Basic Information:

  VIRBase ID:  

HHID00011435

  Virus:  

Zaire ebolavirus (ZEBOV)

  Host:  

Homo sapiens

  Confidence Score:  

0.5711

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-130a-5p:  MIMAT0004593          IRF1-AS1:  NR_161242     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsa-miR-130a-5p	IRF1-AS1
miRBase Accession/Entrez ID	MIMAT0004593	441108
Organism	Homo sapiens	Homo sapiens
Category	miRNA	lncRNA
Alias	-	C5orf56

ncRNA SNP information:

Resource	Symbol	SNP ID	SNP Position	Ref/Alt
miRNASNP-v3	hsa-miR-130a-5p	rs746985078 chr11:57641223    A/G rs779670380 chr11:57641222    C/T rs758215186 chr11:57641219    T/G

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	IRF1-AS1	chr5:131768483(+) A-I      intronic chr5:131779242(+) A-I      intronic chr5:131757954(+) A-I      intronic chr5:131757961(+) A-I      intronic chr5:131758127(+) A-I      intronic chr5:131758086(+) A-I      intronic chr5:131779328(+) A-I      intronic chr5:131757647(+) A-I      intronic chr5:131751370(+) A-I      intronic chr5:131757677(+) A-I      intronic chr5:131757667(+) A-I      intronic chr5:131757569(+) A-I      intronic chr5:131758047(+) A-I      intronic chr5:131757703(+) A-I      intronic chr5:131758110(+) A-I      intronic chr5:131757709(+) A-I      intronic chr5:131757949(+) A-I      intronic chr5:131768404(+) A-I      intronic chr5:131776102(+) A-I      intronic chr5:131808401(+) A-I      intronic chr5:131808299(+) A-I      intronic chr5:131808305(+) A-I      intronic chr5:131757570(+) A-I      intronic chr5:131758104(+) A-I      intronic chr5:131758177(+) A-I      intronic chr5:131758130(+) A-I      intronic chr5:131758192(+) A-I      intronic chr5:131758034(+) A-I      intronic chr5:131758072(+) A-I      intronic chr5:131776089(+) A-I      intronic chr5:131808388(+) A-I      intronic chr5:131758056(+) A-I      intronic chr5:131808375(+) A-I      intronic

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsa-miR-130a-5p	Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     - Microvesicle Cell lines(GBM46|GBM8|HaCaT|K562|MCF-10A|MCF-7|MGG75)|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocytes     -
	IRF1-AS1	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)     - Exosome Blood     - Nucleus HeLa-S3 cells     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID	Function	Link
RNAInter	hsa-miR-130a-5p	Eloxatine 5310940 Drug interaction    RC00006934 5-Fluorouracil 3385 Drug interaction    RC00006933

Resource	Symbol	Drug Name	PubChem ID	PMID
NoncoRNA	hsa-miR-130a-5p	Tamoxifen 2733526       30840279

Interaction Network (The top 100 interactions):

Interactor1: hsa-miR-130a-5p
Interactor2: IRF1-AS1

Evidence Support:

Weak-Evidence	RNA-Seq
Prediction-Evidence	DIANA-microT
Support Database	ViRBase

References:

PMID	31570108	Target region	None
Source	ViRBase	Interactor1 expression	None
Tissue or cell line	ARPE-19 human RPE cells	Interactor2 expression	None
Description	Table 1 List of miRNAs that were differentially expressed between EBOV- and mock-infected human RPE cells at 24 h post-infection.Putative target genes in EBOV-infected human RPE cells were predicted from the 15 highly differentially expressed miRNAs using algorithms: 2629 targets by Diana microT; 1799 targets by miRDB; and 14315 targets by TargetScan (Additional file 5).