Detail Information

Basic Information:


  VIRBase ID:  

HHID00025019

  Virus:  

Hantaan orthohantavirus (Hantaan virus 76-118)

  Host:  

Homo sapiens

  Confidence Score:  

0.6040

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-330-5p:           RNF213:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-330-5p RNF213
miRBase
Accession/Entrez ID
MIMAT0004693 57674
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - ALO17//C17orf27//KIAA1618//MYMY2//MYSTR//NET57

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-330-5p
rs1349824380 chr19:45639070    A/G
rs1359949384 chr19:45639062    G/A
rs760888385 chr19:45639051    C/G
rs761051145 chr19:45639055    GAC/G
rs1450351295 chr19:45639066    A/T
rs562108564 chr19:45639069    G/T
rs768769902 chr19:45639068    A/G

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR RNF213
chr17:78275737(+) A-I      intronic
chr17:78275742(+) A-I      intronic
chr17:78364741(+) A-I      intronic
chr17:78364731(+) A-I      intronic
chr17:78241748(+) A-I      intronic
chr17:78275734(+) A-I      intronic
chr17:78259635(+) A-I      intronic
chr17:78266072(+) A-I      intronic
chr17:78294757(+) A-I      3'UTR
chr17:78294725(+) A-I      3'UTR
chr17:78365115(+) A-I      intronic
chr17:78295543(+) A-I      intronic
chr17:78296229(+) A-I      intronic
chr17:78296022(+) A-I      intronic
chr17:78296017(+) A-I      intronic
chr17:78296000(+) A-I      intronic
chr17:78295665(+) A-I      intronic
chr17:78364708(+) A-I      intronic
chr17:78364709(+) A-I      intronic
chr17:78364715(+) A-I      intronic
chr17:78365307(+) A-I      intronic
chr17:78365293(+) A-I      intronic
chr17:78365281(+) A-I      intronic
chr17:78365232(+) A-I      intronic
chr17:78365151(+) A-I      intronic
chr17:78240855(+) A-I      intronic
chr17:78364819(+) A-I      intronic
chr17:78364798(+) A-I      intronic
chr17:78364755(+) A-I      intronic
chr17:78296288(+) A-I      intronic
chr17:78364751(+) A-I      intronic
chr17:78285765(+) A-I      intronic
chr17:78296317(+) A-I      intronic
chr17:78239635(+) A-I      intronic
chr17:78239646(+) A-I      intronic
chr17:78240031(+) A-I      intronic
chr17:78240050(+) A-I      intronic
chr17:78240226(+) A-I      intronic
chr17:78240851(+) A-I      intronic
chr17:78240854(+) A-I      intronic
chr17:78295625(+) A-I      intronic
chr17:78240856(+) A-I      intronic
chr17:78240869(+) A-I      intronic
chr17:78240896(+) A-I      intronic
chr17:78241125(+) A-I      intronic
chr17:78241162(+) A-I      intronic
chr17:78241187(+) A-I      intronic
chr17:78241693(+) A-I      intronic
chr17:78241723(+) A-I      intronic
chr17:78250146(+) A-I      intronic
chr17:78250643(+) A-I      intronic
chr17:78251250(+) A-I      intronic
chr17:78251317(+) A-I      intronic
chr17:78251318(+) A-I      intronic
chr17:78251322(+) A-I      intronic
chr17:78254327(+) A-I      intronic
chr17:78254515(+) A-I      intronic
chr17:78255773(+) A-I      intronic
chr17:78255795(+) A-I      intronic
chr17:78256291(+) A-I      intronic
chr17:78256327(+) A-I      intronic
chr17:78256337(+) A-I      intronic
chr17:78256515(+) A-I      intronic
chr17:78256614(+) A-I      intronic
chr17:78304783(+) A-I      intronic
chr17:78304828(+) A-I      intronic
chr17:78304668(+) A-I      intronic
chr17:78306988(+) A-I      intronic
chr17:78307067(+) A-I      intronic
chr17:78307338(+) A-I      intronic
chr17:78307439(+) A-I      intronic
chr17:78307446(+) A-I      intronic
chr17:78256636(+) A-I      intronic
chr17:78259506(+) A-I      intronic
chr17:78307459(+) A-I      intronic
chr17:78314658(+) A-I      intronic
chr17:78314669(+) A-I      intronic
chr17:78364326(+) A-I      intronic
chr17:78364338(+) A-I      intronic
chr17:78364394(+) A-I      intronic
chr17:78259570(+) A-I      intronic
chr17:78259573(+) A-I      intronic
chr17:78259574(+) A-I      intronic
chr17:78259631(+) A-I      intronic
chr17:78265977(+) A-I      intronic
chr17:78266045(+) A-I      intronic
chr17:78266973(+) A-I      intronic
chr17:78267032(+) A-I      intronic
chr17:78267136(+) A-I      intronic
chr17:78267547(+) A-I      intronic
chr17:78296283(+) A-I      intronic
chr17:78364465(+) A-I      intronic
chr17:78364613(+) A-I      intronic
chr17:78364648(+) A-I      intronic
chr17:78364684(+) A-I      intronic
chr17:78364700(+) A-I      intronic
chr17:78267567(+) A-I      intronic
chr17:78267576(+) A-I      intronic
chr17:78270575(+) A-I      intronic
chr17:78270997(+) A-I      intronic
chr17:78271121(+) A-I      intronic
chr17:78271292(+) A-I      intronic
chr17:78285741(+) A-I      intronic
chr17:78285740(+) A-I      intronic
chr17:78285672(+) A-I      intronic
chr17:78285655(+) A-I      intronic
chr17:78283827(+) A-I      intronic
chr17:78283739(+) A-I      intronic
chr17:78283730(+) A-I      intronic
chr17:78280531(+) A-I      intronic
chr17:78279850(+) A-I      intronic
chr17:78279830(+) A-I      intronic
chr17:78271466(+) A-I      intronic
chr17:78364706(+) A-I      intronic
chr17:78364662(+) A-I      intronic
chr17:78315525(+) A-I      intronic
chr17:78254382(+) A-I      intronic
chr17:78315391(+) A-I      intronic
chr17:78240089(+) A-I      intronic
chr17:78315526(+) A-I      intronic
chr17:78267122(+) A-I      intronic
chr17:78349355(+) A-I      intronic
chr17:78258196(+) A-I      intronic
chr17:78270611(+) A-I      intronic
chr17:78238963(+) A-I      intronic
chr17:78364704(+) A-I      intronic
chr17:78240473(+) A-I      intronic
chr17:78240523(+) A-I      intronic
chr17:78315736(+) A-I      intronic
chr17:78256680(+) A-I      intronic
chr17:78241688(+) A-I      intronic
chr17:78364711(+) A-I      intronic
chr17:78303520(+) A-I      intronic
chr17:78297389(+) A-I      intronic
chr17:78285695(+) A-I      intronic
chr17:78241119(+) A-I      intronic
chr17:78364783(+) A-I      intronic
chr17:78295709(+) A-I      intronic
chr17:78295629(+) A-I      intronic
chr17:78239687(+) A-I      intronic
chr17:78240016(+) A-I      intronic
chr17:78315808(+) A-I      intronic
chr17:78307373(+) A-I      intronic
chr17:78342989(+) A-I      intronic
chr17:78285772(+) A-I      intronic
chr17:78266896(+) A-I      intronic
chr17:78279035(+) A-I      intronic
chr17:78364697(+) A-I      intronic
chr17:78296255(+) A-I      intronic
chr17:78266936(+) A-I      intronic
chr17:78304692(+) A-I      intronic
chr17:78296038(+) A-I      intronic
chr17:78249948(+) A-I      intronic
chr17:78258146(+) A-I      intronic
chr17:78352912(+) A-I      intronic
chr17:78276398(+) A-I      intronic
chr17:78296189(+) A-I      intronic
chr17:78267505(+) A-I      intronic
chr17:78303510(+) A-I      intronic
chr17:78303447(+) A-I      intronic
chr17:78241824(+) A-I      intronic
chr17:78238894(+) A-I      intronic
chr17:78364220(+) A-I      intronic
chr17:78266023(+) A-I      intronic
chr17:78365134(+) A-I      intronic
chr17:78278263(+) A-I      intronic
chr17:78364433(+) A-I      intronic
chr17:78266058(+) A-I      intronic
chr17:78247558(+) A-I      intronic
chr17:78240484(+) A-I      intronic
chr17:78304744(+) A-I      intronic
chr17:78254394(+) A-I      intronic
chr17:78294689(+) A-I      3'UTR
chr17:78294379(+) A-I      3'UTR
chr17:78294525(+) A-I      3'UTR
chr17:78294775(+) A-I      3'UTR
chr17:78294253(+) A-I      3'UTR
chr17:78283682(+) A-I      intronic
chr17:78266931(+) A-I      intronic
chr17:78240381(+) A-I      intronic
chr17:78296100(+) A-I      intronic
chr17:78255839(+) A-I      intronic
chr17:78274447(+) A-I      intronic
chr17:78303419(+) A-I      intronic
chr17:78271156(+) A-I      intronic
chr17:78270656(+) A-I      intronic
chr17:78364362(+) A-I      intronic
chr17:78269946(+) A-I      intronic
chr17:78315399(+) A-I      intronic
chr17:78315638(+) A-I      intronic
chr17:78272734(+) A-I      intronic
chr17:78259743(+) A-I      intronic
chr17:78342372(+) A-I      intronic
chr17:78241808(+) A-I      intronic
chr17:78283575(+) A-I      intronic
chr17:78240510(+) A-I      intronic
chr17:78295700(+) A-I      intronic
chr17:78365210(+) A-I      intronic
chr17:78277443(+) A-I      intronic
chr17:78364719(+) A-I      intronic
chr17:78241712(+) A-I      intronic
chr17:78304698(+) A-I      intronic
chr17:78259654(+) A-I      intronic
chr17:78285877(+) A-I      intronic
chr17:78274393(+) A-I      intronic
chr17:78295626(+) A-I      intronic
chr17:78241087(+) A-I      intronic
chr17:78279603(+) A-I      intronic
chr17:78271653(+) A-I      intronic
chr17:78274614(+) A-I      intronic
chr17:78352745(+) A-I      intronic
chr17:78303367(+) A-I      intronic
chr17:78283574(+) A-I      intronic
chr17:78254392(+) A-I      intronic
chr17:78301065(+) A-I      intronic
chr17:78277622(+) A-I      intronic
chr17:78283695(+) A-I      intronic
chr17:78279032(+) A-I      intronic
chr17:78241855(+) A-I      intronic
chr17:78307440(+) A-I      intronic
chr17:78306978(+) A-I      intronic
chr17:78271099(+) A-I      intronic
chr17:78240133(+) A-I      intronic
chr17:78283836(+) A-I      intronic
chr17:78365200(+) A-I      intronic
chr17:78240101(+) A-I      intronic
chr17:78295563(+) A-I      intronic
chr17:78283761(+) A-I      intronic
chr17:78239985(+) A-I      intronic
chr17:78294196(+) A-I      3'UTR
chr17:78284315(+) A-I      intronic
chr17:78239636(+) A-I      intronic
chr17:78283753(+) A-I      intronic
chr17:78283736(+) A-I      intronic
chr17:78265948(+) A-I      intronic
chr17:78241129(+) A-I      intronic
chr17:78267135(+) A-I      intronic
chr17:78241093(+) A-I      intronic
chr17:78305318(+) A-I      intronic
chr17:78294544(+) A-I      3'UTR
chr17:78294370(+) A-I      3'UTR
chr17:78294721(+) A-I      3'UTR
chr17:78294573(+) A-I      3'UTR
chr17:78270088(+) A-I      intronic
chr17:78266901(+) A-I      intronic
chr17:78307238(+) A-I      intronic
chr17:78294742(+) A-I      3'UTR
chr17:78278255(+) A-I      intronic
chr17:78294464(+) A-I      3'UTR
chr17:78240481(+) A-I      intronic
chr17:78285775(+) A-I      intronic
chr17:78294596(+) A-I      3'UTR
chr17:78283660(+) A-I      intronic
chr17:78303395(+) A-I      intronic
chr17:78283835(+) A-I      intronic
chr17:78269913(+) A-I      intronic
chr17:78294543(+) A-I      3'UTR
chr17:78284189(+) A-I      intronic
chr17:78294732(+) A-I      3'UTR
chr17:78294390(+) A-I      3'UTR
chr17:78296102(+) A-I      intronic
chr17:78294593(+) A-I      3'UTR
chr17:78269937(+) A-I      intronic
chr17:78250590(+) A-I      intronic
chr17:78294270(+) A-I      3'UTR
chr17:78265937(+) A-I      intronic
chr17:78294183(+) A-I      3'UTR
chr17:78294774(+) A-I      3'UTR
chr17:78259651(+) A-I      intronic
chr17:78249660(+) A-I      intronic
chr17:78285843(+) A-I      intronic
chr17:78342332(+) A-I      intronic
chr17:78365212(+) A-I      intronic
chr17:78250029(+) A-I      intronic
chr17:78283697(+) A-I      intronic
chr17:78305258(+) A-I      intronic
chr17:78279819(+) A-I      intronic
chr17:78307222(+) A-I      intronic
chr17:78266001(+) A-I      intronic
chr17:78342294(+) A-I      intronic
chr17:78295630(+) A-I      intronic
chr17:78285778(+) A-I      intronic
chr17:78296364(+) A-I      intronic
chr17:78250664(+) A-I      intronic
chr17:78269906(+) A-I      intronic
chr17:78303484(+) A-I      intronic
chr17:78285807(+) A-I      intronic
chr17:78266934(+) A-I      intronic
chr17:78364643(+) A-I      intronic
chr17:78305372(+) A-I      intronic
chr17:78275713(+) A-I      intronic
chr17:78275417(+) A-I      intronic
chr17:78278257(+) A-I      intronic
chr17:78271089(+) A-I      intronic
chr17:78275312(+) A-I      intronic
chr17:78240895(+) A-I      intronic
chr17:78296291(+) A-I      intronic
chr17:78239587(+) A-I      intronic
chr17:78315754(+) A-I      intronic
chr17:78285781(+) A-I      intronic
chr17:78275364(+) A-I      intronic
chr17:78255894(+) A-I      intronic
chr17:78240466(+) A-I      intronic
chr17:78296326(+) A-I      intronic
chr17:78266013(+) A-I      intronic
chr17:78249646(+) A-I      intronic
chr17:78241792(+) A-I      intronic
chr17:78267100(+) A-I      intronic
chr17:78276427(+) A-I      intronic
chr17:78249672(+) A-I      intronic
chr17:78241236(+) A-I      intronic
chr17:78240787(+) A-I      intronic
chr17:78296358(+) A-I      intronic
chr17:78250709(+) A-I      intronic
chr17:78364782(+) A-I      intronic
chr17:78263378(+) A-I      intronic
chr17:78315464(+) A-I      intronic
chr17:78315513(+) A-I      intronic
chr17:78364701(+) A-I      intronic
chr17:78269924(+) A-I      intronic
chr17:78296219(+) A-I      intronic
chr17:78271097(+) A-I      intronic
chr17:78303396(+) A-I      intronic
chr17:78284620(+) A-I      intronic
chr17:78285808(+) A-I      intronic
chr17:78315458(+) A-I      intronic
chr17:78250674(+) A-I      intronic
chr17:78279851(+) A-I      intronic
chr17:78275712(+) A-I      intronic
chr17:78293274(+) A-I      Syn:Glu->Glu
chr17:78266064(+) A-I      intronic
chr17:78364363(+) A-I      intronic
chr17:78303451(+) A-I      intronic
chr17:78270594(+) A-I      intronic
chr17:78283721(+) A-I      intronic
chr17:78250736(+) A-I      intronic
chr17:78237219(+) A-I      intronic
chr17:78241063(+) A-I      intronic
chr17:78270660(+) A-I      intronic
chr17:78255929(+) A-I      intronic
chr17:78364686(+) A-I      intronic
chr17:78267123(+) A-I      intronic
chr17:78240128(+) A-I      intronic
chr17:78365135(+) A-I      intronic
chr17:78267575(+) A-I      intronic
chr17:78364661(+) A-I      intronic
chr17:78283673(+) A-I      intronic
chr17:78342337(+) A-I      intronic
chr17:78285671(+) A-I      intronic
chr17:78271130(+) A-I      intronic
chr17:78364290(+) A-I      intronic
chr17:78314636(+) A-I      intronic
chr17:78254370(+) A-I      intronic
chr17:78364336(+) A-I      intronic
chr17:78267515(+) A-I      intronic
chr17:78285658(+) A-I      intronic
chr17:78277570(+) A-I      intronic
chr17:78238915(+) A-I      intronic
chr17:78240440(+) A-I      intronic
chr17:78363025(+) A-I      NonSyn:Tyr->Cys
chr17:78240051(+) A-I      intronic
chr17:78342999(+) A-I      intronic
chr17:78294459(+) A-I      3'UTR
chr17:78294547(+) A-I      3'UTR
chr17:78294758(+) A-I      3'UTR
chr17:78293418(+) A-I      3'UTR
chr17:78294209(+) A-I      3'UTR
chr17:78294712(+) A-I      3'UTR
chr17:78294728(+) A-I      3'UTR
chr17:78294739(+) A-I      3'UTR
chr17:78294621(+) A-I      3'UTR
chr17:78294171(+) A-I      3'UTR
chr17:78294579(+) A-I      3'UTR
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED RNF213
chr17:78261805(+) A-I exon CDS    15342557
chr17:78293274(+) A-I exon CDS    15342557
chr17:78293418(+) A-I exon 3'UTR    15342557
chr17:78294171(+) A-I exon 3'UTR    15342557   //15258596
chr17:78294183(+) A-I exon 3'UTR    15342557   //15258596   //21960545
chr17:78294196(+) A-I exon 3'UTR    15342557   //15258596
chr17:78294209(+) A-I exon 3'UTR    15342557   //15258596   //21960545
chr17:78294253(+) A-I exon 3'UTR    15342557   //15258596   //21960545   //22327324
chr17:78294270(+) A-I exon 3'UTR    15342557   //15258596
chr17:78294464(+) A-I exon 3'UTR    15342557   //15258596
chr17:78294544(+) A-I exon 3'UTR    15342557   //15258596
chr17:78294689(+) A-I exon 3'UTR    15342557   //15258596   //22327324
chr17:78294728(+) A-I exon 3'UTR    15342557   //15258596   //22327324
chr17:78294732(+) A-I exon 3'UTR    15342557
chr17:78294739(+) A-I exon 3'UTR    15342557
chr17:78294742(+) A-I exon 3'UTR    15342557   //15258596   //21960545   //22327324
chr17:78294758(+) A-I exon 3'UTR    15342557   //21960545
chr17:78294774(+) A-I exon 3'UTR    15342557
chr17:78294775(+) A-I exon 3'UTR    15342557   //22327324
chr17:78315458(+) A-I intron -    15342557
chr17:78315464(+) A-I intron -    15342557
chr17:78315638(+) A-I intron -    15342557
chr17:78315736(+) A-I intron -    15342557
chr17:78315754(+) A-I intron -    15342557
chr17:78315808(+) A-I intron -    15342557
chr17:78305372(+) A-I intron -    22327324
chr17:78352745(+) A-I intron -    22327324
chr17:78352912(+) A-I intron -    22327324
chr17:78266013(+) A-I intron -    21960545
chr17:78266064(+) A-I intron -    21960545
chr17:78267135(+) A-I intron -    21960545
chr17:78270506(+) A-I intron -    21960545
chr17:78273973(+) A-I intron -    21960545
chr17:78275103(+) A-I intron -    21960545
chr17:78275156(+) A-I intron -    21960545
chr17:78275312(+) A-I intron -    21960545
chr17:78275321(+) A-I intron -    21960545
chr17:78275324(+) A-I intron -    21960545
chr17:78275364(+) A-I intron -    21960545
chr17:78275713(+) A-I intron -    21960545
chr17:78294525(+) A-I intron -    21960545
chr17:78294543(+) A-I intron -    21960545
chr17:78294209(+) A-G intron -    21725310
chr17:78294253(+) A-G intron -    21725310   //22484847
chr17:78294464(+) A-G intron -    21725310   //22484847
chr17:78294742(+) A-G intron -    21725310   //22484847
chr17:78275312(+) A-G intron -    22484847
chr17:78240016(+) A-G intron -    22484847
chr17:78241119(+) A-G intron -    22484847
chr17:78250674(+) A-G intron -    22484847
chr17:78266058(+) A-G intron -    22484847
chr17:78267505(+) A-G intron -    22484847
chr17:78277443(+) A-G intron -    22484847
chr17:78285807(+) A-G intron -    22484847
chr17:78285808(+) A-G intron -    22484847
chr17:78285877(+) A-G intron -    22484847
chr17:78294689(+) A-G intron -    22484847
chr17:78294712(+) A-G intron -    22484847
chr17:78294728(+) A-G intron -    22484847
chr17:78294732(+) A-G intron -    22484847
chr17:78294774(+) A-G intron -    22484847
chr17:78294775(+) A-G intron -    22484847
chr17:78296102(+) A-G intron -    22484847
chr17:78305372(+) A-G intron -    22484847
chr17:78310709(+) G-A intron -    22484847
chr17:78315638(+) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase RNF213
chr17:78237380-78237381(+) m6A 5'UTR       24284625//24981863//22575960
chr17:78237405-78237406(+) m6A 5'UTR       24284625//24981863//22575960
chr17:78237476-78237477(+) m6A 5'UTR       24284625//22575960
chr17:78237519-78237520(+) m6A CDS       24284625//22575960
chr17:78247048-78247049(+) m6A CDS       24284625
chr17:78247144-78247145(+) m6A CDS       24284625//24981863
chr17:78247159-78247160(+) m6A CDS       24284625//24981863
chr17:78247191-78247192(+) m6A CDS       24284625//24981863
chr17:78252599-78252600(+) m6A CDS//intron       24284625//24981863
chr17:78252698-78252699(+) m6A CDS//intron       24284625
chr17:78261634-78261635(+) m1A CDS       26863196
chr17:78261650-78261651(+) m6A CDS       24284625//24981863
chr17:78261725-78261726(+) m6A CDS       24284625//25456834//24981863//22575960
chr17:78261740-78261741(+) m6A CDS       24284625//25456834//24981863//22575960
chr17:78261944-78261945(+) m6A CDS//exon       24284625//25456834//24981863//22575960//22608085
chr17:78261962-78261963(+) m6A CDS//exon       24284625//25456834//24981863//22575960//22608085
chr17:78262012-78262013(+) m6A CDS//exon       24284625//25456834//24981863//22608085
chr17:78262051-78262052(+) m6A CDS//exon       24284625//25456834//24981863
chr17:78262114-78262115(+) m6A CDS//exon       24284625//24981863
chr17:78262119-78262120(+) m6A CDS//exon       24284625//24981863
chr17:78262126-78262127(+) m6A CDS//exon       24284625//24981863
chr17:78262497-78262498(+) m6A CDS//exon       24284625//24209618//24981863//27773535//22575960
chr17:78262511-78262512(+) m6A CDS//exon       24284625//24209618//24981863//27773535//22575960
chr17:78262542-78262543(+) m6A CDS//exon       24284625//24209618//24981863//27773535//22575960
chr17:78263466-78263467(+) m6A CDS//exon       24284625//24209618//24981863//27773535//22575960
chr17:78263472-78263473(+) m6A CDS//exon       24284625//24209618//24981863//27773535//22575960
chr17:78263519-78263520(+) m6A CDS//exon       24284625//24209618//24981863//27773535//22575960
chr17:78263536-78263537(+) m6A CDS//exon       24284625//24209618//24981863//27773535//22575960
chr17:78263560-78263561(+) m6A CDS//exon       24284625//24209618//24981863//27773535//22575960
chr17:78263602-78263603(+) m6A CDS//exon       24284625//24209618//24981863//22575960
chr17:78268650-78268651(+) m6A CDS//exon       24284625
chr17:78268673-78268674(+) m6A CDS//exon       24284625
chr17:78268680-78268681(+) m6A CDS//exon       24284625
chr17:78268695-78268696(+) m6A CDS//exon       24284625
chr17:78268759-78268760(+) m6A CDS//exon       24284625//24981863//22608085
chr17:78268775-78268776(+) m6A CDS//exon       24284625//24981863//22608085
chr17:78269388-78269389(+) m6A CDS//exon       24284625//24209618//24981863//22608085
chr17:78269423-78269424(+) m6A CDS//exon       24284625//24209618//24981863//22575960//22608085
chr17:78269438-78269439(+) m6A CDS//exon       24284625//24209618//24981863//22575960//22608085
chr17:78269457-78269458(+) m6A CDS//exon       24284625//24209618//24981863//22575960//22608085
chr17:78269464-78269465(+) m6A CDS//exon       24284625//24209618//24981863//22575960//22608085
chr17:78269525-78269526(+) m6A CDS//exon       24284625//24981863//22575960//22608085
chr17:78272140-78272141(+) m6A CDS//exon       24284625//22575960
chr17:78272161-78272162(+) m6A CDS//exon       24284625//22575960
chr17:78272246-78272247(+) m6A CDS//exon       24284625//22575960
chr17:78272257-78272258(+) m6A CDS//exon       24284625//22575960
chr17:78272279-78272280(+) m6A CDS//exon       24284625
chr17:78291054-78291055(+) m6A CDS//exon       24284625//24209618//24981863//22575960
chr17:78292994-78292995(+) m6A CDS//exon       24284625//24209618//24981863//22575960
chr17:78293035-78293036(+) m6A CDS//exon       24284625//24209618//24981863//22575960
chr17:78293053-78293054(+) m6A CDS//exon       24284625//24209618//24981863//22575960
chr17:78293067-78293068(+) m6A CDS//exon       24284625//24209618//24981863//22575960
chr17:78293116-78293117(+) m6A CDS//intron       24284625//24209618//24981863//22608085
chr17:78293478-78293479(+) m6A 3'UTR//intron       24284625//24209618//24981863//22575960//22608085
chr17:78293496-78293497(+) m6A 3'UTR//intron       24284625//24209618//24981863//22575960//22608085
chr17:78293595-78293596(+) m6A 3'UTR//intron       24284625//24209618//24981863//22575960//22608085
chr17:78293669-78293670(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22608085
chr17:78293721-78293722(+) m6A 3'UTR//intron       24284625//24209618//24981863//22608085
chr17:78293746-78293747(+) m6A 3'UTR//intron       24209618//24981863
chr17:78293952-78293953(+) m6A 3'UTR//intron       24981863
chr17:78294015-78294016(+) m6A 3'UTR//intron       24981863
chr17:78294026-78294027(+) m6A 3'UTR//intron       24981863
chr17:78294032-78294033(+) m6A 3'UTR//intron       24981863
chr17:78302155-78302156(+) m6A CDS//exon       24981863
chr17:78302197-78302198(+) m6A CDS//exon       24981863
chr17:78302263-78302264(+) m6A CDS//exon       24284625//24981863//22608085
chr17:78305808-78305809(+) m6A CDS//exon       24284625//24981863//22575960//22608085
chr17:78305830-78305831(+) m6A CDS//exon       24284625//24981863//22575960//22608085
chr17:78305841-78305842(+) m6A CDS//exon       24284625//24981863//22575960//22608085
chr17:78305881-78305882(+) m6A CDS//exon       24284625//24981863//26404942//22575960//22608085
chr17:78305898-78305899(+) m6A CDS//exon       24284625//24981863//26404942//22575960//22608085
chr17:78305961-78305962(+) m6A CDS//exon       24284625//25456834//24981863//22575960//22608085
chr17:78305973-78305974(+) m6A CDS//exon       24284625//25456834//24981863//22575960//22608085
chr17:78306036-78306037(+) m6A CDS//exon       24284625//25456834//24981863//22575960//22608085
chr17:78306213-78306214(+) m6A CDS//exon       24284625//24209618//24981863//26404942//22575960//22608085
chr17:78306234-78306235(+) m6A CDS//exon       24284625//24209618//24981863//26404942//22575960//22608085
chr17:78306247-78306248(+) m6A CDS//exon       24284625//24209618//24981863//26404942//22575960//22608085
chr17:78306251-78306252(+) Am CDS//exon       -
chr17:78306270-78306271(+) m6A CDS//exon       24284625//24209618//24981863//26404942//22575960//22608085
chr17:78306279-78306280(+) m6A CDS//exon       24284625//24981863//26404942//22575960//22608085
chr17:78306300-78306301(+) m6A CDS//exon       24284625//24981863//26404942//22575960//22608085
chr17:78306310-78306311(+) m6A CDS//exon       24284625//24981863//26404942//22575960//22608085
chr17:78306388-78306389(+) m6A CDS//exon       24284625//24981863//22575960
chr17:78307934-78307935(+) m6A CDS//exon       -
chr17:78307941-78307942(+) m6A CDS//exon       -
chr17:78307943-78307944(+) Cm CDS//exon       -
chr17:78309987-78309988(+) m6A CDS//exon       22575960
chr17:78313127-78313128(+) m6A CDS//exon       24284625//25456834//24981863//22575960//22608085
chr17:78313139-78313140(+) m6A CDS//exon       24284625//25456834//24981863//22575960//22608085
chr17:78313271-78313272(+) m6A CDS       24284625//25456834//24981863//22575960//22608085
chr17:78313493-78313494(+) m6A CDS       24284625//25456834//24981863//22575960//22608085
chr17:78313567-78313568(+) m6A CDS       24284625//25456834//24981863//22575960
chr17:78313717-78313718(+) m6A CDS       24284625//22575960
chr17:78313934-78313935(+) m6A CDS       24284625//24981863//22575960
chr17:78313964-78313965(+) m6A CDS       24284625//24981863//22575960
chr17:78318553-78318554(+) m6A CDS       24284625//24981863//22608085
chr17:78318621-78318622(+) m6A CDS       24284625//24981863//26404942//22608085
chr17:78318632-78318633(+) m6A CDS       24284625//24981863//26404942//22608085
chr17:78318664-78318665(+) m6A CDS       24284625//24981863//26404942//22575960//22608085
chr17:78318670-78318671(+) m6A CDS       24284625//24981863//26404942//22575960//22608085
chr17:78318676-78318677(+) m6A CDS       24284625//24981863//22575960//22608085
chr17:78318760-78318761(+) m6A CDS       24284625//24981863//22608085
chr17:78318784-78318785(+) m6A CDS       24284625//24981863//22608085
chr17:78319180-78319181(+) m6A CDS       24284625//24981863//26404942//22608085
chr17:78319235-78319236(+) m6A CDS       24284625//24981863//26404942//22608085
chr17:78319244-78319245(+) m6A CDS       24284625//24981863//26404942//22608085
chr17:78319253-78319254(+) m6A CDS       24284625//24981863//26404942//22608085
chr17:78319398-78319399(+) m6A CDS       24284625//22575960//22608085
chr17:78319413-78319414(+) m6A CDS       24284625//22575960//22608085
chr17:78319497-78319498(+) m6A CDS       24284625//24981863//22575960//22608085
chr17:78319507-78319508(+) m6A CDS       24284625//24981863//22575960//22608085
chr17:78319561-78319562(+) m6A CDS       24284625//24981863//26404942//22575960//22608085
chr17:78319576-78319577(+) m6A CDS       24284625//24981863//26404942//22575960//22608085
chr17:78319678-78319679(+) m6A CDS       24284625//24981863//26404942//22575960
chr17:78319876-78319877(+) m6A CDS       24284625//25456834//24981863//26404942//22575960//22608085
chr17:78319883-78319884(+) m6A CDS       24284625//25456834//24981863//26404942//22575960//22608085
chr17:78319934-78319935(+) m6A CDS       24284625//25456834//24981863//26404942//22575960//22608085
chr17:78319968-78319969(+) m6A CDS       24284625//25456834//24981863//26404942//22575960//22608085
chr17:78320019-78320020(+) m6A CDS       24284625//25456834//24981863//26404942//22575960//22608085
chr17:78320236-78320237(+) m6A CDS       24981863//26404942
chr17:78320239-78320240(+) Cm CDS       -
chr17:78320273-78320274(+) m6A CDS       24981863//26404942
chr17:78320472-78320473(+) m6A CDS       24284625
chr17:78320632-78320633(+) m6A CDS       24284625//22608085
chr17:78320686-78320687(+) m6A CDS       24284625//22608085
chr17:78320709-78320710(+) m6A CDS       24284625//22608085
chr17:78320818-78320819(+) m6A CDS       24284625
chr17:78320856-78320857(+) m6A CDS       24284625
chr17:78320896-78320897(+) m6A CDS       24284625//22575960//22608085
chr17:78320911-78320912(+) m6A CDS       24284625//22575960//22608085
chr17:78320974-78320975(+) m6A CDS       24284625//22575960//22608085
chr17:78321067-78321068(+) m6A CDS       24284625//24981863//22575960//22608085
chr17:78321091-78321092(+) m6A CDS       24284625//24981863//22575960//22608085
chr17:78321124-78321125(+) m6A CDS       24284625//24981863//22575960//22608085
chr17:78321191-78321192(+) m6A CDS       24284625//24981863//22575960//22608085
chr17:78321196-78321197(+) m6A CDS       24284625//24981863//22575960//22608085
chr17:78321277-78321278(+) m6A CDS       24284625//24981863//22575960//22608085
chr17:78321306-78321307(+) m6A CDS       24284625//24981863//22575960//22608085
chr17:78321322-78321323(+) m6A CDS       24981863
chr17:78321869-78321870(+) m6A CDS       24284625//25456834//24981863//22575960//22608085
chr17:78321913-78321914(+) m6A CDS       24284625//25456834//24981863//22575960//22608085
chr17:78322004-78322005(+) m6A CDS       24284625//25456834//24981863//22575960//22608085
chr17:78322057-78322058(+) m6A CDS       24284625//25456834//24981863//22575960//22608085
chr17:78326847-78326848(+) m6A CDS       25456834//24981863//22575960
chr17:78327321-78327322(+) m6A CDS       25456834//24981863//22575960
chr17:78327412-78327413(+) m6A CDS       24284625//25456834//24981863//27371828//22575960
chr17:78327442-78327443(+) m6A CDS       24284625//25456834//24981863//22575960
chr17:78327450-78327451(+) m6A CDS       25456834//24981863//22575960
chr17:78327831-78327832(+) m6A CDS       22575960
chr17:78327885-78327886(+) m6A CDS       -
chr17:78337408-78337409(+) m6A CDS//exon       22608085
chr17:78337457-78337458(+) m6A CDS//exon       22608085
chr17:78338791-78338792(+) m6A exon//intron       24284625
chr17:78338799-78338800(+) m6A exon//intron       24284625
chr17:78338871-78338872(+) m6A exon//intron       24284625
chr17:78338942-78338943(+) m6A exon//intron       24284625
chr17:78339120-78339121(+) m6A exon//intron       24284625
chr17:78339135-78339136(+) m6A exon//intron       24284625
chr17:78353550-78353551(+) m6A exon//intron       27773535
chr17:78354632-78354633(+) m6A CDS//exon       27773535
chr17:78354641-78354642(+) m6A CDS//exon       27773535
chr17:78354652-78354653(+) m6A CDS//exon       27773535
chr17:78355661-78355662(+) m6A exon//intron       -
chr17:78355676-78355677(+) m6A exon//intron       -
chr17:78356271-78356272(+) m6A exon//intron       27773535
chr17:78356301-78356302(+) m6A exon//intron       27773535
chr17:78359401-78359402(+) Gm CDS//exon       -
chr17:78360519-78360520(+) m6A CDS//exon       22575960
chr17:78360551-78360552(+) m6A CDS//exon       22575960
chr17:78360607-78360608(+) m6A CDS//exon       22575960
chr17:78362475-78362476(+) m6A CDS//exon       22608085
chr17:78362502-78362503(+) m6A exon//intron       24981863//22608085
chr17:78362634-78362635(+) m6A exon//intron       24981863//27773535//22608085
chr17:78362749-78362750(+) m6A exon//intron       24981863//22608085
chr17:78362792-78362793(+) m6A exon//intron       22608085
chr17:78362819-78362820(+) m6A exon//intron       24284625//22608085
chr17:78362930-78362931(+) m6A exon//intron       24284625//22608085
chr17:78362943-78362944(+) m6A exon//intron       24284625//22608085
chr17:78362973-78362974(+) m6A CDS//exon       24284625//22608085
chr17:78363010-78363011(+) m6A CDS//exon       24284625
chr17:78363895-78363896(+) m6A CDS//exon       24284625
chr17:78363945-78363946(+) m6A CDS//exon       24284625
chr17:78363953-78363954(+) m6A CDS//exon       24284625
chr17:78363961-78363962(+) m6A CDS//exon       24284625
chr17:78363967-78363968(+) m6A CDS//exon       24284625
chr17:78367152-78367153(+) m6A CDS//exon       24284625
chr17:78367175-78367176(+) m6A CDS//exon       24284625
chr17:78367259-78367260(+) m6A CDS//exon       24284625//24981863//26404942//22575960
chr17:78367339-78367340(+) m6A 3'UTR//exon       24284625//25456834//24981863//26404942//22575960//22608085
chr17:78367366-78367367(+) m6A 3'UTR//exon       24284625//25456834//24981863//26404942//22575960//22608085
chr17:78367378-78367379(+) m6A 3'UTR//exon       24284625//25456834//24981863//26404942//22575960//22608085
chr17:78367395-78367396(+) Cm 3'UTR//exon       -
chr17:78367431-78367432(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr17:78367484-78367485(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr17:78367507-78367508(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr17:78367577-78367578(+) m6A 3'UTR//exon       24284625//24981863//22575960//22608085
chr17:78367602-78367603(+) m6A 3'UTR//exon       24284625//24981863//22575960//22608085
chr17:78367788-78367789(+) m6A 3'UTR//exon       24284625//24981863//26404942//22575960//22608085
chr17:78367796-78367797(+) m6A 3'UTR//exon       24284625//24981863//26404942//22575960//22608085
chr17:78367820-78367821(+) m6A 3'UTR//exon       24284625//24981863//26404942//22575960//22608085
chr17:78367861-78367862(+) m6A 3'UTR//exon       24284625//25456834//24981863//26404942//22575960//22608085
chr17:78367951-78367952(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr17:78367957-78367958(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr17:78367964-78367965(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr17:78368059-78368060(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr17:78368074-78368075(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr17:78368111-78368112(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr17:78368138-78368139(+) m6A 3'UTR//exon       24284625//25456834//24981863//22575960//22608085
chr17:78368203-78368204(+) m6A 3'UTR//exon       24284625//24981863//22575960//22608085
chr17:78368211-78368212(+) m6A 3'UTR//exon       24284625//24209618//24981863//22575960//22608085
chr17:78368217-78368218(+) m6A 3'UTR//exon       24284625//24209618//24981863//22575960//22608085
chr17:78368235-78368236(+) m6A 3'UTR//exon       24284625//24209618//24981863//22575960//22608085
chr17:78368346-78368347(+) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//22575960//22608085
chr17:78368356-78368357(+) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//22575960//22608085
chr17:78368374-78368375(+) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//22575960//22608085
chr17:78368473-78368474(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr17:78368502-78368503(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr17:78368550-78368551(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr17:78368615-78368616(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr17:78368684-78368685(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr17:78368835-78368836(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960
chr17:78369111-78369112(+) m6A 3'UTR//exon       24284625
chr17:78369153-78369154(+) m6A 3'UTR//exon       24284625
chr17:78369233-78369234(+) m6A 3'UTR//exon       24284625//25456834//24981863
chr17:78369249-78369250(+) m6A 3'UTR//exon       24284625//25456834//24981863
chr17:78369280-78369281(+) m6A 3'UTR//exon       24284625//25456834//24981863//22575960
chr17:78369293-78369294(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960
chr17:78369359-78369360(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr17:78369425-78369426(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960
chr17:78369507-78369508(+) m6A 3'UTR//exon       24284625//25456834//24981863
chr17:78369569-78369570(+) m6A 3'UTR//exon       24284625//24981863
chr17:78369614-78369615(+) m6A 3'UTR//exon       24284625
chr17:78369628-78369629(+) m6A 3'UTR//exon       24284625
chr17:78369669-78369670(+) m6A 3'UTR//exon       24284625//24981863
chr17:78369808-78369809(+) m6A 3'UTR//exon       24284625//24981863
chr17:78369907-78369908(+) m6A 3'UTR//exon       24284625//24981863
chr17:78371585-78371586(+) Y 3'UTR       26075521

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-330-5p
Exosome HCC tissues     30542726
Exosome Plasma     23663360
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Blood|Colon cancer cell line (LIM1863)|Fibroblasts|Mesenchymal stem cells     -
RNF213
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HCC cell line (HepG2)     -
Exosome Blood     -
Insoluble cytoplasm HCC cell line (HepG2)     -
Membrane HCC cell line (HepG2)|K562 cells     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus Colon cancer cells     24393600
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Related Drug Information:


Resource Symbol Drug Name PubChem
ID
Function Link  
RNAInter hsa-miR-330-5p
D-Glucose 5793 Drug interaction    RC00007082
Mistletoe lectin-I - Drug interaction    RC00007083
Resource Symbol Drug Name PubChem ID PMID
NoncoRNA hsa-miR-330-5p

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-330-5p
Interactor2: RNF213

Evidence Support:


Weak-Evidence RNA-Seq
Prediction-Evidence miRDB//miRTarBase//miRWalk//Targetscan
Support Database ViRBase

References:


PMID 32232013 Target region None
Source ViRBase Interactor1 expression None
Tissue or cell line HUVEC cells Interactor2 expression Upregulation
Description Then we predicted 320 target genes of these 16 DE miRNAs and constructed a miRNA-mRNA interaction network (Figure 5B, Table S5).

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