Detail Information

Basic Information:


  VIRBase ID:  

HHID00024810

  Virus:  

Hantaan orthohantavirus (Hantaan virus 76-118)

  Host:  

Homo sapiens

  Confidence Score:  

0.6040

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-379-3p:           BACH2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-379-3p BACH2
miRBase
Accession/Entrez ID		 MIMAT0004690 60468
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - BTBD25//IMD60

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-379-3p
rs1267644677 chr14:101022128    ACT/A
rs1376071062 chr14:101022117    A/G
rs1416546339 chr14:101022126    T/C
rs996338461 chr14:101022128    A/G

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR BACH2
chr6:90899800(-) A-I      intronic
chr6:90826758(-) A-I      intronic
chr6:90899773(-) A-I      intronic
chr6:90826705(-) A-I      intronic
chr6:90826698(-) A-I      intronic
chr6:90826701(-) A-I      intronic
chr6:90899801(-) A-I      intronic
chr6:90899791(-) A-I      intronic
chr6:90899774(-) A-I      intronic
chr6:90952844(-) A-I      intronic
chr6:90952832(-) A-I      intronic
chr6:90952737(-) A-I      intronic
chr6:90952736(-) A-I      intronic
chr6:90952695(-) A-I      intronic
chr6:90934834(-) A-I      intronic
chr6:90899897(-) A-I      intronic
chr6:90899882(-) A-I      intronic
chr6:90899763(-) A-I      intronic
chr6:90899748(-) A-I      intronic
chr6:90899725(-) A-I      intronic
chr6:90647400(-) A-I      intronic
chr6:90647413(-) A-I      intronic
chr6:90678648(-) A-I      intronic
chr6:90717113(-) A-I      intronic
chr6:90721473(-) A-I      intronic
chr6:90899289(-) A-I      intronic
chr6:90721733(-) A-I      intronic
chr6:90722517(-) A-I      intronic
chr6:90722555(-) A-I      intronic
chr6:90722556(-) A-I      intronic
chr6:90722563(-) A-I      intronic
chr6:90722589(-) A-I      intronic
chr6:90722610(-) A-I      intronic
chr6:90722612(-) A-I      intronic
chr6:90722645(-) A-I      intronic
chr6:90722646(-) A-I      intronic
chr6:90722652(-) A-I      intronic
chr6:90723622(-) A-I      intronic
chr6:90723730(-) A-I      intronic
chr6:90723754(-) A-I      intronic
chr6:90748584(-) A-I      intronic
chr6:90748634(-) A-I      intronic
chr6:90748707(-) A-I      intronic
chr6:90899883(-) A-I      intronic
chr6:90959391(-) A-I      intronic
chr6:90957167(-) A-I      intronic
chr6:90957087(-) A-I      intronic
chr6:90957066(-) A-I      intronic
chr6:90954866(-) A-I      intronic
chr6:90952894(-) A-I      intronic
chr6:90952845(-) A-I      intronic
chr6:90899240(-) A-I      intronic
chr6:90722445(-) A-I      intronic
chr6:90959382(-) A-I      intronic
chr6:90957083(-) A-I      intronic
chr6:90723506(-) A-I      intronic
chr6:90899822(-) A-I      intronic
chr6:90749225(-) A-I      intronic
chr6:90678644(-) A-I      intronic
chr6:90724351(-) A-I      intronic
chr6:90716564(-) A-I      intronic
chr6:90678910(-) A-I      intronic
chr6:90877353(-) A-I      intronic
chr6:90643500(-) A-I      intronic
chr6:90723502(-) A-I      intronic
chr6:90877987(-) A-I      intronic
chr6:90719486(-) A-I      intronic
chr6:90722564(-) A-I      intronic
chr6:90899827(-) A-I      intronic
chr6:90959453(-) A-I      intronic
chr6:90715949(-) A-I      intronic
chr6:90959379(-) A-I      intronic
chr6:90722183(-) A-I      intronic
chr6:90959245(-) A-I      intronic
chr6:90749255(-) A-I      intronic
chr6:90899690(-) A-I      intronic
chr6:90722114(-) A-I      intronic
chr6:90646085(-) A-I      intronic
chr6:90724377(-) A-I      intronic
chr6:90678911(-) A-I      intronic
chr6:90749287(-) A-I      intronic
chr6:90722301(-) A-I      intronic
chr6:90959463(-) A-I      intronic
chr6:90748592(-) A-I      intronic
chr6:90722211(-) A-I      intronic
chr6:90678901(-) A-I      intronic
chr6:90877351(-) A-I      intronic
chr6:90646140(-) A-I      intronic
chr6:90957227(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED BACH2
chr6:90722296(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase BACH2
chr6:90636692-90636693(-) m6A 3'UTR       27773535
chr6:90636701-90636702(-) m6A 3'UTR       27773535
chr6:90636762-90636763(-) m6A 3'UTR       27773535
chr6:90636783-90636784(-) m6A 3'UTR       27773535
chr6:90637117-90637118(-) m6A 3'UTR       24981863//22608085
chr6:90637123-90637124(-) m6A 3'UTR       24981863//22608085
chr6:90637190-90637191(-) m6A 3'UTR       22608085
chr6:90637208-90637209(-) m6A 3'UTR       22608085
chr6:90637245-90637246(-) m6A 3'UTR       22608085
chr6:90637292-90637293(-) m6A 3'UTR       22608085
chr6:90637783-90637784(-) m6A 3'UTR       27773535
chr6:90637790-90637791(-) m6A 3'UTR       27773535
chr6:90637870-90637871(-) m6A 3'UTR       24209618//27773535//22608085
chr6:90637878-90637879(-) m6A 3'UTR       24209618//27773535//22608085
chr6:90637966-90637967(-) m6A 3'UTR       27773535//22608085
chr6:90637995-90637996(-) m6A 3'UTR       27773535//22608085
chr6:90638126-90638127(-) m6A 3'UTR       27773535//22608085
chr6:90638135-90638136(-) m6A 3'UTR       27773535//22608085
chr6:90638170-90638171(-) m6A 3'UTR       24981863//27773535//22608085
chr6:90638229-90638230(-) m6A 3'UTR       24981863//27773535//27371828//22608085
chr6:90638287-90638288(-) m6A 3'UTR       25456834//24981863//27773535//27371828//22608085
chr6:90638299-90638300(-) m6A 3'UTR       25456834//24981863//27773535//27371828//22608085
chr6:90638311-90638312(-) m6A 3'UTR       25456834//24981863//27773535//22608085
chr6:90638367-90638368(-) m6A 3'UTR       24209618//25456834//24981863//27773535//22608085
chr6:90638497-90638498(-) m6A 3'UTR       24209618//27773535//22608085
chr6:90638584-90638585(-) m6A 3'UTR       27773535//22608085
chr6:90638601-90638602(-) m6A 3'UTR       27773535//22608085
chr6:90638613-90638614(-) m6A 3'UTR       27773535
chr6:90638618-90638619(-) m6A 3'UTR       27773535
chr6:90638642-90638643(-) m6A 3'UTR       27773535
chr6:90638710-90638711(-) m6A 3'UTR       27773535
chr6:90639367-90639368(-) m6A 3'UTR       27773535
chr6:90639430-90639431(-) m6A 3'UTR       27773535
chr6:90639983-90639984(-) Y 3'UTR       26075521
chr6:90641468-90641469(-) m6A 3'UTR       27773535
chr6:90641583-90641584(-) m6A 3'UTR       27773535
chr6:90641602-90641603(-) m6A 3'UTR       27773535
chr6:90641609-90641610(-) m6A 3'UTR       27773535
chr6:90641708-90641709(-) m6A 3'UTR       27773535
chr6:90641742-90641743(-) m6A 3'UTR       27773535
chr6:90641790-90641791(-) m6A 3'UTR       27773535//22608085
chr6:90641848-90641849(-) m6A 3'UTR       27773535//22608085
chr6:90641903-90641904(-) m6A 3'UTR       27773535//22608085
chr6:90642027-90642028(-) m6A 3'UTR       24209618//25456834//24981863//27773535//27371828//22608085
chr6:90642034-90642035(-) m6A 3'UTR       24209618//25456834//24981863//27773535//27371828//22608085
chr6:90642150-90642151(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr6:90642190-90642191(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr6:90642203-90642204(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr6:90642216-90642217(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr6:90642228-90642229(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr6:90642245-90642246(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr6:90642267-90642268(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085
chr6:90642318-90642319(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085
chr6:90642391-90642392(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//22608085
chr6:90642442-90642443(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//22608085
chr6:90642450-90642451(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr6:90642505-90642506(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr6:90642541-90642542(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr6:90642549-90642550(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr6:90642591-90642592(-) m6A CDS       24981863//27773535
chr6:90647899-90647900(-) m6A CDS       27773535
chr6:90647904-90647905(-) m6A CDS       27773535
chr6:90647938-90647939(-) m6A CDS       27773535
chr6:90660135-90660136(-) m6A CDS       27371828
chr6:90660144-90660145(-) m6A CDS       27371828
chr6:90660269-90660270(-) m6A CDS       25456834//27371828
chr6:90660275-90660276(-) m6A CDS       25456834//24981863//27371828
chr6:90660281-90660282(-) m6A CDS       25456834//24981863//27371828
chr6:90660454-90660455(-) m6A CDS       25456834//24981863//27371828//22608085
chr6:90660460-90660461(-) m6A CDS       25456834//24981863//27371828//22608085
chr6:90660544-90660545(-) m6A CDS       25456834//24981863//27773535//22608085
chr6:90660561-90660562(-) m6A CDS       25456834//24981863//27773535//22608085
chr6:90660645-90660646(-) m6A CDS       24981863//27773535//22608085
chr6:90660677-90660678(-) m6A CDS       24981863//27773535//22608085
chr6:90660888-90660889(-) m6A CDS       24209618//25456834//24981863//27773535//27371828//22608085
chr6:90660895-90660896(-) m6A CDS       24209618//25456834//24981863//27773535//27371828//22608085
chr6:90660919-90660920(-) m6A CDS       24209618//25456834//24981863//27773535//27371828//22608085
chr6:90661180-90661181(-) m6A CDS       24209618//25456834//24981863//27773535//27371828//27773536//22608085
chr6:90661276-90661277(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085
chr6:90661351-90661352(-) m6A CDS       25456834//24981863//27773535//27371828//27773536//22608085
chr6:90661360-90661361(-) m6A CDS       25456834//24981863//27773535//27371828//27773536//22608085
chr6:90661420-90661421(-) m6A CDS       25456834//27371828//27773536//22608085
chr6:90661433-90661434(-) m6A CDS       25456834//27371828//27773536//22608085
chr6:90661456-90661457(-) m6A CDS       27371828//27773536//22608085
chr6:90661510-90661511(-) m6A CDS       27371828
chr6:91006289-91006290(-) m6A 5'UTR//exon       27371828

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-379-3p
Exosome Saliva     19627513
Exosome Plasma     23663360
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Fibroblasts|Mesenchymal stem cells     -
BACH2
Chromatin K562 cells     -
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-379-3p
Interactor2: BACH2

Evidence Support:


Weak-Evidence RNA-Seq
Prediction-Evidence miRDB//miRTarBase//miRWalk//Targetscan
Support Database ViRBase

References:


PMID 32232013 Target region None
Source ViRBase Interactor1 expression None
Tissue or cell line HUVEC cells Interactor2 expression Downregulation
Description Then we predicted 320 target genes of these 16 DE miRNAs and constructed a miRNA-mRNA interaction network (Figure 5B, Table S5).

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