Basic Information:

  VIRBase ID:  

HHID00023179

  Virus:  

Japanese encephalitis virus (P3 strain)

  Host:  

Mus musculus

  Confidence Score:  

0.5711

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      mmu-miR-7689-3p:  MIMAT0029909          Stat3:  NM_011486     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mmu-miR-7689-3p	Stat3
miRBase Accession/Entrez ID	MIMAT0029909	20848
Organism	Mus musculus	Mus musculus
Category	miRNA	mRNA
Alias	-	1110034C02Rik//A//Aprf//AW109958

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Stat3	chr11:100887820-100887821(-) Y 3'UTR//exon       26075521 chr11:100888506-100888507(-) m6A 3'UTR//exon       24981863//22608085 chr11:100890099-100890100(-) m6A exon//intron       25412662 chr11:100890107-100890108(-) m6A exon//intron       25412662 chr11:100890114-100890115(-) m6A exon//intron       25412662 chr11:100890204-100890205(-) m6A exon//intron       25412662 chr11:100890210-100890211(-) m6A exon//intron       25412662 chr11:100903449-100903450(-) m6A CDS//exon       25683224//22608085 chr11:100903469-100903470(-) m6A CDS//exon       25683224//22608085 chr11:100903615-100903616(-) m6A CDS//exon       25683224//22608085 chr11:100903710-100903711(-) m6A CDS//exon       25683224//25412662//22608085 chr11:100903730-100903731(-) m6A CDS//exon       25683224//25412662//22608085 chr11:100904909-100904910(-) m6A CDS//exon       25683224//25412662//22608085 chr11:100904921-100904922(-) m6A CDS//exon       25683224//25412662//24981863//22608085 chr11:100905003-100905004(-) m6A CDS//exon       25683224//25412662//24981863//22608085 chr11:100905105-100905106(-) m6A exon//intron       25412662//22608085 chr11:100905116-100905117(-) m6A exon//intron       25412662//22608085 chr11:100905127-100905128(-) m6A exon//intron       25412662//22608085 chr11:100905155-100905156(-) m6A exon//intron       25412662 chr11:100905216-100905217(-) m6A CDS//exon       25412662//22608085 chr11:100905236-100905237(-) m6A CDS//exon       25412662//22608085 chr11:100905257-100905258(-) m6A CDS//exon       25683224//25412662//22608085 chr11:100905276-100905277(-) m6A CDS//exon       25683224//25412662//22608085 chr11:100905297-100905298(-) m6A CDS//exon       25683224//25412662 chr11:100905383-100905384(-) m6A exon//intron       25683224//25412662 chr11:100905610-100905611(-) m6A CDS//exon       25683224//25412662//24981863//22608085 chr11:100905642-100905643(-) m6A CDS//exon       25683224//25412662//24981863//22608085 chr11:100905665-100905666(-) m6A CDS//exon       25683224//25412662//24981863//22608085 chr11:100911329-100911330(-) m6A CDS       25412662//24981863//25569111 chr11:100911347-100911348(-) m6A CDS       25412662//24981863//25569111 chr11:100911378-100911379(-) m6A 5'UTR       25412662//24981863//25569111 chr11:100939258-100939259(-) m6A 5'UTR       25412662//24981863//25569111 chr11:100939433-100939434(-) m6A 5'UTR       25412662//24981863//25569111 chr11:100939446-100939447(-) m6A 5'UTR       25412662//24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mmu-miR-7689-3p
Interactor2: Stat3

Evidence Support:

Weak-Evidence	RNA-Seq
Prediction-Evidence	miRanda
Support Database	ViRBase

References:

PMID	32552669	Target region	None
Source	ViRBase	Interactor1 expression	Downregulation
Tissue or cell line	Mice brain tissues	Interactor2 expression	None
Description	The circRNA-miRNA-mRNA ceRNA network.In total, we detected 569 negatively regulated miRNA-circRNA pairs and 2719 negatively regulated miRNA-mRNA pairs (Additional file 6: Table S5).