Basic Information:

  VIRBase ID:  

HHID00000278

  Virus:  

Porcine reproductive and respiratory syndrome virus (PRRSV)

  Host:  

Sus scrofa

  Confidence Score:  

0.6666

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      ssc-miR-21-3p:  MIMAT0037322          MAT2A:  NM_001167650     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ssc-miR-21-3p	MAT2A
miRBase Accession/Entrez ID	MIMAT0037322	100312974
Organism	Sus scrofa	Sus scrofa
Category	miRNA	mRNA
Alias	-	MATA2

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ssc-miR-21-3p	Exosome Porcine milk     24499489

Interaction Network (The top 100 interactions):

Interactor1: ssc-miR-21-3p
Interactor2: MAT2A

Evidence Support:

Weak-Evidence	RNA-Seq//Small RNA sequencing
Prediction-Evidence	miRanda//RNAHybrid
Support Database	ViRBase

References:

PMID	32785889	Target region	None
Source	ViRBase	Interactor1 expression	None
Tissue or cell line	MARC-145 cells	Interactor2 expression	None
Description	The target genes of DEmiRs were predicted using miRanda and RNAhybrid softwares. 390 potential target genes that were both differentially expressed in RNA-seq and predicted by softwares were identified (Supplementary Table 3).