Detail Information

Basic Information:


  VIRBase ID:  

HHID00004875

  Virus:  

Zaire ebolavirus (ZEBOV)

  Host:  

Homo sapiens

  Confidence Score:  

0.6002

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-190a-5p:           MBTD1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-190a-5p MBTD1
miRBase
Accession/Entrez ID
MIMAT0000458 54799
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - SA49P01

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-190a-5p
rs1018706777 chr15:62823984    A/G
rs1369926402 chr15:62823991    G/A
rs1555521311 chr15:62823990    G/C
rs755866868 chr15:62823986    A/G
rs766742872 chr15:62823990    GGTT/G
rs777464613 chr15:62823987    T/G
rs1228899174 chr15:62823974    T/A
rs1281303771 chr15:62823976    T/C
rs1350000299 chr15:62823972    G/A

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR MBTD1
chr17:49291524(-) A-I      intronic
chr17:49312664(-) A-I      intronic
chr17:49312661(-) A-I      intronic
chr17:49278464(-) A-I      intronic
chr17:49312731(-) A-I      intronic
chr17:49312723(-) A-I      intronic
chr17:49312700(-) A-I      intronic
chr17:49312685(-) A-I      intronic
chr17:49312667(-) A-I      intronic
chr17:49278392(-) A-I      intronic
chr17:49267881(-) A-I      intronic
chr17:49276376(-) A-I      intronic
chr17:49311672(-) A-I      intronic
chr17:49311606(-) A-I      intronic
chr17:49333160(-) A-I      intronic
chr17:49307226(-) A-I      intronic
chr17:49306519(-) A-I      intronic
chr17:49306499(-) A-I      intronic
chr17:49304839(-) A-I      intronic
chr17:49304814(-) A-I      intronic
chr17:49304737(-) A-I      intronic
chr17:49304725(-) A-I      intronic
chr17:49304678(-) A-I      intronic
chr17:49304677(-) A-I      intronic
chr17:49304212(-) A-I      intronic
chr17:49303788(-) A-I      intronic
chr17:49303655(-) A-I      intronic
chr17:49303629(-) A-I      intronic
chr17:49303628(-) A-I      intronic
chr17:49303412(-) A-I      intronic
chr17:49301114(-) A-I      intronic
chr17:49301062(-) A-I      intronic
chr17:49301034(-) A-I      intronic
chr17:49301030(-) A-I      intronic
chr17:49301025(-) A-I      intronic
chr17:49300980(-) A-I      intronic
chr17:49300890(-) A-I      intronic
chr17:49300850(-) A-I      intronic
chr17:49300769(-) A-I      intronic
chr17:49300691(-) A-I      intronic
chr17:49300681(-) A-I      intronic
chr17:49300659(-) A-I      intronic
chr17:49300286(-) A-I      intronic
chr17:49300258(-) A-I      intronic
chr17:49299863(-) A-I      intronic
chr17:49299823(-) A-I      intronic
chr17:49298577(-) A-I      intronic
chr17:49298573(-) A-I      intronic
chr17:49298391(-) A-I      intronic
chr17:49295058(-) A-I      intronic
chr17:49295052(-) A-I      intronic
chr17:49295038(-) A-I      intronic
chr17:49294394(-) A-I      intronic
chr17:49274574(-) A-I      intronic
chr17:49274555(-) A-I      intronic
chr17:49293512(-) A-I      intronic
chr17:49293486(-) A-I      intronic
chr17:49291600(-) A-I      intronic
chr17:49290644(-) A-I      intronic
chr17:49290643(-) A-I      intronic
chr17:49290564(-) A-I      intronic
chr17:49290538(-) A-I      intronic
chr17:49290521(-) A-I      intronic
chr17:49289527(-) A-I      intronic
chr17:49288768(-) A-I      intronic
chr17:49288759(-) A-I      intronic
chr17:49288686(-) A-I      intronic
chr17:49288001(-) A-I      intronic
chr17:49287954(-) A-I      intronic
chr17:49287624(-) A-I      intronic
chr17:49274167(-) A-I      intronic
chr17:49274086(-) A-I      intronic
chr17:49273767(-) A-I      intronic
chr17:49273762(-) A-I      intronic
chr17:49273729(-) A-I      intronic
chr17:49273723(-) A-I      intronic
chr17:49273722(-) A-I      intronic
chr17:49273677(-) A-I      intronic
chr17:49273480(-) A-I      intronic
chr17:49273386(-) A-I      intronic
chr17:49273380(-) A-I      intronic
chr17:49272251(-) A-I      intronic
chr17:49272199(-) A-I      intronic
chr17:49272169(-) A-I      intronic
chr17:49272013(-) A-I      intronic
chr17:49271774(-) A-I      intronic
chr17:49271212(-) A-I      intronic
chr17:49271185(-) A-I      intronic
chr17:49287536(-) A-I      intronic
chr17:49287495(-) A-I      intronic
chr17:49268760(-) A-I      intronic
chr17:49268651(-) A-I      intronic
chr17:49268336(-) A-I      intronic
chr17:49268199(-) A-I      intronic
chr17:49260703(-) A-I      intronic
chr17:49260700(-) A-I      intronic
chr17:49260643(-) A-I      intronic
chr17:49260634(-) A-I      intronic
chr17:49260589(-) A-I      intronic
chr17:49287420(-) A-I      intronic
chr17:49278419(-) A-I      intronic
chr17:49278395(-) A-I      intronic
chr17:49260574(-) A-I      intronic
chr17:49259725(-) A-I      intronic
chr17:49278103(-) A-I      intronic
chr17:49278101(-) A-I      intronic
chr17:49259707(-) A-I      intronic
chr17:49259646(-) A-I      intronic
chr17:49277472(-) A-I      intronic
chr17:49276979(-) A-I      intronic
chr17:49259588(-) A-I      intronic
chr17:49259582(-) A-I      intronic
chr17:49259575(-) A-I      intronic
chr17:49259559(-) A-I      intronic
chr17:49258992(-) A-I      intronic
chr17:49258976(-) A-I      intronic
chr17:49258935(-) A-I      intronic
chr17:49258918(-) A-I      intronic
chr17:49278045(-) A-I      intronic
chr17:49277990(-) A-I      intronic
chr17:49277912(-) A-I      intronic
chr17:49277688(-) A-I      intronic
chr17:49333177(-) A-I      intronic
chr17:49267904(-) A-I      intronic
chr17:49276931(-) A-I      intronic
chr17:49276918(-) A-I      intronic
chr17:49276905(-) A-I      intronic
chr17:49276457(-) A-I      intronic
chr17:49332474(-) A-I      intronic
chr17:49332462(-) A-I      intronic
chr17:49332400(-) A-I      intronic
chr17:49330013(-) A-I      intronic
chr17:49329931(-) A-I      intronic
chr17:49329862(-) A-I      intronic
chr17:49329223(-) A-I      intronic
chr17:49329212(-) A-I      intronic
chr17:49326577(-) A-I      intronic
chr17:49326564(-) A-I      intronic
chr17:49276375(-) A-I      intronic
chr17:49276373(-) A-I      intronic
chr17:49276324(-) A-I      intronic
chr17:49276302(-) A-I      intronic
chr17:49276301(-) A-I      intronic
chr17:49276296(-) A-I      intronic
chr17:49276286(-) A-I      intronic
chr17:49276279(-) A-I      intronic
chr17:49276266(-) A-I      intronic
chr17:49274686(-) A-I      intronic
chr17:49274671(-) A-I      intronic
chr17:49274645(-) A-I      intronic
chr17:49326409(-) A-I      intronic
chr17:49325054(-) A-I      intronic
chr17:49325048(-) A-I      intronic
chr17:49316417(-) A-I      intronic
chr17:49316304(-) A-I      intronic
chr17:49274631(-) A-I      intronic
chr17:49274627(-) A-I      intronic
chr17:49274610(-) A-I      intronic
chr17:49314509(-) A-I      intronic
chr17:49314475(-) A-I      intronic
chr17:49313731(-) A-I      intronic
chr17:49312726(-) A-I      intronic
chr17:49312679(-) A-I      intronic
chr17:49312653(-) A-I      intronic
chr17:49312634(-) A-I      intronic
chr17:49312613(-) A-I      intronic
chr17:49312589(-) A-I      intronic
chr17:49311727(-) A-I      intronic
chr17:49329836(-) A-I      intronic
chr17:49267899(-) A-I      intronic
chr17:49303811(-) A-I      intronic
chr17:49267915(-) A-I      intronic
chr17:49278066(-) A-I      intronic
chr17:49275141(-) A-I      intronic
chr17:49267837(-) A-I      intronic
chr17:49314535(-) A-I      intronic
chr17:49295859(-) A-I      intronic
chr17:49327530(-) A-I      intronic
chr17:49300789(-) A-I      intronic
chr17:49326497(-) A-I      intronic
chr17:49267836(-) A-I      intronic
chr17:49277882(-) A-I      intronic
chr17:49303355(-) A-I      intronic
chr17:49260702(-) A-I      intronic
chr17:49271077(-) A-I      intronic
chr17:49327516(-) A-I      intronic
chr17:49300326(-) A-I      intronic
chr17:49318513(-) A-I      intronic
chr17:49268169(-) A-I      intronic
chr17:49271206(-) A-I      intronic
chr17:49287995(-) A-I      intronic
chr17:49312569(-) A-I      intronic
chr17:49294332(-) A-I      intronic
chr17:49277834(-) A-I      intronic
chr17:49290603(-) A-I      intronic
chr17:49274984(-) A-I      intronic
chr17:49302851(-) A-I      intronic
chr17:49272051(-) A-I      intronic
chr17:49267997(-) A-I      intronic
chr17:49329264(-) A-I      intronic
chr17:49318477(-) A-I      intronic
chr17:49268437(-) A-I      intronic
chr17:49289656(-) A-I      intronic
chr17:49324147(-) A-I      intronic
chr17:49271870(-) A-I      intronic
chr17:49272188(-) A-I      intronic
chr17:49268787(-) A-I      intronic
chr17:49278414(-) A-I      intronic
chr17:49287527(-) A-I      intronic
chr17:49304853(-) A-I      intronic
chr17:49289546(-) A-I      intronic
chr17:49303479(-) A-I      intronic
chr17:49271739(-) A-I      intronic
chr17:49258908(-) A-I      intronic
chr17:49276469(-) A-I      intronic
chr17:49290682(-) A-I      intronic
chr17:49287872(-) A-I      intronic
chr17:49302829(-) A-I      intronic
chr17:49272008(-) A-I      intronic
chr17:49333217(-) A-I      intronic
chr17:49329830(-) A-I      intronic
chr17:49267961(-) A-I      intronic
chr17:49259004(-) A-I      intronic
chr17:49258478(-) A-I      intronic
chr17:49300709(-) A-I      intronic
chr17:49304908(-) A-I      intronic
chr17:49276206(-) A-I      intronic
chr17:49303611(-) A-I      intronic
chr17:49277843(-) A-I      intronic
chr17:49258948(-) A-I      intronic
chr17:49333225(-) A-I      intronic
chr17:49277817(-) A-I      intronic
chr17:49325062(-) A-I      intronic
chr17:49294191(-) A-I      intronic
chr17:49276985(-) A-I      intronic
chr17:49316273(-) A-I      intronic
chr17:49267835(-) A-I      intronic
chr17:49311654(-) A-I      intronic
chr17:49268386(-) A-I      intronic
chr17:49326521(-) A-I      intronic
chr17:49303755(-) A-I      intronic
chr17:49314441(-) A-I      intronic
chr17:49272165(-) A-I      intronic
chr17:49327545(-) A-I      intronic
chr17:49288632(-) A-I      intronic
chr17:49268270(-) A-I      intronic
chr17:49258987(-) A-I      intronic
chr17:49330054(-) A-I      intronic
chr17:49274565(-) A-I      intronic
chr17:49300940(-) A-I      intronic
chr17:49276430(-) A-I      intronic
chr17:49291601(-) A-I      intronic
chr17:49332476(-) A-I      intronic
chr17:49276697(-) A-I      intronic
chr17:49271053(-) A-I      intronic
chr17:49303141(-) A-I      intronic
chr17:49326439(-) A-I      intronic
chr17:49321942(-) A-I      intronic
chr17:49273407(-) A-I      intronic
chr17:49312778(-) A-I      intronic
chr17:49274682(-) A-I      intronic
chr17:49314545(-) A-I      intronic
chr17:49329319(-) A-I      intronic
chr17:49329399(-) A-I      intronic
chr17:49272055(-) A-I      intronic
chr17:49278271(-) A-I      intronic
chr17:49314513(-) A-I      intronic
chr17:49268359(-) A-I      intronic
chr17:49272152(-) A-I      intronic
chr17:49268207(-) A-I      intronic
chr17:49291594(-) A-I      intronic
chr17:49304053(-) A-I      intronic
chr17:49267971(-) A-I      intronic
chr17:49274666(-) A-I      intronic
chr17:49300676(-) A-I      intronic
chr17:49300853(-) A-I      intronic
chr17:49273996(-) A-I      intronic
chr17:49332457(-) A-I      intronic
chr17:49303862(-) A-I      intronic
chr17:49278277(-) A-I      intronic
chr17:49290596(-) A-I      intronic
chr17:49302997(-) A-I      intronic
chr17:49265110(-) A-I      intronic
chr17:49321962(-) A-I      intronic
chr17:49301075(-) A-I      intronic
chr17:49268323(-) A-I      intronic
chr17:49271147(-) A-I      intronic
chr17:49295773(-) A-I      intronic
chr17:49327465(-) A-I      intronic
chr17:49288806(-) A-I      intronic
chr17:49268268(-) A-I      intronic
chr17:49302921(-) A-I      intronic
chr17:49329957(-) A-I      intronic
chr17:49274104(-) A-I      intronic
chr17:49322533(-) A-I      intronic
chr17:49265098(-) A-I      intronic
chr17:49275074(-) A-I      intronic
chr17:49259601(-) A-I      intronic
chr17:49268362(-) A-I      intronic
chr17:49268363(-) A-I      intronic
chr17:49276622(-) A-I      intronic
chr17:49275154(-) A-I      intronic
chr17:49278317(-) A-I      intronic
chr17:49303277(-) A-I      intronic
chr17:49303812(-) A-I      intronic
chr17:49304674(-) A-I      intronic
chr17:49289637(-) A-I      intronic
chr17:49273817(-) A-I      intronic
chr17:49260421(-) A-I      intronic
chr17:49288827(-) A-I      intronic
chr17:49303728(-) A-I      intronic
chr17:49271744(-) A-I      intronic
chr17:49287584(-) A-I      intronic
chr17:49278278(-) A-I      intronic
chr17:49326585(-) A-I      intronic
chr17:49272076(-) A-I      intronic
chr17:49290442(-) A-I      intronic
chr17:49330032(-) A-I      intronic
chr17:49332542(-) A-I      intronic
chr17:49300032(-) A-I      intronic
chr17:49271768(-) A-I      intronic
chr17:49271701(-) A-I      intronic
chr17:49299972(-) A-I      intronic
chr17:49287932(-) A-I      intronic
chr17:49288746(-) A-I      intronic
chr17:49295688(-) A-I      intronic
chr17:49288374(-) A-I      intronic
chr17:49267677(-) A-I      intronic
chr17:49276274(-) A-I      intronic
chr17:49295611(-) A-I      intronic
chr17:49278449(-) A-I      intronic
chr17:49272250(-) A-I      intronic
chr17:49303614(-) A-I      intronic
chr17:49271225(-) A-I      intronic
chr17:49326415(-) A-I      intronic
chr17:49268417(-) A-I      intronic
chr17:49301012(-) A-I      intronic
chr17:49268445(-) A-I      intronic
chr17:49258493(-) A-I      intronic
chr17:49294396(-) A-I      intronic
chr17:49288376(-) A-I      intronic
chr17:49276595(-) A-I      intronic
chr17:49275073(-) A-I      intronic
chr17:49274049(-) A-I      intronic
chr17:49274559(-) A-I      intronic
chr17:49290592(-) A-I      intronic
chr17:49333240(-) A-I      intronic
chr17:49267736(-) A-I      intronic
chr17:49329842(-) A-I      intronic
chr17:49290432(-) A-I      intronic
chr17:49312570(-) A-I      intronic
chr17:49271008(-) A-I      intronic
chr17:49260621(-) A-I      intronic
chr17:49287625(-) A-I      intronic
chr17:49295012(-) A-I      intronic
chr17:49278042(-) A-I      intronic
chr17:49258979(-) A-I      intronic
chr17:49304671(-) A-I      intronic
chr17:49268021(-) A-I      intronic
chr17:49290492(-) A-I      intronic
chr17:49259689(-) A-I      intronic
chr17:49267914(-) A-I      intronic
chr17:49329205(-) A-I      intronic
chr17:49326499(-) A-I      intronic
chr17:49333205(-) A-I      intronic
chr17:49324135(-) A-I      intronic
chr17:49318518(-) A-I      intronic
chr17:49302837(-) A-I      intronic
chr17:49278337(-) A-I      intronic
chr17:49274001(-) A-I      intronic
chr17:49318431(-) A-I      intronic
chr17:49301115(-) A-I      intronic
chr17:49273627(-) A-I      intronic
chr17:49287501(-) A-I      intronic
chr17:49268321(-) A-I      intronic
chr17:49304264(-) A-I      intronic
chr17:49327439(-) A-I      intronic
chr17:49271277(-) A-I      intronic
chr17:49274681(-) A-I      intronic
chr17:49277253(-) A-I      intronic
chr17:49268408(-) A-I      intronic
chr17:49271819(-) A-I      intronic
chr17:49301183(-) A-I      intronic
chr17:49260385(-) A-I      intronic
chr17:49332559(-) A-I      intronic
chr17:49267823(-) A-I      intronic
chr17:49259656(-) A-I      intronic
chr17:49290476(-) A-I      intronic
chr17:49258880(-) A-I      intronic
chr17:49324948(-) A-I      intronic
chr17:49276596(-) A-I      intronic
chr17:49277288(-) A-I      intronic
chr17:49330091(-) A-I      intronic
chr17:49278306(-) A-I      intronic
chr17:49276899(-) A-I      intronic
chr17:49271091(-) A-I      intronic
chr17:49258876(-) A-I      intronic
chr17:49272157(-) A-I      intronic
chr17:49275140(-) A-I      intronic
chr17:49268761(-) A-I      intronic
chr17:49305230(-) A-I      intronic
chr17:49271765(-) A-I      intronic
chr17:49329265(-) A-I      intronic
chr17:49302936(-) A-I      intronic
chr17:49259657(-) A-I      intronic
chr17:49303616(-) A-I      intronic
chr17:49316375(-) A-I      intronic
chr17:49268350(-) A-I      intronic
chr17:49276292(-) A-I      intronic
chr17:49276084(-) A-I      intronic
chr17:49268345(-) A-I      intronic
chr17:49321087(-) A-I      intronic
chr17:49268197(-) A-I      intronic
chr17:49304238(-) A-I      intronic
chr17:49278149(-) A-I      intronic
chr17:49304149(-) A-I      intronic
chr17:49271209(-) A-I      intronic
chr17:49268276(-) A-I      intronic
chr17:49276280(-) A-I      intronic
chr17:49271164(-) A-I      intronic
chr17:49265102(-) A-I      intronic
chr17:49267737(-) A-I      intronic
chr17:49268449(-) A-I      intronic
chr17:49329995(-) A-I      intronic
chr17:49304169(-) A-I      intronic
chr17:49277869(-) A-I      intronic
chr17:49259079(-) A-I      intronic
chr17:49326512(-) A-I      intronic
chr17:49258898(-) A-I      intronic
chr17:49304090(-) A-I      intronic
chr17:49302999(-) A-I      intronic
chr17:49333124(-) A-I      intronic
chr17:49260701(-) A-I      intronic
chr17:49300038(-) A-I      intronic
chr17:49274177(-) A-I      intronic
chr17:49288816(-) A-I      intronic
chr17:49329912(-) A-I      intronic
chr17:49329974(-) A-I      intronic
chr17:49259658(-) A-I      intronic
chr17:49258556(-) A-I      intronic
chr17:49329415(-) A-I      intronic
chr17:49307186(-) A-I      intronic
chr17:49277726(-) A-I      intronic
chr17:49278004(-) A-I      intronic
chr17:49333119(-) A-I      intronic
chr17:49307292(-) A-I      intronic
chr17:49330012(-) A-I      intronic
chr17:49302938(-) A-I      intronic
chr17:49268389(-) A-I      intronic
chr17:49299991(-) A-I      intronic
chr17:49274628(-) A-I      intronic
chr17:49277382(-) A-I      intronic
chr17:49302810(-) A-I      intronic
chr17:49327367(-) A-I      intronic
chr17:49278143(-) A-I      intronic
chr17:49271847(-) A-I      intronic
chr17:49333057(-) A-I      intronic
chr17:49263970(-) A-I      intronic
chr17:49268444(-) A-I      intronic
chr17:49271228(-) A-I      intronic
chr17:49274060(-) A-I      intronic
chr17:49258949(-) A-I      intronic
chr17:49273597(-) A-I      intronic
chr17:49313899(-) A-I      intronic
chr17:49285818(-) A-I      intronic
chr17:49295253(-) A-I      intronic
chr17:49289597(-) A-I      intronic
chr17:49287882(-) A-I      intronic
chr17:49329327(-) A-I      intronic
chr17:49329867(-) A-I      intronic
chr17:49290460(-) A-I      intronic
chr17:49326513(-) A-I      intronic
chr17:49267901(-) A-I      intronic
chr17:49268333(-) A-I      intronic
chr17:49301128(-) A-I      intronic
chr17:49329075(-) A-I      intronic
chr17:49272249(-) A-I      intronic
chr17:49268185(-) A-I      intronic
chr17:49274152(-) A-I      intronic
chr17:49277314(-) A-I      intronic
chr17:49287523(-) A-I      intronic
chr17:49298537(-) A-I      intronic
chr17:49258932(-) A-I      intronic
chr17:49258557(-) A-I      intronic
chr17:49290687(-) A-I      intronic
chr17:49287500(-) A-I      intronic
chr17:49271096(-) A-I      intronic
chr17:49268384(-) A-I      intronic
chr17:49267821(-) A-I      intronic
chr17:49268198(-) A-I      intronic
chr17:49287576(-) A-I      intronic
chr17:49333097(-) A-I      intronic
chr17:49324113(-) A-I      intronic
chr17:49271854(-) A-I      intronic
chr17:49304189(-) A-I      intronic
chr17:49276304(-) A-I      intronic
chr17:49271197(-) A-I      intronic
chr17:49288773(-) A-I      intronic
chr17:49289672(-) A-I      intronic
chr17:49271181(-) A-I      intronic
chr17:49278343(-) A-I      intronic
chr17:49295219(-) A-I      intronic
chr17:49294395(-) A-I      intronic
chr17:49260628(-) A-I      intronic
chr17:49293389(-) A-I      intronic
chr17:49331132(-) A-I      intronic
chr17:49329934(-) A-I      intronic
chr17:49289595(-) A-I      intronic
chr17:49268003(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED MBTD1
chr17:49329075(-) A-I intron -    22327324
chr17:49329836(-) A-I intron -    22327324
chr17:49268333(-) A-I intron -    21960545
chr17:49259601(-) A-G intron -    22484847
chr17:49259656(-) A-G intron -    22484847
chr17:49266292(-) G-A intron -    22484847
chr17:49267914(-) A-G intron -    22484847
chr17:49267915(-) A-G intron -    22484847
chr17:49268359(-) A-G intron -    22484847
chr17:49268437(-) A-G intron -    22484847
chr17:49268444(-) A-G intron -    22484847
chr17:49269015(-) A-G intron -    22484847
chr17:49269035(-) A-G intron -    22484847
chr17:49269039(-) A-G intron -    22484847
chr17:49269058(-) A-G intron -    22484847
chr17:49269081(-) A-G intron -    22484847
chr17:49271228(-) A-G intron -    22484847
chr17:49271768(-) A-G intron -    22484847
chr17:49272055(-) A-G intron -    22484847
chr17:49273996(-) A-G intron -    22484847
chr17:49274682(-) A-G intron -    22484847
chr17:49276596(-) A-G intron -    22484847
chr17:49277314(-) A-G intron -    22484847
chr17:49287500(-) A-G intron -    22484847
chr17:49287501(-) A-G intron -    22484847
chr17:49287523(-) A-G intron -    22484847
chr17:49294191(-) A-G intron -    22484847
chr17:49304149(-) A-G intron -    22484847
chr17:49314545(-) A-G intron -    22484847
chr17:49327530(-) A-G intron -    22484847
chr17:49327545(-) A-G intron -    22484847
chr17:49329205(-) A-G intron -    22484847
chr17:49329836(-) A-G intron -    22484847
chr17:49329912(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase MBTD1
chr17:49255591-49255592(-) m6A 3'UTR       27773535
chr17:49255645-49255646(-) m6A 3'UTR       27773535
chr17:49255786-49255787(-) Y 3'UTR       26075521
chr17:49257542-49257543(-) m6A 3'UTR       27773535
chr17:49257559-49257560(-) m6A 3'UTR       27773535
chr17:49257652-49257653(-) m6A 3'UTR       27773535
chr17:49257735-49257736(-) m6A 3'UTR       27773535
chr17:49257832-49257833(-) m6A 3'UTR       24981863//22608085
chr17:49257844-49257845(-) m6A 3'UTR       24981863//27773535//22608085
chr17:49257890-49257891(-) m6A 3'UTR       25456834//24981863//27773535//22608085
chr17:49257923-49257924(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22608085
chr17:49257948-49257949(-) m6A CDS       24284625//25456834//24981863//27773535//22608085
chr17:49268970-49268971(-) m6A 3'UTR//intron       24981863//27773535
chr17:49269038-49269039(-) m6A 3'UTR//intron       27773535
chr17:49280148-49280149(-) m6A 3'UTR//CDS//exon       24981863//27773535
chr17:49280176-49280177(-) m6A 3'UTR//CDS//exon       24981863//27773535
chr17:49280220-49280221(-) m6A 3'UTR//CDS//exon       24981863//27773535
chr17:49326943-49326944(-) m6A intron       27773535
chr17:49326968-49326969(-) m6A intron       27773535
chr17:49326982-49326983(-) m6A intron       27773535
chr17:49327050-49327051(-) m6A intron       27773535
chr17:49327061-49327062(-) m6A intron       27773535
chr17:49327070-49327071(-) m6A intron       27773535
chr17:49327104-49327105(-) m6A intron       27773535
chr17:49327183-49327184(-) m6A intron       27773535
chr17:49327191-49327192(-) m6A intron       27773535
chr17:49328344-49328345(-) m6A intron       27773535
chr17:49328360-49328361(-) m6A intron       27773535
chr17:49328381-49328382(-) m6A intron       27773535
chr17:49328394-49328395(-) m6A intron       27773535
chr17:49328440-49328441(-) m6A intron       27773535
chr17:49328450-49328451(-) m6A intron       27773535
chr17:49328547-49328548(-) m6A intron       27773535//22608085
chr17:49328560-49328561(-) m6A intron       27773535//22608085
chr17:49328596-49328597(-) m6A intron       27773535
chr17:49328645-49328646(-) m6A intron       27773535
chr17:49328650-49328651(-) m6A intron       27773535
chr17:49328703-49328704(-) m6A intron       27773535
chr17:49328711-49328712(-) m6A intron       27773535
chr17:49337208-49337209(-) m6A 5'UTR//intron       27773536
chr17:49337239-49337240(-) m6A 5'UTR//intron       27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-190a-5p
Exosome Hepatocellular carcinoma cell line (HepG2)|Lung epithelial carcinoma cell line (A549)     20615901
Exosome Brain tissue     23382797
Exosome Plasma     23663360
Exosome Plasma     24683445
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Hepatocellular carcinoma cell line (HepG2)|Lung epithelial carcinoma cell line (A549)     20615901
Microvesicle Colon cancer cell line (LIM1863)|Mesenchymal stem cells|Urine     -
MBTD1
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HCC cell line (HepG2)|K562 cells     -
Exosome Blood     -
Insoluble cytoplasm HCC cell line (HepG2)     -
Membrane HCC cell line (HepG2)|K562 cells     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-190a-5p
Interactor2: MBTD1

Evidence Support:


Weak-Evidence RNA-Seq
Prediction-Evidence DIANA-microT//miRDB//Targetscan
Support Database ViRBase

References:


PMID 31570108 Target region None
Source ViRBase Interactor1 expression None
Tissue or cell line ARPE-19 human RPE cells Interactor2 expression None
Description Table 1 List of miRNAs that were differentially expressed between EBOV- and mock-infected human RPE cells at 24 h post-infection.Putative target genes in EBOV-infected human RPE cells were predicted from the 15 highly differentially expressed miRNAs using algorithms: 2629 targets by Diana microT; 1799 targets by miRDB; and 14315 targets by TargetScan (Additional file 5).

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