Basic Information:

  VIRBase ID:  

HHID00020173

  Virus:  

Japanese encephalitis virus (P3 strain)

  Host:  

Mus musculus

  Confidence Score:  

0.5711

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      mmu-miR-24-3p:  MIMAT0000219          Il4ra:  NM_001363983     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mmu-miR-24-3p	Il4ra
miRBase Accession/Entrez ID	MIMAT0000219	16190
Organism	Mus musculus	Mus musculus
Category	miRNA	mRNA
Alias	-	CD124//I//Il4r

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Il4ra	chr7:125552249-125552250(+) m6A 5'UTR       25412662//25569111 chr7:125552320-125552321(+) m6A 5'UTR//exon       25412662//25569111 chr7:125563333-125563334(+) m6A 5'UTR//intron       25412662//25569111 chr7:125564562-125564563(+) m6A 5'UTR//exon//intron       25412662//25569111 chr7:125564591-125564592(+) m6A 5'UTR//exon//intron       25412662 chr7:125570028-125570029(+) m6A CDS//exon       25569111 chr7:125570046-125570047(+) m6A CDS//exon       25569111 chr7:125575160-125575161(+) m6A 3'UTR//CDS       24981863 chr7:125575533-125575534(+) m6A 3'UTR//CDS       24981863 chr7:125575543-125575544(+) m6A 3'UTR//CDS       25683224//24981863//25569111 chr7:125575587-125575588(+) m6A 3'UTR//CDS       25683224//24981863//25569111 chr7:125575668-125575669(+) m6A 3'UTR//CDS       25683224//25412662//24981863//25569111//22575960 chr7:125575777-125575778(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:125575798-125575799(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:125575834-125575835(+) m6A 3'UTR//CDS       25683224//25412662//24981863//25456834//25569111//22608085//22575960 chr7:125575858-125575859(+) m6A 3'UTR//CDS       25683224//25412662//24981863//25456834//25569111//22608085//22575960 chr7:125575975-125575976(+) Y CDS//exon       26075521 chr7:125576107-125576108(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:125576419-125576420(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:125576473-125576474(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:125576490-125576491(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:125576576-125576577(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:125576581-125576582(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:125576608-125576609(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:125576614-125576615(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:125576949-125576950(+) m6A 3'UTR//CDS       25683224//25412662//24981863//25569111 chr7:125576959-125576960(+) m6A 3'UTR//CDS       25683224//25412662//24981863//25569111 chr7:125577132-125577133(+) m6A 3'UTR       25683224//25412662//24981863//25569111 chr7:125577188-125577189(+) m6A 3'UTR       25683224//25412662//24981863//25569111 chr7:125577375-125577376(+) m6A 3'UTR       25683224//24981863//25569111 chr7:125577447-125577448(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr7:125577510-125577511(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr7:125577542-125577543(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr7:125577551-125577552(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr7:125577557-125577558(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr7:125577607-125577608(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr7:125577613-125577614(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr7:125577687-125577688(+) m6A 3'UTR       25683224//24981863//25456834//25569111 chr7:125577758-125577759(+) m6A 3'UTR       25683224//25412662//24981863//25456834//25569111 chr7:125577811-125577812(+) m6A 3'UTR       25683224//25412662//24981863//25456834//25569111 chr7:125577854-125577855(+) m6A 3'UTR       25683224//25412662//24981863//25569111 chr7:125577918-125577919(+) m6A 3'UTR       25412662//24981863 chr7:125577923-125577924(+) m6A 3'UTR       25412662//24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	mmu-miR-24-3p	Axon DRG neurons     24381269 Exosome Conditioned medium of E13 SMG     28041903 Exosome Serum     28160157 Exosome Mast cells     17486113 Exosome B6 BMDCs     22031862 Exosome Mouse hypothalamic neuronal cell line (GT1-7)     22965126 Exosome Bone marrow-derived macrophages     25159140 Mitochondrion Heart tissue (subsarcolemmal and interfibrillar)     26377859 Nucleus Spermatocytes     18204908 Nucleus Liver cells     21862971

Interaction Network (The top 100 interactions):

Interactor1: mmu-miR-24-3p
Interactor2: Il4ra

Evidence Support:

Weak-Evidence	RNA-Seq
Prediction-Evidence	miRanda
Support Database	ViRBase

References:

PMID	32552669	Target region	None
Source	ViRBase	Interactor1 expression	Downregulation
Tissue or cell line	Mice brain tissues	Interactor2 expression	None
Description	The circRNA-miRNA-mRNA ceRNA network.In total, we detected 569 negatively regulated miRNA-circRNA pairs and 2719 negatively regulated miRNA-mRNA pairs (Additional file 6: Table S5).