Detail Information

Basic Information:


  VIRBase ID:  

HHID00008887

  Virus:  

Zaire ebolavirus (ZEBOV)

  Host:  

Homo sapiens

  Confidence Score:  

0.5711

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-100-3p:           NUP43:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-100-3p NUP43
miRBase
Accession/Entrez ID
MIMAT0004512 348995
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - bA350J20.1//p42

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-100-3p
rs1388368183 chr11:122152253    A/G
rs530428149 chr11:122152245    C/T
rs749039221 chr11:122152247    A/G
rs775253529 chr11:122152245    CTA/C
rs909526986 chr11:122152248    T/C
rs1321972926 chr11:122152258    C/T
rs770590792 chr11:122152255    A/G
rs773933142 chr11:122152260    T/C
rs773933142 chr11:122152260    T/G

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR NUP43
chr6:150050330(-) A-I      intronic
chr6:150050341(-) A-I      intronic
chr6:150051222(-) A-I      intronic
chr6:150051238(-) A-I      intronic
chr6:150051267(-) A-I      intronic
chr6:150051320(-) A-I      intronic
chr6:150051322(-) A-I      intronic
chr6:150051235(-) A-I      intronic
chr6:150050303(-) A-I      intronic
chr6:150050320(-) A-I      intronic
chr6:150054832(-) A-I      intronic
chr6:150068499(-) A-I      intronic
chr6:150065312(-) A-I      intronic
chr6:150061713(-) A-I      intronic
chr6:150060596(-) A-I      intronic
chr6:150060587(-) A-I      intronic
chr6:150059004(-) A-I      intronic
chr6:150052478(-) A-I      intronic
chr6:150058997(-) A-I      intronic
chr6:150058983(-) A-I      intronic
chr6:150058967(-) A-I      intronic
chr6:150056476(-) A-I      intronic
chr6:150056310(-) A-I      intronic
chr6:150056246(-) A-I      intronic
chr6:150055908(-) A-I      intronic
chr6:150055822(-) A-I      intronic
chr6:150055815(-) A-I      intronic
chr6:150055810(-) A-I      intronic
chr6:150055731(-) A-I      intronic
chr6:150055527(-) A-I      intronic
chr6:150052491(-) A-I      intronic
chr6:150054755(-) A-I      intronic
chr6:150055178(-) A-I      intronic
chr6:150055138(-) A-I      intronic
chr6:150055133(-) A-I      intronic
chr6:150055125(-) A-I      intronic
chr6:150055109(-) A-I      intronic
chr6:150053193(-) A-I      intronic
chr6:150055107(-) A-I      intronic
chr6:150055063(-) A-I      intronic
chr6:150055050(-) A-I      intronic
chr6:150050224(-) A-I      intronic
chr6:150050285(-) A-I      intronic
chr6:150051148(-) A-I      intronic
chr6:150054795(-) A-I      intronic
chr6:150051251(-) A-I      intronic
chr6:150051315(-) A-I      intronic
chr6:150051318(-) A-I      intronic
chr6:150051339(-) A-I      intronic
chr6:150051352(-) A-I      intronic
chr6:150051358(-) A-I      intronic
chr6:150051862(-) A-I      intronic
chr6:150052030(-) A-I      intronic
chr6:150052048(-) A-I      intronic
chr6:150052169(-) A-I      intronic
chr6:150053974(-) A-I      intronic
chr6:150053943(-) A-I      intronic
chr6:150054770(-) A-I      intronic
chr6:150054758(-) A-I      intronic
chr6:150052187(-) A-I      intronic
chr6:150054666(-) A-I      intronic
chr6:150052199(-) A-I      intronic
chr6:150054162(-) A-I      intronic
chr6:150052504(-) A-I      intronic
chr6:150052516(-) A-I      intronic
chr6:150050286(-) A-I      intronic
chr6:150053752(-) A-I      intronic
chr6:150053731(-) A-I      intronic
chr6:150053725(-) A-I      intronic
chr6:150053465(-) A-I      intronic
chr6:150053210(-) A-I      intronic
chr6:150053206(-) A-I      intronic
chr6:150052533(-) A-I      intronic
chr6:150053939(-) A-I      intronic
chr6:150053935(-) A-I      intronic
chr6:150053929(-) A-I      intronic
chr6:150053900(-) A-I      intronic
chr6:150052665(-) A-I      intronic
chr6:150053896(-) A-I      intronic
chr6:150053874(-) A-I      intronic
chr6:150053870(-) A-I      intronic
chr6:150053834(-) A-I      intronic
chr6:150053811(-) A-I      intronic
chr6:150052685(-) A-I      intronic
chr6:150066476(-) A-I      intronic
chr6:150050300(-) A-I      intronic
chr6:150052258(-) A-I      intronic
chr6:150046732(-) A-I      3'UTR
chr6:150045889(-) A-I      3'UTR
chr6:150045864(-) A-I      3'UTR
chr6:150045809(-) A-I      3'UTR
chr6:150045894(-) A-I      3'UTR
chr6:150046742(-) A-I      3'UTR
chr6:150046663(-) A-I      3'UTR
chr6:150047496(-) A-I      3'UTR
chr6:150045730(-) A-I      3'UTR
chr6:150045903(-) A-I      3'UTR
chr6:150045742(-) A-I      3'UTR
chr6:150046034(-) A-I      3'UTR
chr6:150045735(-) A-I      3'UTR
chr6:150045772(-) A-I      3'UTR
chr6:150045803(-) A-I      3'UTR
chr6:150045904(-) A-I      3'UTR
chr6:150046738(-) A-I      3'UTR
chr6:150047456(-) A-I      3'UTR
chr6:150045757(-) A-I      3'UTR
chr6:150045758(-) A-I      3'UTR
chr6:150045767(-) A-I      3'UTR
chr6:150045777(-) A-I      3'UTR
chr6:150047350(-) A-I      3'UTR
chr6:150047318(-) A-I      3'UTR
chr6:150046692(-) A-I      3'UTR
chr6:150045831(-) A-I      3'UTR
chr6:150045888(-) A-I      3'UTR
chr6:150045938(-) A-I      3'UTR
chr6:150046508(-) A-I      3'UTR
chr6:150045975(-) A-I      3'UTR
chr6:150045893(-) A-I      3'UTR
chr6:150047531(-) A-I      3'UTR
chr6:150046625(-) A-I      3'UTR
chr6:150046606(-) A-I      3'UTR
chr6:150046593(-) A-I      3'UTR
chr6:150046585(-) A-I      3'UTR
chr6:150046568(-) A-I      3'UTR
chr6:150046745(-) A-I      3'UTR
chr6:150046533(-) A-I      3'UTR
chr6:150045792(-) A-I      3'UTR
chr6:150046403(-) A-I      3'UTR
chr6:150046372(-) A-I      3'UTR
chr6:150046668(-) A-I      3'UTR
chr6:150045962(-) A-I      3'UTR
chr6:150052444(-) A-I      intronic
chr6:150051819(-) A-I      intronic
chr6:150052590(-) A-I      intronic
chr6:150051257(-) A-I      intronic
chr6:150055790(-) A-I      intronic
chr6:150055206(-) A-I      intronic
chr6:150055536(-) A-I      intronic
chr6:150054775(-) A-I      intronic
chr6:150055834(-) A-I      intronic
chr6:150054168(-) A-I      intronic
chr6:150051418(-) A-I      intronic
chr6:150052186(-) A-I      intronic
chr6:150055341(-) A-I      intronic
chr6:150054613(-) A-I      intronic
chr6:150051261(-) A-I      intronic
chr6:150051395(-) A-I      intronic
chr6:150050306(-) A-I      intronic
chr6:150058994(-) A-I      intronic
chr6:150051349(-) A-I      intronic
chr6:150052014(-) A-I      intronic
chr6:150056993(-) A-I      intronic
chr6:150055851(-) A-I      intronic
chr6:150052060(-) A-I      intronic
chr6:150055462(-) A-I      intronic
chr6:150054750(-) A-I      intronic
chr6:150052479(-) A-I      intronic
chr6:150056323(-) A-I      intronic
chr6:150061665(-) A-I      intronic
chr6:150055717(-) A-I      intronic
chr6:150052451(-) A-I      intronic
chr6:150055485(-) A-I      intronic
chr6:150056728(-) A-I      intronic
chr6:150058237(-) A-I      intronic
chr6:150060439(-) A-I      intronic
chr6:150056282(-) A-I      intronic
chr6:150052577(-) A-I      intronic
chr6:150050346(-) A-I      intronic
chr6:150063434(-) A-I      intronic
chr6:150058877(-) A-I      intronic
chr6:150054849(-) A-I      intronic
chr6:150054738(-) A-I      intronic
chr6:150052146(-) A-I      intronic
chr6:150051966(-) A-I      intronic
chr6:150060458(-) A-I      intronic
chr6:150052349(-) A-I      intronic
chr6:150051150(-) A-I      intronic
chr6:150054761(-) A-I      intronic
chr6:150056428(-) A-I      intronic
chr6:150052354(-) A-I      intronic
chr6:150062875(-) A-I      intronic
chr6:150051807(-) A-I      intronic
chr6:150054679(-) A-I      intronic
chr6:150054776(-) A-I      intronic
chr6:150051213(-) A-I      intronic
chr6:150055453(-) A-I      intronic
chr6:150055028(-) A-I      intronic
chr6:150058612(-) A-I      intronic
chr6:150060519(-) A-I      intronic
chr6:150052655(-) A-I      intronic
chr6:150051274(-) A-I      intronic
chr6:150050400(-) A-I      intronic
chr6:150054854(-) A-I      intronic
chr6:150055099(-) A-I      intronic
chr6:150051894(-) A-I      intronic
chr6:150054164(-) A-I      intronic
chr6:150046603(-) A-I      3'UTR
chr6:150045900(-) A-I      3'UTR
chr6:150046389(-) A-I      3'UTR
chr6:150046412(-) A-I      3'UTR
chr6:150045884(-) A-I      3'UTR
chr6:150045895(-) A-I      3'UTR
chr6:150045949(-) A-I      3'UTR
chr6:150045943(-) A-I      3'UTR
chr6:150046351(-) A-I      3'UTR
chr6:150045907(-) A-I      3'UTR
chr6:150045805(-) A-I      3'UTR
chr6:150045957(-) A-I      3'UTR
chr6:150046435(-) A-I      3'UTR
chr6:150046687(-) A-I      3'UTR
chr6:150045835(-) A-I      3'UTR
chr6:150046484(-) A-I      3'UTR
chr6:150047376(-) A-I      3'UTR
chr6:150045857(-) A-I      3'UTR
chr6:150045828(-) A-I      3'UTR
chr6:150046662(-) A-I      3'UTR
chr6:150045818(-) A-I      3'UTR
chr6:150045734(-) A-I      3'UTR
chr6:150046423(-) A-I      3'UTR
chr6:150045901(-) A-I      3'UTR
chr6:150045918(-) A-I      3'UTR
chr6:150046471(-) A-I      3'UTR
chr6:150046340(-) A-I      3'UTR
chr6:150045749(-) A-I      3'UTR
chr6:150045997(-) A-I      3'UTR
chr6:150046642(-) A-I      3'UTR
chr6:150045928(-) A-I      3'UTR
chr6:150045736(-) A-I      3'UTR
chr6:150046673(-) A-I      3'UTR
chr6:150045755(-) A-I      3'UTR
chr6:150045998(-) A-I      3'UTR
chr6:150047460(-) A-I      3'UTR
chr6:150046681(-) A-I      3'UTR
chr6:150046581(-) A-I      3'UTR
chr6:150047308(-) A-I      3'UTR
chr6:150047423(-) A-I      3'UTR
chr6:150046613(-) A-I      3'UTR
chr6:150045825(-) A-I      3'UTR
chr6:150046688(-) A-I      3'UTR
chr6:150046562(-) A-I      3'UTR
chr6:150045920(-) A-I      3'UTR
chr6:150045951(-) A-I      3'UTR
chr6:150045860(-) A-I      3'UTR
chr6:150045841(-) A-I      3'UTR
chr6:150045747(-) A-I      3'UTR
chr6:150046485(-) A-I      3'UTR
chr6:150045788(-) A-I      3'UTR
chr6:150047420(-) A-I      3'UTR
chr6:150046486(-) A-I      3'UTR
chr6:150045787(-) A-I      3'UTR
chr6:150046649(-) A-I      3'UTR
chr6:150047455(-) A-I      3'UTR
chr6:150047430(-) A-I      3'UTR
chr6:150045817(-) A-I      3'UTR
chr6:150046545(-) A-I      3'UTR
chr6:150045848(-) A-I      3'UTR
chr6:150047300(-) A-I      3'UTR
chr6:150046495(-) A-I      3'UTR
chr6:150047459(-) A-I      3'UTR
chr6:150045868(-) A-I      3'UTR
chr6:150045750(-) A-I      3'UTR
chr6:150045796(-) A-I      3'UTR
chr6:150047384(-) A-I      3'UTR
chr6:150047370(-) A-I      3'UTR
chr6:150046415(-) A-I      3'UTR
chr6:150045965(-) A-I      3'UTR
chr6:150046432(-) A-I      3'UTR
chr6:150045929(-) A-I      3'UTR
chr6:150045926(-) A-I      3'UTR
chr6:150045852(-) A-I      3'UTR
chr6:150051283(-) A-I      intronic
chr6:150060499(-) A-I      intronic
chr6:150052642(-) A-I      intronic
chr6:150055524(-) A-I      intronic
chr6:150050347(-) A-I      intronic
chr6:150061252(-) A-I      intronic
chr6:150056291(-) A-I      intronic
chr6:150051850(-) A-I      intronic
chr6:150052647(-) A-I      intronic
chr6:150051849(-) A-I      intronic
chr6:150053860(-) A-I      intronic
chr6:150064217(-) A-I      intronic
chr6:150051864(-) A-I      intronic
chr6:150052583(-) A-I      intronic
chr6:150060695(-) A-I      intronic
chr6:150051845(-) A-I      intronic
chr6:150053425(-) A-I      intronic
chr6:150058824(-) A-I      intronic
chr6:150054665(-) A-I      intronic
chr6:150053600(-) A-I      intronic
chr6:150063301(-) A-I      intronic
chr6:150055493(-) A-I      intronic
chr6:150051206(-) A-I      intronic
chr6:150050302(-) A-I      intronic
chr6:150057291(-) A-I      intronic
chr6:150051160(-) A-I      intronic
chr6:150058859(-) A-I      intronic
chr6:150051957(-) A-I      intronic
chr6:150051952(-) A-I      intronic
chr6:150055890(-) A-I      intronic
chr6:150059000(-) A-I      intronic
chr6:150053670(-) A-I      intronic
chr6:150058338(-) A-I      intronic
chr6:150061573(-) A-I      intronic
chr6:150058825(-) A-I      intronic
chr6:150053899(-) A-I      intronic
chr6:150052461(-) A-I      intronic
chr6:150055541(-) A-I      intronic
chr6:150054706(-) A-I      intronic
chr6:150051396(-) A-I      intronic
chr6:150060696(-) A-I      intronic
chr6:150053218(-) A-I      intronic
chr6:150054873(-) A-I      intronic
chr6:150051218(-) A-I      intronic
chr6:150054627(-) A-I      intronic
chr6:150051231(-) A-I      intronic
chr6:150060293(-) A-I      intronic
chr6:150062447(-) A-I      intronic
chr6:150054759(-) A-I      intronic
chr6:150054868(-) A-I      intronic
chr6:150054710(-) A-I      intronic
chr6:150058996(-) A-I      intronic
chr6:150053918(-) A-I      intronic
chr6:150053091(-) A-I      intronic
chr6:150053152(-) A-I      intronic
chr6:150056679(-) A-I      intronic
chr6:150052587(-) A-I      intronic
chr6:150054760(-) A-I      intronic
chr6:150053737(-) A-I      intronic
chr6:150068650(-) A-I      intronic
chr6:150054846(-) A-I      intronic
chr6:150056287(-) A-I      intronic
chr6:150051846(-) A-I      intronic
chr6:150056703(-) A-I      intronic
chr6:150050321(-) A-I      intronic
chr6:150051342(-) A-I      intronic
chr6:150053235(-) A-I      intronic
chr6:150051338(-) A-I      intronic
chr6:150051173(-) A-I      intronic
chr6:150058951(-) A-I      intronic
chr6:150055519(-) A-I      intronic
chr6:150050195(-) A-I      intronic
chr6:150055359(-) A-I      intronic
chr6:150055389(-) A-I      intronic
chr6:150057049(-) A-I      intronic
chr6:150061593(-) A-I      intronic
chr6:150052265(-) A-I      intronic
chr6:150053150(-) A-I      intronic
chr6:150058406(-) A-I      intronic
chr6:150054693(-) A-I      intronic
chr6:150051270(-) A-I      intronic
chr6:150052212(-) A-I      intronic
chr6:150062807(-) A-I      intronic
chr6:150051284(-) A-I      intronic
chr6:150054827(-) A-I      intronic
chr6:150050194(-) A-I      intronic
chr6:150052022(-) A-I      intronic
chr6:150062569(-) A-I      intronic
chr6:150053728(-) A-I      intronic
chr6:150055233(-) A-I      intronic
chr6:150053824(-) A-I      intronic
chr6:150054726(-) A-I      intronic
chr6:150053583(-) A-I      intronic
chr6:150054800(-) A-I      intronic
chr6:150053422(-) A-I      intronic
chr6:150054746(-) A-I      intronic
chr6:150053155(-) A-I      intronic
chr6:150054680(-) A-I      intronic
chr6:150054087(-) A-I      intronic
chr6:150055232(-) A-I      intronic
chr6:150054798(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED NUP43
chr6:150045621(-) A-I exon 3'UTR    15342557
chr6:150045748(-) A-I exon 3'UTR    15258596   //16100382   //22028664   //21960545
chr6:150045749(-) A-I exon 3'UTR    15258596   //16100382
chr6:150045750(-) A-I exon 3'UTR    15258596   //22028664   //22327324
chr6:150045755(-) A-I exon 3'UTR    15258596   //22028664   //21960545
chr6:150045756(-) A-I exon 3'UTR    15258596   //22028664
chr6:150045787(-) A-I exon 3'UTR    15342557   //15258596   //22028664   //21960545
chr6:150045788(-) A-I exon 3'UTR    15258596   //22028664   //21960545   //22327324
chr6:150045816(-) A-I exon 3'UTR    15342557   //22028664
chr6:150045818(-) A-I exon 3'UTR    15342557   //15258596   //22028664
chr6:150045825(-) A-I exon 3'UTR    15342557
chr6:150045848(-) A-I exon 3'UTR    15342557   //22028664   //22327324
chr6:150045858(-) A-I exon 3'UTR    15342557   //22028664
chr6:150045860(-) A-I exon 3'UTR    15342557   //22028664
chr6:150045868(-) A-I exon 3'UTR    15342557   //15258596   //22028664
chr6:150045883(-) A-I exon 3'UTR    15342557   //15258596   //22028664
chr6:150045928(-) A-I exon 3'UTR    15342557   //15258596   //22028664   //21960545
chr6:150045997(-) A-I exon 3'UTR    15258596   //22028664
chr6:150045998(-) A-I exon 3'UTR    15258596   //22028664   //21960545   //22327324
chr6:150046020(-) A-I exon 3'UTR    15258596   //22028664
chr6:150046035(-) A-I exon 3'UTR    15258596   //22028664
chr6:150046432(-) A-I exon 3'UTR    15342557   //21960545   //22327324
chr6:150046511(-) A-I exon 3'UTR    15342557   //15258596
chr6:150046545(-) A-I exon 3'UTR    15342557   //15258596   //22327324
chr6:150046559(-) A-I exon 3'UTR    15342557   //15258596   //22327324
chr6:150046603(-) A-I exon 3'UTR    15342557   //15258596   //22327324
chr6:150046613(-) A-I exon 3'UTR    15342557   //15258596   //21960545
chr6:150046638(-) A-I exon 3'UTR    15258596   //22327324
chr6:150046639(-) A-I exon 3'UTR    15258596
chr6:150046642(-) A-I exon 3'UTR    15342557   //15258596
chr6:150046643(-) A-I exon 3'UTR    15342557   //15258596
chr6:150046649(-) A-I exon 3'UTR    15258596
chr6:150046673(-) A-I exon 3'UTR    15258596   //21960545   //22327324
chr6:150046686(-) A-I exon 3'UTR    15258596   //21960545   //22327324
chr6:150046736(-) A-I exon 3'UTR    15342557   //21960545   //22327324
chr6:150047308(-) A-I exon 3'UTR    15342557
chr6:150047359(-) A-I exon 3'UTR    15342557
chr6:150047362(-) A-I exon 3'UTR    15342557   //15258596
chr6:150047368(-) A-I exon 3'UTR    15342557
chr6:150047370(-) A-I exon 3'UTR    15342557   //15258596
chr6:150047376(-) A-I exon 3'UTR    15342557   //15258596
chr6:150047418(-) A-I exon 3'UTR    15342557   //15258596
chr6:150047420(-) A-I exon 3'UTR    15258596
chr6:150047430(-) A-I exon 3'UTR    15342557   //15258596
chr6:150047455(-) A-I exon 3'UTR    15342557
chr6:150047460(-) A-I exon 3'UTR    15342557   //15258596
chr6:150047466(-) A-I exon 3'UTR    15342557
chr6:150047479(-) A-I exon 3'UTR    15342557
chr6:150047495(-) A-I exon 3'UTR    15342557
chr6:150048048(-) A-I exon 3'UTR    15342557
chr6:150045919(-) A-I exon 3'UTR    22028664   //22327324
chr6:150045920(-) A-I exon 3'UTR    22028664   //22327324
chr6:150045926(-) A-I exon 3'UTR    22327324
chr6:150045929(-) A-I exon 3'UTR    22028664   //22327324
chr6:150045951(-) A-I exon 3'UTR    22028664   //21960545   //22327324
chr6:150046340(-) A-I exon 3'UTR    22327324
chr6:150046349(-) A-I exon 3'UTR    21960545   //22327324
chr6:150046350(-) A-I exon 3'UTR    22327324
chr6:150046415(-) A-I exon 3'UTR    22327324
chr6:150046484(-) A-I exon 3'UTR    22327324
chr6:150046485(-) A-I exon 3'UTR    22327324
chr6:150046495(-) A-I exon 3'UTR    22327324
chr6:150046562(-) A-I exon 3'UTR    22327324
chr6:150051206(-) A-I intron -    22327324
chr6:150051231(-) A-I intron -    22327324
chr6:150051270(-) A-I intron -    22327324
chr6:150051849(-) A-I intron -    22327324
chr6:150045747(-) A-I exon 3'UTR    22028664
chr6:150045796(-) A-I exon 3'UTR    22028664
chr6:150045805(-) A-I exon 3'UTR    22028664
chr6:150045817(-) A-I exon 3'UTR    22028664
chr6:150045828(-) A-I exon 3'UTR    22028664
chr6:150045835(-) A-I exon 3'UTR    22028664
chr6:150045852(-) A-I exon 3'UTR    22028664
chr6:150045857(-) A-I exon 3'UTR    22028664
chr6:150045884(-) A-I exon 3'UTR    22028664
chr6:150045887(-) A-I exon 3'UTR    22028664
chr6:150045895(-) A-I exon 3'UTR    22028664
chr6:150045900(-) A-I exon 3'UTR    22028664
chr6:150045901(-) A-I exon 3'UTR    22028664
chr6:150045907(-) A-I exon 3'UTR    22028664
chr6:150045918(-) A-I exon 3'UTR    22028664
chr6:150045949(-) A-I exon 3'UTR    22028664
chr6:150046678(-) A-I exon 3'UTR    21960545
chr6:150046601(-) A-I exon 3'UTR    21960545
chr6:150046349(-) A-G exon 3'UTR    21725310   //22484847
chr6:150045747(-) A-G exon 3'UTR    22484847
chr6:150045748(-) A-G exon 3'UTR    22484847
chr6:150045749(-) A-G exon 3'UTR    22484847
chr6:150045750(-) A-G exon 3'UTR    22484847
chr6:150045755(-) A-G exon 3'UTR    22484847
chr6:150045756(-) A-G exon 3'UTR    22484847
chr6:150045787(-) A-G exon 3'UTR    22484847
chr6:150045788(-) A-G exon 3'UTR    22484847
chr6:150045817(-) A-G exon 3'UTR    22484847
chr6:150045818(-) A-G exon 3'UTR    22484847
chr6:150045841(-) A-G exon 3'UTR    22484847
chr6:150045848(-) A-G exon 3'UTR    22484847
chr6:150045852(-) A-G exon 3'UTR    22484847
chr6:150045857(-) A-G exon 3'UTR    22484847
chr6:150045858(-) A-G exon 3'UTR    22484847
chr6:150045860(-) A-G exon 3'UTR    22484847
chr6:150045868(-) A-G exon 3'UTR    22484847
chr6:150045883(-) A-G exon 3'UTR    22484847
chr6:150045884(-) A-G exon 3'UTR    22484847
chr6:150045887(-) A-G exon 3'UTR    22484847
chr6:150045918(-) A-G exon 3'UTR    22484847
chr6:150045919(-) A-G exon 3'UTR    22484847
chr6:150045920(-) A-G exon 3'UTR    22484847
chr6:150045926(-) A-G exon 3'UTR    22484847
chr6:150045928(-) A-G exon 3'UTR    22484847
chr6:150045929(-) A-G exon 3'UTR    22484847
chr6:150045943(-) A-G exon 3'UTR    22484847
chr6:150045951(-) A-G exon 3'UTR    22484847
chr6:150045952(-) A-G exon 3'UTR    22484847
chr6:150045957(-) A-G exon 3'UTR    22484847
chr6:150045989(-) A-G exon 3'UTR    22484847
chr6:150045997(-) A-G exon 3'UTR    22484847
chr6:150045998(-) A-G exon 3'UTR    22484847
chr6:150046006(-) A-G exon 3'UTR    22484847
chr6:150046020(-) A-G exon 3'UTR    22484847
chr6:150046340(-) A-G exon 3'UTR    22484847
chr6:150046389(-) A-G exon 3'UTR    22484847
chr6:150046415(-) A-G exon 3'UTR    22484847
chr6:150046423(-) A-G exon 3'UTR    22484847
chr6:150046432(-) A-G exon 3'UTR    22484847
chr6:150046435(-) A-G exon 3'UTR    22484847
chr6:150046471(-) A-G exon 3'UTR    22484847
chr6:150046484(-) A-G exon 3'UTR    22484847
chr6:150046485(-) A-G exon 3'UTR    22484847
chr6:150046486(-) A-G exon 3'UTR    22484847
chr6:150046495(-) A-G exon 3'UTR    22484847
chr6:150046545(-) A-G exon 3'UTR    22484847
chr6:150046559(-) A-G exon 3'UTR    22484847
chr6:150046562(-) A-G exon 3'UTR    22484847
chr6:150046581(-) A-G exon 3'UTR    22484847
chr6:150046601(-) A-G exon 3'UTR    22484847
chr6:150046603(-) A-G exon 3'UTR    22484847
chr6:150046613(-) A-G exon 3'UTR    22484847
chr6:150046638(-) A-G exon 3'UTR    22484847
chr6:150046639(-) A-G exon 3'UTR    22484847
chr6:150046642(-) A-G exon 3'UTR    22484847
chr6:150046643(-) A-G exon 3'UTR    22484847
chr6:150046673(-) A-G exon 3'UTR    22484847
chr6:150046678(-) A-G exon 3'UTR    22484847
chr6:150046681(-) A-G exon 3'UTR    22484847
chr6:150046686(-) A-G exon 3'UTR    22484847
chr6:150046687(-) A-G exon 3'UTR    22484847
chr6:150047287(-) A-G exon 3'UTR    22484847
chr6:150047300(-) A-G exon 3'UTR    22484847
chr6:150047362(-) A-G exon 3'UTR    22484847
chr6:150047370(-) A-G exon 3'UTR    22484847
chr6:150047376(-) A-G exon 3'UTR    22484847
chr6:150047379(-) A-G exon 3'UTR    22484847
chr6:150047384(-) A-G exon 3'UTR    22484847
chr6:150047459(-) A-G exon 3'UTR    22484847
chr6:150047460(-) A-G exon 3'UTR    22484847
chr6:150047495(-) A-G exon 3'UTR    22484847
chr6:150050145(-) C-A intron -    22484847
chr6:150050156(-) A-G intron -    22484847
chr6:150050157(-) A-G intron -    22484847
chr6:150050195(-) A-G intron -    22484847
chr6:150050230(-) T-C intron -    22484847
chr6:150050259(-) A-G intron -    22484847
chr6:150050302(-) A-G intron -    22484847
chr6:150050321(-) A-G intron -    22484847
chr6:150050347(-) A-G intron -    22484847
chr6:150050400(-) A-G intron -    22484847
chr6:150050401(-) A-G intron -    22484847
chr6:150051159(-) A-G intron -    22484847
chr6:150051206(-) A-G intron -    22484847
chr6:150051213(-) A-G intron -    22484847
chr6:150051218(-) A-G intron -    22484847
chr6:150051231(-) A-G intron -    22484847
chr6:150051270(-) A-G intron -    22484847
chr6:150051278(-) A-G intron -    22484847
chr6:150051310(-) A-G intron -    22484847
chr6:150051338(-) A-G intron -    22484847
chr6:150051348(-) A-G intron -    22484847
chr6:150051349(-) A-G intron -    22484847
chr6:150051377(-) A-G intron -    22484847
chr6:150051382(-) A-G intron -    22484847
chr6:150051396(-) A-G intron -    22484847
chr6:150051409(-) A-G intron -    22484847
chr6:150051412(-) A-G intron -    22484847
chr6:150051417(-) A-G intron -    22484847
chr6:150051418(-) A-G intron -    22484847
chr6:150051807(-) A-G intron -    22484847
chr6:150051846(-) A-G intron -    22484847
chr6:150051849(-) A-G intron -    22484847
chr6:150051864(-) A-G intron -    22484847
chr6:150051894(-) A-G intron -    22484847
chr6:150051901(-) A-G intron -    22484847
chr6:150051952(-) A-G intron -    22484847
chr6:150051957(-) A-G intron -    22484847
chr6:150051966(-) A-G intron -    22484847
chr6:150052022(-) A-G intron -    22484847
chr6:150052060(-) A-G intron -    22484847
chr6:150052068(-) A-G intron -    22484847
chr6:150052077(-) G-T intron -    22484847
chr6:150052088(-) G-T intron -    22484847
chr6:150052089(-) T-G intron -    22484847
chr6:150052201(-) A-G intron -    22484847
chr6:150052257(-) A-G intron -    22484847
chr6:150052284(-) A-G intron -    22484847
chr6:150052354(-) A-G intron -    22484847
chr6:150052439(-) A-G intron -    22484847
chr6:150052444(-) A-G intron -    22484847
chr6:150052461(-) A-G intron -    22484847
chr6:150052479(-) A-G intron -    22484847
chr6:150052513(-) A-G intron -    22484847
chr6:150052577(-) A-G intron -    22484847
chr6:150052583(-) A-G intron -    22484847
chr6:150052616(-) A-G intron -    22484847
chr6:150052642(-) A-G intron -    22484847
chr6:150052647(-) A-G intron -    22484847
chr6:150052655(-) A-G intron -    22484847
chr6:150053155(-) A-G intron -    22484847
chr6:150053218(-) A-G intron -    22484847
chr6:150053304(-) A-G intron -    22484847
chr6:150053600(-) A-G intron -    22484847
chr6:150053687(-) C-T intron -    22484847
chr6:150053728(-) A-G intron -    22484847
chr6:150053818(-) G-A intron -    22484847
chr6:150053860(-) A-G intron -    22484847
chr6:150053887(-) A-G intron -    22484847
chr6:150054679(-) A-G intron -    22484847
chr6:150054680(-) A-G intron -    22484847
chr6:150054706(-) A-G intron -    22484847
chr6:150054726(-) A-G intron -    22484847
chr6:150054759(-) A-G intron -    22484847
chr6:150054760(-) A-G intron -    22484847
chr6:150054761(-) A-G intron -    22484847
chr6:150054868(-) A-G intron -    22484847
chr6:150054988(-) A-G intron -    22484847
chr6:150055021(-) A-G intron -    22484847
chr6:150055028(-) A-G intron -    22484847
chr6:150055098(-) A-G intron -    22484847
chr6:150055099(-) A-G intron -    22484847
chr6:150055142(-) A-G intron -    22484847
chr6:150055161(-) A-G intron -    22484847
chr6:150055206(-) A-G intron -    22484847
chr6:150055232(-) A-G intron -    22484847
chr6:150055233(-) A-G intron -    22484847
chr6:150055388(-) A-G intron -    22484847
chr6:150055462(-) A-G intron -    22484847
chr6:150055536(-) A-G intron -    22484847
chr6:150055717(-) A-G intron -    22484847
chr6:150055790(-) A-G intron -    22484847
chr6:150055834(-) A-G intron -    22484847
chr6:150055851(-) A-G intron -    22484847
chr6:150056323(-) A-G intron -    22484847
chr6:150056428(-) A-G intron -    22484847
chr6:150057289(-) A-G intron -    22484847
chr6:150057291(-) A-G intron -    22484847
chr6:150058551(-) A-G intron -    22484847
chr6:150058564(-) A-G intron -    22484847
chr6:150058612(-) A-G intron -    22484847
chr6:150058998(-) A-G intron -    22484847
chr6:150060293(-) A-G intron -    22484847
chr6:150061411(-) G-T intron -    22484847
chr6:150062447(-) A-G intron -    22484847
chr6:150046736(-) A-G exon 3'UTR    22484847
chr6:150046741(-) A-G exon 3'UTR    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase NUP43
chr6:150045456-150045457(-) m6A 3'UTR       27773535
chr6:150045618-150045619(-) m6A 3'UTR       27773535
chr6:150045675-150045676(-) m6A 3'UTR       27773535
chr6:150046032-150046033(-) m6A 3'UTR       27773535
chr6:150046167-150046168(-) m6A 3'UTR       27773535
chr6:150046235-150046236(-) m6A 3'UTR       27773535

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-100-3p
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Fibroblasts|Mesenchymal stem cells     -
NUP43
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Cytosol HCC cell line (HepG2)|K562 cells     -
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus Nasopharyngeal carcinoma cells     20498841
Nucleus HCC cell line (HepG2)|K562 cells     -
Ribosome Colon cancer cells     24393600

Related Drug Information:


Resource Symbol Drug Name PubChem ID PMID
NoncoRNA hsa-miR-100-3p
Methyl (9R,10S,11S,12R,19R)-11-acetyloxy-12-ethyl-4-[(13S,15R,17S)-17-ethyl-17-hydroxy-13-methoxycarbonyl-1,11-diazatetracyclo[13.3.1.04,12.05,10]nonadeca-4(12),5,7,9-tetraen-13-yl]-8-formyl-10-hydroxy-5-methoxy-8,16-diazapentacyclo[10.6.1.01,9.02,7.016,19]nonadeca-2,4,6,13-tetraene-10-carboxylate 134755071       26617885

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-100-3p
Interactor2: NUP43

Evidence Support:


Weak-Evidence RNA-Seq
Prediction-Evidence Targetscan
Support Database ViRBase

References:


PMID 31570108 Target region None
Source ViRBase Interactor1 expression None
Tissue or cell line ARPE-19 human RPE cells Interactor2 expression None
Description Table 1 List of miRNAs that were differentially expressed between EBOV- and mock-infected human RPE cells at 24 h post-infection.Putative target genes in EBOV-infected human RPE cells were predicted from the 15 highly differentially expressed miRNAs using algorithms: 2629 targets by Diana microT; 1799 targets by miRDB; and 14315 targets by TargetScan (Additional file 5).

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