Detail Information

Basic Information:


  VIRBase ID:  

HHID00005417

  Virus:  

Zaire ebolavirus (ZEBOV)

  Host:  

Homo sapiens

  Confidence Score:  

0.6002

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-190a-5p:           XKR6:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-190a-5p XKR6
miRBase
Accession/Entrez ID
MIMAT0000458 286046
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - C8orf21//C8orf5//C8orf7//XRG6

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-190a-5p
rs1018706777 chr15:62823984    A/G
rs1369926402 chr15:62823991    G/A
rs1555521311 chr15:62823990    G/C
rs755866868 chr15:62823986    A/G
rs766742872 chr15:62823990    GGTT/G
rs777464613 chr15:62823987    T/G
rs1228899174 chr15:62823974    T/A
rs1281303771 chr15:62823976    T/C
rs1350000299 chr15:62823972    G/A

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR XKR6
chr8:10964297(-) A-I      intronic
chr8:11029479(-) A-I      intronic
chr8:10984608(-) A-I      intronic
chr8:10974060(-) A-I      intronic
chr8:10866762(-) A-I      intronic
chr8:10968443(-) A-I      intronic
chr8:10968495(-) A-I      intronic
chr8:10968479(-) A-I      intronic
chr8:10968475(-) A-I      intronic
chr8:10968444(-) A-I      intronic
chr8:10964353(-) A-I      intronic
chr8:10968377(-) A-I      intronic
chr8:10964251(-) A-I      intronic
chr8:10968399(-) A-I      intronic
chr8:10964193(-) A-I      intronic
chr8:10964179(-) A-I      intronic
chr8:10968376(-) A-I      intronic
chr8:10964174(-) A-I      intronic
chr8:10964167(-) A-I      intronic
chr8:10964114(-) A-I      intronic
chr8:10967535(-) A-I      intronic
chr8:10964303(-) A-I      intronic
chr8:10986110(-) A-I      intronic
chr8:10964241(-) A-I      intronic
chr8:10964228(-) A-I      intronic
chr8:10964216(-) A-I      intronic
chr8:10902801(-) A-I      intronic
chr8:10902766(-) A-I      intronic
chr8:10902761(-) A-I      intronic
chr8:10902757(-) A-I      intronic
chr8:10947687(-) A-I      intronic
chr8:10947624(-) A-I      intronic
chr8:10946973(-) A-I      intronic
chr8:10937464(-) A-I      intronic
chr8:10937452(-) A-I      intronic
chr8:11050015(-) A-I      intronic
chr8:10937355(-) A-I      intronic
chr8:10973973(-) A-I      intronic
chr8:10984604(-) A-I      intronic
chr8:10848552(-) A-I      intronic
chr8:10984602(-) A-I      intronic
chr8:10967555(-) A-I      intronic
chr8:10940076(-) A-I      intronic
chr8:11029382(-) A-I      intronic
chr8:10938364(-) A-I      intronic
chr8:11029317(-) A-I      intronic
chr8:10986131(-) A-I      intronic
chr8:10866849(-) A-I      intronic
chr8:11029305(-) A-I      intronic
chr8:10896229(-) A-I      intronic
chr8:10902672(-) A-I      intronic
chr8:10867006(-) A-I      intronic
chr8:10973997(-) A-I      intronic
chr8:10974005(-) A-I      intronic
chr8:10974051(-) A-I      intronic
chr8:10902799(-) A-I      intronic
chr8:10974056(-) A-I      intronic
chr8:10974170(-) A-I      intronic
chr8:10980564(-) A-I      intronic
chr8:10980607(-) A-I      intronic
chr8:10980647(-) A-I      intronic
chr8:10980701(-) A-I      intronic
chr8:10980703(-) A-I      intronic
chr8:10982352(-) A-I      intronic
chr8:10982427(-) A-I      intronic
chr8:10982477(-) A-I      intronic
chr8:10982487(-) A-I      intronic
chr8:10982512(-) A-I      intronic
chr8:10982530(-) A-I      intronic
chr8:10982552(-) A-I      intronic
chr8:10992610(-) A-I      intronic
chr8:10848538(-) A-I      intronic
chr8:11029523(-) A-I      intronic
chr8:10992619(-) A-I      intronic
chr8:10992757(-) A-I      intronic
chr8:10992760(-) A-I      intronic
chr8:10993854(-) A-I      intronic
chr8:10902811(-) A-I      intronic
chr8:10951989(-) A-I      intronic
chr8:10950663(-) A-I      intronic
chr8:10964357(-) A-I      intronic
chr8:10993886(-) A-I      intronic
chr8:10928842(-) A-I      intronic
chr8:10895219(-) A-I      intronic
chr8:10895402(-) A-I      intronic
chr8:10928812(-) A-I      intronic
chr8:10918876(-) A-I      intronic
chr8:10895425(-) A-I      intronic
chr8:10918854(-) A-I      intronic
chr8:10903747(-) A-I      intronic
chr8:10998286(-) A-I      intronic
chr8:10903744(-) A-I      intronic
chr8:10998296(-) A-I      intronic
chr8:10998348(-) A-I      intronic
chr8:10902887(-) A-I      intronic
chr8:10895477(-) A-I      intronic
chr8:10998367(-) A-I      intronic
chr8:11038170(-) A-I      intronic
chr8:11038292(-) A-I      intronic
chr8:10902816(-) A-I      intronic
chr8:11005557(-) A-I      intronic
chr8:10968530(-) A-I      intronic
chr8:11005684(-) A-I      intronic
chr8:11022675(-) A-I      intronic
chr8:11037591(-) A-I      intronic
chr8:11022677(-) A-I      intronic
chr8:10950559(-) A-I      intronic
chr8:11022742(-) A-I      intronic
chr8:11037586(-) A-I      intronic
chr8:11022899(-) A-I      intronic
chr8:11024167(-) A-I      intronic
chr8:11037579(-) A-I      intronic
chr8:11049838(-) A-I      intronic
chr8:10896173(-) A-I      intronic
chr8:11024174(-) A-I      intronic
chr8:11024193(-) A-I      intronic
chr8:11037572(-) A-I      intronic
chr8:11037565(-) A-I      intronic
chr8:11024226(-) A-I      intronic
chr8:11024250(-) A-I      intronic
chr8:11037548(-) A-I      intronic
chr8:11024258(-) A-I      intronic
chr8:10968653(-) A-I      intronic
chr8:10980665(-) A-I      intronic
chr8:11024283(-) A-I      intronic
chr8:11022803(-) A-I      intronic
chr8:11022786(-) A-I      intronic
chr8:11022781(-) A-I      intronic
chr8:11037539(-) A-I      intronic
chr8:11037536(-) A-I      intronic
chr8:11037437(-) A-I      intronic
chr8:11024285(-) A-I      intronic
chr8:11030619(-) A-I      intronic
chr8:11030610(-) A-I      intronic
chr8:11029779(-) A-I      intronic
chr8:10896176(-) A-I      intronic
chr8:11022780(-) A-I      intronic
chr8:11024338(-) A-I      intronic
chr8:11024276(-) A-I      intronic
chr8:10896177(-) A-I      intronic
chr8:10896213(-) A-I      intronic
chr8:10896218(-) A-I      intronic
chr8:11029662(-) A-I      intronic
chr8:11022774(-) A-I      intronic
chr8:11022754(-) A-I      intronic
chr8:11049609(-) A-I      intronic
chr8:10968565(-) A-I      intronic
chr8:10893678(-) A-I      intronic
chr8:11029529(-) A-I      intronic
chr8:11029784(-) A-I      intronic
chr8:11036636(-) A-I      intronic
chr8:10895454(-) A-I      intronic
chr8:11050012(-) A-I      intronic
chr8:10964141(-) A-I      intronic
chr8:10896250(-) A-I      intronic
chr8:10989929(-) A-I      intronic
chr8:10955234(-) A-I      intronic
chr8:10894851(-) A-I      intronic
chr8:11049680(-) A-I      intronic
chr8:10980490(-) A-I      intronic
chr8:11029722(-) A-I      intronic
chr8:10980502(-) A-I      intronic
chr8:10902307(-) A-I      intronic
chr8:10983675(-) A-I      intronic
chr8:10902338(-) A-I      intronic
chr8:11029405(-) A-I      intronic
chr8:10947854(-) A-I      intronic
chr8:10861847(-) A-I      intronic
chr8:11049908(-) A-I      intronic
chr8:10964238(-) A-I      intronic
chr8:10992820(-) A-I      intronic
chr8:11036590(-) A-I      intronic
chr8:11037580(-) A-I      intronic
chr8:10947801(-) A-I      intronic
chr8:11015151(-) A-I      intronic
chr8:10973953(-) A-I      intronic
chr8:10947022(-) A-I      intronic
chr8:10863439(-) A-I      intronic
chr8:10823935(-) A-I      intronic
chr8:10903834(-) A-I      intronic
chr8:11005090(-) A-I      intronic
chr8:10902873(-) A-I      intronic
chr8:10848366(-) A-I      intronic
chr8:10812963(-) A-I      intronic
chr8:11036630(-) A-I      intronic
chr8:10903847(-) A-I      intronic
chr8:10903724(-) A-I      intronic
chr8:10895285(-) A-I      intronic
chr8:10902331(-) A-I      intronic
chr8:11029677(-) A-I      intronic
chr8:11036391(-) A-I      intronic
chr8:10951422(-) A-I      intronic
chr8:11023663(-) A-I      intronic
chr8:10964236(-) A-I      intronic
chr8:10947623(-) A-I      intronic
chr8:10964129(-) A-I      intronic
chr8:10980700(-) A-I      intronic
chr8:11053364(-) A-I      intronic
chr8:10993808(-) A-I      intronic
chr8:11047603(-) A-I      intronic
chr8:10980581(-) A-I      intronic
chr8:11038294(-) A-I      intronic
chr8:11023640(-) A-I      intronic
chr8:10903726(-) A-I      intronic
chr8:10990089(-) A-I      intronic
chr8:10863492(-) A-I      intronic
chr8:10980542(-) A-I      intronic
chr8:11038316(-) A-I      intronic
chr8:10983682(-) A-I      intronic
chr8:10964096(-) A-I      intronic
chr8:11038409(-) A-I      intronic
chr8:10896142(-) A-I      intronic
chr8:10934421(-) A-I      intronic
chr8:10980664(-) A-I      intronic
chr8:11050055(-) A-I      intronic
chr8:11039459(-) A-I      intronic
chr8:10967550(-) A-I      intronic
chr8:10902724(-) A-I      intronic
chr8:10980503(-) A-I      intronic
chr8:10964325(-) A-I      intronic
chr8:10896228(-) A-I      intronic
chr8:11022880(-) A-I      intronic
chr8:11036490(-) A-I      intronic
chr8:10964100(-) A-I      intronic
chr8:10848339(-) A-I      intronic
chr8:10967679(-) A-I      intronic
chr8:11015190(-) A-I      intronic
chr8:11042244(-) A-I      intronic
chr8:10946975(-) A-I      intronic
chr8:11029817(-) A-I      intronic
chr8:10993839(-) A-I      intronic
chr8:11038267(-) A-I      intronic
chr8:11022747(-) A-I      intronic
chr8:11037643(-) A-I      intronic
chr8:10814734(-) A-I      intronic
chr8:10980584(-) A-I      intronic
chr8:11029327(-) A-I      intronic
chr8:10951298(-) A-I      intronic
chr8:10964211(-) A-I      intronic
chr8:11037585(-) A-I      intronic
chr8:10968636(-) A-I      intronic
chr8:11008268(-) A-I      intronic
chr8:11029803(-) A-I      intronic
chr8:11049779(-) A-I      intronic
chr8:11049816(-) A-I      intronic
chr8:10964248(-) A-I      intronic
chr8:10947047(-) A-I      intronic
chr8:10866044(-) A-I      intronic
chr8:10902806(-) A-I      intronic
chr8:10993902(-) A-I      intronic
chr8:10964212(-) A-I      intronic
chr8:11024149(-) A-I      intronic
chr8:11044014(-) A-I      intronic
chr8:11036579(-) A-I      intronic
chr8:11039408(-) A-I      intronic
chr8:11004063(-) A-I      intronic
chr8:10951899(-) A-I      intronic
chr8:10973949(-) A-I      intronic
chr8:11024260(-) A-I      intronic
chr8:10974057(-) A-I      intronic
chr8:10896087(-) A-I      intronic
chr8:11041064(-) A-I      intronic
chr8:10863457(-) A-I      intronic
chr8:10964347(-) A-I      intronic
chr8:10990010(-) A-I      intronic
chr8:11003901(-) A-I      intronic
chr8:11023528(-) A-I      intronic
chr8:11022863(-) A-I      intronic
chr8:11038416(-) A-I      intronic
chr8:11050110(-) A-I      intronic
chr8:10950662(-) A-I      intronic
chr8:10946930(-) A-I      intronic
chr8:11036417(-) A-I      intronic
chr8:11024219(-) A-I      intronic
chr8:10948839(-) A-I      intronic
chr8:10951903(-) A-I      intronic
chr8:11036449(-) A-I      intronic
chr8:10946890(-) A-I      intronic
chr8:10957832(-) A-I      intronic
chr8:11029829(-) A-I      intronic
chr8:10964142(-) A-I      intronic
chr8:11029447(-) A-I      intronic
chr8:11038209(-) A-I      intronic
chr8:10967621(-) A-I      intronic
chr8:11039526(-) A-I      intronic
chr8:10902154(-) A-I      intronic
chr8:10964308(-) A-I      intronic
chr8:10866776(-) A-I      intronic
chr8:10964124(-) A-I      intronic
chr8:10866777(-) A-I      intronic
chr8:11036480(-) A-I      intronic
chr8:10964278(-) A-I      intronic
chr8:11040991(-) A-I      intronic
chr8:11036546(-) A-I      intronic
chr8:11036428(-) A-I      intronic
chr8:11040932(-) A-I      intronic
chr8:11036582(-) A-I      intronic
chr8:10863408(-) A-I      intronic
chr8:10950802(-) A-I      intronic
chr8:10902171(-) A-I      intronic
chr8:11004027(-) A-I      intronic
chr8:11050062(-) A-I      intronic
chr8:11038169(-) A-I      intronic
chr8:10863486(-) A-I      intronic
chr8:10903706(-) A-I      intronic
chr8:10951788(-) A-I      intronic
chr8:11029731(-) A-I      intronic
chr8:10894864(-) A-I      intronic
chr8:10982405(-) A-I      intronic
chr8:11029847(-) A-I      intronic
chr8:11023581(-) A-I      intronic
chr8:11041104(-) A-I      intronic
chr8:10964354(-) A-I      intronic
chr8:10948872(-) A-I      intronic
chr8:11041048(-) A-I      intronic
chr8:10982360(-) A-I      intronic
chr8:11050025(-) A-I      intronic
chr8:10967778(-) A-I      intronic
chr8:11029755(-) A-I      intronic
chr8:10899040(-) A-I      intronic
chr8:11008280(-) A-I      intronic
chr8:10902735(-) A-I      intronic
chr8:10848525(-) A-I      intronic
chr8:10964277(-) A-I      intronic
chr8:10968637(-) A-I      intronic
chr8:10971968(-) A-I      intronic
chr8:10983716(-) A-I      intronic
chr8:10964202(-) A-I      intronic
chr8:10964335(-) A-I      intronic
chr8:11024220(-) A-I      intronic
chr8:10957821(-) A-I      intronic
chr8:10903828(-) A-I      intronic
chr8:10893666(-) A-I      intronic
chr8:11037596(-) A-I      intronic
chr8:11038375(-) A-I      intronic
chr8:10842528(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED XKR6
chr8:10962747(-) A-I intron -    15342557
chr8:10962800(-) A-I intron -    15342557
chr8:10964100(-) A-I intron -    15342557
chr8:10964102(-) A-I intron -    15342557
chr8:10964115(-) A-I intron -    15342557
chr8:10964124(-) A-I intron -    15342557   //22327324
chr8:10964129(-) A-I intron -    15342557
chr8:10964141(-) A-I intron -    15342557   //15258596
chr8:10964142(-) A-I intron -    15342557   //15258596
chr8:10964147(-) A-I intron -    15342557   //15258596
chr8:10964196(-) A-I intron -    15342557
chr8:10964212(-) A-I intron -    15342557   //22327324
chr8:10964096(-) A-I intron -    22327324
chr8:10964325(-) A-I intron -    22327324
chr8:10964335(-) A-I intron -    22327324
chr8:10964752(-) A-I intron -    22327324
chr8:10964825(-) A-I intron -    21960545   //22327324
chr8:10964848(-) A-I intron -    22327324
chr8:10964941(-) A-I intron -    21960545   //22327324
chr8:10964970(-) A-I intron -    22327324
chr8:10984558(-) A-I intron -    22327324
chr8:10984585(-) A-I intron -    22327324
chr8:10984590(-) A-I intron -    22327324
chr8:10984654(-) A-I intron -    22327324
chr8:11036490(-) A-I intron -    22327324
chr8:10964882(-) A-I intron -    21960545
chr8:10984558(-) A-G intron -    22484847
chr8:10986117(-) A-G intron -    22484847
chr8:10986122(-) A-G intron -    22484847
chr8:11001335(-) A-G intron -    22484847
chr8:11001404(-) A-G intron -    22484847
chr8:11006008(-) A-G intron -    22484847
chr8:11017171(-) A-G intron -    22484847
chr8:10842528(-) A-G intron -    22484847
chr8:10866776(-) A-G intron -    22484847
chr8:10866777(-) A-G intron -    22484847
chr8:10895259(-) A-G intron -    22484847
chr8:10895260(-) A-G intron -    22484847
chr8:10895454(-) A-G intron -    22484847
chr8:10896087(-) A-G intron -    22484847
chr8:10896105(-) A-G intron -    22484847
chr8:10896169(-) A-G intron -    22484847
chr8:10902331(-) A-G intron -    22484847
chr8:10903706(-) A-G intron -    22484847
chr8:10903724(-) A-G intron -    22484847
chr8:10903726(-) A-G intron -    22484847
chr8:10903827(-) A-G intron -    22484847
chr8:10903828(-) A-G intron -    22484847
chr8:10903834(-) A-G intron -    22484847
chr8:10946930(-) A-G intron -    22484847
chr8:10947022(-) A-G intron -    22484847
chr8:10947047(-) A-G intron -    22484847
chr8:10947723(-) A-G intron -    22484847
chr8:10947733(-) A-G intron -    22484847
chr8:10948839(-) A-G intron -    22484847
chr8:10948848(-) A-G intron -    22484847
chr8:10948872(-) A-G intron -    22484847
chr8:10957821(-) A-G intron -    22484847
chr8:10957832(-) A-G intron -    22484847
chr8:10964096(-) A-G intron -    22484847
chr8:10964102(-) A-G intron -    22484847
chr8:10964115(-) A-G intron -    22484847
chr8:10964124(-) A-G intron -    22484847
chr8:10964129(-) A-G intron -    22484847
chr8:10964202(-) A-G intron -    22484847
chr8:10964211(-) A-G intron -    22484847
chr8:10964212(-) A-G intron -    22484847
chr8:10964236(-) A-G intron -    22484847
chr8:10964238(-) A-G intron -    22484847
chr8:10964248(-) A-G intron -    22484847
chr8:10964277(-) A-G intron -    22484847
chr8:10964278(-) A-G intron -    22484847
chr8:10964308(-) A-G intron -    22484847
chr8:10964325(-) A-G intron -    22484847
chr8:10964335(-) A-G intron -    22484847
chr8:10964752(-) A-G intron -    22484847
chr8:10964825(-) A-G intron -    22484847
chr8:10964833(-) A-G intron -    22484847
chr8:10964848(-) A-G intron -    22484847
chr8:10964874(-) A-G intron -    22484847
chr8:10964877(-) A-G intron -    22484847
chr8:10964878(-) A-G intron -    22484847
chr8:10964882(-) A-G intron -    22484847
chr8:10964883(-) A-G intron -    22484847
chr8:10964941(-) A-G intron -    22484847
chr8:10964967(-) A-G intron -    22484847
chr8:10964970(-) A-G intron -    22484847
chr8:10967550(-) A-G intron -    22484847
chr8:10967556(-) A-G intron -    22484847
chr8:10968485(-) A-G intron -    22484847
chr8:10972057(-) G-C intron -    22484847
chr8:10973949(-) A-G intron -    22484847
chr8:10973953(-) A-G intron -    22484847
chr8:10980503(-) A-G intron -    22484847
chr8:10980584(-) A-G intron -    22484847
chr8:10980635(-) A-G intron -    22484847
chr8:10980660(-) A-G intron -    22484847
chr8:10980664(-) A-G intron -    22484847
chr8:10980700(-) A-G intron -    22484847
chr8:10982360(-) A-G intron -    22484847
chr8:10982405(-) A-G intron -    22484847
chr8:10983675(-) A-G intron -    22484847
chr8:10983682(-) A-G intron -    22484847
chr8:10983777(-) A-G intron -    22484847
chr8:10983779(-) A-G intron -    22484847
chr8:10990009(-) A-G intron -    22484847
chr8:10990010(-) A-G intron -    22484847
chr8:10993768(-) A-G intron -    22484847
chr8:10993839(-) A-G intron -    22484847
chr8:10993850(-) A-G intron -    22484847
chr8:10998407(-) G-T intron -    22484847
chr8:11004109(-) A-T intron -    22484847
chr8:11005083(-) A-G intron -    22484847
chr8:11005090(-) A-G intron -    22484847
chr8:11022738(-) A-G intron -    22484847
chr8:11022747(-) A-G intron -    22484847
chr8:11022863(-) A-G intron -    22484847
chr8:11023528(-) A-G intron -    22484847
chr8:11023558(-) A-G intron -    22484847
chr8:11023581(-) A-G intron -    22484847
chr8:11023631(-) A-G intron -    22484847
chr8:11024149(-) A-G intron -    22484847
chr8:11024175(-) T-C intron -    22484847
chr8:11024210(-) A-G intron -    22484847
chr8:11024219(-) A-G intron -    22484847
chr8:11024220(-) A-G intron -    22484847
chr8:11024260(-) A-G intron -    22484847
chr8:11029327(-) A-G intron -    22484847
chr8:11029405(-) A-G intron -    22484847
chr8:11029416(-) C-G intron -    22484847
chr8:11029440(-) A-G intron -    22484847
chr8:11029447(-) A-G intron -    22484847
chr8:11029677(-) A-G intron -    22484847
chr8:11029722(-) A-G intron -    22484847
chr8:11029755(-) A-G intron -    22484847
chr8:11029784(-) A-G intron -    22484847
chr8:11029817(-) A-G intron -    22484847
chr8:11029847(-) A-G intron -    22484847
chr8:11036424(-) A-G intron -    22484847
chr8:11036428(-) A-G intron -    22484847
chr8:11036449(-) A-G intron -    22484847
chr8:11036454(-) A-G intron -    22484847
chr8:11036459(-) A-G intron -    22484847
chr8:11036480(-) A-G intron -    22484847
chr8:11036490(-) A-G intron -    22484847
chr8:11036590(-) A-G intron -    22484847
chr8:11036609(-) A-G intron -    22484847
chr8:11037562(-) A-G intron -    22484847
chr8:11037564(-) A-G intron -    22484847
chr8:11037566(-) A-G intron -    22484847
chr8:11037580(-) A-G intron -    22484847
chr8:11037585(-) A-G intron -    22484847
chr8:11037635(-) A-G intron -    22484847
chr8:11037643(-) A-G intron -    22484847
chr8:11038169(-) A-G intron -    22484847
chr8:11038209(-) A-G intron -    22484847
chr8:11038267(-) A-G intron -    22484847
chr8:11038294(-) A-G intron -    22484847
chr8:11038375(-) A-G intron -    22484847
chr8:11038409(-) A-G intron -    22484847
chr8:11038416(-) A-G intron -    22484847
chr8:11039459(-) A-G intron -    22484847
chr8:11039526(-) A-G intron -    22484847
chr8:11040932(-) A-G intron -    22484847
chr8:11041064(-) A-G intron -    22484847
chr8:11041104(-) A-G intron -    22484847
chr8:11047476(-) T-C intron -    22484847
chr8:11047603(-) A-G intron -    22484847
chr8:11049764(-) A-G intron -    22484847
chr8:11049816(-) A-G intron -    22484847
chr8:11049832(-) A-G intron -    22484847
chr8:11050012(-) A-G intron -    22484847
chr8:11050038(-) A-G intron -    22484847
chr8:11050062(-) A-G intron -    22484847
chr8:11050110(-) A-G intron -    22484847
chr8:11053364(-) A-G intron -    22484847
chr8:10984590(-) A-G intron -    22484847
chr8:10984599(-) A-G intron -    22484847
chr8:10984654(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase XKR6
chr8:10753865-10753866(-) m6A 3'UTR       25456834
chr8:10753882-10753883(-) m6A 3'UTR       25456834
chr8:10753982-10753983(-) m6A 3'UTR       25456834
chr8:10753997-10753998(-) m6A 3'UTR       25456834
chr8:10755433-10755434(-) m6A 3'UTR       22608085
chr8:10755503-10755504(-) m6A CDS       25456834//24981863//22608085
chr8:10755562-10755563(-) m6A CDS       25456834//24981863//22608085
chr8:10755579-10755580(-) m6A CDS       25456834//24981863//22608085
chr8:10755689-10755690(-) m6A CDS       22608085
chr8:10755985-10755986(-) m6A CDS       22608085
chr8:10755993-10755994(-) m6A CDS       22608085
chr8:10756075-10756076(-) m6A CDS       22608085
chr8:10756171-10756172(-) m6A CDS       22608085
chr8:10962824-10962825(-) m6A intron       25456834
chr8:10962861-10962862(-) m6A intron       25456834
chr8:10962872-10962873(-) m6A intron       25456834
chr8:10962977-10962978(-) m6A intron       25456834
chr8:10963023-10963024(-) m6A intron       25456834
chr8:10963904-10963905(-) m6A intron       25456834
chr8:10963931-10963932(-) m6A intron       25456834
chr8:10965339-10965340(-) m6A intron       22608085
chr8:10965369-10965370(-) m6A intron       22608085
chr8:10965398-10965399(-) m6A intron       22608085
chr8:10965487-10965488(-) m6A intron       24981863//22608085
chr8:10965501-10965502(-) m6A intron       24981863//22608085
chr8:10965565-10965566(-) m6A intron       24981863//22608085
chr8:10965680-10965681(-) m6A intron       22608085
chr8:10966125-10966126(-) m6A intron       25456834//24981863//22608085
chr8:10966167-10966168(-) m6A intron       25456834//24981863//22608085
chr8:10966333-10966334(-) m6A intron       22608085
chr8:10966368-10966369(-) m6A intron       25456834//22608085
chr8:10966377-10966378(-) m6A intron       25456834//22608085
chr8:10966427-10966428(-) m6A intron       22608085
chr8:10966458-10966459(-) m6A intron       22608085
chr8:10966482-10966483(-) m6A intron       22608085
chr8:11058288-11058289(-) m6A CDS       25456834//22608085
chr8:11058375-11058376(-) m6A CDS       25456834//24981863//27371828//27773536//22608085
chr8:11058573-11058574(-) m6A CDS       27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-190a-5p
Exosome Hepatocellular carcinoma cell line (HepG2)|Lung epithelial carcinoma cell line (A549)     20615901
Exosome Brain tissue     23382797
Exosome Plasma     23663360
Exosome Plasma     24683445
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Hepatocellular carcinoma cell line (HepG2)|Lung epithelial carcinoma cell line (A549)     20615901
Microvesicle Colon cancer cell line (LIM1863)|Mesenchymal stem cells|Urine     -
XKR6
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-190a-5p
Interactor2: XKR6

Evidence Support:


Weak-Evidence RNA-Seq
Prediction-Evidence DIANA-microT//miRDB//Targetscan
Support Database ViRBase

References:


PMID 31570108 Target region None
Source ViRBase Interactor1 expression None
Tissue or cell line ARPE-19 human RPE cells Interactor2 expression None
Description Table 1 List of miRNAs that were differentially expressed between EBOV- and mock-infected human RPE cells at 24 h post-infection.Putative target genes in EBOV-infected human RPE cells were predicted from the 15 highly differentially expressed miRNAs using algorithms: 2629 targets by Diana microT; 1799 targets by miRDB; and 14315 targets by TargetScan (Additional file 5).

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