Detail Information

Basic Information:


  VIRBase ID:  

HHID00000010

  Virus:  

Porcine reproductive and respiratory syndrome virus (PRRSV)

  Host:  

Sus scrofa

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol ALDBSSCG0000007263 IFIT3
miRBase
Accession/Entrez ID		 ALDBSSCG0000007263 100154248
Organism Sus scrofa Sus scrofa
Category lncRNA mRNA
Alias - -

Interaction Network (The top 100 interactions):


Interactor1: ALDBSSCG0000007263
Interactor2: IFIT3

Evidence Support:


Weak-Evidence Deep sequencing
Support Database ViRBase

References:


PMID 31682919 Target region None
Source ViRBase Interactor1 expression Upregulation
Tissue or cell line Porcine alveolar macrophages Interactor2 expression None
Description The expression of ALDBSSCG0000007263 was positively associated with ISG15, MX1, RSAD2, IFIT1, IFIT3 and ITIT5; while the expression of novel lncRNAs XLOC_008317 and XLOC_041472 were both negatively associated with ISG15, MX1, RSAD2, IFIT1, IFIT3, IFIT5 and GBP1.

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