Detail Information

Basic Information:


  VIRBase ID:  

HHID00004195

  Virus:  

Zaire ebolavirus (ZEBOV)

  Host:  

Homo sapiens

  Confidence Score:  

0.5711

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-190a-5p:           ATXN3:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-190a-5p ATXN3
miRBase
Accession/Entrez ID
MIMAT0000458 4287
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - AT3//ATX3//JOS//MJD//MJD1//SCA3

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-190a-5p
rs1018706777 chr15:62823984    A/G
rs1369926402 chr15:62823991    G/A
rs1555521311 chr15:62823990    G/C
rs755866868 chr15:62823986    A/G
rs766742872 chr15:62823990    GGTT/G
rs777464613 chr15:62823987    T/G
rs1228899174 chr15:62823974    T/A
rs1281303771 chr15:62823976    T/C
rs1350000299 chr15:62823972    G/A

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ATXN3
chr14:92528519(-) A-I      3'UTR
chr14:92528538(-) A-I      3'UTR
chr14:92531861(-) A-I      intronic
chr14:92531856(-) A-I      intronic
chr14:92531969(-) A-I      intronic
chr14:92535512(-) A-I      intronic
chr14:92541748(-) A-I      intronic
chr14:92541738(-) A-I      intronic
chr14:92526522(-) A-I      3'UTR
chr14:92535983(-) A-I      intronic
chr14:92535949(-) A-I      intronic
chr14:92535944(-) A-I      intronic
chr14:92535921(-) A-I      intronic
chr14:92535920(-) A-I      intronic
chr14:92535912(-) A-I      intronic
chr14:92535911(-) A-I      intronic
chr14:92525993(-) A-I      3'UTR
chr14:92526054(-) A-I      3'UTR
chr14:92526062(-) A-I      3'UTR
chr14:92526124(-) A-I      3'UTR
chr14:92526024(-) A-I      3'UTR
chr14:92526136(-) A-I      3'UTR
chr14:92526361(-) A-I      3'UTR
chr14:92526412(-) A-I      3'UTR
chr14:92526414(-) A-I      3'UTR
chr14:92526417(-) A-I      3'UTR
chr14:92535559(-) A-I      intronic
chr14:92531960(-) A-I      intronic
chr14:92526418(-) A-I      3'UTR
chr14:92526715(-) A-I      3'UTR
chr14:92526719(-) A-I      3'UTR
chr14:92526420(-) A-I      3'UTR
chr14:92528532(-) A-I      3'UTR
chr14:92526423(-) A-I      3'UTR
chr14:92526457(-) A-I      3'UTR
chr14:92526770(-) A-I      3'UTR
chr14:92526771(-) A-I      3'UTR
chr14:92526772(-) A-I      3'UTR
chr14:92526773(-) A-I      3'UTR
chr14:92526778(-) A-I      3'UTR
chr14:92526780(-) A-I      3'UTR
chr14:92526781(-) A-I      3'UTR
chr14:92527153(-) A-I      3'UTR
chr14:92535850(-) A-I      intronic
chr14:92535881(-) A-I      intronic
chr14:92545468(-) A-I      intronic
chr14:92527248(-) A-I      3'UTR
chr14:92526507(-) A-I      3'UTR
chr14:92527254(-) A-I      3'UTR
chr14:92527257(-) A-I      3'UTR
chr14:92527279(-) A-I      3'UTR
chr14:92527296(-) A-I      3'UTR
chr14:92527332(-) A-I      3'UTR
chr14:92528515(-) A-I      3'UTR
chr14:92528554(-) A-I      3'UTR
chr14:92537935(-) A-I      Syn:Thr->Thr
chr14:92558335(-) A-I      intronic
chr14:92547029(-) A-I      intronic
chr14:92545483(-) A-I      intronic
chr14:92545448(-) A-I      intronic
chr14:92564848(-) A-I      intronic
chr14:92545422(-) A-I      intronic
chr14:92545367(-) A-I      intronic
chr14:92563741(-) A-I      intronic
chr14:92553673(-) A-I      intronic
chr14:92545408(-) A-I      intronic
chr14:92545406(-) A-I      intronic
chr14:92545400(-) A-I      intronic
chr14:92545312(-) A-I      intronic
chr14:92545267(-) A-I      intronic
chr14:92544829(-) A-I      intronic
chr14:92542624(-) A-I      intronic
chr14:92544584(-) A-I      intronic
chr14:92544472(-) A-I      intronic
chr14:92544123(-) A-I      intronic
chr14:92535988(-) A-I      intronic
chr14:92543921(-) A-I      intronic
chr14:92543893(-) A-I      intronic
chr14:92562124(-) A-I      intronic
chr14:92541551(-) A-I      intronic
chr14:92543753(-) A-I      intronic
chr14:92553712(-) A-I      intronic
chr14:92542745(-) A-I      intronic
chr14:92566087(-) A-I      intronic
chr14:92542573(-) A-I      intronic
chr14:92542531(-) A-I      intronic
chr14:92541714(-) A-I      intronic
chr14:92541690(-) A-I      intronic
chr14:92541594(-) A-I      intronic
chr14:92541576(-) A-I      intronic
chr14:92541556(-) A-I      intronic
chr14:92539867(-) A-I      intronic
chr14:92539833(-) A-I      intronic
chr14:92537858(-) A-I      intronic
chr14:92537841(-) A-I      intronic
chr14:92536860(-) A-I      intronic
chr14:92556373(-) A-I      intronic
chr14:92536814(-) A-I      intronic
chr14:92536801(-) A-I      intronic
chr14:92536774(-) A-I      intronic
chr14:92536765(-) A-I      intronic
chr14:92552495(-) A-I      intronic
chr14:92556371(-) A-I      intronic
chr14:92536759(-) A-I      intronic
chr14:92536756(-) A-I      intronic
chr14:92536750(-) A-I      intronic
chr14:92536742(-) A-I      intronic
chr14:92536734(-) A-I      intronic
chr14:92536719(-) A-I      intronic
chr14:92536705(-) A-I      intronic
chr14:92536667(-) A-I      intronic
chr14:92536665(-) A-I      intronic
chr14:92536011(-) A-I      intronic
chr14:92535989(-) A-I      intronic
chr14:92535913(-) A-I      intronic
chr14:92535899(-) A-I      intronic
chr14:92535894(-) A-I      intronic
chr14:92535890(-) A-I      intronic
chr14:92535887(-) A-I      intronic
chr14:92535865(-) A-I      intronic
chr14:92535855(-) A-I      intronic
chr14:92535807(-) A-I      intronic
chr14:92535803(-) A-I      intronic
chr14:92535671(-) A-I      intronic
chr14:92535584(-) A-I      intronic
chr14:92535583(-) A-I      intronic
chr14:92535520(-) A-I      intronic
chr14:92535519(-) A-I      intronic
chr14:92535499(-) A-I      intronic
chr14:92535491(-) A-I      intronic
chr14:92535490(-) A-I      intronic
chr14:92535475(-) A-I      intronic
chr14:92535451(-) A-I      intronic
chr14:92535450(-) A-I      intronic
chr14:92535166(-) A-I      intronic
chr14:92535138(-) A-I      intronic
chr14:92535137(-) A-I      intronic
chr14:92569910(-) A-I      intronic
chr14:92535072(-) A-I      intronic
chr14:92535007(-) A-I      intronic
chr14:92554551(-) A-I      intronic
chr14:92534945(-) A-I      intronic
chr14:92534020(-) A-I      intronic
chr14:92534014(-) A-I      intronic
chr14:92535948(-) A-I      intronic
chr14:92544428(-) A-I      intronic
chr14:92533992(-) A-I      intronic
chr14:92543978(-) A-I      intronic
chr14:92541647(-) A-I      intronic
chr14:92533960(-) A-I      intronic
chr14:92533945(-) A-I      intronic
chr14:92533934(-) A-I      intronic
chr14:92533905(-) A-I      intronic
chr14:92533878(-) A-I      intronic
chr14:92533809(-) A-I      intronic
chr14:92533393(-) A-I      intronic
chr14:92533386(-) A-I      intronic
chr14:92533351(-) A-I      intronic
chr14:92570522(-) A-I      intronic
chr14:92533284(-) A-I      intronic
chr14:92533282(-) A-I      intronic
chr14:92533274(-) A-I      intronic
chr14:92533254(-) A-I      intronic
chr14:92533252(-) A-I      intronic
chr14:92544286(-) A-I      intronic
chr14:92533251(-) A-I      intronic
chr14:92533186(-) A-I      intronic
chr14:92533182(-) A-I      intronic
chr14:92562136(-) A-I      intronic
chr14:92533181(-) A-I      intronic
chr14:92532404(-) A-I      intronic
chr14:92532382(-) A-I      intronic
chr14:92532223(-) A-I      intronic
chr14:92532113(-) A-I      intronic
chr14:92532103(-) A-I      intronic
chr14:92532076(-) A-I      intronic
chr14:92532061(-) A-I      intronic
chr14:92532058(-) A-I      intronic
chr14:92531982(-) A-I      intronic
chr14:92531981(-) A-I      intronic
chr14:92531980(-) A-I      intronic
chr14:92531860(-) A-I      intronic
chr14:92547010(-) A-I      intronic
chr14:92544168(-) A-I      intronic
chr14:92531827(-) A-I      intronic
chr14:92558291(-) A-I      intronic
chr14:92552748(-) A-I      intronic
chr14:92558168(-) A-I      intronic
chr14:92564862(-) A-I      intronic
chr14:92551725(-) A-I      intronic
chr14:92541705(-) A-I      intronic
chr14:92537760(-) A-I      intronic
chr14:92544210(-) A-I      intronic
chr14:92557388(-) A-I      intronic
chr14:92564034(-) A-I      intronic
chr14:92559304(-) A-I      intronic
chr14:92554617(-) A-I      intronic
chr14:92564769(-) A-I      intronic
chr14:92552826(-) A-I      intronic
chr14:92552507(-) A-I      intronic
chr14:92563766(-) A-I      intronic
chr14:92557551(-) A-I      intronic
chr14:92571227(-) A-I      intronic
chr14:92571219(-) A-I      intronic
chr14:92571155(-) A-I      intronic
chr14:92571150(-) A-I      intronic
chr14:92571145(-) A-I      intronic
chr14:92571123(-) A-I      intronic
chr14:92571095(-) A-I      intronic
chr14:92571025(-) A-I      intronic
chr14:92545326(-) A-I      intronic
chr14:92570689(-) A-I      intronic
chr14:92570687(-) A-I      intronic
chr14:92570645(-) A-I      intronic
chr14:92570596(-) A-I      intronic
chr14:92570581(-) A-I      intronic
chr14:92569918(-) A-I      intronic
chr14:92569822(-) A-I      intronic
chr14:92566167(-) A-I      intronic
chr14:92565968(-) A-I      intronic
chr14:92564928(-) A-I      intronic
chr14:92564874(-) A-I      intronic
chr14:92564849(-) A-I      intronic
chr14:92564803(-) A-I      intronic
chr14:92564801(-) A-I      intronic
chr14:92564796(-) A-I      intronic
chr14:92564740(-) A-I      intronic
chr14:92564675(-) A-I      intronic
chr14:92564533(-) A-I      intronic
chr14:92564136(-) A-I      intronic
chr14:92564048(-) A-I      intronic
chr14:92564047(-) A-I      intronic
chr14:92564046(-) A-I      intronic
chr14:92564044(-) A-I      intronic
chr14:92564002(-) A-I      intronic
chr14:92563645(-) A-I      intronic
chr14:92563525(-) A-I      intronic
chr14:92563520(-) A-I      intronic
chr14:92562929(-) A-I      intronic
chr14:92562885(-) A-I      intronic
chr14:92562747(-) A-I      intronic
chr14:92562724(-) A-I      intronic
chr14:92562186(-) A-I      intronic
chr14:92561716(-) A-I      intronic
chr14:92561709(-) A-I      intronic
chr14:92561699(-) A-I      intronic
chr14:92559477(-) A-I      intronic
chr14:92559471(-) A-I      intronic
chr14:92559328(-) A-I      intronic
chr14:92558290(-) A-I      intronic
chr14:92558286(-) A-I      intronic
chr14:92558235(-) A-I      intronic
chr14:92558197(-) A-I      intronic
chr14:92558162(-) A-I      intronic
chr14:92557686(-) A-I      intronic
chr14:92557552(-) A-I      intronic
chr14:92557776(-) A-I      intronic
chr14:92557550(-) A-I      intronic
chr14:92556407(-) A-I      intronic
chr14:92562057(-) A-I      intronic
chr14:92570649(-) A-I      intronic
chr14:92555877(-) A-I      intronic
chr14:92555794(-) A-I      intronic
chr14:92554643(-) A-I      intronic
chr14:92554629(-) A-I      intronic
chr14:92543104(-) A-I      intronic
chr14:92544404(-) A-I      intronic
chr14:92554619(-) A-I      intronic
chr14:92554611(-) A-I      intronic
chr14:92554541(-) A-I      intronic
chr14:92552995(-) A-I      intronic
chr14:92554582(-) A-I      intronic
chr14:92552958(-) A-I      intronic
chr14:92552702(-) A-I      intronic
chr14:92552677(-) A-I      intronic
chr14:92552508(-) A-I      intronic
chr14:92552486(-) A-I      intronic
chr14:92551609(-) A-I      intronic
chr14:92551607(-) A-I      intronic
chr14:92527326(-) A-I      3'UTR
chr14:92526115(-) A-I      3'UTR
chr14:92526099(-) A-I      3'UTR
chr14:92526678(-) A-I      3'UTR
chr14:92528408(-) A-I      3'UTR
chr14:92526038(-) A-I      3'UTR
chr14:92527250(-) A-I      3'UTR
chr14:92527362(-) A-I      3'UTR
chr14:92528461(-) A-I      3'UTR
chr14:92526120(-) A-I      3'UTR
chr14:92526645(-) A-I      3'UTR
chr14:92526378(-) A-I      3'UTR
chr14:92526473(-) A-I      3'UTR
chr14:92526445(-) A-I      3'UTR
chr14:92526530(-) A-I      3'UTR
chr14:92527256(-) A-I      3'UTR
chr14:92526123(-) A-I      3'UTR
chr14:92527144(-) A-I      3'UTR
chr14:92526118(-) A-I      3'UTR
chr14:92528479(-) A-I      3'UTR
chr14:92527260(-) A-I      3'UTR
chr14:92526261(-) A-I      3'UTR
chr14:92527348(-) A-I      3'UTR
chr14:92526316(-) A-I      3'UTR
chr14:92526384(-) A-I      3'UTR
chr14:92527214(-) A-I      3'UTR
chr14:92525961(-) A-I      3'UTR
chr14:92527129(-) A-I      3'UTR
chr14:92527357(-) A-I      3'UTR
chr14:92526351(-) A-I      3'UTR
chr14:92528378(-) A-I      3'UTR
chr14:92528489(-) A-I      3'UTR
chr14:92526796(-) A-I      3'UTR
chr14:92526892(-) A-I      3'UTR
chr14:92526014(-) A-I      3'UTR
chr14:92525900(-) A-I      3'UTR
chr14:92526372(-) A-I      3'UTR
chr14:92526487(-) A-I      3'UTR
chr14:92526105(-) A-I      3'UTR
chr14:92526740(-) A-I      3'UTR
chr14:92526747(-) A-I      3'UTR
chr14:92526707(-) A-I      3'UTR
chr14:92526100(-) A-I      3'UTR
chr14:92526337(-) A-I      3'UTR
chr14:92528477(-) A-I      3'UTR
chr14:92526830(-) A-I      3'UTR
chr14:92526835(-) A-I      3'UTR
chr14:92528518(-) A-I      3'UTR
chr14:92526875(-) A-I      3'UTR
chr14:92526160(-) A-I      3'UTR
chr14:92527124(-) A-I      3'UTR
chr14:92526345(-) A-I      3'UTR
chr14:92526797(-) A-I      3'UTR
chr14:92526779(-) A-I      3'UTR
chr14:92527182(-) A-I      3'UTR
chr14:92525973(-) A-I      3'UTR
chr14:92526338(-) A-I      3'UTR
chr14:92526710(-) A-I      3'UTR
chr14:92526686(-) A-I      3'UTR
chr14:92527188(-) A-I      3'UTR
chr14:92527198(-) A-I      3'UTR
chr14:92526785(-) A-I      3'UTR
chr14:92527225(-) A-I      3'UTR
chr14:92527173(-) A-I      3'UTR
chr14:92556683(-) A-I      ncRNA
chr14:92556724(-) A-I      ncRNA
chr14:92556651(-) A-I      ncRNA
chr14:92547130(-) A-I      NonSyn:Arg->Gly
chr14:92547131(-) A-I      Syn:Pro->Pro
chr14:92557712(-) A-I      intronic
chr14:92551633(-) A-I      intronic
chr14:92541693(-) A-I      intronic
chr14:92545002(-) A-I      intronic
chr14:92555525(-) A-I      intronic
chr14:92541704(-) A-I      intronic
chr14:92570713(-) A-I      intronic
chr14:92563416(-) A-I      intronic
chr14:92554592(-) A-I      intronic
chr14:92564065(-) A-I      intronic
chr14:92557673(-) A-I      intronic
chr14:92539885(-) A-I      intronic
chr14:92556358(-) A-I      intronic
chr14:92542680(-) A-I      intronic
chr14:92564926(-) A-I      intronic
chr14:92553695(-) A-I      intronic
chr14:92566124(-) A-I      intronic
chr14:92545486(-) A-I      intronic
chr14:92552955(-) A-I      intronic
chr14:92545484(-) A-I      intronic
chr14:92564799(-) A-I      intronic
chr14:92552822(-) A-I      intronic
chr14:92562139(-) A-I      intronic
chr14:92552846(-) A-I      intronic
chr14:92547079(-) A-I      intronic
chr14:92560424(-) A-I      intronic
chr14:92544447(-) A-I      intronic
chr14:92567623(-) A-I      intronic
chr14:92569923(-) A-I      intronic
chr14:92535958(-) A-I      intronic
chr14:92537722(-) A-I      intronic
chr14:92538734(-) A-I      intronic
chr14:92560451(-) A-I      intronic
chr14:92558190(-) A-I      intronic
chr14:92558176(-) A-I      intronic
chr14:92552847(-) A-I      intronic
chr14:92545364(-) A-I      intronic
chr14:92541784(-) A-I      intronic
chr14:92543201(-) A-I      intronic
chr14:92564815(-) A-I      intronic
chr14:92552870(-) A-I      intronic
chr14:92560384(-) A-I      intronic
chr14:92544495(-) A-I      intronic
chr14:92561602(-) A-I      intronic
chr14:92536921(-) A-I      intronic
chr14:92557709(-) A-I      intronic
chr14:92557671(-) A-I      intronic
chr14:92554686(-) A-I      intronic
chr14:92562174(-) A-I      intronic
chr14:92558266(-) A-I      intronic
chr14:92558221(-) A-I      intronic
chr14:92551470(-) A-I      intronic
chr14:92552760(-) A-I      intronic
chr14:92545382(-) A-I      intronic
chr14:92562045(-) A-I      intronic
chr14:92571536(-) A-I      intronic
chr14:92558074(-) A-I      intronic
chr14:92563446(-) A-I      intronic
chr14:92551197(-) A-I      intronic
chr14:92560486(-) A-I      intronic
chr14:92566047(-) A-I      intronic
chr14:92543855(-) A-I      intronic
chr14:92557538(-) A-I      intronic
chr14:92544501(-) A-I      intronic
chr14:92557667(-) A-I      intronic
chr14:92552715(-) A-I      intronic
chr14:92544280(-) A-I      intronic
chr14:92551659(-) A-I      intronic
chr14:92570754(-) A-I      intronic
chr14:92562750(-) A-I      intronic
chr14:92564582(-) A-I      intronic
chr14:92535213(-) A-I      intronic
chr14:92544434(-) A-I      intronic
chr14:92551591(-) A-I      intronic
chr14:92547016(-) A-I      intronic
chr14:92551219(-) A-I      intronic
chr14:92535991(-) A-I      intronic
chr14:92564869(-) A-I      intronic
chr14:92566128(-) A-I      intronic
chr14:92545435(-) A-I      intronic
chr14:92545347(-) A-I      intronic
chr14:92570633(-) A-I      intronic
chr14:92545327(-) A-I      intronic
chr14:92560425(-) A-I      intronic
chr14:92537828(-) A-I      intronic
chr14:92551203(-) A-I      intronic
chr14:92552852(-) A-I      intronic
chr14:92541611(-) A-I      intronic
chr14:92557695(-) A-I      intronic
chr14:92569936(-) A-I      intronic
chr14:92554578(-) A-I      intronic
chr14:92568532(-) A-I      intronic
chr14:92537818(-) A-I      intronic
chr14:92570764(-) A-I      intronic
chr14:92552965(-) A-I      intronic
chr14:92556372(-) A-I      intronic
chr14:92558258(-) A-I      intronic
chr14:92552976(-) A-I      intronic
chr14:92554581(-) A-I      intronic
chr14:92544817(-) A-I      intronic
chr14:92563765(-) A-I      intronic
chr14:92541665(-) A-I      intronic
chr14:92543964(-) A-I      intronic
chr14:92535943(-) A-I      intronic
chr14:92556359(-) A-I      intronic
chr14:92537774(-) A-I      intronic
chr14:92551669(-) A-I      intronic
chr14:92558077(-) A-I      intronic
chr14:92556396(-) A-I      intronic
chr14:92545398(-) A-I      intronic
chr14:92557713(-) A-I      intronic
chr14:92552650(-) A-I      intronic
chr14:92564588(-) A-I      intronic
chr14:92532036(-) A-I      intronic
chr14:92545350(-) A-I      intronic
chr14:92526840(-) A-I      3'UTR
chr14:92527106(-) A-I      3'UTR
chr14:92526368(-) A-I      3'UTR
chr14:92526727(-) A-I      3'UTR
chr14:92528463(-) A-I      3'UTR
chr14:92526011(-) A-I      3'UTR
chr14:92526305(-) A-I      3'UTR
chr14:92526821(-) A-I      3'UTR
chr14:92526050(-) A-I      3'UTR
chr14:92525920(-) A-I      3'UTR
chr14:92528355(-) A-I      3'UTR
chr14:92527349(-) A-I      3'UTR
chr14:92526292(-) A-I      3'UTR
chr14:92525921(-) A-I      3'UTR
chr14:92526080(-) A-I      3'UTR
chr14:92525998(-) A-I      3'UTR
chr14:92526806(-) A-I      3'UTR
chr14:92527244(-) A-I      3'UTR
chr14:92527266(-) A-I      3'UTR
chr14:92527241(-) A-I      3'UTR
chr14:92526079(-) A-I      3'UTR
chr14:92526782(-) A-I      3'UTR
chr14:92526377(-) A-I      3'UTR
chr14:92527245(-) A-I      3'UTR
chr14:92527205(-) A-I      3'UTR
chr14:92526416(-) A-I      3'UTR
chr14:92525995(-) A-I      3'UTR
chr14:92526444(-) A-I      3'UTR
chr14:92525960(-) A-I      3'UTR
chr14:92525890(-) A-I      3'UTR
chr14:92527162(-) A-I      3'UTR
chr14:92527271(-) A-I      3'UTR
chr14:92526277(-) A-I      3'UTR
chr14:92528435(-) A-I      3'UTR
chr14:92526514(-) A-I      3'UTR
chr14:92526478(-) A-I      3'UTR
chr14:92526819(-) A-I      3'UTR
chr14:92528452(-) A-I      3'UTR
chr14:92526126(-) A-I      3'UTR
chr14:92527310(-) A-I      3'UTR
chr14:92526040(-) A-I      3'UTR
chr14:92527174(-) A-I      3'UTR
chr14:92527215(-) A-I      3'UTR
chr14:92527281(-) A-I      3'UTR
chr14:92528343(-) A-I      3'UTR
chr14:92526822(-) A-I      3'UTR
chr14:92526396(-) A-I      3'UTR
chr14:92526695(-) A-I      3'UTR
chr14:92527246(-) A-I      3'UTR
chr14:92526472(-) A-I      3'UTR
chr14:92528584(-) A-I      3'UTR
chr14:92525908(-) A-I      3'UTR
chr14:92525948(-) A-I      3'UTR
chr14:92526400(-) A-I      3'UTR
chr14:92528444(-) A-I      3'UTR
chr14:92525943(-) A-I      3'UTR
chr14:92527247(-) A-I      3'UTR
chr14:92526647(-) A-I      3'UTR
chr14:92526702(-) A-I      3'UTR
chr14:92525892(-) A-I      3'UTR
chr14:92527313(-) A-I      3'UTR
chr14:92526053(-) A-I      3'UTR
chr14:92527209(-) A-I      3'UTR
chr14:92528541(-) A-I      3'UTR
chr14:92526336(-) A-I      3'UTR
chr14:92525962(-) A-I      3'UTR
chr14:92526513(-) A-I      3'UTR
chr14:92527192(-) A-I      3'UTR
chr14:92526741(-) A-I      3'UTR
chr14:92526278(-) A-I      3'UTR
chr14:92527110(-) A-I      3'UTR
chr14:92526639(-) A-I      3'UTR
chr14:92526149(-) A-I      3'UTR
chr14:92526776(-) A-I      3'UTR
chr14:92528337(-) A-I      3'UTR
chr14:92526022(-) A-I      3'UTR
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED ATXN3
chr14:92558190(-) A-I intron -    22327324
chr14:92525948(-) A-I exon 3'UTR    21960545
chr14:92525995(-) A-I exon 3'UTR    21960545
chr14:92526040(-) A-I exon 3'UTR    21960545
chr14:92526115(-) A-I exon 3'UTR    21960545
chr14:92526338(-) A-I exon 3'UTR    21960545
chr14:92526368(-) A-I exon 3'UTR    21960545
chr14:92525900(-) A-I exon 3'UTR    21960545
chr14:92527362(-) A-I exon 3'UTR    21960545
chr14:92557667(-) A-I intron -    21960545
chr14:92525948(-) A-G exon 3'UTR    21725310
chr14:92527241(-) A-G exon 3'UTR    21725310   //22484847
chr14:92527362(-) A-G exon 3'UTR    21725310   //22484847
chr14:92525962(-) A-G exon 3'UTR    22484847
chr14:92526126(-) A-G exon 3'UTR    22484847
chr14:92526472(-) A-G exon 3'UTR    22484847
chr14:92526707(-) A-G exon 3'UTR    22484847
chr14:92527214(-) A-G exon 3'UTR    22484847
chr14:92527271(-) A-G exon 3'UTR    22484847
chr14:92527350(-) T-C exon 3'UTR    22484847
chr14:92551669(-) A-G intron -    22484847
chr14:92556372(-) A-G intron -    22484847
chr14:92556373(-) A-G intron -    22484847
chr14:92556683(-) A-G intron -    22484847
chr14:92557712(-) A-G intron -    22484847
chr14:92557713(-) A-G intron -    22484847
chr14:92558190(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ATXN3
chr14:92505638-92505639(-) m6A 3'UTR       -
chr14:92505801-92505802(-) m6A 3'UTR       -
chr14:92505851-92505852(-) m6A 3'UTR       -
chr14:92505934-92505935(-) m6A 3'UTR       -
chr14:92506157-92506158(-) m6A 3'UTR       24284625
chr14:92506181-92506182(-) m6A 3'UTR       24284625
chr14:92506334-92506335(-) m6A 3'UTR       24284625//25456834//24981863//22608085
chr14:92506455-92506456(-) m6A 3'UTR       -
chr14:92506655-92506656(-) m6A 3'UTR       -
chr14:92506699-92506700(-) m6A 3'UTR       -
chr14:92506917-92506918(-) m6A 3'UTR       -
chr14:92511250-92511251(-) m6A 3'UTR//exon       27773535
chr14:92511283-92511284(-) m6A 3'UTR//exon       27773535
chr14:92514281-92514282(-) m6A 3'UTR//exon//intron       27773535
chr14:92514316-92514317(-) m6A 3'UTR//exon//intron       27773535
chr14:92530448-92530449(-) m6A 3'UTR//intron       24981863//27773535//22608085
chr14:92530500-92530501(-) m6A 3'UTR//intron       24981863//27773535//22608085
chr14:92530519-92530520(-) m6A 3'UTR//intron       24981863//27773535//22608085
chr14:92530540-92530541(-) m6A 3'UTR//intron       24981863//27773535//22608085
chr14:92530558-92530559(-) m6A 3'UTR//intron       24981863//27773535//22608085
chr14:92547369-92547370(-) m6A 3'UTR//CDS//exon//intron       24209618
chr14:92547392-92547393(-) m6A 3'UTR//CDS//exon//intron       24209618
chr14:92572897-92572898(-) m6A 5'UTR//exon       24981863
chr14:92572905-92572906(-) m6A 5'UTR//exon       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-190a-5p
Exosome Hepatocellular carcinoma cell line (HepG2)|Lung epithelial carcinoma cell line (A549)     20615901
Exosome Brain tissue     23382797
Exosome Plasma     23663360
Exosome Plasma     24683445
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Hepatocellular carcinoma cell line (HepG2)|Lung epithelial carcinoma cell line (A549)     20615901
Microvesicle Colon cancer cell line (LIM1863)|Mesenchymal stem cells|Urine     -
ATXN3
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Exosome Blood     -
Nucleus Nasopharyngeal carcinoma cells     20498841
Nucleus Nasopharyngeal carcinoma cells     20498841
Nucleus Nasopharyngeal carcinoma cells     20498841
Nucleus Nasopharyngeal carcinoma cells     20498841
Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-190a-5p
Interactor2: ATXN3

Evidence Support:


Weak-Evidence RNA-Seq
Prediction-Evidence miRDB
Support Database ViRBase

References:


PMID 31570108 Target region None
Source ViRBase Interactor1 expression None
Tissue or cell line ARPE-19 human RPE cells Interactor2 expression None
Description Table 1 List of miRNAs that were differentially expressed between EBOV- and mock-infected human RPE cells at 24 h post-infection.Putative target genes in EBOV-infected human RPE cells were predicted from the 15 highly differentially expressed miRNAs using algorithms: 2629 targets by Diana microT; 1799 targets by miRDB; and 14315 targets by TargetScan (Additional file 5).

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