Detail Information

Basic Information:


  VIRBase ID:  

HHID00019191

  Virus:  

Hepacivirus C (Hepatitis C virus genotype 2,HCV)

  Host:  

Homo sapiens

  Confidence Score:  

0.8935

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-30d-5p:           PPP1R12A:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-30d-5p PPP1R12A
miRBase
Accession/Entrez ID
MIMAT0000245 4659
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - GUBS//M130//MBS//MYPT1

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-30d-5p
rs1203910650 chr8:134804928    G/A
rs1244539439 chr8:134804930    G/T
rs1441595222 chr8:134804927    C/A
rs1441595222 chr8:134804927    C/T
rs374432132 chr8:134804931    G/A
rs776972352 chr8:134804925    G/A
rs1187386485 chr8:134804934    G/A
rs1373057893 chr8:134804937    TACA/T

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR PPP1R12A
chr12:80209201(-) A-I      intronic
chr12:80253607(-) A-I      intronic
chr12:80209214(-) A-I      intronic
chr12:80253594(-) A-I      intronic
chr12:80253637(-) A-I      intronic
chr12:80253625(-) A-I      intronic
chr12:80253647(-) A-I      intronic
chr12:80253612(-) A-I      intronic
chr12:80209218(-) A-I      intronic
chr12:80209188(-) A-I      intronic
chr12:80193736(-) A-I      intronic
chr12:80193617(-) A-I      intronic
chr12:80193162(-) A-I      intronic
chr12:80193039(-) A-I      intronic
chr12:80193050(-) A-I      intronic
chr12:80193104(-) A-I      intronic
chr12:80193741(-) A-I      intronic
chr12:80209189(-) A-I      intronic
chr12:80194606(-) A-I      intronic
chr12:80194610(-) A-I      intronic
chr12:80194611(-) A-I      intronic
chr12:80194642(-) A-I      intronic
chr12:80194646(-) A-I      intronic
chr12:80194674(-) A-I      intronic
chr12:80194694(-) A-I      intronic
chr12:80194708(-) A-I      intronic
chr12:80194718(-) A-I      intronic
chr12:80195003(-) A-I      intronic
chr12:80195009(-) A-I      intronic
chr12:80195013(-) A-I      intronic
chr12:80195073(-) A-I      intronic
chr12:80237110(-) A-I      intronic
chr12:80237613(-) A-I      intronic
chr12:80237662(-) A-I      intronic
chr12:80237663(-) A-I      intronic
chr12:80237680(-) A-I      intronic
chr12:80237756(-) A-I      intronic
chr12:80237772(-) A-I      intronic
chr12:80239504(-) A-I      intronic
chr12:80193726(-) A-I      intronic
chr12:80252989(-) A-I      intronic
chr12:80297840(-) A-I      intronic
chr12:80194581(-) A-I      intronic
chr12:80300492(-) A-I      intronic
chr12:80300500(-) A-I      intronic
chr12:80300538(-) A-I      intronic
chr12:80300544(-) A-I      intronic
chr12:80300619(-) A-I      intronic
chr12:80300653(-) A-I      intronic
chr12:80194598(-) A-I      intronic
chr12:80317785(-) A-I      intronic
chr12:80300733(-) A-I      intronic
chr12:80303349(-) A-I      intronic
chr12:80303445(-) A-I      intronic
chr12:80303664(-) A-I      intronic
chr12:80324417(-) A-I      intronic
chr12:80303731(-) A-I      intronic
chr12:80303752(-) A-I      intronic
chr12:80303753(-) A-I      intronic
chr12:80304121(-) A-I      intronic
chr12:80304148(-) A-I      intronic
chr12:80304199(-) A-I      intronic
chr12:80317566(-) A-I      intronic
chr12:80317620(-) A-I      intronic
chr12:80324370(-) A-I      intronic
chr12:80318250(-) A-I      intronic
chr12:80318301(-) A-I      intronic
chr12:80318333(-) A-I      intronic
chr12:80318391(-) A-I      intronic
chr12:80318426(-) A-I      intronic
chr12:80318428(-) A-I      intronic
chr12:80320747(-) A-I      intronic
chr12:80318436(-) A-I      intronic
chr12:80320103(-) A-I      intronic
chr12:80320165(-) A-I      intronic
chr12:80320174(-) A-I      intronic
chr12:80320175(-) A-I      intronic
chr12:80320194(-) A-I      intronic
chr12:80320203(-) A-I      intronic
chr12:80320198(-) A-I      intronic
chr12:80193176(-) A-I      intronic
chr12:80193661(-) A-I      intronic
chr12:80193568(-) A-I      intronic
chr12:80193172(-) A-I      intronic
chr12:80193148(-) A-I      intronic
chr12:80193061(-) A-I      intronic
chr12:80178523(-) A-I      intronic
chr12:80263887(-) A-I      intronic
chr12:80303391(-) A-I      intronic
chr12:80303335(-) A-I      intronic
chr12:80217644(-) A-I      intronic
chr12:80263890(-) A-I      intronic
chr12:80193057(-) A-I      intronic
chr12:80240416(-) A-I      intronic
chr12:80273106(-) A-I      intronic
chr12:80263883(-) A-I      intronic
chr12:80300562(-) A-I      intronic
chr12:80263892(-) A-I      intronic
chr12:80304204(-) A-I      intronic
chr12:80303478(-) A-I      intronic
chr12:80320244(-) A-I      intronic
chr12:80318320(-) A-I      intronic
chr12:80193555(-) A-I      intronic
chr12:80317657(-) A-I      intronic
chr12:80303473(-) A-I      intronic
chr12:80318256(-) A-I      intronic
chr12:80263889(-) A-I      intronic
chr12:80319820(-) A-I      intronic
chr12:80324490(-) A-I      intronic
chr12:80237623(-) A-I      intronic
chr12:80193763(-) A-I      intronic
chr12:80290216(-) A-I      intronic
chr12:80193573(-) A-I      intronic
chr12:80303403(-) A-I      intronic
chr12:80176981(-) A-I      intronic
chr12:80237378(-) A-I      intronic
chr12:80194690(-) A-I      intronic
chr12:80246111(-) A-I      intronic
chr12:80320759(-) A-I      intronic
chr12:80263893(-) A-I      intronic
chr12:80193099(-) A-I      intronic
chr12:80194869(-) A-I      intronic
chr12:80236546(-) A-I      intronic
chr12:80303675(-) A-I      intronic
chr12:80193586(-) A-I      intronic
chr12:80193676(-) A-I      intronic
chr12:80263894(-) A-I      intronic
chr12:80263891(-) A-I      intronic
chr12:80317631(-) A-I      intronic
chr12:80193102(-) A-I      intronic
chr12:80318459(-) A-I      intronic
chr12:80317742(-) A-I      intronic
chr12:80237297(-) A-I      intronic
chr12:80317606(-) A-I      intronic
chr12:80193154(-) A-I      intronic
chr12:80237276(-) A-I      intronic
chr12:80263882(-) A-I      intronic
chr12:80318409(-) A-I      intronic
chr12:80177153(-) A-I      intronic
chr12:80176987(-) A-I      intronic
chr12:80320217(-) A-I      intronic
chr12:80304030(-) A-I      intronic
chr12:80234917(-) A-I      intronic
chr12:80237236(-) A-I      intronic
chr12:80193067(-) A-I      intronic
chr12:80318481(-) A-I      intronic
chr12:80234916(-) A-I      intronic
chr12:80193569(-) A-I      intronic
chr12:80317741(-) A-I      intronic
chr12:80318408(-) A-I      intronic
chr12:80215497(-) A-I      intronic
chr12:80193515(-) A-I      intronic
chr12:80193044(-) A-I      intronic
chr12:80177020(-) A-I      intronic
chr12:80193053(-) A-I      intronic
chr12:80212255(-) A-I      intronic
chr12:80237609(-) A-I      intronic
chr12:80320784(-) A-I      intronic
chr12:80300588(-) A-I      intronic
chr12:80320221(-) A-I      intronic
chr12:80236050(-) A-I      intronic
chr12:80178491(-) A-I      intronic
chr12:80193167(-) A-I      intronic
chr12:80196445(-) A-I      intronic
chr12:80242998(-) A-I      intronic
chr12:80317724(-) A-I      intronic
chr12:80300629(-) A-I      intronic
chr12:80215421(-) A-I      intronic
chr12:80212256(-) A-I      intronic
chr12:80212241(-) A-I      intronic
chr12:80239443(-) A-I      intronic
chr12:80303730(-) A-I      intronic
chr12:80213525(-) A-I      intronic
chr12:80176965(-) A-I      intronic
chr12:80237246(-) A-I      intronic
chr12:80246179(-) A-I      intronic
chr12:80193203(-) A-I      intronic
chr12:80193689(-) A-I      intronic
chr12:80193677(-) A-I      intronic
chr12:80320780(-) A-I      intronic
chr12:80234981(-) A-I      intronic
chr12:80193707(-) A-I      intronic
chr12:80177132(-) A-I      intronic
chr12:80194645(-) A-I      intronic
chr12:80320924(-) A-I      intronic
chr12:80303393(-) A-I      intronic
chr12:80193196(-) A-I      intronic
chr12:80320252(-) A-I      intronic
chr12:80196466(-) A-I      intronic
chr12:80320946(-) A-I      intronic
chr12:80237362(-) A-I      intronic
chr12:80193623(-) A-I      intronic
chr12:80300666(-) A-I      intronic
chr12:80185276(-) A-I      intronic
chr12:80304087(-) A-I      intronic
chr12:80319787(-) A-I      intronic
chr12:80311004(-) A-I      intronic
chr12:80300667(-) A-I      intronic
chr12:80193101(-) A-I      intronic
chr12:80196449(-) A-I      intronic
chr12:80195079(-) A-I      intronic
chr12:80319763(-) A-I      intronic
chr12:80318482(-) A-I      intronic
chr12:80292227(-) A-I      intronic
chr12:80236062(-) A-I      intronic
chr12:80317676(-) A-I      intronic
chr12:80193778(-) A-I      intronic
chr12:80212304(-) A-I      intronic
chr12:80194582(-) A-I      intronic
chr12:80249208(-) A-I      intronic
chr12:80215405(-) A-I      intronic
chr12:80193713(-) A-I      intronic
chr12:80317793(-) A-I      intronic
chr12:80193585(-) A-I      intronic
chr12:80235887(-) A-I      intronic
chr12:80303431(-) A-I      intronic
chr12:80213631(-) A-I      intronic
chr12:80237622(-) A-I      intronic
chr12:80320890(-) A-I      intronic
chr12:80178622(-) A-I      intronic
chr12:80196415(-) A-I      intronic
chr12:80193025(-) A-I      intronic
chr12:80304177(-) A-I      intronic
chr12:80317660(-) A-I      intronic
chr12:80317588(-) A-I      intronic
chr12:80320861(-) A-I      intronic
chr12:80194662(-) A-I      intronic
chr12:80318388(-) A-I      intronic
chr12:80303457(-) A-I      intronic
chr12:80304258(-) A-I      intronic
chr12:80193517(-) A-I      intronic
chr12:80194586(-) A-I      intronic
chr12:80318498(-) A-I      intronic
chr12:80194652(-) A-I      intronic
chr12:80246033(-) A-I      intronic
chr12:80320732(-) A-I      intronic
chr12:80317748(-) A-I      intronic
chr12:80318495(-) A-I      intronic
chr12:80320130(-) A-I      intronic
chr12:80300605(-) A-I      intronic
chr12:80304135(-) A-I      intronic
chr12:80213517(-) A-I      intronic
chr12:80316804(-) A-I      intronic
chr12:80185200(-) A-I      intronic
chr12:80300627(-) A-I      intronic
chr12:80237678(-) A-I      intronic
chr12:80237589(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED PPP1R12A
chr12:80263877(-) A-I intron -    22028664
chr12:80263879(-) A-I intron -    22028664
chr12:80263882(-) A-I intron -    22028664
chr12:80263883(-) A-I intron -    22028664
chr12:80263887(-) A-I intron -    22028664
chr12:80263889(-) A-I intron -    22028664
chr12:80263890(-) A-I intron -    22028664
chr12:80263891(-) A-I intron -    22028664
chr12:80263892(-) A-I intron -    22028664
chr12:80263893(-) A-I intron -    22028664
chr12:80263894(-) A-I intron -    22028664
chr12:80213525(-) A-I intron -    21960545
chr12:80193025(-) A-G intron -    22484847
chr12:80193053(-) A-G intron -    22484847
chr12:80193057(-) A-G intron -    22484847
chr12:80193585(-) A-G intron -    22484847
chr12:80193586(-) A-G intron -    22484847
chr12:80193689(-) A-G intron -    22484847
chr12:80193763(-) A-G intron -    22484847
chr12:80168415(-) T-A exon 3'UTR    22484847
chr12:80177075(-) G-T intron -    22484847
chr12:80177132(-) A-G intron -    22484847
chr12:80185355(-) T-C intron -    22484847
chr12:80193099(-) A-G intron -    22484847
chr12:80193707(-) A-G intron -    22484847
chr12:80193713(-) A-G intron -    22484847
chr12:80194582(-) A-G intron -    22484847
chr12:80194645(-) A-G intron -    22484847
chr12:80194652(-) A-G intron -    22484847
chr12:80194662(-) A-G intron -    22484847
chr12:80194690(-) A-G intron -    22484847
chr12:80195079(-) A-G intron -    22484847
chr12:80209304(-) C-T intron -    22484847
chr12:80212256(-) A-G intron -    22484847
chr12:80213525(-) A-G intron -    22484847
chr12:80234917(-) A-G intron -    22484847
chr12:80237236(-) A-G intron -    22484847
chr12:80237246(-) A-G intron -    22484847
chr12:80237362(-) A-G intron -    22484847
chr12:80237378(-) A-G intron -    22484847
chr12:80237609(-) A-G intron -    22484847
chr12:80237622(-) A-G intron -    22484847
chr12:80237623(-) A-G intron -    22484847
chr12:80237678(-) A-G intron -    22484847
chr12:80243176(-) T-C intron -    22484847
chr12:80292227(-) A-G intron -    22484847
chr12:80297230(-) G-T intron -    22484847
chr12:80300562(-) A-G intron -    22484847
chr12:80300588(-) A-G intron -    22484847
chr12:80300629(-) A-G intron -    22484847
chr12:80300667(-) A-G intron -    22484847
chr12:80303335(-) A-G intron -    22484847
chr12:80303391(-) A-G intron -    22484847
chr12:80303393(-) A-G intron -    22484847
chr12:80303403(-) A-G intron -    22484847
chr12:80303431(-) A-G intron -    22484847
chr12:80303457(-) A-G intron -    22484847
chr12:80303473(-) A-G intron -    22484847
chr12:80303478(-) A-G intron -    22484847
chr12:80303730(-) A-G intron -    22484847
chr12:80304030(-) A-G intron -    22484847
chr12:80304087(-) A-G intron -    22484847
chr12:80304153(-) C-T intron -    22484847
chr12:80304204(-) A-G intron -    22484847
chr12:80304258(-) A-G intron -    22484847
chr12:80316804(-) A-G intron -    22484847
chr12:80317588(-) A-G intron -    22484847
chr12:80317606(-) A-G intron -    22484847
chr12:80317631(-) A-G intron -    22484847
chr12:80317657(-) A-G intron -    22484847
chr12:80317660(-) A-G intron -    22484847
chr12:80317676(-) A-G intron -    22484847
chr12:80317724(-) A-G intron -    22484847
chr12:80317741(-) A-G intron -    22484847
chr12:80317742(-) A-G intron -    22484847
chr12:80317748(-) A-G intron -    22484847
chr12:80317793(-) A-G intron -    22484847
chr12:80318320(-) A-G intron -    22484847
chr12:80318408(-) A-G intron -    22484847
chr12:80318409(-) A-G intron -    22484847
chr12:80318481(-) A-G intron -    22484847
chr12:80318482(-) A-G intron -    22484847
chr12:80318495(-) A-G intron -    22484847
chr12:80318498(-) A-G intron -    22484847
chr12:80319820(-) A-G intron -    22484847
chr12:80320217(-) A-G intron -    22484847
chr12:80320221(-) A-G intron -    22484847
chr12:80320244(-) A-G intron -    22484847
chr12:80320732(-) A-G intron -    22484847
chr12:80320759(-) A-G intron -    22484847
chr12:80320780(-) A-G intron -    22484847
chr12:80320784(-) A-G intron -    22484847
chr12:80320890(-) A-G intron -    22484847
chr12:80320924(-) A-G intron -    22484847
chr12:80324490(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase PPP1R12A
chr12:80169305-80169306(-) m6A 3'UTR       24981863//27773535//22608085
chr12:80169325-80169326(-) m6A 3'UTR       24981863//26404942//27773535//22608085
chr12:80169432-80169433(-) m6A 3'UTR       24981863//26404942//27773535//22608085
chr12:80169489-80169490(-) m6A 3'UTR       24284625//24981863//26404942//27773535//22608085
chr12:80169612-80169613(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085
chr12:80169656-80169657(-) m6A 3'UTR       24284625//24209618//24981863//28052920//27773535//22575960//22608085
chr12:80169720-80169721(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//28052920//27773535//27371828//22608085
chr12:80169772-80169773(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//28052920//27773535//27371828//22608085
chr12:80169784-80169785(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//28052920//27773535//27371828//22608085
chr12:80172432-80172433(-) m6A exon//intron       24981863//27773535//27371828
chr12:80172475-80172476(-) m6A exon//intron       27773535//27371828
chr12:80175639-80175640(-) m6A 3'UTR//CDS//exon       27773535
chr12:80175686-80175687(-) m6A exon//intron       27773535
chr12:80175758-80175759(-) m6A exon//intron       27773535
chr12:80180192-80180193(-) m6A 3'UTR//CDS//exon//intron       27773535
chr12:80180249-80180250(-) m6A 3'UTR//CDS//exon//intron       24981863//27773535
chr12:80180904-80180905(-) m6A exon//intron       27773535
chr12:80181017-80181018(-) m6A exon//intron       27773535
chr12:80181175-80181176(-) m6A exon//intron       27773535
chr12:80181317-80181318(-) m6A exon//intron       27773535
chr12:80181355-80181356(-) m6A exon//intron       27773535
chr12:80182475-80182476(-) m6A 3'UTR//CDS//exon       24981863//27773535
chr12:80182555-80182556(-) m6A 3'UTR//CDS//exon       27773535
chr12:80183450-80183451(-) m6A CDS//intron       24981863
chr12:80183587-80183588(-) m6A intron       24981863
chr12:80187647-80187648(-) m6A CDS//exon       24981863//27773535//27371828//22608085
chr12:80187676-80187677(-) m6A CDS//exon       24981863//28052920//27773535//27371828//22575960//22608085
chr12:80187687-80187688(-) m6A CDS//exon       24981863//28052920//27773535//27371828//22575960//22608085
chr12:80187693-80187694(-) m6A CDS//exon       24981863//28052920//27773535//27371828//22575960//22608085
chr12:80189425-80189426(-) m6A CDS//exon       24981863//28052920//27773535//27371828//22575960//22608085
chr12:80190629-80190630(-) m6A CDS//exon       24981863//27773535//22608085
chr12:80191001-80191002(-) m6A CDS//exon       24981863//27773535//22608085
chr12:80191024-80191025(-) m6A CDS//exon       24981863//27773535//22608085
chr12:80191049-80191050(-) m6A CDS//exon       24981863//27773535//22608085
chr12:80191064-80191065(-) m6A CDS//exon       24981863//27773535//22608085
chr12:80191103-80191104(-) m6A CDS//exon       24981863//27773535//22608085
chr12:80191111-80191112(-) m6A CDS//exon       24981863//27773535//22608085
chr12:80191138-80191139(-) m6A CDS//exon       24981863//27773535//22608085
chr12:80192294-80192295(-) m6A CDS//exon       24981863//27773535//22608085
chr12:80192303-80192304(-) m6A CDS//exon       24981863//27773535//22608085
chr12:80200094-80200095(-) m6A CDS//intron       27773535
chr12:80200650-80200651(-) m6A exon//intron       27773535
chr12:80202265-80202266(-) m6A CDS//exon       27773535
chr12:80202338-80202339(-) m6A CDS//exon       27773535
chr12:80203604-80203605(-) m6A CDS       27773535
chr12:80203712-80203713(-) m6A CDS       24981863//27773535
chr12:80211287-80211288(-) m6A CDS       27773535
chr12:80211292-80211293(-) m6A CDS       27773535
chr12:80214556-80214557(-) m6A CDS       27773535
chr12:80214653-80214654(-) m6A CDS       24981863//22575960
chr12:80214689-80214690(-) m6A CDS       24981863
chr12:80214867-80214868(-) m6A CDS       24981863//27773535
chr12:80214887-80214888(-) m6A CDS       24981863//27773535
chr12:80214926-80214927(-) m6A CDS       24981863//27773535
chr12:80215904-80215905(-) m6A CDS//intron       24981863//27773535
chr12:80215938-80215939(-) m6A CDS//intron       24981863//27773535
chr12:80215963-80215964(-) m6A CDS//intron       24981863//27773535
chr12:80221968-80221969(-) m6A exon//intron       27773535
chr12:80222191-80222192(-) m6A CDS//exon       27773535
chr12:80222205-80222206(-) m6A CDS//exon       27773535
chr12:80226240-80226241(-) m1A CDS//exon       26863196
chr12:80226289-80226290(-) m6A exon//intron       24209618//24981863//27773535
chr12:80226315-80226316(-) m6A exon//intron       24981863//27773535
chr12:80226354-80226355(-) m6A exon//intron       24981863//27773535
chr12:80242614-80242615(-) m6A 5'UTR//intron       27773535
chr12:80328492-80328493(-) m6A CDS       27773536
chr12:80328611-80328612(-) m6A CDS       25456834//27371828//27773536
chr12:80328643-80328644(-) m6A CDS       25456834//27371828//27773536
chr12:80328689-80328690(-) Cm CDS       -
chr12:80328730-80328731(-) m6A 5'UTR       24284625//24981863//27773535//27371828//27773536
chr12:80328800-80328801(-) m6A 5'UTR//intron       24284625//24981863//27773535//27371828//27773536
chr12:80329163-80329164(-) m6A 5'UTR       25456834

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-30d-5p
Cytoplasm Breast adenocarcinoma cells (MCF-7)|Cervical adenocarcinoma cells (HeLa)     24918059
Exosome HCC tissues     30542726
Exosome Hepatocellular carcinoma cell line (HepG2)|Lung epithelial carcinoma cell line (A549)     20615901
Exosome Breast cancer cell line (MCF-7)     20976003
Exosome Renal cancer cells     21670082
Exosome Brain tissue     23382797
Exosome Plasma     23663360
Exosome Human mast cell line (HMC-1)     24009880
Exosome Cerebrospinal fluid     25420022
Exosome Blood|B lymphoblastoid cells|Breast milk|Chronic lymphocytic leukemia cells|Colon tissue|Endothelial cells|Epithelial cells|Kidney tissue|Lymphoma tissue|Mast cells|Seminal fluid|Tongue tissue     -
Extracellular vesicle HEK-293T cells     22849433
Microvesicle Hepatocellular carcinoma cell line (HepG2)|Lung epithelial carcinoma cell line (A549)     20615901
Microvesicle Plasma     23077538
Microvesicle Seminal plasma     23539611
Microvesicle Follicular fluid     23666971
Microvesicle Blood|Colon cancer cell line (LIM1863)|Fibroblasts|Mesenchymal stem cells|Urine     -
Mitochondrion Cell line (HEK-293|HeLa)     22984580
Nucleolus Breast adenocarcinoma cells (MCF-7)|Cervical adenocarcinoma cells (HeLa)     24918059
Nucleus Breast adenocarcinoma cells (MCF-7)|Cervical adenocarcinoma cells (HeLa)     24918059
PPP1R12A
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -
Exosome Blood     -
Membrane HCC cell line (HepG2)|K562 cells     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus Colon cancer cells     24393600
Nucleus HCC cell line (HepG2)|HeLa-S3 cells     -
Ribosome HEK-293 cells     22199352

Related Drug Information:


Resource Symbol Drug Name PubChem
ID
Function
ncDR hsa-miR-30d-5p
Midostaurin 9829523 Drug resistant
Herveline O 5459269 Drug sensitive
Cuspidatin C 5459164 Drug sensitive
2,7-Bis(methoxycarbonylmethyl)-10-methylphenothiazine 384444 Drug sensitive
2-Acetyl-1,2-dihydroellipticine 376328 Drug resistant
Antimycin A3 245869 Drug sensitive
5-Hydroxy-3-phenylpyrano[3,2-c]chromen-2(5H)-one 24205741 Drug sensitive
4,5-Bis(4-methoxyphenyl)-1,5-dihydroimidazol-2-one 231112 Drug sensitive
Kinetin riboside 20345 Drug resistant
Astrazon Orange R 135747272 Drug sensitive
Cladospirone bisepoxide 10316810 Drug sensitive
(3Z,4R)-4-Hydroxy-3-[2-[(1S,3R)-3-[2-[(1S,3S,3'R,4S)-1-hydroxy-4,6,6-trimethylspiro[2,5-dioxabicyclo[2.2.2]octane-3,6'-oxane]-3'-yl]ethyl]-2,2-dimethyl-6-methylidenecyclohexyl]ethylidene]oxolan-2-one 101206903 Drug sensitive
antineoplastic-d655481 - Drug resistant
4-[4-(3-Methoxy-phenyl)-piperazin-1 -yl]-5H-pyrrolo[3,2-d]pyrimidine - Drug sensitive
4-morpholinecarbodithioic acid, antimony complex - Drug sensitive
7-n,n-dimethylamino brefeldin a hydrochloride - Drug sensitive
E)-1-(4-(quinazolin-4-ylamino)phenyl)-3-(2,4,6-trimethoxyphenyl)prop-2-en-1-one - Drug sensitive
isatin dr - Drug sensitive
tetra(isobutenyl)antimony bromide - Drug sensitive
Resource Symbol Drug Name PubChem
ID
Function Link  
RNAInter hsa-miR-30d-5p
Gemcitabine 60750 Drug interaction    RC00001621
Sunitinib 5329102 Drug interaction    RC00001626
Eloxatine 5310940 Drug interaction    RC00001625
Trichostatin A 444732 Drug interaction    RC00001624
Paroxetine 43815 Drug interaction    RC00001620
Etoposide 36462 Drug interaction    RC00001619
5-Fluorouracil 3385 Drug interaction    RC00001617
Doxorubicin 31703 Drug interaction    RC00001618
cis-Diaminedichloroplatinum 2767 Drug interaction    RC00001616
Verapamil 2520 Drug interaction    RC00001615
N-(3-(5-Chloro-1H-pyrrolo[2,3-b]pyridine-3-carbonyl)-2,4-difluorophenyl)propane-1-sulfonamide 24180719 Drug interaction    RC00001627
Bicalutamide 2375 Drug interaction    RC00001614
Docetaxel 148124 Drug interaction    RC00001623
1,2,6-Tri-O-galloyl-beta-D-glucopyranose - Drug interaction    RC00001628
Trastuzumab - Drug interaction    RC00001629
Resource Symbol Drug Name PubChem ID PMID
NoncoRNA hsa-miR-30d-5p
N-(3-(5-Chloro-1H-pyrrolo[2,3-b]pyridine-3-carbonyl)-2,4-difluorophenyl)propane-1-sulfonamide 24180719       26456124

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-30d-5p
Interactor2: PPP1R12A

Evidence Support:


Strong-Evidence qRT-PCR
Weak-Evidence miRNA array
Prediction-Evidence miRanda//PicTar//RNAHybrid//Targetscan
Support Database VIRmiRNA

References:


PMID 23418453 Target region 3'UTR
Source VIRmiRNA Interactor1 expression None
Tissue or cell line Huh7.5 cells Interactor2 expression None
Description Seven miRNAs (miR-30b, miR-30c, miR-130a, miR-192, miR-301, miR-324-5p, and miR-565) were down-regulated in HCV-infected Huh7.5 cells (p<0.05) and subsequently up-regulated following interferon-alpha treatment (p<0.01). The miR-30(a-d) cluster and miR-130a/301 and their putative mRNA targets were predicted to be associated with cellular pathways that involve Hepatitis C virus entry, propagation and host response to viral infection.

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