Detail Information

Basic Information:


  VIRBase ID:  

HHID00008093

  Virus:  

Zaire ebolavirus (ZEBOV)

  Host:  

Homo sapiens

  Confidence Score:  

0.5711

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-100-3p:           MDM2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-100-3p MDM2
miRBase
Accession/Entrez ID
MIMAT0004512 4193
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - ACTFS//hdm2//HDMX//LSKB

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-100-3p
rs1388368183 chr11:122152253    A/G
rs530428149 chr11:122152245    C/T
rs749039221 chr11:122152247    A/G
rs775253529 chr11:122152245    CTA/C
rs909526986 chr11:122152248    T/C
rs1321972926 chr11:122152258    C/T
rs770590792 chr11:122152255    A/G
rs773933142 chr11:122152260    T/C
rs773933142 chr11:122152260    T/G

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR MDM2
chr12:69237098(+) A-I      3'UTR
chr12:69237511(+) A-I      3'UTR
chr12:69237518(+) A-I      3'UTR
chr12:69237542(+) A-I      3'UTR
chr12:69237551(+) A-I      3'UTR
chr12:69228111(+) A-I      intronic
chr12:69228093(+) A-I      intronic
chr12:69228101(+) A-I      intronic
chr12:69228095(+) A-I      intronic
chr12:69228072(+) A-I      intronic
chr12:69228069(+) A-I      intronic
chr12:69228066(+) A-I      intronic
chr12:69215399(+) A-I      intronic
chr12:69215342(+) A-I      intronic
chr12:69215293(+) A-I      intronic
chr12:69215274(+) A-I      intronic
chr12:69215232(+) A-I      intronic
chr12:69237506(+) A-I      3'UTR
chr12:69237024(+) A-I      3'UTR
chr12:69237083(+) A-I      3'UTR
chr12:69237081(+) A-I      3'UTR
chr12:69234673(+) A-I      3'UTR
chr12:69234186(+) A-I      3'UTR
chr12:69237079(+) A-I      3'UTR
chr12:69237077(+) A-I      3'UTR
chr12:69236992(+) A-I      3'UTR
chr12:69236998(+) A-I      3'UTR
chr12:69237003(+) A-I      3'UTR
chr12:69237019(+) A-I      3'UTR
chr12:69237032(+) A-I      3'UTR
chr12:69237035(+) A-I      3'UTR
chr12:69237041(+) A-I      3'UTR
chr12:69237047(+) A-I      3'UTR
chr12:69237048(+) A-I      3'UTR
chr12:69237049(+) A-I      3'UTR
chr12:69237050(+) A-I      3'UTR
chr12:69215028(+) A-I      intronic
chr12:69215102(+) A-I      intronic
chr12:69215247(+) A-I      intronic
chr12:69215256(+) A-I      intronic
chr12:69215270(+) A-I      intronic
chr12:69215283(+) A-I      intronic
chr12:69215302(+) A-I      intronic
chr12:69215324(+) A-I      intronic
chr12:69215347(+) A-I      intronic
chr12:69215431(+) A-I      intronic
chr12:69215503(+) A-I      intronic
chr12:69215735(+) A-I      intronic
chr12:69215771(+) A-I      intronic
chr12:69215790(+) A-I      intronic
chr12:69215861(+) A-I      intronic
chr12:69215892(+) A-I      intronic
chr12:69215894(+) A-I      intronic
chr12:69224494(+) A-I      intronic
chr12:69224502(+) A-I      intronic
chr12:69224622(+) A-I      intronic
chr12:69224636(+) A-I      intronic
chr12:69224661(+) A-I      intronic
chr12:69226366(+) A-I      intronic
chr12:69226372(+) A-I      intronic
chr12:69226377(+) A-I      intronic
chr12:69226392(+) A-I      intronic
chr12:69226486(+) A-I      intronic
chr12:69226519(+) A-I      intronic
chr12:69226652(+) A-I      intronic
chr12:69226698(+) A-I      intronic
chr12:69226719(+) A-I      intronic
chr12:69226783(+) A-I      intronic
chr12:69226785(+) A-I      intronic
chr12:69226817(+) A-I      intronic
chr12:69226827(+) A-I      intronic
chr12:69226831(+) A-I      intronic
chr12:69226834(+) A-I      intronic
chr12:69204018(+) A-I      intronic
chr12:69204022(+) A-I      intronic
chr12:69204042(+) A-I      intronic
chr12:69204093(+) A-I      intronic
chr12:69204098(+) A-I      intronic
chr12:69204102(+) A-I      intronic
chr12:69204103(+) A-I      intronic
chr12:69204106(+) A-I      intronic
chr12:69204383(+) A-I      intronic
chr12:69204407(+) A-I      intronic
chr12:69204443(+) A-I      intronic
chr12:69204502(+) A-I      intronic
chr12:69204726(+) A-I      intronic
chr12:69204745(+) A-I      intronic
chr12:69204750(+) A-I      intronic
chr12:69204785(+) A-I      intronic
chr12:69204828(+) A-I      intronic
chr12:69204866(+) A-I      intronic
chr12:69204867(+) A-I      intronic
chr12:69204879(+) A-I      intronic
chr12:69211266(+) A-I      intronic
chr12:69211268(+) A-I      intronic
chr12:69211275(+) A-I      intronic
chr12:69211283(+) A-I      intronic
chr12:69211291(+) A-I      intronic
chr12:69211343(+) A-I      intronic
chr12:69211350(+) A-I      intronic
chr12:69211352(+) A-I      intronic
chr12:69211353(+) A-I      intronic
chr12:69211365(+) A-I      intronic
chr12:69211377(+) A-I      intronic
chr12:69211378(+) A-I      intronic
chr12:69211379(+) A-I      intronic
chr12:69211382(+) A-I      intronic
chr12:69211438(+) A-I      intronic
chr12:69211621(+) A-I      intronic
chr12:69211658(+) A-I      intronic
chr12:69211682(+) A-I      intronic
chr12:69211714(+) A-I      intronic
chr12:69211763(+) A-I      intronic
chr12:69211802(+) A-I      intronic
chr12:69211824(+) A-I      intronic
chr12:69214898(+) A-I      intronic
chr12:69214921(+) A-I      intronic
chr12:69214994(+) A-I      intronic
chr12:69214945(+) A-I      intronic
chr12:69215800(+) A-I      intronic
chr12:69224715(+) A-I      intronic
chr12:69223388(+) A-I      intronic
chr12:69211441(+) A-I      intronic
chr12:69215253(+) A-I      intronic
chr12:69228355(+) A-I      intronic
chr12:69209491(+) A-I      intronic
chr12:69226442(+) A-I      intronic
chr12:69203908(+) A-I      intronic
chr12:69214892(+) A-I      intronic
chr12:69223455(+) A-I      intronic
chr12:69215269(+) A-I      intronic
chr12:69215893(+) A-I      intronic
chr12:69204426(+) A-I      intronic
chr12:69226434(+) A-I      intronic
chr12:69211677(+) A-I      intronic
chr12:69203983(+) A-I      intronic
chr12:69211354(+) A-I      intronic
chr12:69204100(+) A-I      intronic
chr12:69224544(+) A-I      intronic
chr12:69215341(+) A-I      intronic
chr12:69203828(+) A-I      intronic
chr12:69225714(+) A-I      intronic
chr12:69223381(+) A-I      intronic
chr12:69204011(+) A-I      intronic
chr12:69215261(+) A-I      intronic
chr12:69223387(+) A-I      intronic
chr12:69211344(+) A-I      intronic
chr12:69228102(+) A-I      intronic
chr12:69211522(+) A-I      intronic
chr12:69204303(+) A-I      intronic
chr12:69211435(+) A-I      intronic
chr12:69203934(+) A-I      intronic
chr12:69211408(+) A-I      intronic
chr12:69215405(+) A-I      intronic
chr12:69211780(+) A-I      intronic
chr12:69211759(+) A-I      intronic
chr12:69223345(+) A-I      intronic
chr12:69224755(+) A-I      intronic
chr12:69223360(+) A-I      intronic
chr12:69215774(+) A-I      intronic
chr12:69211717(+) A-I      intronic
chr12:69224716(+) A-I      intronic
chr12:69226395(+) A-I      intronic
chr12:69224598(+) A-I      intronic
chr12:69226378(+) A-I      intronic
chr12:69215008(+) A-I      intronic
chr12:69225704(+) A-I      intronic
chr12:69204040(+) A-I      intronic
chr12:69203931(+) A-I      intronic
chr12:69238673(+) A-I      3'UTR
chr12:69234810(+) A-I      3'UTR
chr12:69238769(+) A-I      3'UTR
chr12:69234475(+) A-I      3'UTR
chr12:69234764(+) A-I      3'UTR
chr12:69231233(+) A-I      intronic
chr12:69228005(+) A-I      intronic
chr12:69224591(+) A-I      intronic
chr12:69215736(+) A-I      intronic
chr12:69211297(+) A-I      intronic
chr12:69228036(+) A-I      intronic
chr12:69215423(+) A-I      intronic
chr12:69226324(+) A-I      intronic
chr12:69224580(+) A-I      intronic
chr12:69225724(+) A-I      intronic
chr12:69205717(+) A-I      intronic
chr12:69203941(+) A-I      intronic
chr12:69211409(+) A-I      intronic
chr12:69215025(+) A-I      intronic
chr12:69225754(+) A-I      intronic
chr12:69204676(+) A-I      intronic
chr12:69223435(+) A-I      intronic
chr12:69215752(+) A-I      intronic
chr12:69207877(+) A-I      intronic
chr12:69211480(+) A-I      intronic
chr12:69224690(+) A-I      intronic
chr12:69203882(+) A-I      intronic
chr12:69204825(+) A-I      intronic
chr12:69214932(+) A-I      intronic
chr12:69215366(+) A-I      intronic
chr12:69226450(+) A-I      intronic
chr12:69203859(+) A-I      intronic
chr12:69214931(+) A-I      intronic
chr12:69225805(+) A-I      intronic
chr12:69211812(+) A-I      intronic
chr12:69211771(+) A-I      intronic
chr12:69209414(+) A-I      intronic
chr12:69214967(+) A-I      intronic
chr12:69211296(+) A-I      intronic
chr12:69224638(+) A-I      intronic
chr12:69215787(+) A-I      intronic
chr12:69215325(+) A-I      intronic
chr12:69203942(+) A-I      intronic
chr12:69226432(+) A-I      intronic
chr12:69209355(+) A-I      intronic
chr12:69211857(+) A-I      intronic
chr12:69225743(+) A-I      intronic
chr12:69215248(+) A-I      intronic
chr12:69215699(+) A-I      intronic
chr12:69211835(+) A-I      intronic
chr12:69228031(+) A-I      intronic
chr12:69215409(+) A-I      intronic
chr12:69214927(+) A-I      intronic
chr12:69215760(+) A-I      intronic
chr12:69211707(+) A-I      intronic
chr12:69214957(+) A-I      intronic
chr12:69211754(+) A-I      intronic
chr12:69215849(+) A-I      intronic
chr12:69211280(+) A-I      intronic
chr12:69224646(+) A-I      intronic
chr12:69218816(+) A-I      intronic
chr12:69216718(+) A-I      intronic
chr12:69224508(+) A-I      intronic
chr12:69225731(+) A-I      intronic
chr12:69212774(+) A-I      intronic
chr12:69214928(+) A-I      intronic
chr12:69215086(+) A-I      intronic
chr12:69203917(+) A-I      intronic
chr12:69204306(+) A-I      intronic
chr12:69204746(+) A-I      intronic
chr12:69226312(+) A-I      intronic
chr12:69223393(+) A-I      intronic
chr12:69224743(+) A-I      intronic
chr12:69215225(+) A-I      intronic
chr12:69226563(+) A-I      intronic
chr12:69226316(+) A-I      intronic
chr12:69203936(+) A-I      intronic
chr12:69215333(+) A-I      intronic
chr12:69215392(+) A-I      intronic
chr12:69226371(+) A-I      intronic
chr12:69225638(+) A-I      intronic
chr12:69228075(+) A-I      intronic
chr12:69223399(+) A-I      intronic
chr12:69228088(+) A-I      intronic
chr12:69204668(+) A-I      intronic
chr12:69223331(+) A-I      intronic
chr12:69204448(+) A-I      intronic
chr12:69204772(+) A-I      intronic
chr12:69226888(+) A-I      intronic
chr12:69215761(+) A-I      intronic
chr12:69204811(+) A-I      intronic
chr12:69203891(+) A-I      intronic
chr12:69223467(+) A-I      intronic
chr12:69203969(+) A-I      intronic
chr12:69203858(+) A-I      intronic
chr12:69222225(+) A-I      intronic
chr12:69226422(+) A-I      intronic
chr12:69221772(+) A-I      intronic
chr12:69215245(+) A-I      intronic
chr12:69212686(+) A-I      intronic
chr12:69211803(+) A-I      intronic
chr12:69224664(+) A-I      intronic
chr12:69226445(+) A-I      intronic
chr12:69204480(+) A-I      intronic
chr12:69215822(+) A-I      intronic
chr12:69215820(+) A-I      intronic
chr12:69204099(+) A-I      intronic
chr12:69226314(+) A-I      intronic
chr12:69228061(+) A-I      intronic
chr12:69211346(+) A-I      intronic
chr12:69226353(+) A-I      intronic
chr12:69211813(+) A-I      intronic
chr12:69223363(+) A-I      intronic
chr12:69228438(+) A-I      intronic
chr12:69224620(+) A-I      intronic
chr12:69203953(+) A-I      intronic
chr12:69215353(+) A-I      intronic
chr12:69226759(+) A-I      intronic
chr12:69211315(+) A-I      intronic
chr12:69215700(+) A-I      intronic
chr12:69214850(+) A-I      intronic
chr12:69204812(+) A-I      intronic
chr12:69211274(+) A-I      intronic
chr12:69211757(+) A-I      intronic
chr12:69203916(+) A-I      intronic
chr12:69210402(+) A-I      intronic
chr12:69212611(+) A-I      intronic
chr12:69215301(+) A-I      intronic
chr12:69203906(+) A-I      intronic
chr12:69215352(+) A-I      intronic
chr12:69228062(+) A-I      intronic
chr12:69211334(+) A-I      intronic
chr12:69211836(+) A-I      intronic
chr12:69225633(+) A-I      intronic
chr12:69215343(+) A-I      intronic
chr12:69215050(+) A-I      intronic
chr12:69204015(+) A-I      intronic
chr12:69215288(+) A-I      intronic
chr12:69215356(+) A-I      intronic
chr12:69211848(+) A-I      intronic
chr12:69211444(+) A-I      intronic
chr12:69228352(+) A-I      intronic
chr12:69211289(+) A-I      intronic
chr12:69228136(+) A-I      intronic
chr12:69228261(+) A-I      intronic
chr12:69215436(+) A-I      intronic
chr12:69226489(+) A-I      intronic
chr12:69228071(+) A-I      intronic
chr12:69215088(+) A-I      intronic
chr12:69204807(+) A-I      intronic
chr12:69215811(+) A-I      intronic
chr12:69224610(+) A-I      intronic
chr12:69203945(+) A-I      intronic
chr12:69225846(+) A-I      intronic
chr12:69215087(+) A-I      intronic
chr12:69204702(+) A-I      intronic
chr12:69226558(+) A-I      intronic
chr12:69204664(+) A-I      intronic
chr12:69228012(+) A-I      intronic
chr12:69225739(+) A-I      intronic
chr12:69224647(+) A-I      intronic
chr12:69215351(+) A-I      intronic
chr12:69211418(+) A-I      intronic
chr12:69214993(+) A-I      intronic
chr12:69211678(+) A-I      intronic
chr12:69211310(+) A-I      intronic
chr12:69211774(+) A-I      intronic
chr12:69225699(+) A-I      intronic
chr12:69211748(+) A-I      intronic
chr12:69215396(+) A-I      intronic
chr12:69204381(+) A-I      intronic
chr12:69215737(+) A-I      intronic
chr12:69204010(+) A-I      intronic
chr12:69203905(+) A-I      intronic
chr12:69225698(+) A-I      intronic
chr12:69224545(+) A-I      intronic
chr12:69204423(+) A-I      intronic
chr12:69234841(+) A-I      3'UTR
chr12:69237023(+) A-I      3'UTR
chr12:69234198(+) A-I      3'UTR
chr12:69237020(+) A-I      3'UTR
chr12:69237552(+) A-I      3'UTR
chr12:69238600(+) A-I      3'UTR
chr12:69237627(+) A-I      3'UTR
chr12:69237056(+) A-I      3'UTR
chr12:69237053(+) A-I      3'UTR
chr12:69237529(+) A-I      3'UTR
chr12:69237014(+) A-I      3'UTR
chr12:69234751(+) A-I      3'UTR
chr12:69237507(+) A-I      3'UTR
chr12:69234729(+) A-I      3'UTR
chr12:69237043(+) A-I      3'UTR
chr12:69238627(+) A-I      3'UTR
chr12:69237509(+) A-I      3'UTR
chr12:69237519(+) A-I      3'UTR
chr12:69237073(+) A-I      3'UTR
chr12:69237510(+) A-I      3'UTR
chr12:69237042(+) A-I      3'UTR
chr12:69237475(+) A-I      3'UTR
chr12:69237534(+) A-I      3'UTR
chr12:69234091(+) A-I      3'UTR
chr12:69237021(+) A-I      3'UTR
chr12:69238687(+) A-I      3'UTR
chr12:69237057(+) A-I      3'UTR
chr12:69237007(+) A-I      3'UTR
chr12:69237526(+) A-I      3'UTR
chr12:69237558(+) A-I      3'UTR
chr12:69237648(+) A-I      3'UTR
chr12:69234171(+) A-I      3'UTR
chr12:69237004(+) A-I      3'UTR
chr12:69238651(+) A-I      3'UTR
chr12:69237013(+) A-I      3'UTR
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED MDM2
chr12:69237004(+) A-I exon 3'UTR    19478186   //21960545   //22327324
chr12:69237475(+) A-I exon 3'UTR    15258596
chr12:69237509(+) A-I exon 3'UTR    15258596   //22327324
chr12:69237510(+) A-I exon 3'UTR    15258596   //22327324
chr12:69237519(+) A-I exon 3'UTR    15258596   //21960545
chr12:69203945(+) A-I intron -    22327324
chr12:69211812(+) A-I intron -    22327324
chr12:69214957(+) A-I intron -    22327324
chr12:69214993(+) A-I intron -    22327324
chr12:69215366(+) A-I intron -    22327324
chr12:69215382(+) A-I intron -    21960545   //22327324
chr12:69215760(+) A-I intron -    21960545   //22327324
chr12:69224716(+) A-I intron -    22327324
chr12:69237007(+) A-I intron -    22327324
chr12:69237010(+) A-I intron -    21960545   //22327324
chr12:69237013(+) A-I intron -    21960545   //22327324
chr12:69237014(+) A-I intron -    22327324
chr12:69237020(+) A-I intron -    22327324
chr12:69237021(+) A-I intron -    22327324
chr12:69237042(+) A-I intron -    22327324
chr12:69237053(+) A-I intron -    21960545   //22327324
chr12:69237056(+) A-I intron -    22327324
chr12:69237073(+) A-I intron -    22327324
chr12:69237507(+) A-I intron -    22327324
chr12:69237526(+) A-I intron -    21960545   //22327324
chr12:69237552(+) A-I intron -    22327324
chr12:69215396(+) A-I intron -    21960545
chr12:69237043(+) A-I intron -    21960545
chr12:69237534(+) A-I intron -    21960545
chr12:69215761(+) A-I intron -    21960545
chr12:69237643(+) A-I intron -    21960545
chr12:69237648(+) A-I intron -    21960545
chr12:69203945(+) A-G intron -    22484847
chr12:69211297(+) A-G intron -    22484847
chr12:69211707(+) A-G intron -    22484847
chr12:69211771(+) A-G intron -    22484847
chr12:69211812(+) A-G intron -    22484847
chr12:69214850(+) A-G intron -    22484847
chr12:69214927(+) A-G intron -    22484847
chr12:69214928(+) A-G intron -    22484847
chr12:69214957(+) A-G intron -    22484847
chr12:69214993(+) A-G intron -    22484847
chr12:69215261(+) A-G intron -    22484847
chr12:69215351(+) A-G intron -    22484847
chr12:69215356(+) A-G intron -    22484847
chr12:69215366(+) A-G intron -    22484847
chr12:69215392(+) A-G intron -    22484847
chr12:69215396(+) A-G intron -    22484847
chr12:69215760(+) A-G intron -    22484847
chr12:69215800(+) A-G intron -    22484847
chr12:69223381(+) A-G intron -    22484847
chr12:69224545(+) A-G intron -    22484847
chr12:69224580(+) A-G intron -    22484847
chr12:69224638(+) A-G intron -    22484847
chr12:69224646(+) A-G intron -    22484847
chr12:69224647(+) A-G intron -    22484847
chr12:69224716(+) A-G intron -    22484847
chr12:69225805(+) A-G intron -    22484847
chr12:69226353(+) A-G intron -    22484847
chr12:69226432(+) A-G intron -    22484847
chr12:69226434(+) A-G intron -    22484847
chr12:69226759(+) A-G intron -    22484847
chr12:69234729(+) A-G intron -    22484847
chr12:69237004(+) A-G intron -    22484847
chr12:69237043(+) A-G intron -    22484847
chr12:69237534(+) A-G intron -    22484847
chr12:69203828(+) A-G intron -    22484847
chr12:69203830(+) C-A intron -    22484847
chr12:69203843(+) T-G intron -    22484847
chr12:69203858(+) A-G intron -    22484847
chr12:69203859(+) A-G intron -    22484847
chr12:69203882(+) A-G intron -    22484847
chr12:69203906(+) A-G intron -    22484847
chr12:69203908(+) A-G intron -    22484847
chr12:69203916(+) A-G intron -    22484847
chr12:69203917(+) A-G intron -    22484847
chr12:69203931(+) A-G intron -    22484847
chr12:69203936(+) A-G intron -    22484847
chr12:69203941(+) A-G intron -    22484847
chr12:69203942(+) A-G intron -    22484847
chr12:69203953(+) A-G intron -    22484847
chr12:69203969(+) A-G intron -    22484847
chr12:69203983(+) A-G intron -    22484847
chr12:69203994(+) G-A intron -    22484847
chr12:69204010(+) A-G intron -    22484847
chr12:69204015(+) A-G intron -    22484847
chr12:69204040(+) A-G intron -    22484847
chr12:69204100(+) A-G intron -    22484847
chr12:69204104(+) G-A intron -    22484847
chr12:69204303(+) A-G intron -    22484847
chr12:69204306(+) A-G intron -    22484847
chr12:69204381(+) A-G intron -    22484847
chr12:69204403(+) G-A intron -    22484847
chr12:69204423(+) A-G intron -    22484847
chr12:69204426(+) A-G intron -    22484847
chr12:69204448(+) A-G intron -    22484847
chr12:69204664(+) A-G intron -    22484847
chr12:69204668(+) A-G intron -    22484847
chr12:69204676(+) A-G intron -    22484847
chr12:69204702(+) A-G intron -    22484847
chr12:69204737(+) A-C intron -    22484847
chr12:69204746(+) A-G intron -    22484847
chr12:69204749(+) G-A intron -    22484847
chr12:69204772(+) A-G intron -    22484847
chr12:69204807(+) A-G intron -    22484847
chr12:69204811(+) A-G intron -    22484847
chr12:69204812(+) A-G intron -    22484847
chr12:69204825(+) A-G intron -    22484847
chr12:69205525(+) G-A intron -    22484847
chr12:69205545(+) A-C intron -    22484847
chr12:69205570(+) T-C intron -    22484847
chr12:69205717(+) A-G intron -    22484847
chr12:69207877(+) A-G intron -    22484847
chr12:69208022(+) T-C intron -    22484847
chr12:69209414(+) A-G intron -    22484847
chr12:69209482(+) T-C intron -    22484847
chr12:69210171(+) G-T intron -    22484847
chr12:69210264(+) T-C intron -    22484847
chr12:69210265(+) G-A intron -    22484847
chr12:69210422(+) C-T intron -    22484847
chr12:69211274(+) A-G intron -    22484847
chr12:69211280(+) A-G intron -    22484847
chr12:69211281(+) G-A intron -    22484847
chr12:69211289(+) A-G intron -    22484847
chr12:69211296(+) A-G intron -    22484847
chr12:69211304(+) T-C intron -    22484847
chr12:69211310(+) A-G intron -    22484847
chr12:69211315(+) A-G intron -    22484847
chr12:69211344(+) A-G intron -    22484847
chr12:69211346(+) A-G intron -    22484847
chr12:69211354(+) A-G intron -    22484847
chr12:69211367(+) T-C intron -    22484847
chr12:69211408(+) A-G intron -    22484847
chr12:69211409(+) A-G intron -    22484847
chr12:69211418(+) A-G intron -    22484847
chr12:69211435(+) A-G intron -    22484847
chr12:69211441(+) A-G intron -    22484847
chr12:69211480(+) A-G intron -    22484847
chr12:69211677(+) A-G intron -    22484847
chr12:69211678(+) A-G intron -    22484847
chr12:69211717(+) A-G intron -    22484847
chr12:69211748(+) A-G intron -    22484847
chr12:69211757(+) A-G intron -    22484847
chr12:69211759(+) A-G intron -    22484847
chr12:69211774(+) A-G intron -    22484847
chr12:69211780(+) A-G intron -    22484847
chr12:69211813(+) A-G intron -    22484847
chr12:69211835(+) A-G intron -    22484847
chr12:69211836(+) A-G intron -    22484847
chr12:69211848(+) A-G intron -    22484847
chr12:69212547(+) C-T intron -    22484847
chr12:69212548(+) T-C intron -    22484847
chr12:69212611(+) A-G intron -    22484847
chr12:69213348(+) C-T intron -    22484847
chr12:69213564(+) T-C intron -    22484847
chr12:69214892(+) A-G intron -    22484847
chr12:69214931(+) A-G intron -    22484847
chr12:69214932(+) A-G intron -    22484847
chr12:69214945(+) A-G intron -    22484847
chr12:69214967(+) A-G intron -    22484847
chr12:69214989(+) G-A intron -    22484847
chr12:69215008(+) A-G intron -    22484847
chr12:69215025(+) A-G intron -    22484847
chr12:69215086(+) A-G intron -    22484847
chr12:69215087(+) A-G intron -    22484847
chr12:69215088(+) A-G intron -    22484847
chr12:69215245(+) A-G intron -    22484847
chr12:69215248(+) A-G intron -    22484847
chr12:69215253(+) A-G intron -    22484847
chr12:69215288(+) A-G intron -    22484847
chr12:69215317(+) G-A intron -    22484847
chr12:69215341(+) A-G intron -    22484847
chr12:69215343(+) A-G intron -    22484847
chr12:69215352(+) A-G intron -    22484847
chr12:69215353(+) A-G intron -    22484847
chr12:69215405(+) A-G intron -    22484847
chr12:69215423(+) A-G intron -    22484847
chr12:69215434(+) T-C intron -    22484847
chr12:69215728(+) A-T intron -    22484847
chr12:69215736(+) A-G intron -    22484847
chr12:69215737(+) A-G intron -    22484847
chr12:69215752(+) A-G intron -    22484847
chr12:69215761(+) A-G intron -    22484847
chr12:69215774(+) A-G intron -    22484847
chr12:69215822(+) A-G intron -    22484847
chr12:69215849(+) A-G intron -    22484847
chr12:69215893(+) A-G intron -    22484847
chr12:69215903(+) G-A intron -    22484847
chr12:69216566(+) G-A intron -    22484847
chr12:69216679(+) T-C intron -    22484847
chr12:69216684(+) T-C intron -    22484847
chr12:69216718(+) A-G intron -    22484847
chr12:69218841(+) G-T intron -    22484847
chr12:69218888(+) T-C intron -    22484847
chr12:69218894(+) A-C intron -    22484847
chr12:69218920(+) T-C intron -    22484847
chr12:69220265(+) T-C intron -    22484847
chr12:69220429(+) A-C intron -    22484847
chr12:69220430(+) A-C intron -    22484847
chr12:69220784(+) G-A intron -    22484847
chr12:69220872(+) T-C intron -    22484847
chr12:69221679(+) G-A intron -    22484847
chr12:69222240(+) C-T intron -    22484847
chr12:69223276(+) G-A intron -    22484847
chr12:69223331(+) A-G intron -    22484847
chr12:69223332(+) G-A intron -    22484847
chr12:69223384(+) G-A intron -    22484847
chr12:69223464(+) C-T intron -    22484847
chr12:69224508(+) A-G intron -    22484847
chr12:69224544(+) A-G intron -    22484847
chr12:69224584(+) G-A intron -    22484847
chr12:69224591(+) A-G intron -    22484847
chr12:69224598(+) A-G intron -    22484847
chr12:69224610(+) A-G intron -    22484847
chr12:69224620(+) A-G intron -    22484847
chr12:69224664(+) A-G intron -    22484847
chr12:69224669(+) T-C intron -    22484847
chr12:69224690(+) A-G intron -    22484847
chr12:69224715(+) A-G intron -    22484847
chr12:69224755(+) A-G intron -    22484847
chr12:69225570(+) G-A intron -    22484847
chr12:69225574(+) G-A intron -    22484847
chr12:69225633(+) A-G intron -    22484847
chr12:69225638(+) A-G intron -    22484847
chr12:69225698(+) A-G intron -    22484847
chr12:69225704(+) A-G intron -    22484847
chr12:69225714(+) A-G intron -    22484847
chr12:69225724(+) A-G intron -    22484847
chr12:69225731(+) A-G intron -    22484847
chr12:69225739(+) A-G intron -    22484847
chr12:69225754(+) A-G intron -    22484847
chr12:69225764(+) C-T intron -    22484847
chr12:69225775(+) G-A intron -    22484847
chr12:69225782(+) G-A intron -    22484847
chr12:69225846(+) A-G intron -    22484847
chr12:69226312(+) A-G intron -    22484847
chr12:69226314(+) A-G intron -    22484847
chr12:69226316(+) A-G intron -    22484847
chr12:69226324(+) A-G intron -    22484847
chr12:69226371(+) A-G intron -    22484847
chr12:69226378(+) A-G intron -    22484847
chr12:69226395(+) A-G intron -    22484847
chr12:69226422(+) A-G intron -    22484847
chr12:69226442(+) A-G intron -    22484847
chr12:69226445(+) A-G intron -    22484847
chr12:69226450(+) A-G intron -    22484847
chr12:69226489(+) A-G intron -    22484847
chr12:69226558(+) A-G intron -    22484847
chr12:69226563(+) A-G intron -    22484847
chr12:69228005(+) A-G intron -    22484847
chr12:69228031(+) A-G intron -    22484847
chr12:69228062(+) A-G intron -    22484847
chr12:69228136(+) A-T intron -    22484847
chr12:69228438(+) A-G intron -    22484847
chr12:69230753(+) T-A intron -    22484847
chr12:69230754(+) A-T intron -    22484847
chr12:69231264(+) T-C intron -    22484847
chr12:69231390(+) T-C intron -    22484847
chr12:69233986(+) G-A intron -    22484847
chr12:69234074(+) G-A intron -    22484847
chr12:69234378(+) C-T intron -    22484847
chr12:69234475(+) A-G intron -    22484847
chr12:69234643(+) G-T intron -    22484847
chr12:69234715(+) T-C intron -    22484847
chr12:69234737(+) G-A intron -    22484847
chr12:69234747(+) T-C intron -    22484847
chr12:69234810(+) A-G intron -    22484847
chr12:69234841(+) A-G intron -    22484847
chr12:69234868(+) T-C intron -    22484847
chr12:69235135(+) G-C intron -    22484847
chr12:69238651(+) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase MDM2
chr12:69229736-69229737(+) m6A 3'UTR//CDS//intron       27773535
chr12:69229742-69229743(+) m6A 3'UTR//CDS//intron       27773535
chr12:69233190-69233191(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//27773535//22608085
chr12:69233198-69233199(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//27773535//22608085
chr12:69233245-69233246(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr12:69233330-69233331(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr12:69233407-69233408(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr12:69233414-69233415(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//26404942//22575960//22608085
chr12:69233460-69233461(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//26404942//22575960//22608085
chr12:69233515-69233516(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//26404942//22608085
chr12:69233520-69233521(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//26404942//22608085
chr12:69233589-69233590(+) m6A 3'UTR//CDS       24284625//24981863//26404942//22608085
chr12:69233685-69233686(+) m6A 3'UTR       26404942
chr12:69234645-69234646(+) m6A 3'UTR       -
chr12:69234812-69234813(+) m6A 3'UTR       -
chr12:69235395-69235396(+) m6A 3'UTR       24284625//24981863//22608085
chr12:69235406-69235407(+) m6A 3'UTR       24284625//24981863//22608085
chr12:69235461-69235462(+) m6A 3'UTR       24284625//24981863//22608085
chr12:69235487-69235488(+) m6A 3'UTR       24284625//24981863//22608085
chr12:69235526-69235527(+) m6A 3'UTR       24284625//24981863//22608085
chr12:69235545-69235546(+) m6A 3'UTR       24284625//24981863//22608085
chr12:69235727-69235728(+) m6A 3'UTR       24284625//24209618//24981863//22575960//22608085
chr12:69235793-69235794(+) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr12:69235810-69235811(+) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr12:69235847-69235848(+) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr12:69235941-69235942(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr12:69235954-69235955(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr12:69235972-69235973(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr12:69235989-69235990(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr12:69236016-69236017(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr12:69236034-69236035(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr12:69236051-69236052(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr12:69236072-69236073(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr12:69236147-69236148(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr12:69236222-69236223(+) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//22608085
chr12:69236229-69236230(+) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//22608085
chr12:69236313-69236314(+) m6A 3'UTR//intron       24284625//24981863//22608085
chr12:69236392-69236393(+) m6A 3'UTR//intron       24981863//22608085
chr12:69236429-69236430(+) m6A 3'UTR//intron       24981863//22608085
chr12:69236623-69236624(+) m6A 3'UTR//intron       24981863
chr12:69236661-69236662(+) m6A 3'UTR//intron       24981863
chr12:69236840-69236841(+) Y 3'UTR//intron       26075521
chr12:69237013-69237014(+) m6A 3'UTR//exon//intron       -
chr12:69237034-69237035(+) m6A 3'UTR//exon//intron       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-100-3p
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Fibroblasts|Mesenchymal stem cells     -
MDM2
Chromatin K562 cells     -
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Membrane HCC cell line (HepG2)|K562 cells     -
Nucleoplasm K562 cells     -
Nucleus Human brain microvascular endothelial cells     30419554
Nucleus Nasopharyngeal carcinoma cells     20498841
Nucleus Nasopharyngeal carcinoma cells     20498841
Nucleus Nasopharyngeal carcinoma cells     20498841
Nucleus Nasopharyngeal carcinoma cells     20498841
Nucleus Nasopharyngeal carcinoma cells     20498841
Nucleus HCC cell line (HepG2)|HeLa-S3 cells     -
Ribosome HEK-293 cells     22199352

Related Drug Information:


Resource Symbol Drug Name PubChem ID PMID
NoncoRNA hsa-miR-100-3p
Methyl (9R,10S,11S,12R,19R)-11-acetyloxy-12-ethyl-4-[(13S,15R,17S)-17-ethyl-17-hydroxy-13-methoxycarbonyl-1,11-diazatetracyclo[13.3.1.04,12.05,10]nonadeca-4(12),5,7,9-tetraen-13-yl]-8-formyl-10-hydroxy-5-methoxy-8,16-diazapentacyclo[10.6.1.01,9.02,7.016,19]nonadeca-2,4,6,13-tetraene-10-carboxylate 134755071       26617885

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-100-3p
Interactor2: MDM2

Evidence Support:


Weak-Evidence RNA-Seq
Prediction-Evidence Targetscan
Support Database ViRBase

References:


PMID 31570108 Target region None
Source ViRBase Interactor1 expression None
Tissue or cell line ARPE-19 human RPE cells Interactor2 expression None
Description Table 1 List of miRNAs that were differentially expressed between EBOV- and mock-infected human RPE cells at 24 h post-infection.Putative target genes in EBOV-infected human RPE cells were predicted from the 15 highly differentially expressed miRNAs using algorithms: 2629 targets by Diana microT; 1799 targets by miRDB; and 14315 targets by TargetScan (Additional file 5).

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