ncRNADetailInformation

Detail Information
Functional analysis

miRNA name

pre-miRNA

family

pre-miRNA Sequence

mature-miRNA

mature sequence

pre-miRNA description

miR-29a

MI0000087	MIPF0000009	AUGACUGAUUUCUUUUGGUGUUCAGAGUCAAUAUAAUUUUCUAGCACCAUCUGAAAUCGGUUAU	MIMAT0000086 hsa-miR-29a-3p	UAGCACCAUCUGAAAUCGGUUA	miR-29a was previously know as miR-29 here and in . The maturesequence shown here represents the most commonly cloned form fromlarge-scale cloning studies .
MI0000087	MIPF0000009	AUGACUGAUUUCUUUUGGUGUUCAGAGUCAAUAUAAUUUUCUAGCACCAUCUGAAAUCGGUUAU	MIMAT0004503 hsa-miR-29a-5p	ACUGAUUUCUUUUGGUGUUCAG	miR-29a was previously know as miR-29 here and in . The maturesequence shown here represents the most commonly cloned form fromlarge-scale cloning studies .
MI0000087	MIPF0000009	AUGACUGAUUUCUUUUGGUGUUCAGAGUCAAUAUAAUUUUCUAGCACCAUCUGAAAUCGGUUAU	MIMAT0000086 hsa-miR-29a-3p	UAGCACCAUCUGAAAUCGGUUA	miR-29a was previously know as miR-29 here and in . The maturesequence shown here represents the most commonly cloned form fromlarge-scale cloning studies .
MI0000087	MIPF0000009	AUGACUGAUUUCUUUUGGUGUUCAGAGUCAAUAUAAUUUUCUAGCACCAUCUGAAAUCGGUUAU	MIMAT0004503 hsa-miR-29a-5p	ACUGAUUUCUUUUGGUGUUCAG	miR-29a was previously know as miR-29 here and in . The maturesequence shown here represents the most commonly cloned form fromlarge-scale cloning studies .
MI0000087	MIPF0000009	AUGACUGAUUUCUUUUGGUGUUCAGAGUCAAUAUAAUUUUCUAGCACCAUCUGAAAUCGGUUAU	MIMAT0000086 hsa-miR-29a-3p	UAGCACCAUCUGAAAUCGGUUA	miR-29a was previously know as miR-29 here and in . The maturesequence shown here represents the most commonly cloned form fromlarge-scale cloning studies .
MI0000087	MIPF0000009	AUGACUGAUUUCUUUUGGUGUUCAGAGUCAAUAUAAUUUUCUAGCACCAUCUGAAAUCGGUUAU	MIMAT0004503 hsa-miR-29a-5p	ACUGAUUUCUUUUGGUGUUCAG	miR-29a was previously know as miR-29 here and in . The maturesequence shown here represents the most commonly cloned form fromlarge-scale cloning studies .
MI0000087	MIPF0000009	AUGACUGAUUUCUUUUGGUGUUCAGAGUCAAUAUAAUUUUCUAGCACCAUCUGAAAUCGGUUAU	MIMAT0000086 hsa-miR-29a-3p	UAGCACCAUCUGAAAUCGGUUA	miR-29a was previously know as miR-29 here and in . The maturesequence shown here represents the most commonly cloned form fromlarge-scale cloning studies .
MI0000087	MIPF0000009	AUGACUGAUUUCUUUUGGUGUUCAGAGUCAAUAUAAUUUUCUAGCACCAUCUGAAAUCGGUUAU	MIMAT0004503 hsa-miR-29a-5p	ACUGAUUUCUUUUGGUGUUCAG	miR-29a was previously know as miR-29 here and in . The maturesequence shown here represents the most commonly cloned form fromlarge-scale cloning studies .
MI0000087	MIPF0000009	AUGACUGAUUUCUUUUGGUGUUCAGAGUCAAUAUAAUUUUCUAGCACCAUCUGAAAUCGGUUAU	MIMAT0000086 hsa-miR-29a-3p	UAGCACCAUCUGAAAUCGGUUA	miR-29a was previously know as miR-29 here and in . The maturesequence shown here represents the most commonly cloned form fromlarge-scale cloning studies .
MI0000087	MIPF0000009	AUGACUGAUUUCUUUUGGUGUUCAGAGUCAAUAUAAUUUUCUAGCACCAUCUGAAAUCGGUUAU	MIMAT0004503 hsa-miR-29a-5p	ACUGAUUUCUUUUGGUGUUCAG	miR-29a was previously know as miR-29 here and in . The maturesequence shown here represents the most commonly cloned form fromlarge-scale cloning studies .
MI0000087	MIPF0000009	AUGACUGAUUUCUUUUGGUGUUCAGAGUCAAUAUAAUUUUCUAGCACCAUCUGAAAUCGGUUAU	MIMAT0000086 hsa-miR-29a-3p	UAGCACCAUCUGAAAUCGGUUA	miR-29a was previously know as miR-29 here and in . The maturesequence shown here represents the most commonly cloned form fromlarge-scale cloning studies .
MI0000087	MIPF0000009	AUGACUGAUUUCUUUUGGUGUUCAGAGUCAAUAUAAUUUUCUAGCACCAUCUGAAAUCGGUUAU	MIMAT0004503 hsa-miR-29a-5p	ACUGAUUUCUUUUGGUGUUCAG	miR-29a was previously know as miR-29 here and in . The maturesequence shown here represents the most commonly cloned form fromlarge-scale cloning studies .
MI0000087	MIPF0000009	AUGACUGAUUUCUUUUGGUGUUCAGAGUCAAUAUAAUUUUCUAGCACCAUCUGAAAUCGGUUAU	MIMAT0000086 hsa-miR-29a-3p	UAGCACCAUCUGAAAUCGGUUA	miR-29a was previously know as miR-29 here and in . The maturesequence shown here represents the most commonly cloned form fromlarge-scale cloning studies .
MI0000087	MIPF0000009	AUGACUGAUUUCUUUUGGUGUUCAGAGUCAAUAUAAUUUUCUAGCACCAUCUGAAAUCGGUUAU	MIMAT0004503 hsa-miR-29a-5p	ACUGAUUUCUUUUGGUGUUCAG	miR-29a was previously know as miR-29 here and in . The maturesequence shown here represents the most commonly cloned form fromlarge-scale cloning studies .
MI0000087	MIPF0000009	AUGACUGAUUUCUUUUGGUGUUCAGAGUCAAUAUAAUUUUCUAGCACCAUCUGAAAUCGGUUAU	MIMAT0000086 hsa-miR-29a-3p	UAGCACCAUCUGAAAUCGGUUA	miR-29a was previously know as miR-29 here and in . The maturesequence shown here represents the most commonly cloned form fromlarge-scale cloning studies .
MI0000087	MIPF0000009	AUGACUGAUUUCUUUUGGUGUUCAGAGUCAAUAUAAUUUUCUAGCACCAUCUGAAAUCGGUUAU	MIMAT0004503 hsa-miR-29a-5p	ACUGAUUUCUUUUGGUGUUCAG	miR-29a was previously know as miR-29 here and in . The maturesequence shown here represents the most commonly cloned form fromlarge-scale cloning studies .
MI0000087	MIPF0000009	AUGACUGAUUUCUUUUGGUGUUCAGAGUCAAUAUAAUUUUCUAGCACCAUCUGAAAUCGGUUAU	MIMAT0000086 hsa-miR-29a-3p	UAGCACCAUCUGAAAUCGGUUA	miR-29a was previously know as miR-29 here and in . The maturesequence shown here represents the most commonly cloned form fromlarge-scale cloning studies .
MI0000087	MIPF0000009	AUGACUGAUUUCUUUUGGUGUUCAGAGUCAAUAUAAUUUUCUAGCACCAUCUGAAAUCGGUUAU	MIMAT0004503 hsa-miR-29a-5p	ACUGAUUUCUUUUGGUGUUCAG	miR-29a was previously know as miR-29 here and in . The maturesequence shown here represents the most commonly cloned form fromlarge-scale cloning studies .
MI0000087	MIPF0000009	AUGACUGAUUUCUUUUGGUGUUCAGAGUCAAUAUAAUUUUCUAGCACCAUCUGAAAUCGGUUAU	MIMAT0000086 hsa-miR-29a-3p	UAGCACCAUCUGAAAUCGGUUA	miR-29a was previously know as miR-29 here and in . The maturesequence shown here represents the most commonly cloned form fromlarge-scale cloning studies .
MI0000087	MIPF0000009	AUGACUGAUUUCUUUUGGUGUUCAGAGUCAAUAUAAUUUUCUAGCACCAUCUGAAAUCGGUUAU	MIMAT0004503 hsa-miR-29a-5p	ACUGAUUUCUUUUGGUGUUCAG	miR-29a was previously know as miR-29 here and in . The maturesequence shown here represents the most commonly cloned form fromlarge-scale cloning studies .
MI0000087	MIPF0000009	AUGACUGAUUUCUUUUGGUGUUCAGAGUCAAUAUAAUUUUCUAGCACCAUCUGAAAUCGGUUAU	MIMAT0000086 hsa-miR-29a-3p	UAGCACCAUCUGAAAUCGGUUA	miR-29a was previously know as miR-29 here and in . The maturesequence shown here represents the most commonly cloned form fromlarge-scale cloning studies .
MI0000087	MIPF0000009	AUGACUGAUUUCUUUUGGUGUUCAGAGUCAAUAUAAUUUUCUAGCACCAUCUGAAAUCGGUUAU	MIMAT0000086 hsa-miR-29a-3p	UAGCACCAUCUGAAAUCGGUUA	miR-29a was previously know as miR-29 here and in . The maturesequence shown here represents the most commonly cloned form fromlarge-scale cloning studies .
MI0000087	MIPF0000009	AUGACUGAUUUCUUUUGGUGUUCAGAGUCAAUAUAAUUUUCUAGCACCAUCUGAAAUCGGUUAU	MIMAT0000086 hsa-miR-29a-3p	UAGCACCAUCUGAAAUCGGUUA	miR-29a was previously know as miR-29 here and in . The maturesequence shown here represents the most commonly cloned form fromlarge-scale cloning studies .

link to database

TargetScanS 6.2 | MicroCosm | microRNA.org | miRNAMap 2.0

Interacted genes from RAID,miRTarBase

FGG,SKI,CYTB,PPM1D,FAM133A,CD276,BACE1,EZH2,HUWE1,PIK3R1,ITIH5,MYCN,BCAP31,SUV420H2,VDAC1
more » FGG,SKI,CYTB,PPM1D,FAM133A,CD276,BACE1,EZH2,HUWE1,PIK3R1,ITIH5,MYCN,BCAP31,SUV420H2,VDAC1,DKK1,IMPDH1,IGF1,ELN,MMP2,ADAMTS7,COL4A1,HDAC4,ABL1,NAV3,PDGFC,TRIM68,PAN2,CCT4,CDC42,DNMT3B,C1QTNF6,SP1,HNRNPM,PXDN,EIF3E,RAN,COL4A3BP,TET1,SARS,S100B,COL4A2,COL4A4,DNMT3A,PPP1R13B,DICER1,BCL2,EIF2C1,FAM59B,RET,OAZ1,COL1A2,ITGA11,RPS4X,CCDC14,ZFP91,C9orf140,GLUL,COL4A3,FGA,RRAGC,PPT1,DAG1,LPL,CPEB4,SPARC,CCND2,COL1A1,VDAC2,FAM109B,HBP1,HHAT,SLC16A1,SFRP2,SERPINB9,COL4A5,CDK6,MCL1,TRIM63,RPS6KA3,ADAMTS9,BCL7A,TNFAIP3,FGB,SYNCRIP,CPEB3,DNMT1,WBSCR16,YY1,CRKL,SERPINH1,PTEN,TGFB3,DIABLO,SP2,KREMEN2,NASP

KEGG pathways enriched for interacted genes

pathway name

pathway description

target genes enrich in pathway

p-value

hsa04510	Focal adhesion	PTEN,BCL2,COL4A1,COL4A2,COL4A4,PDGFC,IGF1,CRKL,COL1A1,CCND2,ITGA11,COL1A2,PIK3R1,CDC42,	1.68E-8
hsa05200	Pathways in cancer	PTEN,MMP2,BCL2,COL4A1,COL4A2,COL4A4,IGF1,ABL1,RET,CDK6,CRKL,PIK3R1,CDC42,TGFB3,	5.01E-6
hsa04512	ECM-receptor interaction	COL4A1,COL4A2,COL4A4,COL1A1,COL1A2,ITGA11,DAG1,	1.06E-4
hsa05222	Small cell lung cancer	CDK6,PTEN,BCL2,COL4A1,COL4A2,COL4A4,PIK3R1,	1.06E-4
hsa04115	p53 signaling pathway	CDK6,PPM1D,PTEN,CCND2,IGF1,	3.38E-2

Gene ontology terms enriched for interacted genes

GO terms

GO terms description

target genes enrich in GO term

p-value

GO:0001503	ossification	MMP2,BCL2,COL1A1,IGF1,SP1,SPARC,TGFB3,	7.33E-5
GO:0042127	regulation of cell proliferation	PTEN,PPM1D,BCL2,COL4A3,PDGFC,HDAC4,IGF1,SPARC,CD276,ZFP91,CDK6,MYCN,CCND2,RPS4X,SKI,TGFB3,	7.69E-5
GO:0032270	positive regulation of cellular protein metabolic process	ZFP91,BCL2,HDAC4,CCND2,IGF1,RPS4X,DNMT1,TGFB3,DNMT3B,	8.91E-5
GO:0060348	bone development	MMP2,BCL2,COL1A1,IGF1,SP1,SPARC,TGFB3,	1.06E-4
GO:0051247	positive regulation of protein metabolic process	ZFP91,BCL2,HDAC4,CCND2,IGF1,RPS4X,DNMT1,TGFB3,DNMT3B,	1.19E-4

GO:0051130	positive regulation of cellular component organization	ZFP91,IGF1,PPT1,DNMT1,PIK3R1,CDC42,TGFB3,DNMT3B,	1.20E-4
GO:0001501	skeletal system development	RPS6KA3,MMP2,BCL2,COL1A1,HDAC4,IGF1,COL1A2,SP1,SPARC,TGFB3,	1.43E-4
GO:0032268	regulation of cellular protein metabolic process	ZFP91,BCL2,EIF2C1,PDGFC,HDAC4,CCND2,IGF1,RPS4X,DNMT1,EIF3E,TGFB3,DNMT3B,	1.43E-4
GO:0031401	positive regulation of protein modification process	ZFP91,BCL2,HDAC4,CCND2,IGF1,DNMT1,TGFB3,DNMT3B,	1.47E-4
GO:0010810	regulation of cell-substrate adhesion	CDK6,PTEN,BCL2,COL1A1,PIK3R1,	1.76E-4
GO:0008283	cell proliferation	S100B,ELN,PTEN,BCL2,COL4A3,NASP,IGF1,GLUL,COL4A3BP,IMPDH1,CD276,	3.23E-4
GO:0001775	cell activation	ZFP91,BCL2,FGB,FGG,HDAC4,PIK3R1,FGA,IMPDH1,CD276,	3.70E-4
GO:0031399	regulation of protein modification process	ZFP91,BCL2,PDGFC,HDAC4,CCND2,IGF1,DNMT1,TGFB3,DNMT3B,	4.44E-4
GO:0001952	regulation of cell-matrix adhesion	CDK6,PTEN,BCL2,PIK3R1,	5.85E-4
GO:0043414	biopolymer methylation	EZH2,SUV420H2,DNMT1,DNMT3A,DNMT3B,	8.41E-4
GO:0008284	positive regulation of cell proliferation	ZFP91,CDK6,BCL2,MYCN,PDGFC,HDAC4,CCND2,IGF1,RPS4X,CD276,	9.58E-4
GO:0051153	regulation of striated muscle cell differentiation	EZH2,BCL2,COL4A4,HDAC4,	9.71E-4
GO:0016569	covalent chromatin modification	HUWE1,EZH2,HDAC4,SUV420H2,DNMT3A,DNMT3B,	1.05E-2
GO:0032259	methylation	EZH2,SUV420H2,DNMT1,DNMT3A,DNMT3B,	1.20E-2
GO:0040029	regulation of gene expression, epigenetic	DICER1,EIF2C1,DNMT1,DNMT3A,DNMT3B,	1.26E-2
GO:0030278	regulation of ossification	CDK6,BCL2,SKI,CD276,TGFB3,	1.33E-2
GO:0016568	chromatin modification	HUWE1,EZH2,HDAC4,NASP,SUV420H2,DNMT1,DNMT3A,DNMT3B,	1.44E-2
GO:0043066	negative regulation of apoptosis	ZFP91,PTEN,BCL2,TNFAIP3,SERPINB9,IGF1,PPT1,TGFB3,MCL1,	1.45E-2
GO:0043069	negative regulation of programmed cell death	ZFP91,PTEN,BCL2,TNFAIP3,SERPINB9,IGF1,PPT1,TGFB3,MCL1,	1.58E-2
GO:0010035	response to inorganic substance	PXDN,PTEN,BCL2,FGB,COL1A1,FGG,FGA,	1.61E-2
GO:0060284	regulation of cell development	ZFP91,BCL2,COL4A4,HDAC4,CCND2,TGFB3,DNMT3B,	1.61E-2
GO:0060548	negative regulation of cell death	ZFP91,PTEN,BCL2,TNFAIP3,SERPINB9,IGF1,PPT1,TGFB3,MCL1,	1.61E-2
GO:0008285	negative regulation of cell proliferation	CDK6,PPM1D,PTEN,BCL2,COL4A3,HDAC4,SKI,CD276,TGFB3,	1.64E-2
GO:0051147	regulation of muscle cell differentiation	EZH2,BCL2,COL4A4,HDAC4,	1.73E-2
GO:0010608	posttranscriptional regulation of gene expression	PTEN,BCL2,DICER1,EIF2C1,SYNCRIP,RPS4X,EIF3E,	1.86E-2
GO:0010812	negative regulation of cell-substrate adhesion	PTEN,COL1A1,PIK3R1,	1.97E-2
GO:0045596	negative regulation of cell differentiation	EZH2,ZFP91,CDK6,DICER1,HDAC4,IGF1,SKI,	2.09E-2
GO:0001934	positive regulation of protein amino acid phosphorylation	ZFP91,BCL2,CCND2,IGF1,TGFB3,	2.16E-2
GO:0035295	tube development	RET,BCL2,MYCN,DICER1,IGF1,SP1,TGFB3,	2.30E-2
GO:0042327	positive regulation of phosphorylation	ZFP91,BCL2,CCND2,IGF1,TGFB3,	2.96E-2
GO:0045937	positive regulation of phosphate metabolic process	ZFP91,BCL2,CCND2,IGF1,TGFB3,	3.30E-2
GO:0010562	positive regulation of phosphorus metabolic process	ZFP91,BCL2,CCND2,IGF1,TGFB3,	3.30E-2
GO:0042981	regulation of apoptosis	PTEN,BCL2,COL4A3,IGF1,PPT1,ABL1,PPP1R13B,MCL1,ZFP91,DIABLO,TNFAIP3,SERPINB9,TGFB3,	3.52E-2
GO:0051329	interphase of mitotic cell cycle	CDK6,PPM1D,BCL2,CCND2,ABL1,	3.67E-2
GO:0006915	apoptosis	RRAGC,DIABLO,PTEN,BCL2,COL4A3,TNFAIP3,VDAC1,PPT1,PPP1R13B,BCAP31,MCL1,	3.68E-2
GO:0043524	negative regulation of neuron apoptosis	ZFP91,BCL2,PPT1,TGFB3,	3.75E-2
GO:0030198	extracellular matrix organization	ELN,COL4A2,COL1A1,COL1A2,SERPINH1,	3.80E-2
GO:0043067	regulation of programmed cell death	PTEN,BCL2,COL4A3,IGF1,PPT1,ABL1,PPP1R13B,MCL1,ZFP91,DIABLO,TNFAIP3,SERPINB9,TGFB3,	3.81E-2
GO:0010941	regulation of cell death	PTEN,BCL2,COL4A3,IGF1,PPT1,ABL1,PPP1R13B,MCL1,ZFP91,DIABLO,TNFAIP3,SERPINB9,TGFB3,	3.93E-2
GO:0051325	interphase	CDK6,PPM1D,BCL2,CCND2,ABL1,	4.07E-2
GO:0012501	programmed cell death	RRAGC,DIABLO,PTEN,BCL2,COL4A3,TNFAIP3,VDAC1,PPT1,PPP1R13B,BCAP31,MCL1,	4.09E-2
GO:0001932	regulation of protein amino acid phosphorylation	ZFP91,BCL2,PDGFC,CCND2,IGF1,TGFB3,	4.19E-2
GO:0010033	response to organic substance	PTEN,BCL2,COL4A3,DICER1,COL1A1,HDAC4,CCND2,GLUL,SERPINH1,PIK3R1,TGFB3,MCL1,	4.43E-2
GO:0016458	gene silencing	DICER1,EIF2C1,DNMT3A,DNMT3B,	4.88E-2
GO:0006730	one-carbon metabolic process	EZH2,SUV420H2,DNMT1,DNMT3A,DNMT3B,	4.95E-2
GO:0048534	hemopoietic or lymphoid organ development	CDK6,CRKL,BCL2,HDAC4,SP1,PIK3R1,CDC42,	5.22E-2
GO:0040007	growth	RRAGC,ZFP91,BCL2,IGF1,FGA,TGFB3,	5.31E-2
GO:0010604	positive regulation of macromolecule metabolic process	BCL2,PDGFC,HDAC4,IGF1,SP1,DNMT1,RAN,DNMT3B,CD276,ZFP91,CCND2,RPS4X,TGFB3,	5.85E-2
GO:0010558	negative regulation of macromolecule biosynthetic process	EIF2C1,HDAC4,SKI,DNMT1,BCL7A,EIF3E,DNMT3A,CD276,TGFB3,DNMT3B,	6.22E-2
GO:0051960	regulation of nervous system development	ZFP91,BCL2,COL4A4,CCND2,IGF1,DNMT3B,	6.49E-2
GO:0002520	immune system development	CDK6,CRKL,BCL2,HDAC4,SP1,PIK3R1,CDC42,	6.94E-2
GO:0031327	negative regulation of cellular biosynthetic process	EIF2C1,HDAC4,SKI,DNMT1,BCL7A,EIF3E,DNMT3A,CD276,TGFB3,DNMT3B,	7.29E-2
GO:0048754	branching morphogenesis of a tube	BCL2,MYCN,DICER1,IGF1,	7.40E-2
GO:0035239	tube morphogenesis	RET,BCL2,MYCN,DICER1,IGF1,	7.69E-2
GO:0010038	response to metal ion	PTEN,BCL2,FGB,FGG,FGA,	8.11E-2
GO:0009890	negative regulation of biosynthetic process	EIF2C1,HDAC4,SKI,DNMT1,BCL7A,EIF3E,DNMT3A,CD276,TGFB3,DNMT3B,	8.33E-2
GO:0006325	chromatin organization	HUWE1,EZH2,HDAC4,NASP,SUV420H2,DNMT1,DNMT3A,DNMT3B,	8.46E-2
GO:0006305	DNA alkylation	DNMT1,DNMT3A,DNMT3B,	9.40E-2
GO:0006306	DNA methylation	DNMT1,DNMT3A,DNMT3B,	9.40E-2
GO:0044093	positive regulation of molecular function	DIABLO,BCL2,COL4A3,PDGFC,HDAC4,CCND2,SKI,ABL1,CDC42,TGFB3,	9.57E-2
GO:0030155	regulation of cell adhesion	CDK6,PTEN,BCL2,COL1A1,PIK3R1,	9.98E-2

KEGG pathways and Gene Ontology terms enriched for the interacted genes of ncRNA from RAID and miRTarBase.

disease name	related genes	p-value