Basic Information:
VIRBase ID: HHID00019216
Virus: Hepacivirus C (Hepatitis C virus genotype 2,HCV)
Host: Homo sapiens
Confidence Score: 0.8935
Interaction Type: Host-Host interaction
Predicted Binding:
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Interactor Information:
Interactor1
Interactor2
Symbol
hsa-miR-30d-5p
UBE2R2
miRBase Accession/Entrez ID
MIMAT0000245
54926
Organism
Homo sapiens
Homo sapiens
Category
miRNA
mRNA
Alias
-
CDC34B//E2-CDC34B//UBC3B
ncRNA SNP information:
Resource
Symbol
SNP ID
SNP Position
Ref/Alt
miRNASNP-v3
hsa-miR-30d-5p
RNA Editing:
Resource
Symbol
Editing Position
Change
Genetic Region
RADAR
UBE2R2
Resource
Symbol
Editing Position
Change
SeqReg
exReg
PMID
DARNED
UBE2R2
RNA Modification:
Resource
Symbol
ModificationPosition
Type
Genomic Context
PMID
RMBase
UBE2R2
RNA Localization:
Resource
Symbol
Subcellular Localization
Tissue or Cell Line
PMID
RNALocate
hsa-miR-30d-5p
UBE2R2
Related Drug Information:
Resource
Symbol
Drug Name
PubChem ID
Function
ncDR
hsa-miR-30d-5p
Resource
Symbol
Drug Name
PubChem ID
Function
Link
RNAInter
hsa-miR-30d-5p
Resource
Symbol
Drug Name
PubChem ID
PMID
NoncoRNA
hsa-miR-30d-5p
Interaction Network (The top 100 interactions) :
Interactor1: hsa-miR-30d-5p
Interactor2: UBE2R2
Evidence Support:
Strong-Evidence
qRT-PCR
Weak-Evidence
miRNA array
Prediction-Evidence
miRanda//PicTar//RNAHybrid//Targetscan
Support Database
VIRmiRNA
References:
PMID
23418453
Target region
3'UTR
Source
VIRmiRNA
Interactor1 expression
None
Tissue or cell line
Huh7.5 cells
Interactor2 expression
None
Description
Seven miRNAs (miR-30b, miR-30c, miR-130a, miR-192, miR-301, miR-324-5p, and miR-565) were down-regulated in HCV-infected Huh7.5 cells (p<0.05) and subsequently up-regulated following interferon-alpha treatment (p<0.01). The miR-30(a-d) cluster and miR-130a/301 and their putative mRNA targets were predicted to be associated with cellular pathways that involve Hepatitis C virus entry, propagation and host response to viral infection.