Detail Information

Basic Information:


  VIRBase ID:  

HHID00008343

  Virus:  

Zaire ebolavirus (ZEBOV)

  Host:  

Homo sapiens

  Confidence Score:  

0.5908

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-100-3p:           SPIN1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-100-3p SPIN1
miRBase
Accession/Entrez ID
MIMAT0004512 10927
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - SPIN//TDRD24

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-100-3p
rs1388368183 chr11:122152253    A/G
rs530428149 chr11:122152245    C/T
rs749039221 chr11:122152247    A/G
rs775253529 chr11:122152245    CTA/C
rs909526986 chr11:122152248    T/C
rs1321972926 chr11:122152258    C/T
rs770590792 chr11:122152255    A/G
rs773933142 chr11:122152260    T/C
rs773933142 chr11:122152260    T/G

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR SPIN1
chr9:91086807(+) A-I      intronic
chr9:91087537(+) A-I      intronic
chr9:91008470(+) A-I      intronic
chr9:91088052(+) A-I      intronic
chr9:91088053(+) A-I      intronic
chr9:91008498(+) A-I      intronic
chr9:91008985(+) A-I      intronic
chr9:91012800(+) A-I      intronic
chr9:91012736(+) A-I      intronic
chr9:91009016(+) A-I      intronic
chr9:91012703(+) A-I      intronic
chr9:91011467(+) A-I      intronic
chr9:91011423(+) A-I      intronic
chr9:91010869(+) A-I      intronic
chr9:91010812(+) A-I      intronic
chr9:91009025(+) A-I      intronic
chr9:91013608(+) A-I      intronic
chr9:91008867(+) A-I      intronic
chr9:91008892(+) A-I      intronic
chr9:91008998(+) A-I      intronic
chr9:91009026(+) A-I      intronic
chr9:91010791(+) A-I      intronic
chr9:91010800(+) A-I      intronic
chr9:91011330(+) A-I      intronic
chr9:91011341(+) A-I      intronic
chr9:91011458(+) A-I      intronic
chr9:91012637(+) A-I      intronic
chr9:91012640(+) A-I      intronic
chr9:91012641(+) A-I      intronic
chr9:91013630(+) A-I      intronic
chr9:91011099(+) A-I      intronic
chr9:91013670(+) A-I      intronic
chr9:91013698(+) A-I      intronic
chr9:91015575(+) A-I      intronic
chr9:91015605(+) A-I      intronic
chr9:91016985(+) A-I      intronic
chr9:91017006(+) A-I      intronic
chr9:91011104(+) A-I      intronic
chr9:91017082(+) A-I      intronic
chr9:91017091(+) A-I      intronic
chr9:91017142(+) A-I      intronic
chr9:91015565(+) A-I      intronic
chr9:91017169(+) A-I      intronic
chr9:91017170(+) A-I      intronic
chr9:91020815(+) A-I      intronic
chr9:91020830(+) A-I      intronic
chr9:91021025(+) A-I      intronic
chr9:91021033(+) A-I      intronic
chr9:91021446(+) A-I      intronic
chr9:91022519(+) A-I      intronic
chr9:91022544(+) A-I      intronic
chr9:91026996(+) A-I      intronic
chr9:91018453(+) A-I      intronic
chr9:91018472(+) A-I      intronic
chr9:91018476(+) A-I      intronic
chr9:91021445(+) A-I      intronic
chr9:91031790(+) A-I      intronic
chr9:91087311(+) A-I      intronic
chr9:91011014(+) A-I      intronic
chr9:91011396(+) A-I      intronic
chr9:91011406(+) A-I      intronic
chr9:91011410(+) A-I      intronic
chr9:91010785(+) A-I      intronic
chr9:91010784(+) A-I      intronic
chr9:91010775(+) A-I      intronic
chr9:91010764(+) A-I      intronic
chr9:91010760(+) A-I      intronic
chr9:91009985(+) A-I      intronic
chr9:91021469(+) A-I      intronic
chr9:91009983(+) A-I      intronic
chr9:91012801(+) A-I      intronic
chr9:91013657(+) A-I      intronic
chr9:91013966(+) A-I      intronic
chr9:91022243(+) A-I      intronic
chr9:91022249(+) A-I      intronic
chr9:91022260(+) A-I      intronic
chr9:91024592(+) A-I      intronic
chr9:91024596(+) A-I      intronic
chr9:91014046(+) A-I      intronic
chr9:91024597(+) A-I      intronic
chr9:91024598(+) A-I      intronic
chr9:91024606(+) A-I      intronic
chr9:91014047(+) A-I      intronic
chr9:91014086(+) A-I      intronic
chr9:91014123(+) A-I      intronic
chr9:91015514(+) A-I      intronic
chr9:91026973(+) A-I      intronic
chr9:91026979(+) A-I      intronic
chr9:91015666(+) A-I      intronic
chr9:91027000(+) A-I      intronic
chr9:91027019(+) A-I      intronic
chr9:91035113(+) A-I      intronic
chr9:91035115(+) A-I      intronic
chr9:91035139(+) A-I      intronic
chr9:91035140(+) A-I      intronic
chr9:91035143(+) A-I      intronic
chr9:91038471(+) A-I      intronic
chr9:91038479(+) A-I      intronic
chr9:91038483(+) A-I      intronic
chr9:91015680(+) A-I      intronic
chr9:91015862(+) A-I      intronic
chr9:91038493(+) A-I      intronic
chr9:91038503(+) A-I      intronic
chr9:91038509(+) A-I      intronic
chr9:91038541(+) A-I      intronic
chr9:91017037(+) A-I      intronic
chr9:91017108(+) A-I      intronic
chr9:91018369(+) A-I      intronic
chr9:91018440(+) A-I      intronic
chr9:91018445(+) A-I      intronic
chr9:91038833(+) A-I      intronic
chr9:91040435(+) A-I      intronic
chr9:91040437(+) A-I      intronic
chr9:91040454(+) A-I      intronic
chr9:91009930(+) A-I      intronic
chr9:91009805(+) A-I      intronic
chr9:91040466(+) A-I      intronic
chr9:91040482(+) A-I      intronic
chr9:91040495(+) A-I      intronic
chr9:91040511(+) A-I      intronic
chr9:91040539(+) A-I      intronic
chr9:91046702(+) A-I      intronic
chr9:91046707(+) A-I      intronic
chr9:91046709(+) A-I      intronic
chr9:91009038(+) A-I      intronic
chr9:91008984(+) A-I      intronic
chr9:91008928(+) A-I      intronic
chr9:91046710(+) A-I      intronic
chr9:91008516(+) A-I      intronic
chr9:91008456(+) A-I      intronic
chr9:91018465(+) A-I      intronic
chr9:91018473(+) A-I      intronic
chr9:91018497(+) A-I      intronic
chr9:91018511(+) A-I      intronic
chr9:91019576(+) A-I      intronic
chr9:91019645(+) A-I      intronic
chr9:91019669(+) A-I      intronic
chr9:91019671(+) A-I      intronic
chr9:91019673(+) A-I      intronic
chr9:91020533(+) A-I      intronic
chr9:91020558(+) A-I      intronic
chr9:91021269(+) A-I      intronic
chr9:91021271(+) A-I      intronic
chr9:91021285(+) A-I      intronic
chr9:91021307(+) A-I      intronic
chr9:91022464(+) A-I      intronic
chr9:91022511(+) A-I      intronic
chr9:91022777(+) A-I      intronic
chr9:91022891(+) A-I      intronic
chr9:91022903(+) A-I      intronic
chr9:91022916(+) A-I      intronic
chr9:91022917(+) A-I      intronic
chr9:91022934(+) A-I      intronic
chr9:91023766(+) A-I      intronic
chr9:91024547(+) A-I      intronic
chr9:91024562(+) A-I      intronic
chr9:91024632(+) A-I      intronic
chr9:91024642(+) A-I      intronic
chr9:91024646(+) A-I      intronic
chr9:91024655(+) A-I      intronic
chr9:91024674(+) A-I      intronic
chr9:91026468(+) A-I      intronic
chr9:91026472(+) A-I      intronic
chr9:91026625(+) A-I      intronic
chr9:91026837(+) A-I      intronic
chr9:91026870(+) A-I      intronic
chr9:91028193(+) A-I      intronic
chr9:91028448(+) A-I      intronic
chr9:91028532(+) A-I      intronic
chr9:91029899(+) A-I      intronic
chr9:91029922(+) A-I      intronic
chr9:91030405(+) A-I      intronic
chr9:91030456(+) A-I      intronic
chr9:91030470(+) A-I      intronic
chr9:91031379(+) A-I      intronic
chr9:91035101(+) A-I      intronic
chr9:91035270(+) A-I      intronic
chr9:91040323(+) A-I      intronic
chr9:91040431(+) A-I      intronic
chr9:91040531(+) A-I      intronic
chr9:91040535(+) A-I      intronic
chr9:91048053(+) A-I      intronic
chr9:91048134(+) A-I      intronic
chr9:91048272(+) A-I      intronic
chr9:91049809(+) A-I      intronic
chr9:91049828(+) A-I      intronic
chr9:91049846(+) A-I      intronic
chr9:91050269(+) A-I      intronic
chr9:91050285(+) A-I      intronic
chr9:91051085(+) A-I      intronic
chr9:91051809(+) A-I      intronic
chr9:91052151(+) A-I      intronic
chr9:91055691(+) A-I      intronic
chr9:91055694(+) A-I      intronic
chr9:91056447(+) A-I      intronic
chr9:91057497(+) A-I      intronic
chr9:91057562(+) A-I      intronic
chr9:91063401(+) A-I      intronic
chr9:91063464(+) A-I      intronic
chr9:91070216(+) A-I      intronic
chr9:91070228(+) A-I      intronic
chr9:91070250(+) A-I      intronic
chr9:91070251(+) A-I      intronic
chr9:91072324(+) A-I      intronic
chr9:91086799(+) A-I      intronic
chr9:91038930(+) A-I      intronic
chr9:91017024(+) A-I      intronic
chr9:91015505(+) A-I      intronic
chr9:91008840(+) A-I      intronic
chr9:91008644(+) A-I      intronic
chr9:91027788(+) A-I      intronic
chr9:91015742(+) A-I      intronic
chr9:91030878(+) A-I      intronic
chr9:91026613(+) A-I      intronic
chr9:91014102(+) A-I      intronic
chr9:91022517(+) A-I      intronic
chr9:91085689(+) A-I      intronic
chr9:91022321(+) A-I      intronic
chr9:91020327(+) A-I      intronic
chr9:91012916(+) A-I      intronic
chr9:91014146(+) A-I      intronic
chr9:91026704(+) A-I      intronic
chr9:91027679(+) A-I      intronic
chr9:91027699(+) A-I      intronic
chr9:91022181(+) A-I      intronic
chr9:91070212(+) A-I      intronic
chr9:91036268(+) A-I      intronic
chr9:91036330(+) A-I      intronic
chr9:91010894(+) A-I      intronic
chr9:91012937(+) A-I      intronic
chr9:91022117(+) A-I      intronic
chr9:91086850(+) A-I      intronic
chr9:91027827(+) A-I      intronic
chr9:91026506(+) A-I      intronic
chr9:91052945(+) A-I      intronic
chr9:91008802(+) A-I      intronic
chr9:91022179(+) A-I      intronic
chr9:91056967(+) A-I      intronic
chr9:91020878(+) A-I      intronic
chr9:91026862(+) A-I      intronic
chr9:91022454(+) A-I      intronic
chr9:91038428(+) A-I      intronic
chr9:91038397(+) A-I      intronic
chr9:91031752(+) A-I      intronic
chr9:91068571(+) A-I      intronic
chr9:91010560(+) A-I      intronic
chr9:91070277(+) A-I      intronic
chr9:91038712(+) A-I      intronic
chr9:91022245(+) A-I      intronic
chr9:91023706(+) A-I      intronic
chr9:91024171(+) A-I      intronic
chr9:91026692(+) A-I      intronic
chr9:91022222(+) A-I      intronic
chr9:91014221(+) A-I      intronic
chr9:91010914(+) A-I      intronic
chr9:91013016(+) A-I      intronic
chr9:91015528(+) A-I      intronic
chr9:91028378(+) A-I      intronic
chr9:91018527(+) A-I      intronic
chr9:91036317(+) A-I      intronic
chr9:91063447(+) A-I      intronic
chr9:91084575(+) A-I      intronic
chr9:91015649(+) A-I      intronic
chr9:91021414(+) A-I      intronic
chr9:91015781(+) A-I      intronic
chr9:91038393(+) A-I      intronic
chr9:91026665(+) A-I      intronic
chr9:91012728(+) A-I      intronic
chr9:91021392(+) A-I      intronic
chr9:91070711(+) A-I      intronic
chr9:91014129(+) A-I      intronic
chr9:91040383(+) A-I      intronic
chr9:91053018(+) A-I      intronic
chr9:91085709(+) A-I      intronic
chr9:91085639(+) A-I      intronic
chr9:91023357(+) A-I      intronic
chr9:91022470(+) A-I      intronic
chr9:91052819(+) A-I      intronic
chr9:91038967(+) A-I      intronic
chr9:91086966(+) A-I      intronic
chr9:91015857(+) A-I      intronic
chr9:91040446(+) A-I      intronic
chr9:91018541(+) A-I      intronic
chr9:91027728(+) A-I      intronic
chr9:91020887(+) A-I      intronic
chr9:91015710(+) A-I      intronic
chr9:91018645(+) A-I      intronic
chr9:91037777(+) A-I      intronic
chr9:91021060(+) A-I      intronic
chr9:91008500(+) A-I      intronic
chr9:91026843(+) A-I      intronic
chr9:91024090(+) A-I      intronic
chr9:91038828(+) A-I      intronic
chr9:91015764(+) A-I      intronic
chr9:91017097(+) A-I      intronic
chr9:91010802(+) A-I      intronic
chr9:91008843(+) A-I      intronic
chr9:91026460(+) A-I      intronic
chr9:91046835(+) A-I      intronic
chr9:91072317(+) A-I      intronic
chr9:91022262(+) A-I      intronic
chr9:91022810(+) A-I      intronic
chr9:91027629(+) A-I      intronic
chr9:91027646(+) A-I      intronic
chr9:91029948(+) A-I      intronic
chr9:91012867(+) A-I      intronic
chr9:91010842(+) A-I      intronic
chr9:91011438(+) A-I      intronic
chr9:91019553(+) A-I      intronic
chr9:91023481(+) A-I      intronic
chr9:91017011(+) A-I      intronic
chr9:91021481(+) A-I      intronic
chr9:91015692(+) A-I      intronic
chr9:91022342(+) A-I      intronic
chr9:91052286(+) A-I      intronic
chr9:91008471(+) A-I      intronic
chr9:91086853(+) A-I      intronic
chr9:91024050(+) A-I      intronic
chr9:91022320(+) A-I      intronic
chr9:91012662(+) A-I      intronic
chr9:91015590(+) A-I      intronic
chr9:91021454(+) A-I      intronic
chr9:91008947(+) A-I      intronic
chr9:91038820(+) A-I      intronic
chr9:91038593(+) A-I      intronic
chr9:91030362(+) A-I      intronic
chr9:91022295(+) A-I      intronic
chr9:91036431(+) A-I      intronic
chr9:91020776(+) A-I      intronic
chr9:91011297(+) A-I      intronic
chr9:91010815(+) A-I      intronic
chr9:91015807(+) A-I      intronic
chr9:91068715(+) A-I      intronic
chr9:91038499(+) A-I      intronic
chr9:91018446(+) A-I      intronic
chr9:91015506(+) A-I      intronic
chr9:91020309(+) A-I      intronic
chr9:91017073(+) A-I      intronic
chr9:91047587(+) A-I      intronic
chr9:91020976(+) A-I      intronic
chr9:91020324(+) A-I      intronic
chr9:91026691(+) A-I      intronic
chr9:91021345(+) A-I      intronic
chr9:91012676(+) A-I      intronic
chr9:91063469(+) A-I      intronic
chr9:91031556(+) A-I      intronic
chr9:91038758(+) A-I      intronic
chr9:91008433(+) A-I      intronic
chr9:91022151(+) A-I      intronic
chr9:91024600(+) A-I      intronic
chr9:91063454(+) A-I      intronic
chr9:91017007(+) A-I      intronic
chr9:91010562(+) A-I      intronic
chr9:91018442(+) A-I      intronic
chr9:91015527(+) A-I      intronic
chr9:91049716(+) A-I      intronic
chr9:91011250(+) A-I      intronic
chr9:91052972(+) A-I      intronic
chr9:91021299(+) A-I      intronic
chr9:91012663(+) A-I      intronic
chr9:91038781(+) A-I      intronic
chr9:91010841(+) A-I      intronic
chr9:91030358(+) A-I      intronic
chr9:91010626(+) A-I      intronic
chr9:91052338(+) A-I      intronic
chr9:91072297(+) A-I      intronic
chr9:91021398(+) A-I      intronic
chr9:91013595(+) A-I      intronic
chr9:91040529(+) A-I      intronic
chr9:91010903(+) A-I      intronic
chr9:91018615(+) A-I      intronic
chr9:91020528(+) A-I      intronic
chr9:91026455(+) A-I      intronic
chr9:91038821(+) A-I      intronic
chr9:91012977(+) A-I      intronic
chr9:91088223(+) A-I      intronic
chr9:91013718(+) A-I      intronic
chr9:91028030(+) A-I      intronic
chr9:91052260(+) A-I      intronic
chr9:91026452(+) A-I      intronic
chr9:91008888(+) A-I      intronic
chr9:91013077(+) A-I      intronic
chr9:91013591(+) A-I      intronic
chr9:91021383(+) A-I      intronic
chr9:91012898(+) A-I      intronic
chr9:91056527(+) A-I      intronic
chr9:91021347(+) A-I      intronic
chr9:91018505(+) A-I      intronic
chr9:91023529(+) A-I      intronic
chr9:91040540(+) A-I      intronic
chr9:91050192(+) A-I      intronic
chr9:91053001(+) A-I      intronic
chr9:91012713(+) A-I      intronic
chr9:91024539(+) A-I      intronic
chr9:91010572(+) A-I      intronic
chr9:91015585(+) A-I      intronic
chr9:91038957(+) A-I      intronic
chr9:91017160(+) A-I      intronic
chr9:91012967(+) A-I      intronic
chr9:91012900(+) A-I      intronic
chr9:91015817(+) A-I      intronic
chr9:91013673(+) A-I      intronic
chr9:91023764(+) A-I      intronic
chr9:91019575(+) A-I      intronic
chr9:91018495(+) A-I      intronic
chr9:91009935(+) A-I      intronic
chr9:91047601(+) A-I      intronic
chr9:91072323(+) A-I      intronic
chr9:91015701(+) A-I      intronic
chr9:91010999(+) A-I      intronic
chr9:91020576(+) A-I      intronic
chr9:91027064(+) A-I      intronic
chr9:91038433(+) A-I      intronic
chr9:91008961(+) A-I      intronic
chr9:91038826(+) A-I      intronic
chr9:91012623(+) A-I      intronic
chr9:91023761(+) A-I      intronic
chr9:91020588(+) A-I      intronic
chr9:91018377(+) A-I      intronic
chr9:91011303(+) A-I      intronic
chr9:91068581(+) A-I      intronic
chr9:91011095(+) A-I      intronic
chr9:91010702(+) A-I      intronic
chr9:91015730(+) A-I      intronic
chr9:91024473(+) A-I      intronic
chr9:91013590(+) A-I      intronic
chr9:91046853(+) A-I      intronic
chr9:91011075(+) A-I      intronic
chr9:91040440(+) A-I      intronic
chr9:91022769(+) A-I      intronic
chr9:91008993(+) A-I      intronic
chr9:91068663(+) A-I      intronic
chr9:91024496(+) A-I      intronic
chr9:91010761(+) A-I      intronic
chr9:91022234(+) A-I      intronic
chr9:91012923(+) A-I      intronic
chr9:91040345(+) A-I      intronic
chr9:91010944(+) A-I      intronic
chr9:91011013(+) A-I      intronic
chr9:91037774(+) A-I      intronic
chr9:91017036(+) A-I      intronic
chr9:91036462(+) A-I      intronic
chr9:91022269(+) A-I      intronic
chr9:91010809(+) A-I      intronic
chr9:91012773(+) A-I      intronic
chr9:91008532(+) A-I      intronic
chr9:91022333(+) A-I      intronic
chr9:91009984(+) A-I      intronic
chr9:91020481(+) A-I      intronic
chr9:91008999(+) A-I      intronic
chr9:91019763(+) A-I      intronic
chr9:91010638(+) A-I      intronic
chr9:91055768(+) A-I      intronic
chr9:91046736(+) A-I      intronic
chr9:91018499(+) A-I      intronic
chr9:91014076(+) A-I      intronic
chr9:91013620(+) A-I      intronic
chr9:91008444(+) A-I      intronic
chr9:91012719(+) A-I      intronic
chr9:91015599(+) A-I      intronic
chr9:91028411(+) A-I      intronic
chr9:91038434(+) A-I      intronic
chr9:91015496(+) A-I      intronic
chr9:91009997(+) A-I      intronic
chr9:91024184(+) A-I      intronic
chr9:91015888(+) A-I      intronic
chr9:91036297(+) A-I      intronic
chr9:91028392(+) A-I      intronic
chr9:91024603(+) A-I      intronic
chr9:91017083(+) A-I      intronic
chr9:91028514(+) A-I      intronic
chr9:91037764(+) A-I      intronic
chr9:91023967(+) A-I      intronic
chr9:91036304(+) A-I      intronic
chr9:91008902(+) A-I      intronic
chr9:91010553(+) A-I      intronic
chr9:91020538(+) A-I      intronic
chr9:91038511(+) A-I      intronic
chr9:91022793(+) A-I      intronic
chr9:91035105(+) A-I      intronic
chr9:91037898(+) A-I      intronic
chr9:91049820(+) A-I      intronic
chr9:91020877(+) A-I      intronic
chr9:91015672(+) A-I      intronic
chr9:91086449(+) A-I      intronic
chr9:91040472(+) A-I      intronic
chr9:91026909(+) A-I      intronic
chr9:91011021(+) A-I      intronic
chr9:91023839(+) A-I      intronic
chr9:91027725(+) A-I      intronic
chr9:91024093(+) A-I      intronic
chr9:91018479(+) A-I      intronic
chr9:91013756(+) A-I      intronic
chr9:91027765(+) A-I      intronic
chr9:91017093(+) A-I      intronic
chr9:91021024(+) A-I      intronic
chr9:91030411(+) A-I      intronic
chr9:91026558(+) A-I      intronic
chr9:91040331(+) A-I      intronic
chr9:91028438(+) A-I      intronic
chr9:91011270(+) A-I      intronic
chr9:91010776(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED SPIN1
chr9:91026455(+) A-I intron -    15342557
chr9:91026460(+) A-I intron -    15342557
chr9:91026477(+) A-I intron -    15342557
chr9:91027685(+) A-I intron -    15342557
chr9:91027711(+) A-I intron -    15342557
chr9:91027728(+) A-I intron -    15342557
chr9:91027765(+) A-I intron -    15342557
chr9:91027773(+) A-I intron -    15342557
chr9:91027788(+) A-I intron -    15342557
chr9:91027827(+) A-I intron -    15342557
chr9:91028061(+) A-I intron -    15342557
chr9:91028075(+) A-I intron -    15342557
chr9:91028392(+) A-I intron -    15342557
chr9:91028514(+) A-I intron -    15342557
chr9:91011472(+) A-G intron -    22484847
chr9:91017007(+) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase SPIN1
chr9:91003414-91003415(+) m6A 5'UTR//exon       24209618//24981863
chr9:91003430-91003431(+) m6A 5'UTR//exon       24209618//24981863
chr9:91030558-91030559(+) m6A exon//intron       24209618
chr9:91030566-91030567(+) m6A exon//intron       24209618
chr9:91063893-91063894(+) m6A CDS//exon       -
chr9:91077413-91077414(+) m6A CDS//exon//intron       -
chr9:91077440-91077441(+) m6A CDS//exon//intron       -
chr9:91077463-91077464(+) m6A CDS//exon//intron       -
chr9:91077531-91077532(+) m6A CDS//exon//intron       24284625//24981863//22608085
chr9:91077541-91077542(+) m6A CDS//exon//intron       24284625//24981863//22608085
chr9:91077605-91077606(+) m6A CDS//exon//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr9:91077611-91077612(+) m6A CDS//exon//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr9:91077619-91077620(+) Am CDS//exon//intron       -
chr9:91083319-91083320(+) m6A CDS//exon       24284625//24209618//24981863//27773535//22575960//22608085
chr9:91083344-91083345(+) m6A CDS//exon       24284625//24209618//24981863//27773535//22575960//22608085
chr9:91083357-91083358(+) m6A CDS//exon       24284625//24209618//24981863//27773535//22575960//22608085
chr9:91083418-91083419(+) m6A CDS//exon       24284625//24209618//24981863//27773535//22575960//22608085
chr9:91083448-91083449(+) m6A CDS//exon       24284625//24209618//24981863//27773535//22575960//22608085
chr9:91090017-91090018(+) m6A CDS//exon       24284625//24209618//24981863//22575960//22608085
chr9:91090034-91090035(+) m6A CDS//exon       24284625//24209618//24981863//22575960//22608085
chr9:91090050-91090051(+) m6A CDS//exon       24284625//24209618//24981863//26404942//22575960//22608085
chr9:91090087-91090088(+) m6A CDS//exon       24284625//24209618//24981863//26404942//22575960//22608085
chr9:91090183-91090184(+) m6A CDS//exon       24284625//24209618//24981863//26404942//22575960//22608085
chr9:91090204-91090205(+) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//22575960//22608085
chr9:91090223-91090224(+) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//22575960//22608085
chr9:91090246-91090247(+) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//22575960//22608085
chr9:91090254-91090255(+) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//22575960//22608085
chr9:91090299-91090300(+) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//22575960//22608085
chr9:91090321-91090322(+) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//22575960//22608085
chr9:91090356-91090357(+) m6A 3'UTR//exon       24284625//24981863//26404942//22608085
chr9:91090381-91090382(+) m6A 3'UTR//exon       24284625//26404942//22608085
chr9:91090881-91090882(+) m6A 3'UTR       26404942

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-100-3p
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Fibroblasts|Mesenchymal stem cells     -
SPIN1
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Membrane HCC cell line (HepG2)     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -

Related Drug Information:


Resource Symbol Drug Name PubChem ID PMID
NoncoRNA hsa-miR-100-3p
Methyl (9R,10S,11S,12R,19R)-11-acetyloxy-12-ethyl-4-[(13S,15R,17S)-17-ethyl-17-hydroxy-13-methoxycarbonyl-1,11-diazatetracyclo[13.3.1.04,12.05,10]nonadeca-4(12),5,7,9-tetraen-13-yl]-8-formyl-10-hydroxy-5-methoxy-8,16-diazapentacyclo[10.6.1.01,9.02,7.016,19]nonadeca-2,4,6,13-tetraene-10-carboxylate 134755071       26617885

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-100-3p
Interactor2: SPIN1

Evidence Support:


Weak-Evidence RNA-Seq
Prediction-Evidence DIANA-microT//Targetscan
Support Database ViRBase

References:


PMID 31570108 Target region None
Source ViRBase Interactor1 expression None
Tissue or cell line ARPE-19 human RPE cells Interactor2 expression None
Description Table 1 List of miRNAs that were differentially expressed between EBOV- and mock-infected human RPE cells at 24 h post-infection.Putative target genes in EBOV-infected human RPE cells were predicted from the 15 highly differentially expressed miRNAs using algorithms: 2629 targets by Diana microT; 1799 targets by miRDB; and 14315 targets by TargetScan (Additional file 5).

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