic
chr16:57049692(+) A-I      intronic
chr16:57040011(+) A-I      intronic
chr16:57098607(+) A-I      intronic
chr16:57098586(+) A-I      intronic
chr16:57098572(+) A-I      intronic
chr16:57040140(+) A-I      intronic
chr16:57040354(+) A-I      intronic
chr16:57041492(+) A-I      intronic
chr16:57042949(+) A-I      intronic
chr16:57044337(+) A-I      intronic
chr16:57044386(+) A-I      intronic
chr16:57044447(+) A-I      intronic
chr16:57090754(+) A-I      intronic
chr16:57090805(+) A-I      intronic
chr16:57091099(+) A-I      intronic
chr16:57091225(+) A-I      intronic
chr16:57091232(+) A-I      intronic
chr16:57091318(+) A-I      intronic
chr16:57049687(+) A-I      intronic
chr16:57097154(+) A-I      intronic
chr16:57097161(+) A-I      intronic
chr16:57098634(+) A-I      intronic
chr16:57098635(+) A-I      intronic
chr16:57098646(+) A-I      intronic
chr16:57098650(+) A-I      intronic
chr16:57091113(+) A-I      intronic
chr16:57028955(+) A-I      intronic
chr16:57044495(+) A-I      intronic
chr16:57037100(+) A-I      intronic
chr16:57090315(+) A-I      intronic
chr16:57040004(+) A-I      intronic
chr16:57029007(+) A-I      intronic
chr16:57091077(+) A-I      intronic
chr16:57078578(+) A-I      intronic
chr16:57055384(+) A-I      intronic
chr16:57084971(+) A-I      intronic
chr16:57028966(+) A-I      intronic
chr16:57037183(+) A-I      intronic
chr16:57091168(+) A-I      intronic
chr16:57091268(+) A-I      intronic
chr16:57039645(+) A-I      intronic
chr16:57028910(+) A-I      intronic
chr16:57039337(+) A-I      intronic
chr16:57036740(+) A-I      intronic
chr16:57090399(+) A-I      intronic
chr16:57098100(+) A-I      intronic
chr16:57084954(+) A-I      intronic
chr16:57038217(+) A-I      intronic
chr16:57049021(+) A-I      intronic
chr16:57091177(+) A-I      intronic
chr16:57091248(+) A-I      intronic
chr16:57041547(+) A-I      intronic
chr16:57040085(+) A-I      intronic
chr16:57091155(+) A-I      intronic
chr16:57090845(+) A-I      intronic
chr16:57040095(+) A-I      intronic
chr16:57084980(+) A-I      intronic
chr16:57048980(+) A-I      intronic
chr16:57049719(+) A-I      intronic
chr16:57040146(+) A-I      intronic
chr16:57091134(+) A-I      intronic
chr16:57097262(+) A-I      intronic
chr16:57044390(+) A-I      intronic
chr16:57097164(+) A-I      intronic
chr16:57048941(+) A-I      intronic
chr16:57090833(+) A-I      intronic
chr16:57049061(+) A-I      intronic
chr16:57090664(+) A-I      intronic
chr16:57083392(+) A-I      intronic
chr16:57039675(+) A-I      intronic
chr16:57098064(+) A-I      intronic
chr16:57039682(+) A-I      intronic
chr16:57072685(+) A-I      intronic
chr16:57030216(+) A-I      intronic
chr16:57090710(+) A-I      intronic
chr16:57045420(+) A-I      intronic
chr16:57039342(+) A-I      intronic
chr16:57090289(+) A-I      intronic
chr16:57077977(+) A-I      intronic
chr16:57091078(+) A-I      intronic
chr16:57030332(+) A-I      intronic
chr16:57044451(+) A-I      intronic
chr16:57091256(+) A-I      intronic
chr16:57097250(+) A-I      intronic
chr16:57086238(+) A-I      intronic
chr16:57090422(+) A-I      intronic
chr16:57097264(+) A-I      intronic
chr16:57030207(+) A-I      intronic
chr16:57090650(+) A-I      intronic
chr16:57049013(+) A-I      intronic
chr16:57090303(+) A-I      intronic
chr16:57098564(+) A-I      intronic
chr16:57049823(+) A-I      intronic
chr16:57098756(+) A-I      intronic
chr16:57041576(+) A-I      intronic
chr16:57090751(+) A-I      intronic
chr16:57097094(+) A-I      intronic
chr16:57028886(+) A-I      intronic
chr16:57097289(+) A-I      intronic
chr16:57083466(+) A-I      intronic
chr16:57098580(+) A-I      intronic
chr16:57040040(+) A-I      intronic
chr16:57083483(+) A-I      intronic
chr16:57090342(+) A-I      intronic
chr16:57097537(+) A-I      intronic
chr16:57091146(+) A-I      intronic
chr16:57039757(+) A-I      intronic
chr16:57098007(+) A-I      intronic
chr16:57039685(+) A-I      intronic
chr16:57091285(+) A-I      intronic
chr16:57090469(+) A-I      intronic
chr16:57045202(+) A-I      intronic
chr16:57041522(+) A-I      intronic
chr16:57090424(+) A-I      intronic
chr16:57049026(+) A-I      intronic
chr16:57091137(+) A-I      intronic
chr16:57097924(+) A-I      intronic
chr16:57040173(+) A-I      intronic
chr16:57097237(+) A-I      intronic
chr16:57086264(+) A-I      intronic
chr16:57045205(+) A-I      intronic
chr16:57030881(+) A-I      intronic
chr16:57097267(+) A-I      intronic
chr16:57091069(+) A-I      intronic
chr16:57039629(+) A-I      intronic
chr16:57098819(+) A-I      intronic
chr16:57026578(+) A-I      intronic
chr16:57030189(+) A-I      intronic
chr16:57107780(+) A-I      intronic
chr16:57083486(+) A-I      intronic
chr16:57091281(+) A-I      intronic
chr16:57091156(+) A-I      intronic
chr16:57090590(+) A-I      intronic
chr16:57098102(+) A-I      intronic
chr16:57049974(+) A-I      intronic
chr16:57091324(+) A-I      intronic
chr16:57090671(+) A-I      intronic
chr16:57091101(+) A-I      intronic
chr16:57090219(+) A-I      intronic
chr16:57050080(+) A-I      intronic
chr16:57041483(+) A-I      intronic
chr16:57039941(+) A-I      intronic
chr16:57090635(+) A-I      intronic
chr16:57091215(+) A-I      intronic
chr16:57045582(+) A-I      intronic
chr16:57045069(+) A-I      intronic
chr16:57037182(+) A-I      intronic
chr16:57040131(+) A-I      intronic
chr16:57044520(+) A-I      intronic
chr16:57049745(+) A-I      intronic
chr16:57045487(+) A-I      intronic
chr16:57030832(+) A-I      intronic
chr16:57090423(+) A-I      intronic
chr16:57098023(+) A-I      intronic
chr16:57097536(+) A-I      intronic
chr16:57030307(+) A-I      intronic
chr16:57091323(+) A-I      intronic
chr16:57039752(+) A-I      intronic
chr16:57098757(+) A-I      intronic
chr16:57084858(+) A-I      intronic
chr16:57039711(+) A-I      intronic
chr16:57072696(+) A-I      intronic
chr16:57097835(+) A-I      intronic
chr16:57097570(+) A-I      intronic
chr16:57098581(+) A-I      intronic
chr16:57098029(+) A-I      intronic
chr16:57039751(+) A-I      intronic
chr16:57091189(+) A-I      intronic
chr16:57039819(+) A-I      intronic
chr16:57044425(+) A-I      intronic
chr16:57044427(+) A-I      intronic
chr16:57090622(+) A-I      intronic
chr16:57091147(+) A-I      intronic
chr16:57039974(+) A-I      intronic
chr16:57049024(+) A-I      intronic
chr16:57041495(+) A-I      intronic
chr16:57090854(+) A-I      intronic
chr16:57097124(+) A-I      intronic
chr16:57097111(+) A-I      intronic
chr16:57072334(+) A-I      intronic
chr16:57084904(+) A-I      intronic
chr16:57091242(+) A-I      intronic
chr16:57091316(+) A-I      intronic
chr16:57114594(+) A-I      intronic
chr16:57098024(+) A-I      intronic
chr16:57097849(+) A-I      intronic
chr16:57090674(+) A-I      intronic
chr16:57097182(+) A-I      intronic
chr16:57044356(+) A-I      intronic
chr16:57097142(+) A-I      intronic
chr16:57097186(+) A-I      intronic
chr16:57097290(+) A-I      intronic
chr16:57030105(+) A-I      intronic
chr16:57044485(+) A-I      intronic
chr16:57087676(+) A-I      intronic
chr16:57098030(+) A-I      intronic
chr16:57049765(+) A-I      intronic
chr16:57097125(+) A-I      intronic
chr16:57097055(+) A-I      intronic
chr16:57031058(+) A-I      intronic
chr16:57044415(+) A-I      intronic
chr16:57090332(+) A-I      intronic
chr16:57030333(+) A-I      intronic
chr16:57090712(+) A-I      intronic
chr16:57045166(+) A-I      intronic
chr16:57098745(+) A-I      intronic
chr16:57028965(+) A-I      intronic
chr16:57098716(+) A-I      intronic
chr16:57090626(+) A-I      intronic
chr16:57097225(+) A-I      intronic
chr16:57091238(+) A-I      intronic
chr16:57072637(+) A-I      intronic
chr16:57049718(+) A-I      intronic
chr16:57087480(+) A-I      intronic
chr16:57083528(+) A-I      intronic
chr16:57090700(+) A-I      intronic
chr16:57084784(+) A-I      intronic
chr16:57097217(+) A-I      intronic
chr16:57030183(+) A-I      intronic
chr16:57091257(+) A-I      intronic
chr16:57030229(+) A-I      intronic
chr16:57040029(+) A-I      intronic
chr16:57090768(+) A-I      intronic
chr16:57090705(+) A-I      intronic
chr16:57028903(+) A-I      intronic
chr16:57039973(+) A-I      intronic
chr16:57039598(+) A-I      intronic
chr16:57097228(+) A-I      intronic
chr16:57090320(+) A-I      intronic
chr16:57097099(+) A-I      intronic
chr16:57068397(+) A-I      intronic
chr16:57091221(+) A-I      intronic
chr16:57026623(+) A-I      intronic
chr16:57039814(+) A-I      intronic
chr16:57091123(+) A-I      intronic
chr16:57090719(+) A-I      intronic
chr16:57068396(+) A-I      intronic
chr16:57091286(+) A-I      intronic
chr16:57030219(+) A-I      intronic
chr16:57090411(+) A-I      intronic
chr16:57045174(+) A-I      intronic
chr16:57091216(+) A-I      intronic
chr16:57049913(+) A-I      intronic
chr16:57091051(+) A-I      intronic
chr16:57030190(+) A-I      intronic
chr16:57090697(+) A-I      intronic
chr16:57090282(+) A-I      intronic
chr16:57091157(+) A-I      intronic
chr16:57026569(+) A-I      intronic
chr16:57040028(+) A-I      intronic
chr16:57090234(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED NLRC5
chr16:57090234(+) A-I intron -    21960545   //22327324
chr16:57090342(+) A-I intron -    21960545   //22327324
chr16:57090423(+) A-I intron -    21960545   //22327324
chr16:57090710(+) A-I intron -    22327324
chr16:57091113(+) A-I intron -    22327324
chr16:57091147(+) A-I intron -    22327324
chr16:57091323(+) A-I intron -    22327324
chr16:57091324(+) A-I intron -    22327324
chr16:57097125(+) A-I intron -    22327324
chr16:57071114(+) A-I exon CDS    21960545
chr16:57090282(+) A-I intron -    21960545
chr16:57090422(+) A-I intron -    21960545
chr16:57090424(+) A-I intron -    21960545
chr16:57068396(+) A-G intron -    22484847
chr16:57090234(+) A-G intron -    22484847
chr16:57090282(+) A-G intron -    22484847
chr16:57090303(+) A-G intron -    22484847
chr16:57090315(+) A-G intron -    22484847
chr16:57090320(+) A-G intron -    22484847
chr16:57090332(+) A-G intron -    22484847
chr16:57090342(+) A-G intron -    22484847
chr16:57090399(+) A-G intron -    22484847
chr16:57090422(+) A-G intron -    22484847
chr16:57090423(+) A-G intron -    22484847
chr16:57090424(+) A-G intron -    22484847
chr16:57090590(+) A-G intron -    22484847
chr16:57090622(+) A-G intron -    22484847
chr16:57090674(+) A-G intron -    22484847
chr16:57090697(+) A-G intron -    22484847
chr16:57090700(+) A-G intron -    22484847
chr16:57090710(+) A-G intron -    22484847
chr16:57090768(+) A-G intron -    22484847
chr16:57090845(+) A-G intron -    22484847
chr16:57090854(+) A-G intron -    22484847
chr16:57091113(+) A-G intron -    22484847
chr16:57091123(+) A-G intron -    22484847
chr16:57091146(+) A-G intron -    22484847
chr16:57091147(+) A-G intron -    22484847
chr16:57091156(+) A-G intron -    22484847
chr16:57091177(+) A-G intron -    22484847
chr16:57091189(+) A-G intron -    22484847
chr16:57091215(+) A-G intron -    22484847
chr16:57091216(+) A-G intron -    22484847
chr16:57091221(+) A-G intron -    22484847
chr16:57091242(+) A-G intron -    22484847
chr16:57091248(+) A-G intron -    22484847
chr16:57091257(+) A-G intron -    22484847
chr16:57091281(+) A-G intron -    22484847
chr16:57091285(+) A-G intron -    22484847
chr16:57091316(+) A-G intron -    22484847
chr16:57091323(+) A-G intron -    22484847
chr16:57091324(+) A-G intron -    22484847
chr16:57097124(+) A-G intron -    22484847
chr16:57097125(+) A-G intron -    22484847
chr16:57097164(+) A-G intron -    22484847
chr16:57097217(+) A-G intron -    22484847
chr16:57097250(+) A-G intron -    22484847
chr16:57097290(+) A-G intron -    22484847
chr16:57097924(+) A-G intron -    22484847
chr16:57098023(+) A-G intron -    22484847
chr16:57091051(+) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase NLRC5
chr16:57024551-57024552(+) m6A exon//intron       24284625//24981863
chr16:57024571-57024572(+) m6A exon//intron       24284625//24981863
chr16:57024594-57024595(+) m6A exon//intron       24284625
chr16:57024691-57024692(+) m6A exon//intron       -
chr16:57024757-57024758(+) m6A exon//intron       -
chr16:57024784-57024785(+) m6A exon//intron       -
chr16:57024793-57024794(+) m6A exon//intron       -
chr16:57024860-57024861(+) m6A exon//intron       24981863
chr16:57024884-57024885(+) m6A exon//intron       24981863
chr16:57024929-57024930(+) m6A exon//intron       24981863
chr16:57024951-57024952(+) m6A exon//intron       24981863
chr16:57024977-57024978(+) m6A exon//intron       24981863
chr16:57025894-57025895(+) m6A exon//intron       24284625//24981863//22575960
chr16:57025922-57025923(+) m6A exon//intron       24284625//24981863//22575960
chr16:57025932-57025933(+) m6A exon//intron       24284625//24981863//22575960
chr16:57025938-57025939(+) m6A exon//intron       24284625//24981863//22575960
chr16:57025953-57025954(+) m6A exon//intron       24284625//24981863//22575960
chr16:57026007-57026008(+) m6A exon//intron       24284625//24209618//24981863//22575960
chr16:57026036-57026037(+) m6A exon//intron       24284625//24209618//24981863
chr16:57026111-57026112(+) m6A exon//intron       24284625//24209618//24981863
chr16:57026126-57026127(+) m6A exon//intron       24284625//24209618//24981863
chr16:57026267-57026268(+) m6A exon//intron       24284625//24981863
chr16:57026274-57026275(+) m6A exon//intron       24284625//24981863
chr16:57026299-57026300(+) m6A exon//intron       24981863
chr16:57026310-57026311(+) m6A exon//intron       24981863
chr16:57038443-57038444(+) m6A 5'UTR//intron       24981863
chr16:57038459-57038460(+) m6A 5'UTR//intron       24981863
chr16:57051002-57051003(+) m6A 5'UTR//exon       24284625//24981863
chr16:57051040-57051041(+) m6A 5'UTR//exon       24284625//24981863
chr16:57051051-57051052(+) m6A 5'UTR//exon       24284625//24981863
chr16:57051066-57051067(+) m6A 5'UTR//exon       24284625
chr16:57051095-57051096(+) m6A 5'UTR//exon       24284625
chr16:57054628-57054629(+) m6A CDS//exon       24284625
chr16:57054658-57054659(+) m6A CDS//exon       24284625
chr16:57054694-57054695(+) m6A CDS//exon       24284625
chr16:57054742-57054743(+) m6A CDS//exon       24284625
chr16:57054762-57054763(+) m6A CDS//exon       24284625
chr16:57054769-57054770(+) m6A CDS//exon       24284625
chr16:57054776-57054777(+) m6A CDS//exon       24284625
chr16:57059311-57059312(+) m6A CDS       24284625
chr16:57059420-57059421(+) m6A CDS       24284625//24981863
chr16:57059486-57059487(+) m6A CDS       24284625//24209618//24981863
chr16:57059557-57059558(+) m6A CDS       24284625//24209618//24981863//22575960
chr16:57059606-57059607(+) m6A CDS       24284625//24209618//24981863//22575960
chr16:57059714-57059715(+) m6A CDS       24284625//24981863
chr16:57059857-57059858(+) m6A CDS       24284625
chr16:57060037-57060038(+) m6A CDS       24284625//24209618//25456834//24981863//22575960
chr16:57060230-57060231(+) m6A CDS       24284625//24209618//24981863//22575960
chr16:57060262-57060263(+) m6A CDS       24284625//24981863//22575960
chr16:57060376-57060377(+) m6A CDS       24284625//24209618//25456834//24981863//22575960
chr16:57060452-57060453(+) m6A CDS       24284625//24209618//24981863//22575960
chr16:57060458-57060459(+) m6A CDS       24284625//24209618//24981863//22575960
chr16:57060505-57060506(+) m6A CDS       24284625//24209618//25456834//24981863//22575960
chr16:57060516-57060517(+) m6A CDS       24284625//24209618//25456834//24981863//22575960
chr16:57060530-57060531(+) m6A CDS       24284625//24209618//25456834//24981863//22575960
chr16:57060611-57060612(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960
chr16:57060718-57060719(+) m6A CDS//exon       24284625//24981863
chr16:57065323-57065324(+) m6A 3'UTR//CDS       24284625
chr16:57065355-57065356(+) m6A 3'UTR//CDS       24284625
chr16:57067523-57067524(+) m6A 3'UTR//CDS       24284625
chr16:57079391-57079392(+) m6A 3'UTR//CDS//exon       24284625
chr16:57079396-57079397(+) m6A 3'UTR//CDS//exon       24284625
chr16:57080492-57080493(+) m6A 3'UTR//CDS//exon//intron       24284625
chr16:57081515-57081516(+) m6A 3'UTR//CDS//exon       24284625
chr16:57081525-57081526(+) m6A 3'UTR//CDS//exon       24284625
chr16:57081534-57081535(+) m6A 3'UTR//CDS//exon       24284625
chr16:57081862-57081863(+) m6A 3'UTR//intron       24284625
chr16:57081954-57081955(+) m6A 3'UTR//intron       24284625
chr16:57081976-57081977(+) m6A 3'UTR//intron       -
chr16:57081981-57081982(+) m6A 3'UTR//intron       -
chr16:57081994-57081995(+) m6A 3'UTR//intron       -
chr16:57096438-57096439(+) m6A exon//intron       24284625//22575960
chr16:57096514-57096515(+) m6A exon//intron       24284625//22575960
chr16:57096571-57096572(+) m6A exon//intron       24284625
chr16:57116393-57116394(+) m6A 3'UTR//CDS//exon       24284625
chr16:57116453-57116454(+) m6A 3'UTR//exon       24284625//24981863//22575960
chr16:57116602-57116603(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960
chr16:57116614-57116615(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960
chr16:57116632-57116633(+) m6A 3'UTR//exon       24284625//24981863//26404942//22575960
chr16:57116679-57116680(+) m6A 3'UTR//exon       24284625//24981863//26404942//22575960
chr16:57116876-57116877(+) m6A 3'UTR//exon       26404942
chr16:57117123-57117124(+) m6A 3'UTR//exon       24981863
chr16:57117164-57117165(+) m6A 3'UTR//exon       24981863
chr16:57117225-57117226(+) m6A 3'UTR//exon       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-330-5p
Exosome HCC tissues     30542726
Exosome Plasma     23663360
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Blood|Colon cancer cell line (LIM1863)|Fibroblasts|Mesenchymal stem cells     -
NLRC5
Cytosol HCC cell line (HepG2)     -
Exosome Blood     -
Nucleus HeLa-S3 cells     -
Ribosome Colon cancer cells     24393600

Related Drug Information:


Resource Symbol Drug Name PubChem
ID
Function Link  
RNAInter hsa-miR-330-5p
D-Glucose 5793 Drug interaction    RC00007082
Mistletoe lectin-I - Drug interaction    RC00007083
Resource Symbol Drug Name PubChem ID PMID
NoncoRNA hsa-miR-330-5p

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-330-5p
Interactor2: NLRC5

Evidence Support:


Weak-Evidence RNA-Seq
Prediction-Evidence miRDB//miRTarBase//miRWalk//Targetscan
Support Database ViRBase

References:


PMID 32232013 Target region None
Source ViRBase Interactor1 expression None
Tissue or cell line HUVEC cells Interactor2 expression Upregulation
Description Then we predicted 320 target genes of these 16 DE miRNAs and constructed a miRNA-mRNA interaction network (Figure 5B, Table S5).

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