Basic Information:

  VIRBase ID:  

HHID00009750

  Virus:  

Zaire ebolavirus (ZEBOV)

  Host:  

Homo sapiens

  Confidence Score:  

0.5711

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-29b-1-5p:  MIMAT0004514          TET1:  NM_030625     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsa-miR-29b-1-5p	TET1
miRBase Accession/Entrez ID	MIMAT0004514	80312
Organism	Homo sapiens	Homo sapiens
Category	miRNA	mRNA
Alias	-	bA119F7.1//CXXC6//LCX

ncRNA SNP information:

Resource	Symbol	SNP ID	SNP Position	Ref/Alt
miRNASNP-v3	hsa-miR-29b-1-5p	rs1189550020 chr7:130877522    G/GA rs1554489373 chr7:130877519    T/C rs1554489375 chr7:130877520    A/C rs782109811 chr7:130877509    TA/T rs778204762 chr7:130877526    C/A rs778204762 chr7:130877526    C/T

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	TET1	chr10:70405782(+) A-I      NonSyn:Lys->Arg chr10:70404017(+) A-I      intronic chr10:70393787(+) A-I      intronic chr10:70370927(+) A-I      intronic chr10:70372487(+) A-I      intronic chr10:70353449(+) A-I      intronic chr10:70349963(+) A-I      intronic chr10:70370921(+) A-I      intronic chr10:70370909(+) A-I      intronic chr10:70392788(+) A-I      intronic chr10:70370907(+) A-I      intronic chr10:70370905(+) A-I      intronic chr10:70392826(+) A-I      intronic chr10:70392830(+) A-I      intronic chr10:70392833(+) A-I      intronic chr10:70349506(+) A-I      intronic chr10:70345143(+) A-I      intronic chr10:70343575(+) A-I      intronic chr10:70339786(+) A-I      intronic chr10:70339755(+) A-I      intronic chr10:70370954(+) A-I      intronic chr10:70398928(+) A-I      intronic chr10:70398992(+) A-I      intronic chr10:70399000(+) A-I      intronic chr10:70402939(+) A-I      intronic chr10:70402954(+) A-I      intronic chr10:70402958(+) A-I      intronic chr10:70402976(+) A-I      intronic chr10:70370958(+) A-I      intronic chr10:70392787(+) A-I      intronic chr10:70402130(+) A-I      intronic chr10:70440227(+) A-I      intronic chr10:70386437(+) A-I      intronic chr10:70440368(+) A-I      intronic chr10:70395558(+) A-I      intronic chr10:70349270(+) A-I      intronic chr10:70416840(+) A-I      intronic chr10:70344739(+) A-I      intronic chr10:70393893(+) A-I      intronic chr10:70365431(+) A-I      intronic chr10:70365372(+) A-I      intronic chr10:70365169(+) A-I      intronic chr10:70365093(+) A-I      intronic chr10:70365005(+) A-I      intronic chr10:70364991(+) A-I      intronic chr10:70440325(+) A-I      intronic chr10:70364975(+) A-I      intronic chr10:70364974(+) A-I      intronic chr10:70358046(+) A-I      intronic chr10:70429653(+) A-I      intronic chr10:70358037(+) A-I      intronic chr10:70422539(+) A-I      intronic chr10:70422533(+) A-I      intronic chr10:70422530(+) A-I      intronic chr10:70358028(+) A-I      intronic chr10:70358027(+) A-I      intronic chr10:70422529(+) A-I      intronic chr10:70356871(+) A-I      intronic chr10:70421832(+) A-I      intronic chr10:70421821(+) A-I      intronic chr10:70356846(+) A-I      intronic chr10:70351410(+) A-I      intronic chr10:70341357(+) A-I      intronic chr10:70344346(+) A-I      intronic chr10:70421812(+) A-I      intronic chr10:70328533(+) A-I      intronic chr10:70419187(+) A-I      intronic chr10:70325024(+) A-I      intronic chr10:70418125(+) A-I      intronic chr10:70418068(+) A-I      intronic chr10:70416668(+) A-I      intronic chr10:70416218(+) A-I      intronic chr10:70369783(+) A-I      intronic chr10:70416084(+) A-I      intronic chr10:70398969(+) A-I      intronic chr10:70393880(+) A-I      intronic chr10:70416599(+) A-I      intronic chr10:70365846(+) A-I      intronic chr10:70393815(+) A-I      intronic chr10:70393799(+) A-I      intronic chr10:70393775(+) A-I      intronic chr10:70393771(+) A-I      intronic chr10:70390233(+) A-I      intronic chr10:70390213(+) A-I      intronic chr10:70372217(+) A-I      intronic chr10:70390169(+) A-I      intronic chr10:70390168(+) A-I      intronic chr10:70387888(+) A-I      intronic chr10:70385582(+) A-I      intronic chr10:70385573(+) A-I      intronic chr10:70382139(+) A-I      intronic chr10:70382123(+) A-I      intronic chr10:70379873(+) A-I      intronic chr10:70379864(+) A-I      intronic chr10:70379859(+) A-I      intronic chr10:70379790(+) A-I      intronic chr10:70379789(+) A-I      intronic chr10:70379011(+) A-I      intronic chr10:70372584(+) A-I      intronic chr10:70372575(+) A-I      intronic chr10:70372475(+) A-I      intronic chr10:70370928(+) A-I      intronic chr10:70393814(+) A-I      intronic chr10:70370618(+) A-I      intronic chr10:70370552(+) A-I      intronic chr10:70367270(+) A-I      intronic chr10:70370539(+) A-I      intronic chr10:70370064(+) A-I      intronic chr10:70368478(+) A-I      intronic chr10:70368476(+) A-I      intronic chr10:70340460(+) A-I      intronic chr10:70368132(+) A-I      intronic chr10:70399001(+) A-I      intronic chr10:70368110(+) A-I      intronic chr10:70365904(+) A-I      intronic chr10:70365494(+) A-I      intronic chr10:70402765(+) A-I      intronic chr10:70368834(+) A-I      intronic chr10:70339868(+) A-I      intronic chr10:70381220(+) A-I      intronic chr10:70387978(+) A-I      intronic chr10:70386819(+) A-I      intronic chr10:70392821(+) A-I      intronic chr10:70390205(+) A-I      intronic chr10:70380983(+) A-I      intronic chr10:70365751(+) A-I      intronic chr10:70448377(+) A-I      intronic chr10:70345899(+) A-I      intronic chr10:70385572(+) A-I      intronic chr10:70348800(+) A-I      intronic chr10:70433918(+) A-I      intronic chr10:70412549(+) A-I      intronic chr10:70348733(+) A-I      intronic chr10:70390752(+) A-I      intronic chr10:70417269(+) A-I      intronic chr10:70435730(+) A-I      intronic chr10:70367329(+) A-I      intronic chr10:70416636(+) A-I      intronic chr10:70371361(+) A-I      intronic chr10:70393872(+) A-I      intronic chr10:70393218(+) A-I      intronic chr10:70385734(+) A-I      intronic chr10:70372407(+) A-I      intronic chr10:70392794(+) A-I      intronic chr10:70389478(+) A-I      intronic chr10:70421390(+) A-I      intronic chr10:70438929(+) A-I      intronic chr10:70386783(+) A-I      intronic chr10:70417109(+) A-I      intronic chr10:70368683(+) A-I      intronic chr10:70371310(+) A-I      intronic chr10:70447813(+) A-I      intronic chr10:70396922(+) A-I      intronic chr10:70363453(+) A-I      intronic chr10:70397676(+) A-I      intronic chr10:70336573(+) A-I      intronic chr10:70385787(+) A-I      intronic chr10:70437386(+) A-I      intronic chr10:70410267(+) A-I      intronic chr10:70365719(+) A-I      intronic chr10:70433921(+) A-I      intronic chr10:70358718(+) A-I      intronic chr10:70365371(+) A-I      intronic chr10:70433935(+) A-I      intronic chr10:70416201(+) A-I      intronic chr10:70449347(+) A-I      intronic chr10:70418062(+) A-I      intronic chr10:70379830(+) A-I      intronic chr10:70402398(+) A-I      intronic chr10:70370245(+) A-I      intronic chr10:70379840(+) A-I      intronic chr10:70370298(+) A-I      intronic chr10:70390908(+) A-I      intronic chr10:70390724(+) A-I      intronic chr10:70407281(+) A-I      intronic chr10:70365048(+) A-I      intronic chr10:70370796(+) A-I      intronic chr10:70438661(+) A-I      intronic chr10:70440340(+) A-I      intronic chr10:70365507(+) A-I      intronic chr10:70390201(+) A-I      intronic chr10:70440117(+) A-I      intronic chr10:70385791(+) A-I      intronic chr10:70373444(+) A-I      intronic chr10:70438368(+) A-I      intronic chr10:70352824(+) A-I      intronic chr10:70365015(+) A-I      intronic chr10:70370634(+) A-I      intronic chr10:70324045(+) A-I      intronic chr10:70387546(+) A-I      intronic chr10:70355936(+) A-I      intronic chr10:70388883(+) A-I      intronic chr10:70371135(+) A-I      intronic chr10:70440379(+) A-I      intronic chr10:70433799(+) A-I      intronic chr10:70366003(+) A-I      intronic chr10:70416584(+) A-I      intronic chr10:70432177(+) A-I      intronic chr10:70370201(+) A-I      intronic chr10:70397711(+) A-I      intronic chr10:70386774(+) A-I      intronic chr10:70393877(+) A-I      intronic chr10:70390823(+) A-I      intronic chr10:70391849(+) A-I      intronic chr10:70370665(+) A-I      intronic chr10:70390861(+) A-I      intronic chr10:70349296(+) A-I      intronic chr10:70407196(+) A-I      intronic chr10:70410277(+) A-I      intronic chr10:70422623(+) A-I      intronic chr10:70379210(+) A-I      intronic chr10:70331763(+) A-I      intronic chr10:70337389(+) A-I      intronic chr10:70395528(+) A-I      intronic chr10:70428691(+) A-I      intronic chr10:70399059(+) A-I      intronic chr10:70389034(+) A-I      intronic chr10:70435752(+) A-I      intronic chr10:70368722(+) A-I      intronic chr10:70402636(+) A-I      intronic chr10:70402768(+) A-I      intronic chr10:70402002(+) A-I      intronic chr10:70365087(+) A-I      intronic chr10:70416618(+) A-I      intronic chr10:70342114(+) A-I      intronic chr10:70422477(+) A-I      intronic chr10:70324992(+) A-I      intronic chr10:70408605(+) A-I      intronic chr10:70358712(+) A-I      intronic chr10:70365492(+) A-I      intronic chr10:70386514(+) A-I      intronic chr10:70379853(+) A-I      intronic chr10:70397464(+) A-I      intronic chr10:70440339(+) A-I      intronic chr10:70389028(+) A-I      intronic chr10:70410241(+) A-I      intronic chr10:70435742(+) A-I      intronic chr10:70367750(+) A-I      intronic chr10:70438814(+) A-I      intronic chr10:70365938(+) A-I      intronic chr10:70397363(+) A-I      intronic chr10:70398993(+) A-I      intronic chr10:70385706(+) A-I      intronic chr10:70402965(+) A-I      intronic chr10:70412539(+) A-I      intronic chr10:70438360(+) A-I      intronic chr10:70416621(+) A-I      intronic chr10:70386388(+) A-I      intronic chr10:70379224(+) A-I      intronic chr10:70373529(+) A-I      intronic chr10:70336591(+) A-I      intronic chr10:70379087(+) A-I      intronic chr10:70426612(+) A-I      intronic chr10:70373564(+) A-I      intronic chr10:70365568(+) A-I      intronic chr10:70450096(+) A-I      intronic chr10:70402938(+) A-I      intronic chr10:70395475(+) A-I      intronic chr10:70403527(+) A-I      intronic chr10:70438387(+) A-I      intronic chr10:70373503(+) A-I      intronic chr10:70379113(+) A-I      intronic chr10:70428620(+) A-I      intronic chr10:70402630(+) A-I      intronic chr10:70418116(+) A-I      intronic chr10:70450110(+) A-I      intronic chr10:70399735(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TET1	chr10:70331979-70331980(+) m6A 5'UTR       22608085 chr10:70332033-70332034(+) m6A 5'UTR       24981863//22608085 chr10:70332045-70332046(+) m6A 5'UTR       24981863//22608085 chr10:70332150-70332151(+) m6A CDS       24981863//22608085 chr10:70332165-70332166(+) m6A CDS       24981863//22608085 chr10:70332182-70332183(+) m6A CDS       24981863//22608085 chr10:70332221-70332222(+) m6A CDS       24981863//22608085 chr10:70332278-70332279(+) m6A CDS       24981863//22608085 chr10:70332283-70332284(+) m6A CDS       24981863//22608085 chr10:70332289-70332290(+) m6A CDS       24981863//22608085 chr10:70332353-70332354(+) m6A CDS       22608085 chr10:70332372-70332373(+) m6A CDS       22608085 chr10:70332579-70332580(+) m6A CDS       24981863//22608085 chr10:70332605-70332606(+) m6A CDS       24981863//22608085 chr10:70332656-70332657(+) m6A CDS       25456834//24981863//22608085 chr10:70332755-70332756(+) m6A CDS       25456834//24981863//22608085 chr10:70332772-70332773(+) m6A CDS       25456834//24981863//22608085 chr10:70332788-70332789(+) m6A CDS       25456834//24981863//22608085 chr10:70332831-70332832(+) m6A CDS       25456834//24981863//22608085 chr10:70332888-70332889(+) m6A CDS       25456834//24981863//22608085 chr10:70332973-70332974(+) m6A CDS       24981863//22608085 chr10:70333023-70333024(+) m6A CDS       24981863//22608085 chr10:70333032-70333033(+) m6A CDS       24981863//22608085 chr10:70333099-70333100(+) m6A CDS       24981863//22608085 chr10:70333120-70333121(+) m6A CDS       24981863//22608085 chr10:70333192-70333193(+) m6A CDS       24981863//22608085 chr10:70333225-70333226(+) m6A CDS       22608085 chr10:70333268-70333269(+) m6A CDS       22608085 chr10:70333335-70333336(+) m6A CDS       24981863//22608085 chr10:70333346-70333347(+) m6A CDS       24981863//22608085 chr10:70333377-70333378(+) m6A CDS       24981863//22608085 chr10:70333471-70333472(+) m6A CDS       24981863//22608085 chr10:70333516-70333517(+) m6A CDS       24981863//22608085 chr10:70333539-70333540(+) m6A CDS       24981863//22608085 chr10:70333660-70333661(+) m6A CDS       22608085 chr10:70333719-70333720(+) m6A CDS       22608085 chr10:70333879-70333880(+) m6A CDS       24981863//22608085 chr10:70333895-70333896(+) m6A CDS       24981863//22608085 chr10:70333926-70333927(+) m6A CDS       24981863//22608085 chr10:70333935-70333936(+) m6A CDS       24981863//22608085 chr10:70333984-70333985(+) m6A CDS       24981863//22608085 chr10:70360750-70360751(+) m6A CDS       24981863//22608085 chr10:70404471-70404472(+) m6A CDS       24981863//22608085 chr10:70404503-70404504(+) m6A CDS       24981863//22608085 chr10:70404531-70404532(+) m6A CDS       24981863//22608085 chr10:70404548-70404549(+) m6A CDS       24981863//22608085 chr10:70404584-70404585(+) m6A CDS       24981863//22608085 chr10:70404616-70404617(+) m6A CDS       25456834//24981863//22608085 chr10:70404623-70404624(+) m6A CDS       25456834//24981863//22608085 chr10:70404698-70404699(+) m6A CDS       25456834//24981863//22608085 chr10:70404721-70404722(+) m6A CDS       25456834//24981863//22608085 chr10:70404748-70404749(+) m6A CDS       24981863//22608085 chr10:70404768-70404769(+) m6A CDS       24981863//22608085 chr10:70404793-70404794(+) m6A CDS       24981863//22608085 chr10:70404838-70404839(+) m6A CDS       24981863//22608085 chr10:70404848-70404849(+) m6A CDS       24981863//22608085 chr10:70404872-70404873(+) m6A CDS       24981863//22608085 chr10:70404881-70404882(+) m6A CDS       24981863//22608085 chr10:70405057-70405058(+) m6A CDS       24981863//22608085 chr10:70405083-70405084(+) m6A CDS       24981863//22608085 chr10:70405252-70405253(+) m6A CDS       24981863//22608085 chr10:70405304-70405305(+) m6A CDS       24981863//22608085 chr10:70405313-70405314(+) m6A CDS       24981863//22608085 chr10:70405319-70405320(+) m6A CDS       24981863//22608085 chr10:70405341-70405342(+) m6A CDS       24981863//22608085 chr10:70405368-70405369(+) m6A CDS       24981863//22608085 chr10:70405405-70405406(+) m6A CDS       24981863//22608085 chr10:70405643-70405644(+) m6A CDS       24981863//22608085 chr10:70405661-70405662(+) m6A CDS       24981863//22608085 chr10:70405767-70405768(+) m6A CDS       24981863//22608085 chr10:70405775-70405776(+) m6A CDS       24981863//22608085 chr10:70405863-70405864(+) m6A CDS       24981863//22608085 chr10:70405908-70405909(+) m6A CDS       24981863//22608085 chr10:70405916-70405917(+) m6A CDS       24981863//22608085 chr10:70405933-70405934(+) m6A CDS       24981863//22608085 chr10:70406148-70406149(+) m6A CDS       22608085 chr10:70406185-70406186(+) m6A CDS       22608085 chr10:70406259-70406260(+) m6A CDS       24981863//22608085 chr10:70406484-70406485(+) m6A CDS       24981863//22608085 chr10:70406515-70406516(+) m6A CDS       24981863//22608085 chr10:70406629-70406630(+) m6A CDS       24981863//22608085 chr10:70406651-70406652(+) m6A CDS       24981863//22608085 chr10:70406687-70406688(+) m6A CDS       24981863//22608085 chr10:70406711-70406712(+) m6A CDS       24981863//22608085 chr10:70406739-70406740(+) m6A CDS       24981863//22608085 chr10:70411620-70411621(+) m6A CDS       24981863//22608085 chr10:70411654-70411655(+) m6A CDS       24981863//22608085 chr10:70446431-70446432(+) m6A CDS       24981863//22608085 chr10:70450578-70450579(+) m6A CDS       24981863//22608085 chr10:70450605-70450606(+) m6A CDS       24981863//22608085 chr10:70450610-70450611(+) m6A CDS       24981863//22608085 chr10:70450636-70450637(+) m6A CDS       24981863//22608085 chr10:70450647-70450648(+) m6A CDS       24981863//22608085 chr10:70450719-70450720(+) m6A CDS       25456834//24981863//22608085 chr10:70450820-70450821(+) m6A CDS       25456834//24981863//22608085 chr10:70450978-70450979(+) m6A CDS       24209618//25456834//24981863//22608085 chr10:70451011-70451012(+) m6A CDS       24209618//25456834//24981863//22608085 chr10:70451078-70451079(+) m6A CDS       24209618//25456834//24981863//22608085 chr10:70451146-70451147(+) m6A CDS       24209618//25456834//24981863//22608085 chr10:70451317-70451318(+) m6A CDS       25456834//24981863//22608085 chr10:70451345-70451346(+) m6A CDS       25456834//24981863//22608085 chr10:70451350-70451351(+) m6A CDS       25456834//24981863//22608085 chr10:70451413-70451414(+) m6A CDS       24209618//25456834//24981863//22608085 chr10:70451438-70451439(+) m6A CDS       24209618//25456834//24981863//22608085 chr10:70451464-70451465(+) m6A CDS       24209618//25456834//24981863//22608085 chr10:70452654-70452655(+) m6A 3'UTR       24981863 chr10:70452663-70452664(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsa-miR-29b-1-5p	Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     - Microvesicle Seminal plasma     23539611 Microvesicle Fibroblasts|Mesenchymal stem cells     - Mitochondrion Skeletal muscle myoblasts     21637849
	TET1	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     - Membrane HCC cell line (HepG2)|K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsa-miR-29b-1-5p
Interactor2: TET1

Evidence Support:

Weak-Evidence	RNA-Seq
Prediction-Evidence	miRecords
Support Database	ViRBase

References:

PMID	31570108	Target region	None
Source	ViRBase	Interactor1 expression	None
Tissue or cell line	ARPE-19 human RPE cells	Interactor2 expression	None
Description	Table 1 List of miRNAs that were differentially expressed between EBOV- and mock-infected human RPE cells at 24 h post-infection.Additional file 6. List of validated miRNA targets from miRecords and miRTarBase databases.