Detail Information

Basic Information:


  VIRBase ID:  

HHID00004008

  Virus:  

Zaire ebolavirus (ZEBOV)

  Host:  

Homo sapiens

  Confidence Score:  

0.5711

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-190a-5p:           CACNB4:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-190a-5p CACNB4
miRBase
Accession/Entrez ID
MIMAT0000458 785
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - CAB4//CACNLB4//EA5//EIG9//EJM//EJM4//EJM6

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-190a-5p
rs1018706777 chr15:62823984    A/G
rs1369926402 chr15:62823991    G/A
rs1555521311 chr15:62823990    G/C
rs755866868 chr15:62823986    A/G
rs766742872 chr15:62823990    GGTT/G
rs777464613 chr15:62823987    T/G
rs1228899174 chr15:62823974    T/A
rs1281303771 chr15:62823976    T/C
rs1350000299 chr15:62823972    G/A

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR CACNB4
chr2:152863082(-) A-I      intronic
chr2:152863075(-) A-I      intronic
chr2:152863061(-) A-I      intronic
chr2:152823783(-) A-I      intronic
chr2:152823773(-) A-I      intronic
chr2:152823766(-) A-I      intronic
chr2:152797888(-) A-I      intronic
chr2:152718221(-) A-I      intronic
chr2:152718131(-) A-I      intronic
chr2:152863053(-) A-I      intronic
chr2:152863059(-) A-I      intronic
chr2:152911666(-) A-I      intronic
chr2:152911730(-) A-I      intronic
chr2:152801089(-) A-I      intronic
chr2:152801151(-) A-I      intronic
chr2:152801223(-) A-I      intronic
chr2:152801920(-) A-I      intronic
chr2:152801938(-) A-I      intronic
chr2:152802000(-) A-I      intronic
chr2:152802053(-) A-I      intronic
chr2:152802070(-) A-I      intronic
chr2:152802671(-) A-I      intronic
chr2:152802686(-) A-I      intronic
chr2:152804956(-) A-I      intronic
chr2:152912763(-) A-I      intronic
chr2:152912775(-) A-I      intronic
chr2:152920991(-) A-I      intronic
chr2:152921032(-) A-I      intronic
chr2:152921033(-) A-I      intronic
chr2:152921709(-) A-I      intronic
chr2:152922298(-) A-I      intronic
chr2:152926481(-) A-I      intronic
chr2:152926521(-) A-I      intronic
chr2:152929185(-) A-I      intronic
chr2:152929217(-) A-I      intronic
chr2:152932784(-) A-I      intronic
chr2:152935679(-) A-I      intronic
chr2:152935747(-) A-I      intronic
chr2:152935786(-) A-I      intronic
chr2:152935797(-) A-I      intronic
chr2:152935875(-) A-I      intronic
chr2:152936803(-) A-I      intronic
chr2:152936872(-) A-I      intronic
chr2:152936881(-) A-I      intronic
chr2:152936908(-) A-I      intronic
chr2:152937961(-) A-I      intronic
chr2:152941200(-) A-I      intronic
chr2:152941343(-) A-I      intronic
chr2:152943811(-) A-I      intronic
chr2:152943818(-) A-I      intronic
chr2:152943824(-) A-I      intronic
chr2:152943834(-) A-I      intronic
chr2:152943838(-) A-I      intronic
chr2:152943846(-) A-I      intronic
chr2:152944347(-) A-I      intronic
chr2:152944352(-) A-I      intronic
chr2:152944353(-) A-I      intronic
chr2:152944397(-) A-I      intronic
chr2:152947471(-) A-I      intronic
chr2:152947475(-) A-I      intronic
chr2:152947482(-) A-I      intronic
chr2:152948105(-) A-I      intronic
chr2:152952333(-) A-I      intronic
chr2:152952334(-) A-I      intronic
chr2:152952338(-) A-I      intronic
chr2:152952344(-) A-I      intronic
chr2:152952384(-) A-I      intronic
chr2:152952768(-) A-I      intronic
chr2:152952881(-) A-I      intronic
chr2:152883709(-) A-I      intronic
chr2:152871771(-) A-I      intronic
chr2:152884222(-) A-I      intronic
chr2:152884248(-) A-I      intronic
chr2:152884254(-) A-I      intronic
chr2:152884284(-) A-I      intronic
chr2:152889324(-) A-I      intronic
chr2:152889344(-) A-I      intronic
chr2:152889416(-) A-I      intronic
chr2:152889421(-) A-I      intronic
chr2:152889422(-) A-I      intronic
chr2:152892882(-) A-I      intronic
chr2:152892899(-) A-I      intronic
chr2:152892911(-) A-I      intronic
chr2:152892924(-) A-I      intronic
chr2:152892935(-) A-I      intronic
chr2:152892946(-) A-I      intronic
chr2:152881487(-) A-I      intronic
chr2:152806399(-) A-I      intronic
chr2:152806357(-) A-I      intronic
chr2:152805093(-) A-I      intronic
chr2:152823736(-) A-I      intronic
chr2:152880737(-) A-I      intronic
chr2:152823758(-) A-I      intronic
chr2:152823812(-) A-I      intronic
chr2:152850344(-) A-I      intronic
chr2:152850494(-) A-I      intronic
chr2:152850567(-) A-I      intronic
chr2:152850569(-) A-I      intronic
chr2:152850578(-) A-I      intronic
chr2:152850952(-) A-I      intronic
chr2:152851059(-) A-I      intronic
chr2:152851061(-) A-I      intronic
chr2:152851163(-) A-I      intronic
chr2:152852123(-) A-I      intronic
chr2:152852160(-) A-I      intronic
chr2:152852161(-) A-I      intronic
chr2:152853910(-) A-I      intronic
chr2:152880725(-) A-I      intronic
chr2:152871123(-) A-I      intronic
chr2:152870835(-) A-I      intronic
chr2:152870814(-) A-I      intronic
chr2:152870678(-) A-I      intronic
chr2:152865697(-) A-I      intronic
chr2:152865055(-) A-I      intronic
chr2:152864971(-) A-I      intronic
chr2:152864922(-) A-I      intronic
chr2:152806479(-) A-I      intronic
chr2:152819566(-) A-I      intronic
chr2:152819579(-) A-I      intronic
chr2:152819637(-) A-I      intronic
chr2:152819702(-) A-I      intronic
chr2:152819766(-) A-I      intronic
chr2:152819780(-) A-I      intronic
chr2:152823638(-) A-I      intronic
chr2:152852054(-) A-I      intronic
chr2:152864861(-) A-I      intronic
chr2:152882934(-) A-I      intronic
chr2:152864550(-) A-I      intronic
chr2:152864383(-) A-I      intronic
chr2:152860609(-) A-I      intronic
chr2:152860580(-) A-I      intronic
chr2:152859877(-) A-I      intronic
chr2:152853936(-) A-I      intronic
chr2:152853926(-) A-I      intronic
chr2:152750029(-) A-I      intronic
chr2:152759823(-) A-I      intronic
chr2:152774250(-) A-I      intronic
chr2:152774263(-) A-I      intronic
chr2:152774264(-) A-I      intronic
chr2:152774297(-) A-I      intronic
chr2:152892951(-) A-I      intronic
chr2:152892974(-) A-I      intronic
chr2:152893046(-) A-I      intronic
chr2:152776866(-) A-I      intronic
chr2:152776871(-) A-I      intronic
chr2:152895803(-) A-I      intronic
chr2:152895809(-) A-I      intronic
chr2:152776873(-) A-I      intronic
chr2:152805003(-) A-I      intronic
chr2:152776909(-) A-I      intronic
chr2:152780821(-) A-I      intronic
chr2:152797858(-) A-I      intronic
chr2:152797861(-) A-I      intronic
chr2:152800804(-) A-I      intronic
chr2:152895815(-) A-I      intronic
chr2:152895847(-) A-I      intronic
chr2:152897084(-) A-I      intronic
chr2:152897088(-) A-I      intronic
chr2:152900000(-) A-I      intronic
chr2:152900548(-) A-I      intronic
chr2:152900922(-) A-I      intronic
chr2:152908857(-) A-I      intronic
chr2:152908927(-) A-I      intronic
chr2:152908986(-) A-I      intronic
chr2:152909003(-) A-I      intronic
chr2:152909012(-) A-I      intronic
chr2:152909064(-) A-I      intronic
chr2:152909352(-) A-I      intronic
chr2:152909372(-) A-I      intronic
chr2:152909374(-) A-I      intronic
chr2:152909379(-) A-I      intronic
chr2:152909384(-) A-I      intronic
chr2:152909414(-) A-I      intronic
chr2:152909449(-) A-I      intronic
chr2:152911664(-) A-I      intronic
chr2:152880617(-) A-I      intronic
chr2:152880613(-) A-I      intronic
chr2:152880113(-) A-I      intronic
chr2:152880086(-) A-I      intronic
chr2:152880034(-) A-I      intronic
chr2:152875256(-) A-I      intronic
chr2:152700111(-) A-I      intronic
chr2:152718138(-) A-I      intronic
chr2:152718139(-) A-I      intronic
chr2:152718152(-) A-I      intronic
chr2:152718165(-) A-I      intronic
chr2:152718275(-) A-I      intronic
chr2:152745077(-) A-I      intronic
chr2:152875209(-) A-I      intronic
chr2:152875208(-) A-I      intronic
chr2:152875099(-) A-I      intronic
chr2:152874140(-) A-I      intronic
chr2:152874122(-) A-I      intronic
chr2:152871900(-) A-I      intronic
chr2:152871846(-) A-I      intronic
chr2:152871826(-) A-I      intronic
chr2:152871822(-) A-I      intronic
chr2:152871815(-) A-I      intronic
chr2:152871785(-) A-I      intronic
chr2:152871784(-) A-I      intronic
chr2:152871775(-) A-I      intronic
chr2:152932733(-) A-I      intronic
chr2:152932793(-) A-I      intronic
chr2:152802022(-) A-I      intronic
chr2:152865006(-) A-I      intronic
chr2:152882996(-) A-I      intronic
chr2:152738841(-) A-I      intronic
chr2:152904154(-) A-I      intronic
chr2:152875134(-) A-I      intronic
chr2:152912620(-) A-I      intronic
chr2:152880715(-) A-I      intronic
chr2:152897182(-) A-I      intronic
chr2:152719836(-) A-I      intronic
chr2:152800767(-) A-I      intronic
chr2:152797863(-) A-I      intronic
chr2:152850349(-) A-I      intronic
chr2:152911821(-) A-I      intronic
chr2:152904301(-) A-I      intronic
chr2:152875201(-) A-I      intronic
chr2:152850531(-) A-I      intronic
chr2:152900555(-) A-I      intronic
chr2:152910130(-) A-I      intronic
chr2:152907561(-) A-I      intronic
chr2:152850680(-) A-I      intronic
chr2:152812202(-) A-I      intronic
chr2:152911604(-) A-I      intronic
chr2:152938000(-) A-I      intronic
chr2:152797869(-) A-I      intronic
chr2:152851123(-) A-I      intronic
chr2:152936800(-) A-I      intronic
chr2:152822959(-) A-I      intronic
chr2:152805169(-) A-I      intronic
chr2:152735356(-) A-I      intronic
chr2:152944346(-) A-I      intronic
chr2:152860480(-) A-I      intronic
chr2:152719717(-) A-I      intronic
chr2:152865674(-) A-I      intronic
chr2:152774267(-) A-I      intronic
chr2:152819779(-) A-I      intronic
chr2:152880721(-) A-I      intronic
chr2:152776997(-) A-I      intronic
chr2:152850889(-) A-I      intronic
chr2:152800827(-) A-I      intronic
chr2:152874619(-) A-I      intronic
chr2:152800671(-) A-I      intronic
chr2:152907147(-) A-I      intronic
chr2:152911654(-) A-I      intronic
chr2:152920930(-) A-I      intronic
chr2:152776928(-) A-I      intronic
chr2:152822974(-) A-I      intronic
chr2:152789332(-) A-I      intronic
chr2:152870988(-) A-I      intronic
chr2:152805080(-) A-I      intronic
chr2:152877596(-) A-I      intronic
chr2:152802078(-) A-I      intronic
chr2:152921895(-) A-I      intronic
chr2:152909081(-) A-I      intronic
chr2:152851394(-) A-I      intronic
chr2:152805099(-) A-I      intronic
chr2:152759911(-) A-I      intronic
chr2:152905789(-) A-I      intronic
chr2:152910166(-) A-I      intronic
chr2:152860487(-) A-I      intronic
chr2:152952886(-) A-I      intronic
chr2:152759835(-) A-I      intronic
chr2:152870613(-) A-I      intronic
chr2:152932767(-) A-I      intronic
chr2:152864994(-) A-I      intronic
chr2:152883585(-) A-I      intronic
chr2:152860629(-) A-I      intronic
chr2:152860571(-) A-I      intronic
chr2:152801114(-) A-I      intronic
chr2:152801926(-) A-I      intronic
chr2:152822932(-) A-I      intronic
chr2:152883166(-) A-I      intronic
chr2:152889356(-) A-I      intronic
chr2:152904361(-) A-I      intronic
chr2:152757792(-) A-I      intronic
chr2:152864397(-) A-I      intronic
chr2:152778998(-) A-I      intronic
chr2:152941221(-) A-I      intronic
chr2:152897076(-) A-I      intronic
chr2:152874414(-) A-I      intronic
chr2:152889235(-) A-I      intronic
chr2:152850854(-) A-I      intronic
chr2:152934064(-) A-I      intronic
chr2:152937916(-) A-I      intronic
chr2:152850925(-) A-I      intronic
chr2:152870695(-) A-I      intronic
chr2:152819750(-) A-I      intronic
chr2:152952754(-) A-I      intronic
chr2:152864559(-) A-I      intronic
chr2:152804982(-) A-I      intronic
chr2:152952361(-) A-I      intronic
chr2:152780682(-) A-I      intronic
chr2:152870801(-) A-I      intronic
chr2:152852939(-) A-I      intronic
chr2:152864965(-) A-I      intronic
chr2:152864382(-) A-I      intronic
chr2:152911729(-) A-I      intronic
chr2:152921786(-) A-I      intronic
chr2:152757583(-) A-I      intronic
chr2:152860607(-) A-I      intronic
chr2:152777547(-) A-I      intronic
chr2:152897058(-) A-I      intronic
chr2:152952325(-) A-I      intronic
chr2:152900905(-) A-I      intronic
chr2:152864459(-) A-I      intronic
chr2:152900872(-) A-I      intronic
chr2:152812333(-) A-I      intronic
chr2:152703872(-) A-I      intronic
chr2:152850261(-) A-I      intronic
chr2:152819704(-) A-I      intronic
chr2:152801144(-) A-I      intronic
chr2:152936152(-) A-I      intronic
chr2:152864388(-) A-I      intronic
chr2:152812321(-) A-I      intronic
chr2:152907130(-) A-I      intronic
chr2:152920928(-) A-I      intronic
chr2:152703236(-) A-I      intronic
chr2:152864903(-) A-I      intronic
chr2:152909237(-) A-I      intronic
chr2:152759865(-) A-I      intronic
chr2:152777000(-) A-I      intronic
chr2:152936217(-) A-I      intronic
chr2:152823624(-) A-I      intronic
chr2:152952362(-) A-I      intronic
chr2:152875160(-) A-I      intronic
chr2:152706063(-) A-I      intronic
chr2:152789261(-) A-I      intronic
chr2:152738814(-) A-I      intronic
chr2:152934201(-) A-I      intronic
chr2:152909479(-) A-I      intronic
chr2:152850894(-) A-I      intronic
chr2:152718208(-) A-I      intronic
chr2:152880649(-) A-I      intronic
chr2:152818154(-) A-I      intronic
chr2:152853924(-) A-I      intronic
chr2:152870749(-) A-I      intronic
chr2:152860419(-) A-I      intronic
chr2:152941284(-) A-I      intronic
chr2:152812267(-) A-I      intronic
chr2:152758710(-) A-I      intronic
chr2:152895878(-) A-I      intronic
chr2:152936178(-) A-I      intronic
chr2:152921815(-) A-I      intronic
chr2:152935692(-) A-I      intronic
chr2:152904350(-) A-I      intronic
chr2:152909004(-) A-I      intronic
chr2:152811650(-) A-I      intronic
chr2:152935770(-) A-I      intronic
chr2:152864911(-) A-I      intronic
chr2:152865623(-) A-I      intronic
chr2:152909075(-) A-I      intronic
chr2:152864354(-) A-I      intronic
chr2:152936930(-) A-I      intronic
chr2:152941192(-) A-I      intronic
chr2:152750028(-) A-I      intronic
chr2:152917743(-) A-I      intronic
chr2:152909103(-) A-I      intronic
chr2:152859791(-) A-I      intronic
chr2:152864553(-) A-I      intronic
chr2:152806450(-) A-I      intronic
chr2:152850860(-) A-I      intronic
chr2:152703251(-) A-I      intronic
chr2:152797907(-) A-I      intronic
chr2:152905946(-) A-I      intronic
chr2:152884217(-) A-I      intronic
chr2:152918304(-) A-I      intronic
chr2:152777533(-) A-I      intronic
chr2:152889352(-) A-I      intronic
chr2:152936747(-) A-I      intronic
chr2:152875148(-) A-I      intronic
chr2:152909470(-) A-I      intronic
chr2:152870994(-) A-I      intronic
chr2:152703728(-) A-I      intronic
chr2:152905872(-) A-I      intronic
chr2:152800667(-) A-I      intronic
chr2:152703755(-) A-I      intronic
chr2:152776961(-) A-I      intronic
chr2:152897080(-) A-I      intronic
chr2:152852201(-) A-I      intronic
chr2:152935741(-) A-I      intronic
chr2:152864400(-) A-I      intronic
chr2:152703205(-) A-I      intronic
chr2:152864353(-) A-I      intronic
chr2:152719647(-) A-I      intronic
chr2:152911798(-) A-I      intronic
chr2:152874620(-) A-I      intronic
chr2:152952298(-) A-I      intronic
chr2:152891882(-) A-I      intronic
chr2:152910202(-) A-I      intronic
chr2:152865610(-) A-I      intronic
chr2:152932948(-) A-I      intronic
chr2:152807479(-) A-I      intronic
chr2:152812150(-) A-I      intronic
chr2:152900863(-) A-I      intronic
chr2:152850591(-) A-I      intronic
chr2:152852950(-) A-I      intronic
chr2:152812299(-) A-I      intronic
chr2:152880216(-) A-I      intronic
chr2:152800640(-) A-I      intronic
chr2:152909080(-) A-I      intronic
chr2:152889259(-) A-I      intronic
chr2:152797892(-) A-I      intronic
chr2:152935874(-) A-I      intronic
chr2:152864487(-) A-I      intronic
chr2:152889282(-) A-I      intronic
chr2:152775861(-) A-I      intronic
chr2:152806393(-) A-I      intronic
chr2:152908893(-) A-I      intronic
chr2:152910311(-) A-I      intronic
chr2:152952753(-) A-I      intronic
chr2:152922354(-) A-I      intronic
chr2:152749823(-) A-I      intronic
chr2:152823082(-) A-I      intronic
chr2:152880186(-) A-I      intronic
chr2:152952304(-) A-I      intronic
chr2:152875096(-) A-I      intronic
chr2:152936819(-) A-I      intronic
chr2:152859735(-) A-I      intronic
chr2:152941216(-) A-I      intronic
chr2:152880612(-) A-I      intronic
chr2:152800777(-) A-I      intronic
chr2:152929293(-) A-I      intronic
chr2:152941411(-) A-I      intronic
chr2:152800826(-) A-I      intronic
chr2:152776975(-) A-I      intronic
chr2:152812304(-) A-I      intronic
chr2:152806390(-) A-I      intronic
chr2:152850252(-) A-I      intronic
chr2:152907191(-) A-I      intronic
chr2:152776952(-) A-I      intronic
chr2:152776929(-) A-I      intronic
chr2:152850993(-) A-I      intronic
chr2:152806344(-) A-I      intronic
chr2:152850520(-) A-I      intronic
chr2:152850924(-) A-I      intronic
chr2:152870612(-) A-I      intronic
chr2:152921734(-) A-I      intronic
chr2:152804918(-) A-I      intronic
chr2:152880780(-) A-I      intronic
chr2:152877510(-) A-I      intronic
chr2:152850812(-) A-I      intronic
chr2:152852080(-) A-I      intronic
chr2:152952303(-) A-I      intronic
chr2:152883600(-) A-I      intronic
chr2:152904291(-) A-I      intronic
chr2:152927552(-) A-I      intronic
chr2:152882991(-) A-I      intronic
chr2:152893088(-) A-I      intronic
chr2:152908968(-) A-I      intronic
chr2:152822988(-) A-I      intronic
chr2:152800712(-) A-I      intronic
chr2:152908951(-) A-I      intronic
chr2:152932794(-) A-I      intronic
chr2:152911591(-) A-I      intronic
chr2:152850498(-) A-I      intronic
chr2:152927420(-) A-I      intronic
chr2:152850898(-) A-I      intronic
chr2:152822970(-) A-I      intronic
chr2:152797878(-) A-I      intronic
chr2:152936814(-) A-I      intronic
chr2:152811660(-) A-I      intronic
chr2:152910334(-) A-I      intronic
chr2:152932777(-) A-I      intronic
chr2:152909494(-) A-I      intronic
chr2:152921816(-) A-I      intronic
chr2:152874139(-) A-I      intronic
chr2:152865046(-) A-I      intronic
chr2:152698877(-) A-I      intronic
chr2:152800625(-) A-I      intronic
chr2:152884283(-) A-I      intronic
chr2:152936128(-) A-I      intronic
chr2:152757652(-) A-I      intronic
chr2:152703673(-) A-I      intronic
chr2:152859851(-) A-I      intronic
chr2:152785385(-) A-I      intronic
chr2:152908990(-) A-I      intronic
chr2:152805011(-) A-I      intronic
chr2:152718234(-) A-I      intronic
chr2:152864423(-) A-I      intronic
chr2:152850600(-) A-I      intronic
chr2:152812162(-) A-I      intronic
chr2:152699028(-) A-I      intronic
chr2:152823829(-) A-I      intronic
chr2:152802339(-) A-I      intronic
chr2:152908921(-) A-I      intronic
chr2:152823654(-) A-I      intronic
chr2:152952423(-) A-I      intronic
chr2:152936117(-) A-I      intronic
chr2:152937946(-) A-I      intronic
chr2:152905852(-) A-I      intronic
chr2:152907499(-) A-I      intronic
chr2:152937994(-) A-I      intronic
chr2:152952372(-) A-I      intronic
chr2:152758624(-) A-I      intronic
chr2:152909249(-) A-I      intronic
chr2:152907135(-) A-I      intronic
chr2:152889346(-) A-I      intronic
chr2:152905843(-) A-I      intronic
chr2:152807707(-) A-I      intronic
chr2:152936055(-) A-I      intronic
chr2:152935681(-) A-I      intronic
chr2:152800654(-) A-I      intronic
chr2:152929287(-) A-I      intronic
chr2:152909011(-) A-I      intronic
chr2:152874484(-) A-I      intronic
chr2:152850350(-) A-I      intronic
chr2:152908972(-) A-I      intronic
chr2:152864359(-) A-I      intronic
chr2:152859740(-) A-I      intronic
chr2:152791159(-) A-I      intronic
chr2:152910237(-) A-I      intronic
chr2:152804912(-) A-I      intronic
chr2:152880709(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED CACNB4
chr2:152864338(-) A-I intron -    15342557
chr2:152864353(-) A-I intron -    15342557
chr2:152864354(-) A-I intron -    15342557
chr2:152864358(-) A-I intron -    15342557
chr2:152864359(-) A-I intron -    15342557
chr2:152864382(-) A-I intron -    15342557
chr2:152864388(-) A-I intron -    15342557
chr2:152864397(-) A-I intron -    15342557
chr2:152864400(-) A-I intron -    15342557
chr2:152864410(-) A-I intron -    15342557
chr2:152864423(-) A-I intron -    15342557
chr2:152864424(-) A-I intron -    15342557
chr2:152864434(-) A-I intron -    15342557
chr2:152864450(-) A-I intron -    15342557
chr2:152864461(-) A-I intron -    15342557   //15258596
chr2:152864487(-) A-I intron -    15342557   //15258596
chr2:152864489(-) A-I intron -    15342557   //15258596
chr2:152864499(-) A-I intron -    15342557   //15258596
chr2:152864903(-) A-I intron -    15342557
chr2:152703205(-) A-G intron -    22484847
chr2:152703703(-) T-C intron -    22484847
chr2:152765965(-) T-G intron -    22484847
chr2:152778998(-) A-G intron -    22484847
chr2:152791336(-) A-G intron -    22484847
chr2:152800671(-) A-G intron -    22484847
chr2:152800712(-) A-G intron -    22484847
chr2:152800826(-) A-G intron -    22484847
chr2:152801114(-) A-G intron -    22484847
chr2:152801926(-) A-G intron -    22484847
chr2:152801993(-) A-G intron -    22484847
chr2:152802022(-) A-G intron -    22484847
chr2:152802049(-) A-G intron -    22484847
chr2:152804971(-) A-G intron -    22484847
chr2:152805080(-) A-G intron -    22484847
chr2:152805099(-) A-G intron -    22484847
chr2:152806344(-) A-G intron -    22484847
chr2:152806396(-) A-G intron -    22484847
chr2:152807707(-) A-G intron -    22484847
chr2:152807712(-) A-G intron -    22484847
chr2:152819750(-) A-G intron -    22484847
chr2:152819779(-) A-G intron -    22484847
chr2:152823654(-) A-G intron -    22484847
chr2:152850261(-) A-G intron -    22484847
chr2:152850498(-) A-G intron -    22484847
chr2:152850531(-) A-G intron -    22484847
chr2:152850591(-) A-G intron -    22484847
chr2:152850680(-) A-G intron -    22484847
chr2:152850859(-) A-G intron -    22484847
chr2:152850860(-) A-G intron -    22484847
chr2:152851391(-) A-G intron -    22484847
chr2:152852080(-) A-G intron -    22484847
chr2:152852111(-) A-G intron -    22484847
chr2:152852201(-) A-G intron -    22484847
chr2:152859736(-) A-G intron -    22484847
chr2:152859740(-) A-G intron -    22484847
chr2:152860571(-) A-G intron -    22484847
chr2:152860629(-) A-G intron -    22484847
chr2:152864903(-) A-G intron -    22484847
chr2:152865610(-) A-G intron -    22484847
chr2:152865623(-) A-G intron -    22484847
chr2:152865658(-) A-G intron -    22484847
chr2:152870695(-) A-G intron -    22484847
chr2:152870739(-) A-G intron -    22484847
chr2:152870847(-) A-G intron -    22484847
chr2:152871105(-) A-G intron -    22484847
chr2:152871162(-) A-G intron -    22484847
chr2:152871243(-) A-T intron -    22484847
chr2:152874100(-) A-G intron -    22484847
chr2:152874139(-) A-G intron -    22484847
chr2:152874484(-) A-G intron -    22484847
chr2:152874619(-) A-G intron -    22484847
chr2:152874620(-) A-G intron -    22484847
chr2:152874626(-) A-G intron -    22484847
chr2:152875160(-) A-G intron -    22484847
chr2:152877596(-) A-G intron -    22484847
chr2:152880616(-) A-G intron -    22484847
chr2:152880649(-) A-G intron -    22484847
chr2:152880709(-) A-G intron -    22484847
chr2:152880715(-) A-G intron -    22484847
chr2:152880721(-) A-G intron -    22484847
chr2:152880780(-) A-G intron -    22484847
chr2:152881494(-) A-G intron -    22484847
chr2:152884283(-) A-G intron -    22484847
chr2:152889346(-) A-G intron -    22484847
chr2:152889352(-) A-G intron -    22484847
chr2:152889356(-) A-G intron -    22484847
chr2:152891882(-) A-G intron -    22484847
chr2:152895878(-) A-G intron -    22484847
chr2:152897058(-) A-G intron -    22484847
chr2:152897076(-) A-G intron -    22484847
chr2:152897080(-) A-G intron -    22484847
chr2:152897227(-) A-G intron -    22484847
chr2:152899952(-) A-G intron -    22484847
chr2:152900113(-) A-G intron -    22484847
chr2:152904265(-) A-G intron -    22484847
chr2:152904361(-) A-G intron -    22484847
chr2:152907135(-) A-G intron -    22484847
chr2:152908968(-) A-G intron -    22484847
chr2:152908972(-) A-G intron -    22484847
chr2:152909011(-) A-G intron -    22484847
chr2:152909075(-) A-G intron -    22484847
chr2:152909081(-) A-G intron -    22484847
chr2:152909259(-) A-G intron -    22484847
chr2:152909295(-) A-G intron -    22484847
chr2:152909312(-) A-G intron -    22484847
chr2:152909470(-) A-G intron -    22484847
chr2:152909479(-) A-G intron -    22484847
chr2:152909494(-) A-G intron -    22484847
chr2:152911604(-) A-G intron -    22484847
chr2:152911729(-) A-G intron -    22484847
chr2:152911805(-) A-G intron -    22484847
chr2:152911821(-) A-G intron -    22484847
chr2:152912687(-) A-G intron -    22484847
chr2:152921776(-) A-G intron -    22484847
chr2:152921786(-) A-G intron -    22484847
chr2:152921815(-) A-G intron -    22484847
chr2:152921816(-) A-G intron -    22484847
chr2:152921895(-) A-G intron -    22484847
chr2:152933884(-) A-G intron -    22484847
chr2:152935681(-) A-G intron -    22484847
chr2:152935714(-) A-G intron -    22484847
chr2:152935874(-) A-G intron -    22484847
chr2:152936055(-) A-G intron -    22484847
chr2:152936117(-) A-G intron -    22484847
chr2:152936747(-) A-G intron -    22484847
chr2:152936800(-) A-G intron -    22484847
chr2:152936814(-) A-G intron -    22484847
chr2:152936819(-) A-G intron -    22484847
chr2:152936836(-) A-G intron -    22484847
chr2:152936930(-) A-G intron -    22484847
chr2:152937994(-) A-G intron -    22484847
chr2:152952298(-) A-G intron -    22484847
chr2:152952303(-) A-G intron -    22484847
chr2:152952304(-) A-G intron -    22484847
chr2:152952325(-) A-G intron -    22484847
chr2:152952361(-) A-G intron -    22484847
chr2:152952362(-) A-G intron -    22484847
chr2:152952372(-) A-G intron -    22484847
chr2:152952423(-) A-G intron -    22484847
chr2:152952753(-) A-G intron -    22484847
chr2:152952754(-) A-G intron -    22484847
chr2:152952886(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase CACNB4
chr2:152695621-152695622(-) m6A 3'UTR       28052920//22608085
chr2:152695681-152695682(-) m6A 3'UTR//CDS       28052920//22608085
chr2:152695692-152695693(-) m6A 3'UTR//CDS       28052920//22608085
chr2:152695702-152695703(-) m6A 3'UTR//CDS       28052920//22608085
chr2:152695780-152695781(-) m6A 3'UTR//CDS       22608085
chr2:152955188-152955189(-) m6A 5'UTR//intron       27773536
chr2:152955194-152955195(-) m6A 5'UTR//intron       27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-190a-5p
Exosome Hepatocellular carcinoma cell line (HepG2)|Lung epithelial carcinoma cell line (A549)     20615901
Exosome Brain tissue     23382797
Exosome Plasma     23663360
Exosome Plasma     24683445
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Hepatocellular carcinoma cell line (HepG2)|Lung epithelial carcinoma cell line (A549)     20615901
Microvesicle Colon cancer cell line (LIM1863)|Mesenchymal stem cells|Urine     -
CACNB4
Chromatin K562 cells     -
Cytosol HCC cell line (HepG2)     -
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Membrane HCC cell line (HepG2)     -
Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-190a-5p
Interactor2: CACNB4

Evidence Support:


Weak-Evidence RNA-Seq
Prediction-Evidence Targetscan
Support Database ViRBase

References:


PMID 31570108 Target region None
Source ViRBase Interactor1 expression None
Tissue or cell line ARPE-19 human RPE cells Interactor2 expression None
Description Table 1 List of miRNAs that were differentially expressed between EBOV- and mock-infected human RPE cells at 24 h post-infection.Putative target genes in EBOV-infected human RPE cells were predicted from the 15 highly differentially expressed miRNAs using algorithms: 2629 targets by Diana microT; 1799 targets by miRDB; and 14315 targets by TargetScan (Additional file 5).

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