Basic Information:

  VIRBase ID:  

HHID00020878

  Virus:  

Japanese encephalitis virus (P3 strain)

  Host:  

Mus musculus

  Confidence Score:  

0.5711

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      mmu-miR-326-3p:  MIMAT0000559          Mapkapk2:  NM_008551     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mmu-miR-326-3p	Mapkapk2
miRBase Accession/Entrez ID	MIMAT0000559	17164
Organism	Mus musculus	Mus musculus
Category	miRNA	mRNA
Alias	-	AA960234//MAPKAP-K2//MK-2//MK2//Rps6//Rps6kc1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Mapkapk2	chr1:131054463-131054464(-) m6A 3'UTR       25412662//24981863 chr1:131054475-131054476(-) m6A 3'UTR       25412662//24981863 chr1:131054962-131054963(-) Y 3'UTR//exon       26075521 chr1:131055021-131055022(-) m6A 3'UTR       25683224//24981863//25456834//25569111 chr1:131055029-131055030(-) m6A 3'UTR       25683224//24981863//25456834//25569111 chr1:131055063-131055064(-) m6A 3'UTR       25683224//24981863//25456834//25569111 chr1:131055783-131055784(-) m6A CDS       25412662//22608085 chr1:131055817-131055818(-) m6A CDS       25412662//22608085 chr1:131055944-131055945(-) m6A CDS       25412662//22608085 chr1:131058371-131058372(-) m6A CDS       25412662//22608085 chr1:131058380-131058381(-) m6A CDS       25412662//22608085 chr1:131058664-131058665(-) m6A CDS       25412662//22608085 chr1:131058751-131058752(-) m6A CDS       25412662//22608085 chr1:131072347-131072348(-) m6A 5'UTR//intron       25412662//22608085 chr1:131072375-131072376(-) m6A 5'UTR//intron       25412662//22608085 chr1:131072380-131072381(-) m6A 5'UTR//intron       25412662 chr1:131072392-131072393(-) m6A 5'UTR//intron       25412662 chr1:131072406-131072407(-) m6A 5'UTR//intron       25412662 chr1:131072434-131072435(-) m6A 5'UTR//intron       25412662 chr1:131072469-131072470(-) m6A 5'UTR//intron       25412662 chr1:131072511-131072512(-) m6A 5'UTR//intron       25412662 chr1:131097311-131097312(-) m6A CDS       25412662 chr1:131097500-131097501(-) m6A CDS       25412662//24981863 chr1:131097591-131097592(-) m6A 5'UTR       25412662 chr1:131097620-131097621(-) m6A 5'UTR       25412662 chr1:131097693-131097694(-) m6A 5'UTR       25412662//24981863//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	mmu-miR-326-3p	Exosome Mast cells     17486113 Exosome B6 BMDCs     22031862 Exosome Bone marrow-derived macrophages     25159140
	Mapkapk2	Axon Motor neurons     24152552 Cytoplasm Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mmu-miR-326-3p
Interactor2: Mapkapk2

Evidence Support:

Weak-Evidence	RNA-Seq
Prediction-Evidence	miRanda
Support Database	ViRBase

References:

PMID	32552669	Target region	None
Source	ViRBase	Interactor1 expression	Downregulation
Tissue or cell line	Mice brain tissues	Interactor2 expression	None
Description	The circRNA-miRNA-mRNA ceRNA network.In total, we detected 569 negatively regulated miRNA-circRNA pairs and 2719 negatively regulated miRNA-mRNA pairs (Additional file 6: Table S5).