Basic Information:

  VIRBase ID:  

HHID00019893

  Virus:  

Japanese encephalitis virus (P3 strain)

  Host:  

Mus musculus

  Confidence Score:  

0.5711

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      mmu-miR-132-3p:  MIMAT0000144          Jak2:  NM_001048177     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mmu-miR-132-3p	Jak2
miRBase Accession/Entrez ID	MIMAT0000144	16452
Organism	Mus musculus	Mus musculus
Category	miRNA	mRNA
Alias	-	Fd17

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Jak2	chr19:29252036-29252037(+) m6A 5'UTR       25412662//25569111 chr19:29275041-29275042(+) m6A CDS       25683224//22608085 chr19:29276800-29276801(+) m6A CDS       25683224//22608085 chr19:29276834-29276835(+) m6A CDS       25683224//22608085 chr19:29276861-29276862(+) m6A CDS       25683224//22608085 chr19:29276866-29276867(+) m6A CDS       25683224//22608085 chr19:29282447-29282448(+) m6A CDS       25683224//25412662//22608085 chr19:29282454-29282455(+) m6A CDS       25683224//25412662//22608085 chr19:29282471-29282472(+) m6A CDS       25683224//25412662//22608085 chr19:29282479-29282480(+) m6A CDS       25683224//25412662//22608085 chr19:29282505-29282506(+) m6A CDS       25683224//25412662//22608085 chr19:29282607-29282608(+) m6A CDS       25683224//25412662//22608085 chr19:29282623-29282624(+) m6A CDS       25412662//22608085 chr19:29282634-29282635(+) m6A CDS       25412662//22608085 chr19:29286321-29286322(+) m6A CDS       25683224//22608085 chr19:29286343-29286344(+) m6A CDS       25683224//22608085 chr19:29286348-29286349(+) m6A CDS       25683224//22608085 chr19:29286377-29286378(+) m6A CDS       25683224//22608085 chr19:29287923-29287924(+) m6A CDS       25683224//22608085 chr19:29287972-29287973(+) m6A CDS       25683224//22608085 chr19:29287982-29287983(+) m6A CDS       25683224//22608085 chr19:29288000-29288001(+) m6A CDS       25683224//22608085 chr19:29288026-29288027(+) m6A CDS       25683224//22608085 chr19:29288039-29288040(+) m6A CDS       25683224//22608085 chr19:29291290-29291291(+) m6A CDS       25412662//24981863//22608085 chr19:29295698-29295699(+) m6A CDS       25683224//22608085 chr19:29295726-29295727(+) m6A CDS       25683224//22608085 chr19:29298364-29298365(+) m6A CDS       25683224//22608085 chr19:29298381-29298382(+) m6A CDS       25683224//22608085 chr19:29298635-29298636(+) m6A CDS       25683224//25569111//22608085 chr19:29298648-29298649(+) m6A CDS       25683224//25569111//22608085 chr19:29298669-29298670(+) m6A CDS       25683224//25569111//22608085 chr19:29299485-29299486(+) m6A CDS       25683224//22608085 chr19:29299514-29299515(+) m6A CDS       25683224//22608085 chr19:29299556-29299557(+) m6A CDS       25683224//22608085 chr19:29299562-29299563(+) m6A CDS       25683224//22608085 chr19:29299584-29299585(+) m6A CDS       25683224//22608085 chr19:29300954-29300955(+) m6A CDS       25683224//22608085 chr19:29300985-29300986(+) m6A CDS       25683224//22608085 chr19:29301017-29301018(+) m6A CDS       25683224//22608085 chr19:29301665-29301666(+) m6A CDS       25683224//24981863 chr19:29301678-29301679(+) m6A CDS       25683224//24981863 chr19:29301705-29301706(+) m6A CDS       25683224//24981863 chr19:29301938-29301939(+) m6A CDS       25683224//24981863 chr19:29301953-29301954(+) m6A CDS       25683224//24981863 chr19:29301974-29301975(+) m6A CDS       25683224//24981863 chr19:29301992-29301993(+) m6A CDS       25683224//24981863 chr19:29302022-29302023(+) m6A CDS       25683224//24981863 chr19:29310956-29310957(+) m6A CDS       25683224//24981863//25569111 chr19:29311768-29311769(+) m6A CDS       25683224//25456834//24981863//25412662//25569111//22608085 chr19:29311801-29311802(+) m6A CDS       25683224//25456834//24981863//25412662//25569111//22608085 chr19:29311831-29311832(+) m6A CDS       25683224//25456834//24981863//25412662//25569111//22608085 chr19:29311870-29311871(+) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111//22608085 chr19:29311879-29311880(+) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111//22608085 chr19:29311888-29311889(+) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111//22608085 chr19:29311894-29311895(+) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111//22608085 chr19:29311954-29311955(+) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111//22608085 chr19:29312019-29312020(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr19:29312111-29312112(+) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085 chr19:29312186-29312187(+) m6A 3'UTR       24981863//25456834//26404942//22608085 chr19:29312564-29312565(+) m6A 3'UTR       24981863//22608085 chr19:29312657-29312658(+) m6A 3'UTR       25683224//24981863//25456834//22608085 chr19:29312693-29312694(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr19:29312778-29312779(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr19:29312790-29312791(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr19:29312860-29312861(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr19:29313014-29313015(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	mmu-miR-132-3p	Axon DRG neurons     24381269 Dendrite Hippocampal neuroprogenitors     20506192 Exosome Conditioned medium of E13 SMG     28041903 Exosome B6 BMDCs     22031862 Exosome Mouse hypothalamic neuronal cell line (GT1-7)     22965126 Exosome Bone marrow-derived macrophages     25159140
	Jak2	Nucleus Neuroblastoma cell line (N2A)     22406755 Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mmu-miR-132-3p
Interactor2: Jak2

Evidence Support:

Weak-Evidence	RNA-Seq
Prediction-Evidence	miRanda
Support Database	ViRBase

References:

PMID	32552669	Target region	None
Source	ViRBase	Interactor1 expression	Downregulation
Tissue or cell line	Mice brain tissues	Interactor2 expression	None
Description	The circRNA-miRNA-mRNA ceRNA network.In total, we detected 569 negatively regulated miRNA-circRNA pairs and 2719 negatively regulated miRNA-mRNA pairs (Additional file 6: Table S5).