Detail Information

Basic Information:


  VIRBase ID:  

HHID00005280

  Virus:  

Zaire ebolavirus (ZEBOV)

  Host:  

Homo sapiens

  Confidence Score:  

0.6002

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-190a-5p:           RC3H1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-190a-5p RC3H1
miRBase
Accession/Entrez ID
MIMAT0000458 149041
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - FHL6//IMDSHY//RNF198//ROQUIN

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-190a-5p
rs1018706777 chr15:62823984    A/G
rs1369926402 chr15:62823991    G/A
rs1555521311 chr15:62823990    G/C
rs755866868 chr15:62823986    A/G
rs766742872 chr15:62823990    GGTT/G
rs777464613 chr15:62823987    T/G
rs1228899174 chr15:62823974    T/A
rs1281303771 chr15:62823976    T/C
rs1350000299 chr15:62823972    G/A

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR RC3H1
chr1:173914365(-) A-I      intronic
chr1:173908756(-) A-I      intronic
chr1:173908769(-) A-I      intronic
chr1:173908807(-) A-I      intronic
chr1:173908810(-) A-I      intronic
chr1:173928809(-) A-I      intronic
chr1:173928801(-) A-I      intronic
chr1:173972362(-) A-I      intronic
chr1:173970754(-) A-I      intronic
chr1:173928797(-) A-I      intronic
chr1:173928787(-) A-I      intronic
chr1:173928781(-) A-I      intronic
chr1:173928746(-) A-I      intronic
chr1:173928743(-) A-I      intronic
chr1:173908749(-) A-I      intronic
chr1:173915018(-) A-I      intronic
chr1:173928814(-) A-I      intronic
chr1:173963325(-) A-I      intronic
chr1:173963347(-) A-I      intronic
chr1:173963528(-) A-I      intronic
chr1:173963702(-) A-I      intronic
chr1:173963734(-) A-I      intronic
chr1:173963806(-) A-I      intronic
chr1:173967963(-) A-I      intronic
chr1:173968039(-) A-I      intronic
chr1:173970651(-) A-I      intronic
chr1:173970690(-) A-I      intronic
chr1:173970735(-) A-I      intronic
chr1:173970742(-) A-I      intronic
chr1:173970753(-) A-I      intronic
chr1:173970840(-) A-I      intronic
chr1:173970842(-) A-I      intronic
chr1:173972342(-) A-I      intronic
chr1:173972368(-) A-I      intronic
chr1:173972400(-) A-I      intronic
chr1:173972425(-) A-I      intronic
chr1:173972856(-) A-I      intronic
chr1:173972964(-) A-I      intronic
chr1:173973002(-) A-I      intronic
chr1:173973004(-) A-I      intronic
chr1:173975161(-) A-I      intronic
chr1:173975178(-) A-I      intronic
chr1:173975181(-) A-I      intronic
chr1:173975217(-) A-I      intronic
chr1:173975221(-) A-I      intronic
chr1:173975245(-) A-I      intronic
chr1:173975293(-) A-I      intronic
chr1:173975361(-) A-I      intronic
chr1:173976269(-) A-I      intronic
chr1:173976284(-) A-I      intronic
chr1:173976416(-) A-I      intronic
chr1:173976428(-) A-I      intronic
chr1:173976495(-) A-I      intronic
chr1:173976635(-) A-I      intronic
chr1:173976694(-) A-I      intronic
chr1:173976740(-) A-I      intronic
chr1:173976782(-) A-I      intronic
chr1:173978759(-) A-I      intronic
chr1:173978766(-) A-I      intronic
chr1:173978772(-) A-I      intronic
chr1:173978832(-) A-I      intronic
chr1:173978868(-) A-I      intronic
chr1:173978876(-) A-I      intronic
chr1:173978945(-) A-I      intronic
chr1:173981264(-) A-I      intronic
chr1:173981774(-) A-I      intronic
chr1:173981798(-) A-I      intronic
chr1:173981800(-) A-I      intronic
chr1:173981859(-) A-I      intronic
chr1:173982775(-) A-I      intronic
chr1:173982862(-) A-I      intronic
chr1:173982865(-) A-I      intronic
chr1:173984618(-) A-I      intronic
chr1:173984641(-) A-I      intronic
chr1:173984775(-) A-I      intronic
chr1:173984880(-) A-I      intronic
chr1:173984928(-) A-I      intronic
chr1:173984938(-) A-I      intronic
chr1:173985628(-) A-I      intronic
chr1:173909526(-) A-I      intronic
chr1:173908450(-) A-I      intronic
chr1:173908504(-) A-I      intronic
chr1:173908510(-) A-I      intronic
chr1:173909438(-) A-I      intronic
chr1:173909444(-) A-I      intronic
chr1:173909447(-) A-I      intronic
chr1:173909461(-) A-I      intronic
chr1:173910062(-) A-I      intronic
chr1:173910187(-) A-I      intronic
chr1:173910229(-) A-I      intronic
chr1:173911873(-) A-I      intronic
chr1:173913040(-) A-I      intronic
chr1:173913067(-) A-I      intronic
chr1:173914303(-) A-I      intronic
chr1:173914396(-) A-I      intronic
chr1:173914557(-) A-I      intronic
chr1:173914978(-) A-I      intronic
chr1:173914983(-) A-I      intronic
chr1:173915002(-) A-I      intronic
chr1:173915090(-) A-I      intronic
chr1:173915163(-) A-I      intronic
chr1:173915221(-) A-I      intronic
chr1:173915250(-) A-I      intronic
chr1:173917009(-) A-I      intronic
chr1:173917160(-) A-I      intronic
chr1:173918583(-) A-I      intronic
chr1:173918618(-) A-I      intronic
chr1:173919977(-) A-I      intronic
chr1:173920050(-) A-I      intronic
chr1:173920052(-) A-I      intronic
chr1:173920057(-) A-I      intronic
chr1:173920058(-) A-I      intronic
chr1:173920098(-) A-I      intronic
chr1:173920341(-) A-I      intronic
chr1:173922933(-) A-I      intronic
chr1:173922941(-) A-I      intronic
chr1:173922960(-) A-I      intronic
chr1:173925200(-) A-I      intronic
chr1:173925206(-) A-I      intronic
chr1:173925238(-) A-I      intronic
chr1:173925714(-) A-I      intronic
chr1:173925733(-) A-I      intronic
chr1:173925758(-) A-I      intronic
chr1:173926180(-) A-I      intronic
chr1:173926189(-) A-I      intronic
chr1:173926190(-) A-I      intronic
chr1:173926221(-) A-I      intronic
chr1:173926899(-) A-I      intronic
chr1:173926956(-) A-I      intronic
chr1:173926971(-) A-I      intronic
chr1:173934607(-) A-I      intronic
chr1:173934617(-) A-I      intronic
chr1:173934646(-) A-I      intronic
chr1:173935099(-) A-I      intronic
chr1:173936375(-) A-I      intronic
chr1:173943226(-) A-I      intronic
chr1:173945406(-) A-I      intronic
chr1:173946157(-) A-I      intronic
chr1:173946199(-) A-I      intronic
chr1:173946268(-) A-I      intronic
chr1:173946291(-) A-I      intronic
chr1:173946299(-) A-I      intronic
chr1:173948541(-) A-I      intronic
chr1:173948551(-) A-I      intronic
chr1:173948788(-) A-I      intronic
chr1:173949113(-) A-I      intronic
chr1:173955269(-) A-I      intronic
chr1:173959366(-) A-I      intronic
chr1:173959506(-) A-I      intronic
chr1:173959920(-) A-I      intronic
chr1:173960004(-) A-I      intronic
chr1:173960236(-) A-I      intronic
chr1:173960330(-) A-I      intronic
chr1:173962734(-) A-I      intronic
chr1:173962798(-) A-I      intronic
chr1:173962810(-) A-I      intronic
chr1:173938165(-) A-I      intronic
chr1:173949108(-) A-I      intronic
chr1:173915244(-) A-I      intronic
chr1:173948711(-) A-I      intronic
chr1:173972401(-) A-I      intronic
chr1:173982774(-) A-I      intronic
chr1:173960012(-) A-I      intronic
chr1:173979681(-) A-I      intronic
chr1:173961375(-) A-I      intronic
chr1:173972841(-) A-I      intronic
chr1:173975259(-) A-I      intronic
chr1:173963295(-) A-I      intronic
chr1:173915159(-) A-I      intronic
chr1:173913303(-) A-I      intronic
chr1:173975269(-) A-I      intronic
chr1:173946259(-) A-I      intronic
chr1:173958608(-) A-I      intronic
chr1:173972413(-) A-I      intronic
chr1:173962758(-) A-I      intronic
chr1:173970778(-) A-I      intronic
chr1:173968361(-) A-I      intronic
chr1:173963445(-) A-I      intronic
chr1:173973365(-) A-I      intronic
chr1:173976632(-) A-I      intronic
chr1:173915040(-) A-I      intronic
chr1:173960220(-) A-I      intronic
chr1:173985656(-) A-I      intronic
chr1:173959919(-) A-I      intronic
chr1:173924541(-) A-I      intronic
chr1:173960029(-) A-I      intronic
chr1:173981732(-) A-I      intronic
chr1:173972442(-) A-I      intronic
chr1:173972269(-) A-I      intronic
chr1:173976769(-) A-I      intronic
chr1:173970808(-) A-I      intronic
chr1:173970661(-) A-I      intronic
chr1:173960286(-) A-I      intronic
chr1:173963338(-) A-I      intronic
chr1:173984737(-) A-I      intronic
chr1:173962670(-) A-I      intronic
chr1:173978836(-) A-I      intronic
chr1:173972282(-) A-I      intronic
chr1:173914951(-) A-I      intronic
chr1:173978720(-) A-I      intronic
chr1:173970681(-) A-I      intronic
chr1:173948535(-) A-I      intronic
chr1:173976323(-) A-I      intronic
chr1:173925734(-) A-I      intronic
chr1:173924686(-) A-I      intronic
chr1:173960185(-) A-I      intronic
chr1:173973873(-) A-I      intronic
chr1:173976815(-) A-I      intronic
chr1:173915016(-) A-I      intronic
chr1:173990087(-) A-I      intronic
chr1:173914862(-) A-I      intronic
chr1:173982773(-) A-I      intronic
chr1:173966281(-) A-I      intronic
chr1:173915303(-) A-I      intronic
chr1:173959935(-) A-I      intronic
chr1:173948694(-) A-I      intronic
chr1:173962660(-) A-I      intronic
chr1:173976781(-) A-I      intronic
chr1:173976875(-) A-I      intronic
chr1:173975258(-) A-I      intronic
chr1:173927514(-) A-I      intronic
chr1:173919183(-) A-I      intronic
chr1:173975233(-) A-I      intronic
chr1:173960205(-) A-I      intronic
chr1:173978854(-) A-I      intronic
chr1:173919247(-) A-I      intronic
chr1:173973388(-) A-I      intronic
chr1:173959941(-) A-I      intronic
chr1:173924736(-) A-I      intronic
chr1:173972974(-) A-I      intronic
chr1:173923077(-) A-I      intronic
chr1:173972928(-) A-I      intronic
chr1:173910154(-) A-I      intronic
chr1:173974100(-) A-I      intronic
chr1:173915281(-) A-I      intronic
chr1:173960291(-) A-I      intronic
chr1:173985669(-) A-I      intronic
chr1:173910153(-) A-I      intronic
chr1:173914360(-) A-I      intronic
chr1:173972377(-) A-I      intronic
chr1:173982843(-) A-I      intronic
chr1:173960113(-) A-I      intronic
chr1:173973555(-) A-I      intronic
chr1:173910133(-) A-I      intronic
chr1:173968180(-) A-I      intronic
chr1:173973348(-) A-I      intronic
chr1:173926225(-) A-I      intronic
chr1:173972938(-) A-I      intronic
chr1:173973641(-) A-I      intronic
chr1:173972345(-) A-I      intronic
chr1:173972260(-) A-I      intronic
chr1:173968058(-) A-I      intronic
chr1:173914943(-) A-I      intronic
chr1:173972253(-) A-I      intronic
chr1:173979779(-) A-I      intronic
chr1:173976637(-) A-I      intronic
chr1:173913092(-) A-I      intronic
chr1:173949164(-) A-I      intronic
chr1:173914402(-) A-I      intronic
chr1:173984684(-) A-I      intronic
chr1:173910124(-) A-I      intronic
chr1:173976314(-) A-I      intronic
chr1:173913032(-) A-I      intronic
chr1:173940374(-) A-I      intronic
chr1:173913196(-) A-I      intronic
chr1:173913094(-) A-I      intronic
chr1:173962901(-) A-I      intronic
chr1:173959492(-) A-I      intronic
chr1:173984848(-) A-I      intronic
chr1:173935231(-) A-I      intronic
chr1:173960196(-) A-I      intronic
chr1:173981338(-) A-I      intronic
chr1:173913105(-) A-I      intronic
chr1:173974137(-) A-I      intronic
chr1:173960246(-) A-I      intronic
chr1:173914465(-) A-I      intronic
chr1:173913229(-) A-I      intronic
chr1:173960256(-) A-I      intronic
chr1:173919675(-) A-I      intronic
chr1:173959374(-) A-I      intronic
chr1:173981307(-) A-I      intronic
chr1:173959489(-) A-I      intronic
chr1:173984667(-) A-I      intronic
chr1:173914881(-) A-I      intronic
chr1:173945483(-) A-I      intronic
chr1:173970677(-) A-I      intronic
chr1:173978974(-) A-I      intronic
chr1:173913230(-) A-I      intronic
chr1:173976823(-) A-I      intronic
chr1:173963749(-) A-I      intronic
chr1:173915220(-) A-I      intronic
chr1:173975262(-) A-I      intronic
chr1:173962803(-) A-I      intronic
chr1:173981230(-) A-I      intronic
chr1:173945392(-) A-I      intronic
chr1:173914482(-) A-I      intronic
chr1:173915010(-) A-I      intronic
chr1:173976698(-) A-I      intronic
chr1:173973072(-) A-I      intronic
chr1:173963409(-) A-I      intronic
chr1:173914374(-) A-I      intronic
chr1:173914942(-) A-I      intronic
chr1:173976636(-) A-I      intronic
chr1:173962647(-) A-I      intronic
chr1:173918644(-) A-I      intronic
chr1:173949154(-) A-I      intronic
chr1:173982718(-) A-I      intronic
chr1:173972376(-) A-I      intronic
chr1:173945489(-) A-I      intronic
chr1:173973390(-) A-I      intronic
chr1:173976771(-) A-I      intronic
chr1:173914914(-) A-I      intronic
chr1:173920424(-) A-I      intronic
chr1:173910186(-) A-I      intronic
chr1:173968364(-) A-I      intronic
chr1:173960332(-) A-I      intronic
chr1:173960285(-) A-I      intronic
chr1:173919968(-) A-I      intronic
chr1:173990085(-) A-I      intronic
chr1:173923055(-) A-I      intronic
chr1:173962804(-) A-I      intronic
chr1:173914545(-) A-I      intronic
chr1:173908785(-) A-I      intronic
chr1:173976814(-) A-I      intronic
chr1:173926835(-) A-I      intronic
chr1:173960211(-) A-I      intronic
chr1:173976338(-) A-I      intronic
chr1:173948718(-) A-I      intronic
chr1:173960165(-) A-I      intronic
chr1:173910164(-) A-I      intronic
chr1:173910213(-) A-I      intronic
chr1:173979690(-) A-I      intronic
chr1:173962710(-) A-I      intronic
chr1:173913216(-) A-I      intronic
chr1:173915254(-) A-I      intronic
chr1:173915238(-) A-I      intronic
chr1:173975081(-) A-I      intronic
chr1:173915046(-) A-I      intronic
chr1:173914278(-) A-I      intronic
chr1:173973088(-) A-I      intronic
chr1:173909522(-) A-I      intronic
chr1:173938135(-) A-I      intronic
chr1:173976726(-) A-I      intronic
chr1:173909497(-) A-I      intronic
chr1:173914433(-) A-I      intronic
chr1:173963364(-) A-I      intronic
chr1:173963828(-) A-I      intronic
chr1:173972267(-) A-I      intronic
chr1:173978864(-) A-I      intronic
chr1:173960013(-) A-I      intronic
chr1:173981355(-) A-I      intronic
chr1:173972866(-) A-I      intronic
chr1:173972291(-) A-I      intronic
chr1:173949156(-) A-I      intronic
chr1:173918549(-) A-I      intronic
chr1:173972853(-) A-I      intronic
chr1:173984857(-) A-I      intronic
chr1:173973967(-) A-I      intronic
chr1:173910135(-) A-I      intronic
chr1:173946225(-) A-I      intronic
chr1:173913304(-) A-I      intronic
chr1:173963913(-) A-I      intronic
chr1:173922518(-) A-I      intronic
chr1:173976784(-) A-I      intronic
chr1:173949283(-) A-I      intronic
chr1:173975223(-) A-I      intronic
chr1:173948685(-) A-I      intronic
chr1:173908586(-) A-I      intronic
chr1:173972979(-) A-I      intronic
chr1:173914468(-) A-I      intronic
chr1:173915143(-) A-I      intronic
chr1:173948529(-) A-I      intronic
chr1:173978765(-) A-I      intronic
chr1:173936411(-) A-I      intronic
chr1:173915020(-) A-I      intronic
chr1:173914984(-) A-I      intronic
chr1:173979615(-) A-I      intronic
chr1:173963319(-) A-I      intronic
chr1:173915015(-) A-I      intronic
chr1:173981293(-) A-I      intronic
chr1:173915041(-) A-I      intronic
chr1:173949221(-) A-I      intronic
chr1:173972304(-) A-I      intronic
chr1:173976778(-) A-I      intronic
chr1:173913093(-) A-I      intronic
chr1:173984879(-) A-I      intronic
chr1:173972281(-) A-I      intronic
chr1:173943296(-) A-I      intronic
chr1:173970653(-) A-I      intronic
chr1:173972403(-) A-I      intronic
chr1:173948682(-) A-I      intronic
chr1:173926978(-) A-I      intronic
chr1:173970768(-) A-I      intronic
chr1:173919691(-) A-I      intronic
chr1:173959313(-) A-I      intronic
chr1:173960120(-) A-I      intronic
chr1:173913079(-) A-I      intronic
chr1:173959303(-) A-I      intronic
chr1:173973360(-) A-I      intronic
chr1:173978867(-) A-I      intronic
chr1:173984708(-) A-I      intronic
chr1:173962643(-) A-I      intronic
chr1:173924699(-) A-I      intronic
chr1:173914888(-) A-I      intronic
chr1:173962575(-) A-I      intronic
chr1:173918689(-) A-I      intronic
chr1:173946262(-) A-I      intronic
chr1:173914934(-) A-I      intronic
chr1:173982959(-) A-I      intronic
chr1:173915017(-) A-I      intronic
chr1:173976770(-) A-I      intronic
chr1:173915255(-) A-I      intronic
chr1:173955298(-) A-I      intronic
chr1:173968120(-) A-I      intronic
chr1:173913046(-) A-I      intronic
chr1:173974030(-) A-I      intronic
chr1:173972478(-) A-I      intronic
chr1:173960268(-) A-I      intronic
chr1:173913112(-) A-I      intronic
chr1:173963516(-) A-I      intronic
chr1:173978893(-) A-I      intronic
chr1:173976779(-) A-I      intronic
chr1:173924660(-) A-I      intronic
chr1:173926216(-) A-I      intronic
chr1:173960007(-) A-I      intronic
chr1:173962696(-) A-I      intronic
chr1:173974130(-) A-I      intronic
chr1:173984932(-) A-I      intronic
chr1:173948621(-) A-I      intronic
chr1:173982784(-) A-I      intronic
chr1:173970757(-) A-I      intronic
chr1:173926837(-) A-I      intronic
chr1:173963145(-) A-I      intronic
chr1:173960275(-) A-I      intronic
chr1:173913236(-) A-I      intronic
chr1:173918671(-) A-I      intronic
chr1:173981328(-) A-I      intronic
chr1:173922506(-) A-I      intronic
chr1:173949063(-) A-I      intronic
chr1:173963692(-) A-I      intronic
chr1:173981312(-) A-I      intronic
chr1:173968107(-) A-I      intronic
chr1:173978913(-) A-I      intronic
chr1:173970763(-) A-I      intronic
chr1:173958472(-) A-I      intronic
chr1:173919120(-) A-I      intronic
chr1:173979798(-) A-I      intronic
chr1:173960219(-) A-I      intronic
chr1:173981131(-) A-I      intronic
chr1:173938164(-) A-I      intronic
chr1:173913131(-) A-I      intronic
chr1:173959378(-) A-I      intronic
chr1:173984776(-) A-I      intronic
chr1:173935242(-) A-I      intronic
chr1:173914415(-) A-I      intronic
chr1:173963804(-) A-I      intronic
chr1:173978732(-) A-I      intronic
chr1:173908825(-) A-I      intronic
chr1:173923163(-) A-I      intronic
chr1:173974139(-) A-I      intronic
chr1:173973626(-) A-I      intronic
chr1:173983000(-) A-I      intronic
chr1:173963840(-) A-I      intronic
chr1:173979650(-) A-I      intronic
chr1:173913177(-) A-I      intronic
chr1:173963375(-) A-I      intronic
chr1:173913190(-) A-I      intronic
chr1:173981909(-) A-I      intronic
chr1:173973502(-) A-I      intronic
chr1:173959879(-) A-I      intronic
chr1:173915167(-) A-I      intronic
chr1:173945576(-) A-I      intronic
chr1:173948670(-) A-I      intronic
chr1:173982720(-) A-I      intronic
chr1:173976758(-) A-I      intronic
chr1:173961421(-) A-I      intronic
chr1:173962669(-) A-I      intronic
chr1:173913031(-) A-I      intronic
chr1:173915185(-) A-I      intronic
chr1:173982783(-) A-I      intronic
chr1:173962709(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED RC3H1
chr1:173959374(-) A-I intron -    22327324
chr1:173960211(-) A-I intron -    21960545   //22327324
chr1:173913131(-) A-I intron -    21960545
chr1:173914415(-) A-I intron -    21960545
chr1:173922521(-) A-I intron -    21960545
chr1:173922564(-) A-I intron -    21960545
chr1:173926216(-) A-I intron -    21960545
chr1:173926222(-) A-I intron -    21960545
chr1:173936375(-) A-I intron -    21960545
chr1:173936376(-) A-I intron -    21960545
chr1:173945489(-) A-I intron -    21960545
chr1:173948670(-) A-I intron -    21960545
chr1:173949154(-) A-I intron -    21960545
chr1:173949156(-) A-I intron -    21960545
chr1:173949164(-) A-I intron -    21960545
chr1:173908586(-) A-G intron -    22484847
chr1:173909497(-) A-G intron -    22484847
chr1:173909522(-) A-G intron -    22484847
chr1:173910135(-) A-G intron -    22484847
chr1:173910154(-) A-G intron -    22484847
chr1:173910186(-) A-G intron -    22484847
chr1:173910213(-) A-G intron -    22484847
chr1:173911377(-) G-A intron -    22484847
chr1:173911379(-) G-T intron -    22484847
chr1:173911589(-) C-T intron -    22484847
chr1:173913032(-) A-G intron -    22484847
chr1:173913079(-) A-G intron -    22484847
chr1:173913105(-) A-G intron -    22484847
chr1:173913112(-) A-G intron -    22484847
chr1:173913177(-) A-G intron -    22484847
chr1:173913190(-) A-G intron -    22484847
chr1:173913196(-) A-G intron -    22484847
chr1:173913216(-) A-G intron -    22484847
chr1:173913229(-) A-G intron -    22484847
chr1:173913236(-) A-G intron -    22484847
chr1:173914278(-) A-G intron -    22484847
chr1:173914415(-) A-G intron -    22484847
chr1:173914545(-) A-G intron -    22484847
chr1:173914914(-) A-G intron -    22484847
chr1:173914934(-) A-G intron -    22484847
chr1:173914951(-) A-G intron -    22484847
chr1:173915010(-) A-G intron -    22484847
chr1:173915058(-) T-C intron -    22484847
chr1:173915167(-) A-G intron -    22484847
chr1:173915185(-) A-G intron -    22484847
chr1:173915220(-) A-G intron -    22484847
chr1:173915238(-) A-G intron -    22484847
chr1:173915244(-) A-G intron -    22484847
chr1:173915254(-) A-G intron -    22484847
chr1:173915255(-) A-G intron -    22484847
chr1:173915303(-) A-G intron -    22484847
chr1:173917117(-) T-G intron -    22484847
chr1:173919247(-) A-G intron -    22484847
chr1:173919675(-) A-G intron -    22484847
chr1:173919691(-) A-G intron -    22484847
chr1:173919968(-) A-G intron -    22484847
chr1:173920424(-) A-G intron -    22484847
chr1:173923077(-) A-G intron -    22484847
chr1:173923163(-) A-G intron -    22484847
chr1:173924541(-) A-G intron -    22484847
chr1:173924660(-) A-G intron -    22484847
chr1:173924736(-) A-G intron -    22484847
chr1:173925734(-) A-G intron -    22484847
chr1:173925804(-) A-T intron -    22484847
chr1:173925805(-) A-T intron -    22484847
chr1:173926216(-) A-G intron -    22484847
chr1:173926835(-) A-G intron -    22484847
chr1:173927441(-) T-C intron -    22484847
chr1:173927514(-) A-G intron -    22484847
chr1:173929244(-) A-T intron -    22484847
chr1:173929245(-) G-T intron -    22484847
chr1:173935732(-) T-C intron -    22484847
chr1:173936411(-) A-G intron -    22484847
chr1:173938135(-) A-G intron -    22484847
chr1:173938164(-) A-G intron -    22484847
chr1:173938165(-) A-G intron -    22484847
chr1:173945392(-) A-G intron -    22484847
chr1:173945489(-) A-G intron -    22484847
chr1:173946061(-) G-A intron -    22484847
chr1:173948529(-) A-G intron -    22484847
chr1:173948535(-) A-G intron -    22484847
chr1:173948621(-) A-G intron -    22484847
chr1:173948670(-) A-G intron -    22484847
chr1:173948685(-) A-G intron -    22484847
chr1:173948694(-) A-G intron -    22484847
chr1:173948711(-) A-G intron -    22484847
chr1:173948718(-) A-G intron -    22484847
chr1:173949164(-) A-G intron -    22484847
chr1:173959374(-) A-G intron -    22484847
chr1:173959492(-) A-G intron -    22484847
chr1:173959828(-) C-T intron -    22484847
chr1:173959935(-) A-G intron -    22484847
chr1:173959941(-) A-G intron -    22484847
chr1:173960012(-) A-G intron -    22484847
chr1:173960013(-) A-G intron -    22484847
chr1:173960120(-) A-G intron -    22484847
chr1:173960185(-) A-G intron -    22484847
chr1:173960205(-) A-G intron -    22484847
chr1:173960211(-) A-G intron -    22484847
chr1:173960246(-) A-G intron -    22484847
chr1:173960256(-) A-G intron -    22484847
chr1:173960268(-) A-G intron -    22484847
chr1:173960275(-) A-G intron -    22484847
chr1:173960285(-) A-G intron -    22484847
chr1:173960286(-) A-G intron -    22484847
chr1:173960291(-) A-G intron -    22484847
chr1:173960332(-) A-G intron -    22484847
chr1:173961375(-) A-G intron -    22484847
chr1:173961421(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase RC3H1
chr1:173902279-173902280(-) m6A 3'UTR       24981863//27773535
chr1:173902285-173902286(-) m6A 3'UTR       24981863//27773535
chr1:173902327-173902328(-) m6A 3'UTR       24981863//27773535
chr1:173902344-173902345(-) m6A 3'UTR       24981863//27773535
chr1:173902358-173902359(-) m6A 3'UTR       24981863//27773535
chr1:173902376-173902377(-) m6A 3'UTR       24981863//27773535
chr1:173902429-173902430(-) m6A 3'UTR       24981863
chr1:173902474-173902475(-) m6A 3'UTR       24981863
chr1:173907401-173907402(-) m6A 3'UTR       27773535
chr1:173907702-173907703(-) m6A 3'UTR       24981863//27773535
chr1:173907717-173907718(-) m6A 3'UTR//exon       24981863//27773535
chr1:173907778-173907779(-) m6A 3'UTR//exon       24981863//27773535
chr1:173907925-173907926(-) m6A CDS//exon       27773535//22608085
chr1:173907937-173907938(-) m6A CDS//exon       27773535//27371828//22608085
chr1:173907950-173907951(-) m6A CDS//exon       27773535//27371828//22608085
chr1:173907955-173907956(-) m6A CDS//exon       27773535//27371828//22608085
chr1:173910420-173910421(-) m6A CDS//exon       27773535//27371828
chr1:173910438-173910439(-) m6A CDS//exon       27773535//27371828
chr1:173910446-173910447(-) m6A CDS//exon       24981863//27773535//27371828
chr1:173910455-173910456(-) m6A CDS//exon       24981863//27773535//27371828
chr1:173910470-173910471(-) m6A CDS//exon       24981863//27773535//27371828
chr1:173910485-173910486(-) m6A CDS//exon       24981863//27773535//27371828
chr1:173910498-173910499(-) m6A CDS//exon       24981863//27773535//27371828
chr1:173910513-173910514(-) m6A CDS//exon       24981863//27773535//27371828
chr1:173912588-173912589(-) m6A CDS       27371828
chr1:173912596-173912597(-) m6A CDS       27371828
chr1:173912630-173912631(-) m6A CDS       27371828
chr1:173912715-173912716(-) m6A CDS       -
chr1:173916628-173916629(-) m6A CDS       24981863
chr1:173916659-173916660(-) m6A CDS       24981863
chr1:173916694-173916695(-) m6A CDS       24981863
chr1:173930325-173930326(-) m6A CDS//exon       24284625//24981863
chr1:173930379-173930380(-) m6A CDS//exon       24284625//24981863//27773535
chr1:173930877-173930878(-) m6A CDS//exon       24284625//24981863//27773535
chr1:173931109-173931110(-) m6A CDS       24284625//24981863//27773535
chr1:173931165-173931166(-) m6A CDS       24284625//24981863//27773535
chr1:173933129-173933130(-) m6A CDS       27773535
chr1:173933225-173933226(-) m6A CDS       27773535
chr1:173961944-173961945(-) m6A CDS       27773535//22608085
chr1:173961960-173961961(-) m6A CDS       27773535//22608085
chr1:173961991-173961992(-) m6A CDS       24284625//27773535//22608085
chr1:173962053-173962054(-) m6A CDS       24284625//24981863//27773535//22608085
chr1:173962065-173962066(-) m6A CDS       24284625//24981863//27773535//22608085
chr1:173962210-173962211(-) m6A 5'UTR       24284625//24981863//27773535//22608085
chr1:173991241-173991242(-) m6A 5'UTR       24284625//24209618//24981863//27773536//22608085
chr1:173991270-173991271(-) m6A 5'UTR       24209618//24981863//27371828//27773536
chr1:173991339-173991340(-) m6A 5'UTR       24209618//24981863//27371828//27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-190a-5p
Exosome Hepatocellular carcinoma cell line (HepG2)|Lung epithelial carcinoma cell line (A549)     20615901
Exosome Brain tissue     23382797
Exosome Plasma     23663360
Exosome Plasma     24683445
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Hepatocellular carcinoma cell line (HepG2)|Lung epithelial carcinoma cell line (A549)     20615901
Microvesicle Colon cancer cell line (LIM1863)|Mesenchymal stem cells|Urine     -
RC3H1
Chromatin K562 cells     -
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Cytosol HCC cell line (HepG2)|K562 cells     -
Exosome Blood     -
Membrane HCC cell line (HepG2)|K562 cells     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus Nasopharyngeal carcinoma cells     20498841
Nucleus HCC cell line (HepG2)|HeLa-S3 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-190a-5p
Interactor2: RC3H1

Evidence Support:


Weak-Evidence RNA-Seq
Prediction-Evidence DIANA-microT//miRDB//Targetscan
Support Database ViRBase

References:


PMID 31570108 Target region None
Source ViRBase Interactor1 expression None
Tissue or cell line ARPE-19 human RPE cells Interactor2 expression None
Description Table 1 List of miRNAs that were differentially expressed between EBOV- and mock-infected human RPE cells at 24 h post-infection.Putative target genes in EBOV-infected human RPE cells were predicted from the 15 highly differentially expressed miRNAs using algorithms: 2629 targets by Diana microT; 1799 targets by miRDB; and 14315 targets by TargetScan (Additional file 5).

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