ncRNADetailInformation

Detail Information
Functional analysis

miRNA name

pre-miRNA

family

pre-miRNA Sequence

mature-miRNA

mature sequence

pre-miRNA description

miR-182

MI0000272	MIPF0000116	GAGCUGCUUGCCUCCCCCCGUUUUUGGCAAUGGUAGAACUCACACUGGUGAGGUAACAGGAUCCGGUGGUUCUAGACUUGCCAACUAUGGGGCGAGGACUCAGCCGGCAC	MIMAT0000259 hsa-miR-182-5p	UUUGGCAAUGGUAGAACUCACACU
MI0000272	MIPF0000116	GAGCUGCUUGCCUCCCCCCGUUUUUGGCAAUGGUAGAACUCACACUGGUGAGGUAACAGGAUCCGGUGGUUCUAGACUUGCCAACUAUGGGGCGAGGACUCAGCCGGCAC	MIMAT0000260 hsa-miR-182-3p	UGGUUCUAGACUUGCCAACUA
MI0000272	MIPF0000116	GAGCUGCUUGCCUCCCCCCGUUUUUGGCAAUGGUAGAACUCACACUGGUGAGGUAACAGGAUCCGGUGGUUCUAGACUUGCCAACUAUGGGGCGAGGACUCAGCCGGCAC	MIMAT0000259 hsa-miR-182-5p	UUUGGCAAUGGUAGAACUCACACU
MI0000272	MIPF0000116	GAGCUGCUUGCCUCCCCCCGUUUUUGGCAAUGGUAGAACUCACACUGGUGAGGUAACAGGAUCCGGUGGUUCUAGACUUGCCAACUAUGGGGCGAGGACUCAGCCGGCAC	MIMAT0000260 hsa-miR-182-3p	UGGUUCUAGACUUGCCAACUA
MI0000272	MIPF0000116	GAGCUGCUUGCCUCCCCCCGUUUUUGGCAAUGGUAGAACUCACACUGGUGAGGUAACAGGAUCCGGUGGUUCUAGACUUGCCAACUAUGGGGCGAGGACUCAGCCGGCAC	MIMAT0000259 hsa-miR-182-5p	UUUGGCAAUGGUAGAACUCACACU
MI0000272	MIPF0000116	GAGCUGCUUGCCUCCCCCCGUUUUUGGCAAUGGUAGAACUCACACUGGUGAGGUAACAGGAUCCGGUGGUUCUAGACUUGCCAACUAUGGGGCGAGGACUCAGCCGGCAC	MIMAT0000260 hsa-miR-182-3p	UGGUUCUAGACUUGCCAACUA
MI0000272	MIPF0000116	GAGCUGCUUGCCUCCCCCCGUUUUUGGCAAUGGUAGAACUCACACUGGUGAGGUAACAGGAUCCGGUGGUUCUAGACUUGCCAACUAUGGGGCGAGGACUCAGCCGGCAC	MIMAT0000259 hsa-miR-182-5p	UUUGGCAAUGGUAGAACUCACACU
MI0000272	MIPF0000116	GAGCUGCUUGCCUCCCCCCGUUUUUGGCAAUGGUAGAACUCACACUGGUGAGGUAACAGGAUCCGGUGGUUCUAGACUUGCCAACUAUGGGGCGAGGACUCAGCCGGCAC	MIMAT0000260 hsa-miR-182-3p	UGGUUCUAGACUUGCCAACUA
MI0000272	MIPF0000116	GAGCUGCUUGCCUCCCCCCGUUUUUGGCAAUGGUAGAACUCACACUGGUGAGGUAACAGGAUCCGGUGGUUCUAGACUUGCCAACUAUGGGGCGAGGACUCAGCCGGCAC	MIMAT0000259 hsa-miR-182-5p	UUUGGCAAUGGUAGAACUCACACU
MI0000272	MIPF0000116	GAGCUGCUUGCCUCCCCCCGUUUUUGGCAAUGGUAGAACUCACACUGGUGAGGUAACAGGAUCCGGUGGUUCUAGACUUGCCAACUAUGGGGCGAGGACUCAGCCGGCAC	MIMAT0000260 hsa-miR-182-3p	UGGUUCUAGACUUGCCAACUA
MI0000272	MIPF0000116	GAGCUGCUUGCCUCCCCCCGUUUUUGGCAAUGGUAGAACUCACACUGGUGAGGUAACAGGAUCCGGUGGUUCUAGACUUGCCAACUAUGGGGCGAGGACUCAGCCGGCAC	MIMAT0000259 hsa-miR-182-5p	UUUGGCAAUGGUAGAACUCACACU
MI0000272	MIPF0000116	GAGCUGCUUGCCUCCCCCCGUUUUUGGCAAUGGUAGAACUCACACUGGUGAGGUAACAGGAUCCGGUGGUUCUAGACUUGCCAACUAUGGGGCGAGGACUCAGCCGGCAC	MIMAT0000260 hsa-miR-182-3p	UGGUUCUAGACUUGCCAACUA
MI0000098	MIPF0000072	UGGCCGAUUUUGGCACUAGCACAUUUUUGCUUGUGUCUCUCCGCUCUGAGCAAUCAUGUGCAGUGCCAAUAUGGGAAA	MIMAT0000095 hsa-miR-96-5p	UUUGGCACUAGCACAUUUUUGCU	This sequence is localised to chromosome 7 and was named mir-96-7 inreference . The mature sequence shown here represents the mostcommonly cloned form from large-scale cloning studies .
MI0000098	MIPF0000072	UGGCCGAUUUUGGCACUAGCACAUUUUUGCUUGUGUCUCUCCGCUCUGAGCAAUCAUGUGCAGUGCCAAUAUGGGAAA	MIMAT0004510 hsa-miR-96-3p	AAUCAUGUGCAGUGCCAAUAUG	This sequence is localised to chromosome 7 and was named mir-96-7 inreference . The mature sequence shown here represents the mostcommonly cloned form from large-scale cloning studies .
MI0000098	MIPF0000072	UGGCCGAUUUUGGCACUAGCACAUUUUUGCUUGUGUCUCUCCGCUCUGAGCAAUCAUGUGCAGUGCCAAUAUGGGAAA	MIMAT0000095 hsa-miR-96-5p	UUUGGCACUAGCACAUUUUUGCU	This sequence is localised to chromosome 7 and was named mir-96-7 inreference . The mature sequence shown here represents the mostcommonly cloned form from large-scale cloning studies .
MI0000098	MIPF0000072	UGGCCGAUUUUGGCACUAGCACAUUUUUGCUUGUGUCUCUCCGCUCUGAGCAAUCAUGUGCAGUGCCAAUAUGGGAAA	MIMAT0004510 hsa-miR-96-3p	AAUCAUGUGCAGUGCCAAUAUG	This sequence is localised to chromosome 7 and was named mir-96-7 inreference . The mature sequence shown here represents the mostcommonly cloned form from large-scale cloning studies .
MI0000098	MIPF0000072	UGGCCGAUUUUGGCACUAGCACAUUUUUGCUUGUGUCUCUCCGCUCUGAGCAAUCAUGUGCAGUGCCAAUAUGGGAAA	MIMAT0000095 hsa-miR-96-5p	UUUGGCACUAGCACAUUUUUGCU	This sequence is localised to chromosome 7 and was named mir-96-7 inreference . The mature sequence shown here represents the mostcommonly cloned form from large-scale cloning studies .
MI0000098	MIPF0000072	UGGCCGAUUUUGGCACUAGCACAUUUUUGCUUGUGUCUCUCCGCUCUGAGCAAUCAUGUGCAGUGCCAAUAUGGGAAA	MIMAT0004510 hsa-miR-96-3p	AAUCAUGUGCAGUGCCAAUAUG	This sequence is localised to chromosome 7 and was named mir-96-7 inreference . The mature sequence shown here represents the mostcommonly cloned form from large-scale cloning studies .
MI0000272	MIPF0000116	GAGCUGCUUGCCUCCCCCCGUUUUUGGCAAUGGUAGAACUCACACUGGUGAGGUAACAGGAUCCGGUGGUUCUAGACUUGCCAACUAUGGGGCGAGGACUCAGCCGGCAC	MIMAT0000259 hsa-miR-182-5p	UUUGGCAAUGGUAGAACUCACACU
MI0000272	MIPF0000116	GAGCUGCUUGCCUCCCCCCGUUUUUGGCAAUGGUAGAACUCACACUGGUGAGGUAACAGGAUCCGGUGGUUCUAGACUUGCCAACUAUGGGGCGAGGACUCAGCCGGCAC	MIMAT0000260 hsa-miR-182-3p	UGGUUCUAGACUUGCCAACUA
MI0000272	MIPF0000116	GAGCUGCUUGCCUCCCCCCGUUUUUGGCAAUGGUAGAACUCACACUGGUGAGGUAACAGGAUCCGGUGGUUCUAGACUUGCCAACUAUGGGGCGAGGACUCAGCCGGCAC	MIMAT0000259 hsa-miR-182-5p	UUUGGCAAUGGUAGAACUCACACU
MI0000272	MIPF0000116	GAGCUGCUUGCCUCCCCCCGUUUUUGGCAAUGGUAGAACUCACACUGGUGAGGUAACAGGAUCCGGUGGUUCUAGACUUGCCAACUAUGGGGCGAGGACUCAGCCGGCAC	MIMAT0000260 hsa-miR-182-3p	UGGUUCUAGACUUGCCAACUA
MI0000272	MIPF0000116	GAGCUGCUUGCCUCCCCCCGUUUUUGGCAAUGGUAGAACUCACACUGGUGAGGUAACAGGAUCCGGUGGUUCUAGACUUGCCAACUAUGGGGCGAGGACUCAGCCGGCAC	MIMAT0000259 hsa-miR-182-5p	UUUGGCAAUGGUAGAACUCACACU
MI0000272	MIPF0000116	GAGCUGCUUGCCUCCCCCCGUUUUUGGCAAUGGUAGAACUCACACUGGUGAGGUAACAGGAUCCGGUGGUUCUAGACUUGCCAACUAUGGGGCGAGGACUCAGCCGGCAC	MIMAT0000260 hsa-miR-182-3p	UGGUUCUAGACUUGCCAACUA
MI0000272	MIPF0000116	GAGCUGCUUGCCUCCCCCCGUUUUUGGCAAUGGUAGAACUCACACUGGUGAGGUAACAGGAUCCGGUGGUUCUAGACUUGCCAACUAUGGGGCGAGGACUCAGCCGGCAC	MIMAT0000259 hsa-miR-182-5p	UUUGGCAAUGGUAGAACUCACACU
MI0000272	MIPF0000116	GAGCUGCUUGCCUCCCCCCGUUUUUGGCAAUGGUAGAACUCACACUGGUGAGGUAACAGGAUCCGGUGGUUCUAGACUUGCCAACUAUGGGGCGAGGACUCAGCCGGCAC	MIMAT0000260 hsa-miR-182-3p	UGGUUCUAGACUUGCCAACUA
MI0000272	MIPF0000116	GAGCUGCUUGCCUCCCCCCGUUUUUGGCAAUGGUAGAACUCACACUGGUGAGGUAACAGGAUCCGGUGGUUCUAGACUUGCCAACUAUGGGGCGAGGACUCAGCCGGCAC	MIMAT0000260 hsa-miR-182-3p	UGGUUCUAGACUUGCCAACUA
MI0000272	MIPF0000116	GAGCUGCUUGCCUCCCCCCGUUUUUGGCAAUGGUAGAACUCACACUGGUGAGGUAACAGGAUCCGGUGGUUCUAGACUUGCCAACUAUGGGGCGAGGACUCAGCCGGCAC	MIMAT0000259 hsa-miR-182-5p	UUUGGCAAUGGUAGAACUCACACU
MI0000272	MIPF0000116	GAGCUGCUUGCCUCCCCCCGUUUUUGGCAAUGGUAGAACUCACACUGGUGAGGUAACAGGAUCCGGUGGUUCUAGACUUGCCAACUAUGGGGCGAGGACUCAGCCGGCAC	MIMAT0000260 hsa-miR-182-3p	UGGUUCUAGACUUGCCAACUA
MI0000272	MIPF0000116	GAGCUGCUUGCCUCCCCCCGUUUUUGGCAAUGGUAGAACUCACACUGGUGAGGUAACAGGAUCCGGUGGUUCUAGACUUGCCAACUAUGGGGCGAGGACUCAGCCGGCAC	MIMAT0000259 hsa-miR-182-5p	UUUGGCAAUGGUAGAACUCACACU
MI0000272	MIPF0000116	GAGCUGCUUGCCUCCCCCCGUUUUUGGCAAUGGUAGAACUCACACUGGUGAGGUAACAGGAUCCGGUGGUUCUAGACUUGCCAACUAUGGGGCGAGGACUCAGCCGGCAC	MIMAT0000260 hsa-miR-182-3p	UGGUUCUAGACUUGCCAACUA
MI0000272	MIPF0000116	GAGCUGCUUGCCUCCCCCCGUUUUUGGCAAUGGUAGAACUCACACUGGUGAGGUAACAGGAUCCGGUGGUUCUAGACUUGCCAACUAUGGGGCGAGGACUCAGCCGGCAC	MIMAT0000259 hsa-miR-182-5p	UUUGGCAAUGGUAGAACUCACACU
MI0000272	MIPF0000116	GAGCUGCUUGCCUCCCCCCGUUUUUGGCAAUGGUAGAACUCACACUGGUGAGGUAACAGGAUCCGGUGGUUCUAGACUUGCCAACUAUGGGGCGAGGACUCAGCCGGCAC	MIMAT0000259 hsa-miR-182-5p	UUUGGCAAUGGUAGAACUCACACU

link to database

TargetScanS 6.2 | MicroCosm | microRNA.org | miRNAMap 2.0

Interacted genes from RAID,miRTarBase

RECK,ATP13A3,TUBA1B,EP300,BAG1,FLOT1,RAB3IP,CBX6,FOXO1,RPL5,ADCY6,SNAI2,RBM15B,ATP5O,CISD2
more » RECK,ATP13A3,TUBA1B,EP300,BAG1,FLOT1,RAB3IP,CBX6,FOXO1,RPL5,ADCY6,SNAI2,RBM15B,ATP5O,CISD2,FOXF2,SLC25A14,LSM14A,SNRPA1,ACVR1B,CBWD1,RARG,STAG2,EVI5,UBP1,TTC28,FGF9,PFN1,PRKAA2,CYLD,RBM12,BRIP1,PCOLCE2,ACTN4,BCL2,PIK3C2A,RPS3,PDCD4,APITD1,ERO1L,TMEM184C,RPS4X,CDKN1A,MITF,MTSS1,FMNL3,TNKS1BP1,SMAD4,LBR,CASC3,TSC22D3,RPS6,CCND2,GNL1,C11orf2,ETV3,CPEB1,CLOCK,RCC2,NUFIP2,SEC61A2,RLF,SLC35B4,ANO6,FOXO3,CREB1,USP16,UBA1

KEGG pathways enriched for interacted genes

pathway name

pathway description

target genes enrich in pathway

p-value

hsa04520	Adherens junction	EP300,ACVR1B,SMAD4,ACTN4,SNAI2,	1.12E-2
hsa05215	Prostate cancer	BCL2,FOXO1,EP300,CREB1,CDKN1A,	1.92E-2
hsa05200	Pathways in cancer	BCL2,MITF,FOXO1,EP300,ACVR1B,FGF9,SMAD4,CDKN1A,	2.97E-2
hsa04110	Cell cycle	EP300,CCND2,SMAD4,CDKN1A,STAG2,	6.54E-2
hsa03010	Ribosome	RPL5,RPS4X,RPS3,RPS6,	1.53E-1

Gene ontology terms enriched for interacted genes

GO terms

GO terms description

target genes enrich in GO term

p-value

GO:0006357	regulation of transcription from RNA polymerase II promoter	FOXO1,FOXO3,EP300,RARG,CLOCK,CREB1,SNAI2,UBP1,MITF,SMAD4,BRIP1,ETV3,PFN1,	4.81E-5
GO:0045893	positive regulation of transcription, DNA-dependent	FOXF2,MITF,FOXO1,EP300,FOXO3,RARG,SMAD4,CREB1,CLOCK,USP16,	1.78E-4
GO:0051254	positive regulation of RNA metabolic process	FOXF2,MITF,FOXO1,EP300,FOXO3,RARG,SMAD4,CREB1,CLOCK,USP16,	1.90E-4
GO:0010604	positive regulation of macromolecule metabolic process	BCL2,FOXO1,FOXO3,EP300,RARG,CLOCK,CREB1,FOXF2,MITF,SMAD4,CCND2,RPS4X,USP16,	2.29E-4
GO:0008361	regulation of cell size	BCL2,EP300,RARG,ACVR1B,SMAD4,CREB1,CDKN1A,	2.42E-4

GO:0010557	positive regulation of macromolecule biosynthetic process	FOXF2,MITF,FOXO1,EP300,FOXO3,RARG,SMAD4,RPS4X,CREB1,CLOCK,USP16,	4.14E-4
GO:0042981	regulation of apoptosis	BCL2,MITF,FOXO1,FOXO3,RARG,ACVR1B,CREB1,BAG1,ACTN4,CDKN1A,RPS3,RPS6,	5.31E-4
GO:0043067	regulation of programmed cell death	BCL2,MITF,FOXO1,FOXO3,RARG,ACVR1B,CREB1,BAG1,ACTN4,CDKN1A,RPS3,RPS6,	5.77E-4
GO:0010941	regulation of cell death	BCL2,MITF,FOXO1,FOXO3,RARG,ACVR1B,CREB1,BAG1,ACTN4,CDKN1A,RPS3,RPS6,	5.95E-4
GO:0031328	positive regulation of cellular biosynthetic process	FOXF2,MITF,FOXO1,EP300,FOXO3,RARG,SMAD4,RPS4X,CREB1,CLOCK,USP16,	5.95E-4
GO:0045941	positive regulation of transcription	FOXF2,MITF,FOXO1,EP300,FOXO3,RARG,SMAD4,CREB1,CLOCK,USP16,	6.12E-4
GO:0009891	positive regulation of biosynthetic process	FOXF2,MITF,FOXO1,EP300,FOXO3,RARG,SMAD4,RPS4X,CREB1,CLOCK,USP16,	6.66E-4
GO:0010628	positive regulation of gene expression	FOXF2,MITF,FOXO1,EP300,FOXO3,RARG,SMAD4,CREB1,CLOCK,USP16,	7.57E-4
GO:0045944	positive regulation of transcription from RNA polymerase II promoter	MITF,FOXO1,EP300,FOXO3,RARG,SMAD4,CREB1,CLOCK,	9.94E-4
GO:0032535	regulation of cellular component size	BCL2,EP300,RARG,ACVR1B,SMAD4,CREB1,CDKN1A,	1.03E-2
GO:0045935	positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	FOXF2,MITF,FOXO1,EP300,FOXO3,RARG,SMAD4,CREB1,CLOCK,USP16,	1.25E-2
GO:0045934	negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	FOXF2,UBP1,RARG,SMAD4,RBM15B,SNAI2,ETV3,RPS3,PDCD4,	1.44E-2
GO:0051173	positive regulation of nitrogen compound metabolic process	FOXF2,MITF,FOXO1,EP300,FOXO3,RARG,SMAD4,CREB1,CLOCK,USP16,	1.56E-2
GO:0051172	negative regulation of nitrogen compound metabolic process	FOXF2,UBP1,RARG,SMAD4,RBM15B,SNAI2,ETV3,RPS3,PDCD4,	1.57E-2
GO:0000082	G1/S transition of mitotic cell cycle	BCL2,ACVR1B,CCND2,CDKN1A,	1.76E-2
GO:0045449	regulation of transcription	RLF,FOXO1,FOXO3,EP300,RARG,ACVR1B,CREB1,CLOCK,SNAI2,RPS3,PDCD4,FOXF2,TSC22D3,UBP1,MITF,CBX6,SMAD4,RBM15B,BRIP1,USP16,ETV3,PFN1,	1.80E-2
GO:0070482	response to oxygen levels	BCL2,EP300,SMAD4,ACTN4,CDKN1A,	3.10E-2
GO:0051252	regulation of RNA metabolic process	FOXO1,FOXO3,EP300,RARG,CREB1,CLOCK,SNAI2,FOXF2,TSC22D3,UBP1,MITF,SMAD4,RBM15B,USP16,BRIP1,ETV3,PFN1,	3.17E-2
GO:0040008	regulation of growth	BCL2,EP300,ACVR1B,FGF9,SMAD4,CREB1,CDKN1A,	3.29E-2
GO:0016481	negative regulation of transcription	FOXF2,UBP1,RARG,SMAD4,RBM15B,SNAI2,ETV3,PDCD4,	3.33E-2
GO:0032268	regulation of cellular protein metabolic process	BCL2,EP300,CASC3,CPEB1,CCND2,SMAD4,RPS4X,PDCD4,	3.97E-2
GO:0000278	mitotic cell cycle	RCC2,BCL2,ACVR1B,CCND2,CDKN1A,USP16,STAG2,	4.90E-2
GO:0007049	cell cycle	RCC2,BCL2,EP300,ACVR1B,EVI5,CYLD,CCND2,CDKN1A,USP16,STAG2,	5.44E-2
GO:0010629	negative regulation of gene expression	FOXF2,UBP1,RARG,SMAD4,RBM15B,SNAI2,ETV3,PDCD4,	5.55E-2
GO:0006355	regulation of transcription, DNA-dependent	FOXO1,FOXO3,EP300,RARG,CLOCK,CREB1,SNAI2,FOXF2,TSC22D3,UBP1,MITF,SMAD4,USP16,BRIP1,ETV3,PFN1,	6.56E-2
GO:0030308	negative regulation of cell growth	BCL2,ACVR1B,SMAD4,CDKN1A,	7.17E-2
GO:0022403	cell cycle phase	RCC2,BCL2,ACVR1B,CCND2,CDKN1A,USP16,STAG2,	8.37E-2
GO:0010558	negative regulation of macromolecule biosynthetic process	FOXF2,UBP1,RARG,SMAD4,RBM15B,SNAI2,ETV3,PDCD4,	8.57E-2
GO:0045792	negative regulation of cell size	BCL2,ACVR1B,SMAD4,CDKN1A,	8.76E-2
GO:0006414	translational elongation	RPL5,RPS4X,RPS3,RPS6,	9.26E-2
GO:0001558	regulation of cell growth	BCL2,EP300,ACVR1B,SMAD4,CDKN1A,	9.51E-2
GO:0051329	interphase of mitotic cell cycle	BCL2,ACVR1B,CCND2,CDKN1A,	9.76E-2
GO:0031327	negative regulation of cellular biosynthetic process	FOXF2,UBP1,RARG,SMAD4,RBM15B,SNAI2,ETV3,PDCD4,	9.77E-2
GO:0043065	positive regulation of apoptosis	BCL2,FOXO3,RARG,ACVR1B,CDKN1A,RPS3,RPS6,	9.99E-2

KEGG pathways and Gene Ontology terms enriched for the interacted genes of ncRNA from RAID and miRTarBase.

disease name	related genes	p-value