ncRNADetailInformation

Detail Information
Functional analysis

miRNA name

pre-miRNA

family

pre-miRNA Sequence

mature-miRNA

mature sequence

pre-miRNA description

miR-17-5p

MI0000071	MIPF0000001	GUCAGAAUAAUGUCAAAGUGCUUACAGUGCAGGUAGUGAUAUGUGCAUCUACUGCAGUGAAGGCACUUGUAGCAUUAUGGUGAC	MIMAT0000070 hsa-miR-17-5p	CAAAGUGCUUACAGUGCAGGUAG
MI0000071	MIPF0000001	GUCAGAAUAAUGUCAAAGUGCUUACAGUGCAGGUAGUGAUAUGUGCAUCUACUGCAGUGAAGGCACUUGUAGCAUUAUGGUGAC	MIMAT0000070 hsa-miR-17-5p	CAAAGUGCUUACAGUGCAGGUAG
MI0000071	MIPF0000001	GUCAGAAUAAUGUCAAAGUGCUUACAGUGCAGGUAGUGAUAUGUGCAUCUACUGCAGUGAAGGCACUUGUAGCAUUAUGGUGAC	MIMAT0000070 hsa-miR-17-5p	CAAAGUGCUUACAGUGCAGGUAG
MI0000071	MIPF0000001	GUCAGAAUAAUGUCAAAGUGCUUACAGUGCAGGUAGUGAUAUGUGCAUCUACUGCAGUGAAGGCACUUGUAGCAUUAUGGUGAC	MIMAT0000070 hsa-miR-17-5p	CAAAGUGCUUACAGUGCAGGUAG
MI0000071	MIPF0000001	GUCAGAAUAAUGUCAAAGUGCUUACAGUGCAGGUAGUGAUAUGUGCAUCUACUGCAGUGAAGGCACUUGUAGCAUUAUGGUGAC	MIMAT0000070 hsa-miR-17-5p	CAAAGUGCUUACAGUGCAGGUAG
MI0000071	MIPF0000001	GUCAGAAUAAUGUCAAAGUGCUUACAGUGCAGGUAGUGAUAUGUGCAUCUACUGCAGUGAAGGCACUUGUAGCAUUAUGGUGAC	MIMAT0000070 hsa-miR-17-5p	CAAAGUGCUUACAGUGCAGGUAG
MI0000071	MIPF0000001	GUCAGAAUAAUGUCAAAGUGCUUACAGUGCAGGUAGUGAUAUGUGCAUCUACUGCAGUGAAGGCACUUGUAGCAUUAUGGUGAC	MIMAT0000070 hsa-miR-17-5p	CAAAGUGCUUACAGUGCAGGUAG
MI0000071	MIPF0000001	GUCAGAAUAAUGUCAAAGUGCUUACAGUGCAGGUAGUGAUAUGUGCAUCUACUGCAGUGAAGGCACUUGUAGCAUUAUGGUGAC	MIMAT0000070 hsa-miR-17-5p	CAAAGUGCUUACAGUGCAGGUAG
MI0000071	MIPF0000001	GUCAGAAUAAUGUCAAAGUGCUUACAGUGCAGGUAGUGAUAUGUGCAUCUACUGCAGUGAAGGCACUUGUAGCAUUAUGGUGAC	MIMAT0000070 hsa-miR-17-5p	CAAAGUGCUUACAGUGCAGGUAG
MI0000071	MIPF0000001	GUCAGAAUAAUGUCAAAGUGCUUACAGUGCAGGUAGUGAUAUGUGCAUCUACUGCAGUGAAGGCACUUGUAGCAUUAUGGUGAC	MIMAT0000070 hsa-miR-17-5p	CAAAGUGCUUACAGUGCAGGUAG
MI0000071	MIPF0000001	GUCAGAAUAAUGUCAAAGUGCUUACAGUGCAGGUAGUGAUAUGUGCAUCUACUGCAGUGAAGGCACUUGUAGCAUUAUGGUGAC	MIMAT0000070 hsa-miR-17-5p	CAAAGUGCUUACAGUGCAGGUAG
MI0000071	MIPF0000001	GUCAGAAUAAUGUCAAAGUGCUUACAGUGCAGGUAGUGAUAUGUGCAUCUACUGCAGUGAAGGCACUUGUAGCAUUAUGGUGAC	MIMAT0000070 hsa-miR-17-5p	CAAAGUGCUUACAGUGCAGGUAG
MI0000071	MIPF0000001	GUCAGAAUAAUGUCAAAGUGCUUACAGUGCAGGUAGUGAUAUGUGCAUCUACUGCAGUGAAGGCACUUGUAGCAUUAUGGUGAC	MIMAT0000070 hsa-miR-17-5p	CAAAGUGCUUACAGUGCAGGUAG
MI0000071	MIPF0000001	GUCAGAAUAAUGUCAAAGUGCUUACAGUGCAGGUAGUGAUAUGUGCAUCUACUGCAGUGAAGGCACUUGUAGCAUUAUGGUGAC	MIMAT0000070 hsa-miR-17-5p	CAAAGUGCUUACAGUGCAGGUAG
MI0000071	MIPF0000001	GUCAGAAUAAUGUCAAAGUGCUUACAGUGCAGGUAGUGAUAUGUGCAUCUACUGCAGUGAAGGCACUUGUAGCAUUAUGGUGAC	MIMAT0000070 hsa-miR-17-5p	CAAAGUGCUUACAGUGCAGGUAG
MI0000071	MIPF0000001	GUCAGAAUAAUGUCAAAGUGCUUACAGUGCAGGUAGUGAUAUGUGCAUCUACUGCAGUGAAGGCACUUGUAGCAUUAUGGUGAC	MIMAT0000070 hsa-miR-17-5p	CAAAGUGCUUACAGUGCAGGUAG
MI0000071	MIPF0000001	GUCAGAAUAAUGUCAAAGUGCUUACAGUGCAGGUAGUGAUAUGUGCAUCUACUGCAGUGAAGGCACUUGUAGCAUUAUGGUGAC	MIMAT0000070 hsa-miR-17-5p	CAAAGUGCUUACAGUGCAGGUAG
MI0000071	MIPF0000001	GUCAGAAUAAUGUCAAAGUGCUUACAGUGCAGGUAGUGAUAUGUGCAUCUACUGCAGUGAAGGCACUUGUAGCAUUAUGGUGAC	MIMAT0000070 hsa-miR-17-5p	CAAAGUGCUUACAGUGCAGGUAG
MI0000071	MIPF0000001	GUCAGAAUAAUGUCAAAGUGCUUACAGUGCAGGUAGUGAUAUGUGCAUCUACUGCAGUGAAGGCACUUGUAGCAUUAUGGUGAC	MIMAT0000070 hsa-miR-17-5p	CAAAGUGCUUACAGUGCAGGUAG
MI0000071	MIPF0000001	GUCAGAAUAAUGUCAAAGUGCUUACAGUGCAGGUAGUGAUAUGUGCAUCUACUGCAGUGAAGGCACUUGUAGCAUUAUGGUGAC	MIMAT0000070 hsa-miR-17-5p	CAAAGUGCUUACAGUGCAGGUAG

link to database

TargetScanS 6.2 | MicroCosm | microRNA.org | miRNAMap 2.0

Interacted genes from RAID,miRTarBase

TSC2,KDM4A,XIAP,MORF4L2,NPAT,C7orf44,ISL1,WEE1,CPSF1,PPP1CA,CPE,MTRF1L,GPR137B,RPS27A,ZNF689
more » TSC2,KDM4A,XIAP,MORF4L2,NPAT,C7orf44,ISL1,WEE1,CPSF1,PPP1CA,CPE,MTRF1L,GPR137B,RPS27A,ZNF689,HIST2H2AA3,RUNX1,MUC17,COX2,KAT2B,RAB23,TJP1,MAPK9,MAP3K9,AZIN1,TNPO3,MED12,USP38,MAP3K12,CAMTA1,FASN,RYR2,PLS1,RBM5,TCEA2,NCOA3,EHMT2,TRAP1,HTT,OFD1,GDF11,ARPC2,PDLIM5,ARHGAP10,ANKRD27,ZBTB5,MNT,HSPB2,TUBB4B,NPAS2,PTTG1,APP,CCND1,ENPP5,WAC,OBFC2A,SEPT11,TMEM9,GAPDH,RNF145,E2F3,MEF2D,ARL9,ELP2,CCL1,BACE1,PLAG1,PSD3,BTN3A1,EIF4G3,UBE4A,ATP5B,NFAT5,MBNL1,TRIM44,ICAM1,IRAK1,HUWE1,TMSB10,COX7B,C15orf41,PDPK1,ZC3H18,BLVRA,ATP6,PLEKHM1,TRIM11,CDKN1A,NUFIP2,MRPS6,SUOX,DHX33,TXLNA,NOC2L,TBC1D15,PCGF5,PBXIP1,BAZ2A,SELE,PELI1,VEGFA,RAB5B,TRUB1,MED13,OPTN,FBXO28,PER1,HDAC10,SEPT2,RLF,RB1,TUT1,PTENP1,PIGS,AMD1,TMTC4,ZNFX1,EIF4G2,ATXN7,UBE2S,RNF146,KCTD7,STIL,CHD4,GANAB,CLPTM1,ARHGAP5,ND2,RPSA,SMAD3,RBL1,ACOT2,MUC21,TMEM188,SMAD4,CHTF8,ZNF507,TRIM71,BMPR2,MAP3K8,POGZ,SIRPA,TNFAIP1,FAM82B,HSP90AA1,FBXO31,VPRBP,HIST3H2A,RTCD1,MOB1B,CPS1,TNFRSF10B,PRICKLE1,FXR2,RPS15A,E2F1,PKD2,PCNX,UBE2C,PGAM1,MYCBP2,GNB1,PLXNA1,EPB41L2,SLC25A37,LPIN1,CETN2,HEXIM1,ELMO2,SLC16A2,PIK3CA,TRA2B,GDAP1,EARS2,NONO,MKI67,EFHC1,SLC25A28,SON,TRRAP,LSM14A,TMED10,TBX1,KIAA1919,RUNDC1,DNAJC27,ZNF598,RTN3,TP53INP1,CCDC47,NOTCH2,TMEM165,TGFBR2,THBS1,COPS3,MYC,MMP2,MGEA5,MRPL40,CCND2,BCL2L11,EPB41L5,ADARB1,HIST1H2AM,FANCA,E2F3P1,HIF1A,QARS,IGFBP5,GPX2,GPI,ZBTB4,RTTN,PTPRO,ZIK1,FTH1,TMEM19,SDHA,TEFM,ASNS,HIST1H4C,TXNIP,RBM12B,MLL,PTBP1,ATF3,CBL,DCBLD2,JAK1,LCOR,PRPF8,DEPDC1,TCF3,KIF5C,CHST14,OLIG2,POGK,RBL2,FAM8A1,REEP5,EEF1A1,DCTPP1,HBP1,PTEN,ERCC2,KAT2A,APEX1,RPL21,RPL7,ILF3,YES1,NAT8L,ND4,LARP1,H3F3AP6,ZBED3,ATRX,SLC25A3,SYNDIG1,KIAA1267,TNFSF12,DPYSL2,NUCKS1,HNRNPU,LAPTM4A,ARIH1,TXNRD2,TRIM8,GPM6A,C5orf43,FOPNL,WDR82,SOX4,LAS1L,TAF9B,RPL37,MDK,AK1,NBR1,SH3GLB2,CCT6A,STK11,ZSWIM3,SIPA1L3,BCL2,UBE3C,NAGK,ABI2,ERLIN1,HIST2H4B,DAPK3,GNAS,NAP1L1,PPP1R15A,RALGAPA1,CTSA,TOB1,HIST2H3A,ASH1L,IMMT,SOD2,CANX,HDHD1,PAIP1,UQCRFS1,CAP1,PPP2R1A,PIK3R3,HN1,FER,GLO1,SURF4,KIF1A,WASL,EIF2C1,ARHGEF7,SLC35E2B,DCUN1D4,MFHAS1,MTF1,DNMBP,NPAS3,MEN1,NAPEPLD,MTMR3,RND3

KEGG pathways enriched for interacted genes

pathway name

pathway description

target genes enrich in pathway

p-value

hsa05220	Chronic myeloid leukemia	RUNX1,CCND1,PIK3R3,E2F1,CBL,RB1,CDKN1A,E2F3,PIK3CA,SMAD3,SMAD4,TGFBR2,MYC,	3.99E-7
hsa05219	Bladder cancer	CCND1,MMP2,E2F1,VEGFA,RB1,CDKN1A,DAPK3,E2F3,MYC,THBS1,	9.37E-7
hsa05212	Pancreatic cancer	MAPK9,CCND1,PIK3CA,E2F1,PIK3R3,VEGFA,SMAD3,SMAD4,TGFBR2,RB1,JAK1,E2F3,	2.00E-6
hsa05200	Pathways in cancer	MAPK9,RUNX1,CCND1,MMP2,PTEN,E2F1,BCL2,PIK3R3,PTENP1,HIF1A,CBL,RB1,XIAP,JAK1,CDKN1A,E2F3,PIK3CA,VEGFA,HSP90AA1,SMAD3,SMAD4,TGFBR2,DAPK3,MYC,	3.27E-5
hsa04110	Cell cycle	CCND1,E2F1,WEE1,RB1,CDKN1A,E2F3,PTTG1,RBL2,SMAD3,SMAD4,RBL1,CCND2,MYC,	8.82E-5

hsa05215	Prostate cancer	CCND1,PIK3CA,PTEN,E2F1,PIK3R3,BCL2,HSP90AA1,PTENP1,PDPK1,RB1,CDKN1A,E2F3,	9.36E-5
hsa05222	Small cell lung cancer	CCND1,PIK3CA,PTEN,E2F1,PIK3R3,BCL2,PTENP1,RB1,XIAP,E2F3,MYC,	3.05E-4
hsa05214	Glioma	CCND1,PIK3CA,PTEN,E2F1,PIK3R3,PTENP1,RB1,CDKN1A,E2F3,	1.16E-2
hsa05210	Colorectal cancer	MAPK9,CCND1,PIK3CA,PIK3R3,BCL2,SMAD3,SMAD4,TGFBR2,MYC,	1.45E-2
hsa04350	TGF-beta signaling pathway	BMPR2,PPP2R1A,SMAD3,RBL2,SMAD4,RBL1,TGFBR2,MYC,THBS1,	1.82E-2
hsa04150	mTOR signaling pathway	PIK3CA,PIK3R3,VEGFA,HIF1A,TSC2,PDPK1,STK11,	2.16E-2
hsa05218	Melanoma	CCND1,PIK3CA,PTEN,E2F1,PIK3R3,PTENP1,RB1,CDKN1A,E2F3,	2.35E-2
hsa05223	Non-small cell lung cancer	CCND1,PIK3CA,E2F1,PIK3R3,PDPK1,RB1,E2F3,	2.63E-2
hsa04510	Focal adhesion	CCND1,MAPK9,PTEN,BCL2,PIK3R3,ARHGAP5,PTENP1,PDPK1,XIAP,PIK3CA,VEGFA,PPP1CA,CCND2,THBS1,	5.98E-2
hsa04115	p53 signaling pathway	CCND1,PTEN,TNFRSF10B,TSC2,PTENP1,CCND2,CDKN1A,THBS1,	8.29E-2
hsa05213	Endometrial cancer	CCND1,PIK3CA,PTEN,PIK3R3,PTENP1,PDPK1,MYC,	1.10E-1
hsa04520	Adherens junction	WASL,YES1,SMAD3,SMAD4,TGFBR2,FER,TJP1,	1.48E-1
hsa04310	Wnt signaling pathway	MAPK9,CCND1,PPP2R1A,PRICKLE1,SMAD3,NFAT5,CCND2,SMAD4,MYC,	4.33E-1
hsa05012	Parkinson's disease	ND4,ATP6,ATP5B,ND2,SDHA,COX2,COX7B,UQCRFS1,	4.95E-1
hsa00190	Oxidative phosphorylation	ND4,ATP6,ATP5B,ND2,SDHA,COX2,COX7B,UQCRFS1,	5.30E-1
hsa04910	Insulin signaling pathway	MAPK9,PIK3CA,PIK3R3,FASN,PPP1CA,TSC2,PDPK1,CBL,	6.25E-1
hsa05010	Alzheimer's disease	ATP6,ATP5B,SDHA,GAPDH,COX2,COX7B,UQCRFS1,BACE1,APP,	6.26E-1
hsa05221	Acute myeloid leukemia	CCND1,RUNX1,PIK3CA,PIK3R3,MYC,	6.41E-1
hsa04210	Apoptosis	PIK3CA,PIK3R3,BCL2,TNFRSF10B,XIAP,IRAK1,	7.65E-1
hsa04012	ErbB signaling pathway	MAPK9,PIK3CA,PIK3R3,CBL,CDKN1A,MYC,	7.65E-1
hsa03010	Ribosome	RPS15A,RPL21,RPSA,RPL37,RPL7,RPS27A,	7.65E-1

Gene ontology terms enriched for interacted genes

GO terms

GO terms description

target genes enrich in GO term

p-value

GO:0007049	cell cycle	PKD2,ILF3,E2F1,NOTCH2,SEPT2,STK11,CDKN1A,TCF3,CETN2,FANCA,NPAT,CCND1,AK1,BCL2,UBE2C,FBXO31,KAT2B,PPP1R15A,HBP1,WEE1,RB1,MAP3K8,SEPT11,MLL,RPS27A,E2F3,PTTG1,APP,EIF4G2,TXNIP,TP53INP1,CHTF8,MKI67,PPP1CA,SMAD3,MEN1,RBL2,CCND2,RBL1,THBS1,MYC,	7.84E-9
GO:0007050	cell cycle arrest	PKD2,AK1,KAT2B,NOTCH2,PPP1R15A,HBP1,RB1,STK11,CDKN1A,EIF4G2,TP53INP1,SMAD3,MEN1,THBS1,MYC,	8.98E-9
GO:0006325	chromatin organization	CHD4,H3F3AP6,KAT2A,EHMT2,BAZ2A,HIST3H2A,ATXN7,HIST1H4C,HIST2H4B,KAT2B,ASH1L,NAP1L1,RB1,MLL,MAP3K12,HUWE1,RBL2,MEN1,HIST2H2AA3,RBL1,HIST1H2AM,TRRAP,HDAC10,KDM4A,DAPK3,HIST2H3A,MORF4L2,	6.44E-8
GO:0022402	cell cycle process	PKD2,ILF3,E2F1,NOTCH2,SEPT2,STK11,CDKN1A,TCF3,CETN2,FANCA,NPAT,CCND1,AK1,BCL2,UBE2C,KAT2B,PPP1R15A,HBP1,WEE1,RB1,RPS27A,APP,PTTG1,EIF4G2,TP53INP1,MKI67,SMAD3,MEN1,CCND2,MYC,THBS1,	3.79E-7
GO:0051726	regulation of cell cycle	CCND1,PTEN,E2F1,BCL2,UBE2C,FBXO31,TSC2,PTENP1,RB1,CDKN1A,APP,ERCC2,RPS15A,TCF3,ASNS,HEXIM1,SMAD3,MEN1,CCND2,MYCBP2,TRRAP,MNT,MYC,OBFC2A,	3.79E-7

GO:0051173	positive regulation of nitrogen compound metabolic process	RUNX1,MED13,ILF3,E2F1,MED12,MTF1,SOX4,TNFSF12,NCOA3,ICAM1,ERCC2,TCF3,VEGFA,HSP90AA1,ATXN7,IRAK1,NPAS2,ISL1,SOD2,HIF1A,RB1,MLL,RPS27A,E2F3,APP,TBX1,SMAD3,NFAT5,MEN1,SMAD4,MGEA5,MORF4L2,MYC,	6.60E-7
GO:0042127	regulation of cell proliferation	NOTCH2,SOX4,PTENP1,TSC2,TNFSF12,STK11,CDKN1A,GDF11,RPS15A,TCF3,VEGFA,FANCA,TGFBR2,CCND1,BMPR2,TOB1,RBM5,PTEN,BCL2,SOD2,KAT2B,ARHGAP5,NAP1L1,HIF1A,IGFBP5,RB1,MLL,E2F3,TXNIP,ATF3,FTH1,SMAD3,MEN1,CCND2,SMAD4,MNT,THBS1,MYC,	9.03E-7
GO:0051276	chromosome organization	CHD4,H3F3AP6,KAT2A,EHMT2,BAZ2A,HIST3H2A,ATXN7,HIST1H4C,HIST2H4B,KAT2B,ASH1L,NAP1L1,RB1,MLL,MAP3K12,PTTG1,HUWE1,RBL2,MEN1,HIST2H2AA3,HIST1H2AM,RBL1,TRRAP,HDAC10,KDM4A,DAPK3,HIST2H3A,MORF4L2,	2.00E-6
GO:0010604	positive regulation of macromolecule metabolic process	RUNX1,ILF3,MED13,MED12,E2F1,MTF1,SOX4,SELE,TNFSF12,NCOA3,ERCC2,TCF3,VEGFA,ATXN7,IRAK1,CCND1,BMPR2,MAPK9,NPAS2,ISL1,BCL2,UBE2C,HIF1A,RB1,MLL,RPS27A,E2F3,APP,TBX1,SMAD3,NFAT5,MEN1,CCND2,MGEA5,SMAD4,MORF4L2,THBS1,MYC,	2.47E-6
GO:0006357	regulation of transcription from RNA polymerase II promoter	RUNX1,MED13,E2F1,MED12,MTF1,CHD4,LCOR,KAT2A,ERCC2,TAF9B,ELP2,TCF3,VEGFA,HEXIM1,ATXN7,NPAT,ISL1,NPAS2,SOD2,HIF1A,RB1,OLIG2,MLL,APP,TBX1,TCEA2,SMAD3,NFAT5,MEN1,RBL1,SMAD4,HDAC10,MORF4L2,MYC,	3.16E-6
GO:0045893	positive regulation of transcription, DNA-dependent	RUNX1,MED13,ILF3,E2F1,MED12,MTF1,SOX4,NCOA3,ERCC2,TCF3,VEGFA,ATXN7,ISL1,NPAS2,HIF1A,RB1,MLL,E2F3,APP,TBX1,MEN1,SMAD3,NFAT5,SMAD4,MYC,MORF4L2,	4.75E-6
GO:0016568	chromatin modification	KAT2B,ASH1L,CHD4,RB1,MLL,MAP3K12,KAT2A,EHMT2,HUWE1,BAZ2A,ATXN7,RBL2,MEN1,RBL1,TRRAP,HDAC10,KDM4A,DAPK3,MORF4L2,	5.28E-6
GO:0051254	positive regulation of RNA metabolic process	RUNX1,MED13,ILF3,E2F1,MED12,MTF1,SOX4,NCOA3,ERCC2,TCF3,VEGFA,ATXN7,ISL1,NPAS2,HIF1A,RB1,MLL,E2F3,APP,TBX1,MEN1,SMAD3,NFAT5,SMAD4,MYC,MORF4L2,	5.55E-6
GO:0010628	positive regulation of gene expression	RUNX1,ILF3,MED13,E2F1,MED12,MTF1,SOX4,NCOA3,ERCC2,TCF3,VEGFA,ATXN7,IRAK1,MAPK9,ISL1,NPAS2,HIF1A,RB1,MLL,RPS27A,E2F3,APP,TBX1,SMAD3,NFAT5,MEN1,SMAD4,MYC,MORF4L2,	6.21E-6
GO:0031328	positive regulation of cellular biosynthetic process	RUNX1,ILF3,MED13,E2F1,MED12,MTF1,SOX4,NCOA3,ICAM1,ERCC2,TCF3,VEGFA,HSP90AA1,ATXN7,IRAK1,ISL1,NPAS2,SOD2,HIF1A,RB1,MLL,RPS27A,E2F3,APP,TBX1,SMAD3,NFAT5,MEN1,SMAD4,MORF4L2,MYC,THBS1,	6.91E-6
GO:0043065	positive regulation of apoptosis	NOTCH2,SOX4,PTENP1,TNFSF12,CDKN1A,RYR2,ERCC2,TUBB4B,PPP2R1A,TNFRSF10B,BCL2L11,MAPK9,PTEN,RBM5,BCL2,ARHGEF7,RPS27A,APP,TXNIP,TP53INP1,MEN1,SMAD3,DAPK3,MYC,HTT,	8.36E-6
GO:0045935	positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	RUNX1,MED13,ILF3,E2F1,MED12,MTF1,SOX4,TNFSF12,NCOA3,ERCC2,TCF3,VEGFA,ATXN7,IRAK1,ISL1,NPAS2,HIF1A,RB1,MLL,RPS27A,E2F3,APP,TBX1,SMAD3,NFAT5,MEN1,SMAD4,MGEA5,MORF4L2,MYC,	8.45E-6
GO:0045944	positive regulation of transcription from RNA polymerase II promoter	RUNX1,ISL1,NPAS2,MED13,E2F1,MED12,MTF1,HIF1A,RB1,MLL,APP,ERCC2,TCF3,TBX1,VEGFA,ATXN7,SMAD3,NFAT5,MEN1,SMAD4,MORF4L2,MYC,	8.82E-6
GO:0009891	positive regulation of biosynthetic process	RUNX1,ILF3,MED13,E2F1,MED12,MTF1,SOX4,NCOA3,ICAM1,ERCC2,TCF3,VEGFA,HSP90AA1,ATXN7,IRAK1,ISL1,NPAS2,SOD2,HIF1A,RB1,MLL,RPS27A,E2F3,APP,TBX1,SMAD3,NFAT5,MEN1,SMAD4,MORF4L2,MYC,THBS1,	9.24E-6
GO:0043068	positive regulation of programmed cell death	NOTCH2,SOX4,PTENP1,TNFSF12,CDKN1A,RYR2,ERCC2,TUBB4B,PPP2R1A,TNFRSF10B,BCL2L11,MAPK9,PTEN,RBM5,BCL2,ARHGEF7,RPS27A,APP,TXNIP,TP53INP1,MEN1,SMAD3,DAPK3,MYC,HTT,	9.35E-6
GO:0010942	positive regulation of cell death	NOTCH2,SOX4,PTENP1,TNFSF12,CDKN1A,RYR2,ERCC2,TUBB4B,PPP2R1A,TNFRSF10B,BCL2L11,MAPK9,PTEN,RBM5,BCL2,ARHGEF7,RPS27A,APP,TXNIP,TP53INP1,MEN1,SMAD3,DAPK3,MYC,HTT,	1.00E-5
GO:0042981	regulation of apoptosis	NOTCH2,SOX4,PTENP1,TNFSF12,XIAP,CDKN1A,RYR2,ERCC2,TAF9B,TUBB4B,VEGFA,PPP2R1A,TNFRSF10B,IRAK1,BCL2L11,MAPK9,RBM5,PTEN,BCL2,SOD2,ARHGEF7,RPS27A,GLO1,APP,PIK3CA,TXNIP,TP53INP1,ASNS,SMAD3,MEN1,DAPK3,SON,MNT,MYC,THBS1,HTT,	1.02E-5
GO:0045941	positive regulation of transcription	RUNX1,MED13,ILF3,E2F1,MED12,MTF1,SOX4,NCOA3,ERCC2,TCF3,VEGFA,ATXN7,IRAK1,ISL1,NPAS2,HIF1A,RB1,MLL,RPS27A,E2F3,APP,TBX1,NFAT5,SMAD3,MEN1,SMAD4,MYC,MORF4L2,	1.03E-5
GO:0043067	regulation of programmed cell death	NOTCH2,SOX4,PTENP1,TNFSF12,XIAP,CDKN1A,RYR2,ERCC2,TAF9B,TUBB4B,VEGFA,PPP2R1A,TNFRSF10B,IRAK1,BCL2L11,MAPK9,RBM5,PTEN,BCL2,SOD2,ARHGEF7,RPS27A,GLO1,APP,PIK3CA,TXNIP,TP53INP1,ASNS,SMAD3,MEN1,DAPK3,SON,MNT,MYC,THBS1,HTT,	1.26E-5
GO:0010941	regulation of cell death	NOTCH2,SOX4,PTENP1,TNFSF12,XIAP,CDKN1A,RYR2,ERCC2,TAF9B,TUBB4B,VEGFA,PPP2R1A,TNFRSF10B,IRAK1,BCL2L11,MAPK9,RBM5,PTEN,BCL2,SOD2,ARHGEF7,RPS27A,GLO1,APP,PIK3CA,TXNIP,TP53INP1,ASNS,SMAD3,MEN1,DAPK3,SON,MNT,MYC,THBS1,HTT,	1.36E-5
GO:0008285	negative regulation of cell proliferation	TOB1,RBM5,PTEN,BCL2,SOD2,NOTCH2,KAT2B,TSC2,PTENP1,IGFBP5,RB1,STK11,CDKN1A,MLL,GDF11,FTH1,SMAD3,MEN1,SMAD4,TGFBR2,MNT,THBS1,	1.99E-5
GO:0006917	induction of apoptosis	MAPK9,PTEN,NOTCH2,ARHGEF7,PTENP1,TNFSF12,RYR2,CDKN1A,RPS27A,APP,ERCC2,TUBB4B,TP53INP1,PPP2R1A,TNFRSF10B,SMAD3,BCL2L11,DAPK3,MYC,HTT,	4.27E-5
GO:0012502	induction of programmed cell death	MAPK9,PTEN,NOTCH2,ARHGEF7,PTENP1,TNFSF12,RYR2,CDKN1A,RPS27A,APP,ERCC2,TUBB4B,TP53INP1,PPP2R1A,TNFRSF10B,SMAD3,BCL2L11,DAPK3,MYC,HTT,	4.46E-5
GO:0043066	negative regulation of apoptosis	PTEN,BCL2,SOD2,NOTCH2,SOX4,PTENP1,XIAP,CDKN1A,RPS27A,GLO1,ERCC2,TAF9B,PIK3CA,VEGFA,ASNS,SMAD3,IRAK1,SON,MYC,THBS1,HTT,	4.99E-5
GO:0010557	positive regulation of macromolecule biosynthetic process	RUNX1,ILF3,MED13,E2F1,MED12,MTF1,SOX4,NCOA3,ERCC2,TCF3,VEGFA,ATXN7,IRAK1,ISL1,NPAS2,HIF1A,RB1,MLL,RPS27A,E2F3,APP,TBX1,SMAD3,NFAT5,MEN1,SMAD4,MYC,THBS1,MORF4L2,	5.34E-5
GO:0043069	negative regulation of programmed cell death	PTEN,BCL2,SOD2,NOTCH2,SOX4,PTENP1,XIAP,CDKN1A,RPS27A,GLO1,ERCC2,TAF9B,PIK3CA,VEGFA,ASNS,SMAD3,IRAK1,SON,MYC,THBS1,HTT,	5.98E-5
GO:0060548	negative regulation of cell death	PTEN,BCL2,SOD2,NOTCH2,SOX4,PTENP1,XIAP,CDKN1A,RPS27A,GLO1,ERCC2,TAF9B,PIK3CA,VEGFA,ASNS,SMAD3,IRAK1,SON,MYC,THBS1,HTT,	6.25E-5
GO:0043933	macromolecular complex subunit organization	ABI2,MTRF1L,MED13,MED12,TSC2,H3F3AP6,ERCC2,TAF9B,TUBB4B,HSP90AA1,HIST3H2A,PPP2R1A,HIST1H4C,FANCA,HIST2H4B,IRAK1,MBNL1,RBM5,SOD2,WASL,NAP1L1,SEPT11,MLL,E2F3,DCTPP1,SMAD3,HIST2H2AA3,HIST1H2AM,SMAD4,MYC,HIST2H3A,	8.93E-5
GO:0019220	regulation of phosphate metabolic process	BMPR2,CCND1,PTEN,BCL2,TSC2,PTENP1,MAP3K9,PDPK1,RB1,CDKN1A,APP,TNFRSF10B,PPP2R1A,ATXN7,HEXIM1,SMAD3,RBL2,MEN1,CCND2,SMAD4,RBL1,TGFBR2,IRAK1,THBS1,	1.54E-4
GO:0051174	regulation of phosphorus metabolic process	BMPR2,CCND1,PTEN,BCL2,TSC2,PTENP1,MAP3K9,PDPK1,RB1,CDKN1A,APP,TNFRSF10B,PPP2R1A,ATXN7,HEXIM1,SMAD3,RBL2,MEN1,CCND2,SMAD4,RBL1,TGFBR2,IRAK1,THBS1,	1.54E-4
GO:0006351	transcription, DNA-dependent	BMPR2,MED13,MED12,APEX1,ASH1L,HIF1A,LCOR,MLL,E2F3,KAT2A,PTTG1,TAF9B,ERCC2,TCEA2,NFAT5,MNT,MYC,	1.55E-4
GO:0006366	transcription from RNA polymerase II promoter	BMPR2,MED13,MED12,APEX1,ASH1L,HIF1A,LCOR,MLL,E2F3,PTTG1,KAT2A,ERCC2,NFAT5,MNT,MYC,	1.60E-4
GO:0065003	macromolecular complex assembly	MED13,MED12,TSC2,H3F3AP6,ERCC2,TAF9B,TUBB4B,HIST3H2A,HSP90AA1,PPP2R1A,HIST1H4C,FANCA,HIST2H4B,IRAK1,MBNL1,RBM5,SOD2,WASL,NAP1L1,SEPT11,MLL,E2F3,DCTPP1,SMAD3,HIST2H2AA3,HIST1H2AM,SMAD4,MYC,HIST2H3A,	1.74E-4
GO:0032774	RNA biosynthetic process	BMPR2,MED13,MED12,APEX1,ASH1L,HIF1A,LCOR,MLL,E2F3,KAT2A,PTTG1,TAF9B,ERCC2,TCEA2,NFAT5,MNT,MYC,	1.81E-4
GO:0010608	posttranscriptional regulation of gene expression	PTEN,BCL2,SOX4,EIF2C1,PTENP1,PPP1R15A,IGFBP5,EIF4G3,APP,EIF4G2,VEGFA,PAIP1,SMAD3,HNRNPU,THBS1,	2.06E-4
GO:0006350	transcription	MEF2D,MED13,MED12,E2F1,RLF,MTF1,NOTCH2,CHD4,SOX4,ZBTB5,KAT2A,TCF3,ATXN7,HEXIM1,MYCBP2,PLAG1,NONO,WASL,ZNF507,EIF2C1,HIF1A,RB1,ZIK1,MLL,CAMTA1,TXNIP,NPAS3,SMAD3,RBL2,NFAT5,RBL1,SMAD4,PCGF5,TRRAP,KDM4A,MORF4L2,MYC,RUNX1,ILF3,ZNF689,PER1,NCOA3,LCOR,ZBTB4,TAF9B,ERCC2,ELP2,BAZ2A,NPAT,BMPR2,NPAS2,APEX1,KAT2B,ASH1L,HBP1,OLIG2,E2F3,PTTG1,TBX1,TCEA2,ATF3,HDAC10,MNT,	2.14E-4
GO:0045449	regulation of transcription	MEF2D,MED13,MED12,E2F1,RLF,MTF1,NOTCH2,SOX4,CHD4,ZBTB5,ICAM1,KAT2A,TCF3,HEXIM1,ATXN7,MYCBP2,PLAG1,SOD2,NONO,WASL,ZNF507,EIF2C1,HIF1A,RB1,ZIK1,MLL,CAMTA1,PBXIP1,TXNIP,NPAS3,ATRX,SMAD3,RBL2,NFAT5,MEN1,ZNFX1,RBL1,PCGF5,SMAD4,TRRAP,KDM4A,POGZ,MORF4L2,MYC,RUNX1,ILF3,ZNF689,PER1,NCOA3,LCOR,ZBTB4,ERCC2,TAF9B,ELP2,BAZ2A,VEGFA,PPP2R1A,IRAK1,NPAT,NPAS2,ISL1,POGK,KAT2B,ASH1L,HBP1,OLIG2,E2F3,RPS27A,APP,TBX1,TCEA2,ATF3,HDAC10,MNT,	2.38E-4
GO:0042325	regulation of phosphorylation	BMPR2,CCND1,PTEN,BCL2,TSC2,PTENP1,MAP3K9,PDPK1,RB1,CDKN1A,APP,TNFRSF10B,PPP2R1A,ATXN7,HEXIM1,RBL2,MEN1,CCND2,SMAD4,RBL1,TGFBR2,IRAK1,THBS1,	2.38E-4
GO:0008219	cell death	MEF2D,E2F1,PTENP1,TNFSF12,XIAP,ERCC2,TAF9B,ELMO2,TNFRSF10B,ATXN7,BCL2L11,OPTN,RBM5,PTEN,BCL2,SOD2,ZFYVE26,RTN3,PPP1R15A,MLL,RPS27A,APP,EIF4G2,TP53INP1,SMAD3,MGEA5,DAPK3,MYC,THBS1,HTT,	2.63E-4
GO:0016265	death	MEF2D,E2F1,PTENP1,TNFSF12,XIAP,ERCC2,TAF9B,ELMO2,TNFRSF10B,ATXN7,BCL2L11,OPTN,RBM5,PTEN,BCL2,SOD2,ZFYVE26,RTN3,PPP1R15A,MLL,RPS27A,APP,EIF4G2,TP53INP1,SMAD3,MGEA5,DAPK3,MYC,THBS1,HTT,	2.90E-4
GO:0051893	regulation of focal adhesion formation	PTEN,SMAD3,TSC2,PTENP1,THBS1,	3.57E-4
GO:0070482	response to oxygen levels	ATP6,MMP2,BCL2,SOD2,VEGFA,SMAD3,HIF1A,SMAD4,CDKN1A,RYR2,THBS1,	3.69E-4
GO:0051252	regulation of RNA metabolic process	MEF2D,MED13,E2F1,MED12,NOTCH2,MTF1,CHD4,SOX4,KAT2A,TCF3,ATXN7,HEXIM1,HNRNPU,MBNL1,SOD2,HIF1A,RB1,ZIK1,MLL,ATRX,NPAS3,SMAD3,NFAT5,MEN1,ZNFX1,SMAD4,RBL1,MORF4L2,MYC,RUNX1,ILF3,ZNF689,PER1,NCOA3,LCOR,TAF9B,ERCC2,ELP2,VEGFA,BAZ2A,NPAT,ISL1,NPAS2,RBM5,POGK,KAT2B,OLIG2,E2F3,APP,TBX1,TCEA2,ATF3,PAIP1,HDAC10,MNT,	4.88E-4
GO:0043549	regulation of kinase activity	CCND1,PTEN,PTENP1,TSC2,MAP3K9,PDPK1,RB1,CDKN1A,APP,TNFRSF10B,PPP2R1A,HEXIM1,RBL2,MEN1,CCND2,RBL1,TGFBR2,IRAK1,THBS1,	5.05E-4
GO:0033554	cellular response to stress	MAPK9,BMPR2,CCND1,BCL2,SOD2,NONO,APEX1,FBXO31,PPP1R15A,HIF1A,MAP3K9,XIAP,CDKN1A,MAP3K12,PTTG1,ERCC2,ASNS,ATRX,MEN1,FANCA,CCDC47,MORF4L2,THBS1,OBFC2A,	5.29E-4
GO:0016570	histone modification	HUWE1,BAZ2A,KAT2B,ATXN7,MEN1,TRRAP,KDM4A,HDAC10,MAP3K12,KAT2A,	5.43E-4
GO:0006916	anti-apoptosis	BCL2,SOD2,NOTCH2,XIAP,RPS27A,GLO1,PIK3CA,VEGFA,IRAK1,SON,THBS1,MYC,HTT,	5.96E-4
GO:0010033	response to organic substance	CPS1,SELE,PTENP1,CDKN1A,RYR2,LPIN1,HSPB2,TAF9B,HSP90AA1,PPP2R1A,TGFBR2,IRAK1,CCND1,PTEN,BCL2,PIK3R3,KAT2B,PPP1R15A,PDPK1,GNAS,TXNIP,GNB1,ASNS,SMAD3,CCND2,MGEA5,UQCRFS1,THBS1,MYC,	6.23E-4
GO:0007346	regulation of mitotic cell cycle	CCND1,BCL2,ASNS,UBE2C,FBXO31,SMAD3,RB1,MYCBP2,TRRAP,MYC,APP,	6.69E-4
GO:0016569	covalent chromatin modification	HUWE1,BAZ2A,KAT2B,ATXN7,MEN1,TRRAP,KDM4A,HDAC10,MAP3K12,KAT2A,	6.86E-4
GO:0008633	activation of pro-apoptotic gene products	BCL2,TNFRSF10B,SMAD3,BCL2L11,MYC,	7.21E-4
GO:0032268	regulation of cellular protein metabolic process	BMPR2,CCND1,BCL2,UBE2C,RAB23,EIF2C1,PPP1R15A,MAP3K9,IGFBP5,EIF4G3,MLL,RPS27A,APP,EIF4G2,PPP2R1A,PAIP1,MEN1,CCND2,MGEA5,SMAD4,THBS1,	7.80E-4
GO:0051329	interphase of mitotic cell cycle	NPAT,CCND1,TCF3,E2F1,BCL2,CCND2,RB1,CDKN1A,APP,	7.83E-4
GO:0051338	regulation of transferase activity	CCND1,PTEN,PTENP1,TSC2,MAP3K9,PDPK1,RB1,CDKN1A,APP,TNFRSF10B,PPP2R1A,HEXIM1,RBL2,MEN1,CCND2,RBL1,TGFBR2,IRAK1,THBS1,	8.04E-4
GO:0010038	response to metal ion	MAPK9,CCND1,TXNIP,PTEN,BCL2,TXNRD2,MTF1,PTENP1,RYR2,THBS1,HTT,	8.13E-4
GO:0051325	interphase	NPAT,CCND1,TCF3,E2F1,BCL2,CCND2,RB1,CDKN1A,APP,	9.46E-4
GO:0006091	generation of precursor metabolites and energy	ATP5B,ISL1,PGAM1,SLC25A3,SOD2,CPS1,GNAS,ATP6,ND4,ND2,SDHA,GAPDH,PPP1CA,COX2,UQCRFS1,GPI,	1.00E-2
GO:0048534	hemopoietic or lymphoid organ development	RUNX1,BCL2,SOD2,NOTCH2,SOX4,RB1,MLL,ERCC2,TCF3,TBX1,VEGFA,MEN1,TGFBR2,BCL2L11,	1.47E-2
GO:0012501	programmed cell death	MEF2D,E2F1,PTENP1,TNFSF12,XIAP,TAF9B,ERCC2,ELMO2,TNFRSF10B,BCL2L11,PTEN,RBM5,BCL2,SOD2,RTN3,PPP1R15A,MLL,RPS27A,APP,TP53INP1,SMAD3,DAPK3,THBS1,MYC,HTT,	1.47E-2
GO:0001952	regulation of cell-matrix adhesion	PTEN,BCL2,SMAD3,TSC2,PTENP1,THBS1,	1.60E-2
GO:0009725	response to hormone stimulus	CCND1,PTEN,BCL2,PIK3R3,KAT2B,CPS1,PTENP1,PDPK1,GNAS,CDKN1A,LPIN1,TXNIP,GNB1,CCND2,MGEA5,TGFBR2,UQCRFS1,THBS1,	1.85E-2
GO:0009628	response to abiotic stimulus	PKD2,CCND1,BCL2,SOD2,COPS3,PDPK1,CDKN1A,HSPB2,APP,ERCC2,TXNIP,MEN1,TGFBR2,THBS1,MYC,OBFC2A,HTT,	1.89E-2
GO:0044093	positive regulation of molecular function	CCND1,BCL2,UBE2C,TSC2,HIF1A,SELE,MAP3K9,PDPK1,GNAS,NCOA3,RPS27A,ICAM1,ERCC2,GNB1,TNFRSF10B,CAP1,SMAD3,MEN1,CCND2,TGFBR2,IRAK1,MYC,THBS1,	1.93E-2
GO:0010035	response to inorganic substance	CCND1,MAPK9,PTEN,BCL2,SOD2,MTF1,PTENP1,RYR2,CDKN1A,TXNIP,TXNRD2,THBS1,HTT,	1.93E-2
GO:0009719	response to endogenous stimulus	CCND1,PTEN,BCL2,PIK3R3,CPS1,KAT2B,PTENP1,PDPK1,GNAS,CDKN1A,LPIN1,TXNIP,GNB1,ASNS,CCND2,MGEA5,TGFBR2,UQCRFS1,THBS1,	1.99E-2
GO:0008361	regulation of cell size	DCBLD2,TAF9B,BCL2,NOTCH2,PPP2R1A,ARHGAP5,SMAD3,TSC2,SMAD4,RB1,CDKN1A,APP,	2.00E-2
GO:0032909	regulation of transforming growth factor-beta2 production	SMAD3,HIF1A,SMAD4,	2.11E-2
GO:0032535	regulation of cellular component size	BCL2,NOTCH2,ARHGAP5,TSC2,RB1,CDKN1A,APP,TAF9B,DCBLD2,PPP2R1A,SMAD3,SMAD4,TMSB10,ARPC2,	2.13E-2
GO:0040008	regulation of growth	BCL2,IGFBP5,RB1,CDKN1A,RPS27A,APP,DCBLD2,TAF9B,PIK3CA,PPP2R1A,SMAD3,MEN1,SMAD4,TGFBR2,BCL2L11,MORF4L2,	2.33E-2
GO:0002520	immune system development	RUNX1,BCL2,SOD2,NOTCH2,SOX4,RB1,MLL,ERCC2,TCF3,TBX1,VEGFA,MEN1,TGFBR2,BCL2L11,	2.50E-2
GO:0045859	regulation of protein kinase activity	CCND1,PTEN,PTENP1,TSC2,MAP3K9,PDPK1,RB1,CDKN1A,APP,PPP2R1A,TNFRSF10B,HEXIM1,MEN1,CCND2,TGFBR2,IRAK1,THBS1,	2.60E-2
GO:0051094	positive regulation of developmental process	RUNX1,BMPR2,MAPK9,BCL2,HIF1A,TNFSF12,RB1,GNAS,MEN1,SMAD3,SMAD4,TGFBR2,THBS1,MORF4L2,	2.67E-2
GO:0006355	regulation of transcription, DNA-dependent	MEF2D,MED13,E2F1,MED12,NOTCH2,MTF1,CHD4,SOX4,KAT2A,TCF3,ATXN7,HEXIM1,SOD2,HIF1A,RB1,ZIK1,MLL,ATRX,NPAS3,SMAD3,MEN1,NFAT5,ZNFX1,SMAD4,RBL1,MYC,MORF4L2,RUNX1,ILF3,ZNF689,PER1,NCOA3,LCOR,TAF9B,ERCC2,ELP2,VEGFA,BAZ2A,NPAT,ISL1,NPAS2,POGK,KAT2B,OLIG2,E2F3,APP,TBX1,TCEA2,ATF3,HDAC10,MNT,	2.67E-2
GO:0006915	apoptosis	MEF2D,RBM5,PTEN,E2F1,BCL2,SOD2,RTN3,PTENP1,PPP1R15A,TNFSF12,XIAP,MLL,RPS27A,APP,ERCC2,TP53INP1,ELMO2,TNFRSF10B,SMAD3,BCL2L11,DAPK3,MYC,THBS1,HTT,	2.69E-2
GO:0045792	negative regulation of cell size	DCBLD2,BCL2,PPP2R1A,SMAD3,TSC2,SMAD4,RB1,CDKN1A,	2.83E-2
GO:0007498	mesoderm development	BMPR2,TBX1,VEGFA,SMAD3,EPB41L5,GDF11,HTT,	2.84E-2
GO:0009991	response to extracellular stimulus	BMPR2,CCND1,PTEN,BCL2,SOD2,CPS1,PTENP1,RYR2,CDKN1A,SUOX,ASNS,GDAP1,TGFBR2,	3.33E-2
GO:0000079	regulation of cyclin-dependent protein kinase activity	CCND1,PTEN,HEXIM1,MEN1,PTENP1,CCND2,CDKN1A,	3.58E-2
GO:0034621	cellular macromolecular complex subunit organization	ABI2,RBM5,MTRF1L,WASL,NAP1L1,H3F3AP6,TUBB4B,HIST3H2A,HSP90AA1,HIST1H4C,HIST2H2AA3,SMAD3,HIST1H2AM,SMAD4,HIST2H4B,MBNL1,HIST2H3A,	3.59E-2
GO:0001666	response to hypoxia	MMP2,BCL2,SOD2,VEGFA,SMAD3,HIF1A,SMAD4,RYR2,THBS1,	4.15E-2
GO:0000082	G1/S transition of mitotic cell cycle	NPAT,CCND1,BCL2,CCND2,RB1,CDKN1A,	4.19E-2
GO:0006928	cell motion	ABI2,ATP5B,ISL1,PTEN,KIF5C,WASL,ARHGEF7,PTENP1,SELE,HIF1A,TNFSF12,RPS27A,APP,ICAM1,TUBB4B,TBX1,CAP1,MYCBP2,ARPC2,THBS1,	4.41E-2
GO:0018107	peptidyl-threonine phosphorylation	BCL2,PDPK1,TGFBR2,MAP3K12,	4.52E-2
GO:0045787	positive regulation of cell cycle	CCND1,RPS15A,TCF3,ASNS,CCND2,APP,	4.53E-2
GO:0045597	positive regulation of cell differentiation	MAPK9,BMPR2,RUNX1,BCL2,SMAD3,HIF1A,MEN1,SMAD4,TGFBR2,RB1,GNAS,MORF4L2,	4.53E-2
GO:0031667	response to nutrient levels	CCND1,BMPR2,PTEN,BCL2,SOD2,ASNS,CPS1,GDAP1,PTENP1,TGFBR2,RYR2,SUOX,	4.53E-2
GO:0006412	translation	MTRF1L,RPL21,EEF1A1,EIF4G3,RPL37,RPS27A,EIF4G2,MRPS6,RPS15A,PAIP1,ZNFX1,QARS,RPSA,RPL7,EARS2,	4.59E-2
GO:0009314	response to radiation	CCND1,ERCC2,BCL2,SOD2,COPS3,MEN1,CDKN1A,MYC,APP,OBFC2A,HTT,	5.04E-2
GO:0045926	negative regulation of growth	DCBLD2,BCL2,PPP2R1A,SMAD3,MEN1,SMAD4,RB1,CDKN1A,	5.08E-2
GO:0043085	positive regulation of catalytic activity	CCND1,BCL2,UBE2C,TSC2,HIF1A,SELE,MAP3K9,PDPK1,GNAS,RPS27A,GNB1,TNFRSF10B,CAP1,SMAD3,MEN1,CCND2,TGFBR2,IRAK1,THBS1,MYC,	5.18E-2
GO:0007389	pattern specification process	PKD2,BMPR2,RAB23,NOTCH2,MLL,GDF11,KAT2A,TBX1,VEGFA,RTTN,SMAD4,TGFBR2,HTT,	5.25E-2
GO:0006334	nucleosome assembly	HIST3H2A,NAP1L1,HIST2H2AA3,HIST1H4C,H3F3AP6,HIST1H2AM,HIST2H4B,HIST2H3A,	5.33E-2
GO:0030097	hemopoiesis	ERCC2,RUNX1,TCF3,BCL2,SOD2,VEGFA,NOTCH2,SOX4,MEN1,TGFBR2,RB1,MLL,	5.63E-2
GO:0022403	cell cycle phase	CCND1,NPAT,ILF3,E2F1,BCL2,UBE2C,SEPT2,WEE1,RB1,CDKN1A,PTTG1,APP,TCF3,MKI67,CETN2,FANCA,CCND2,	5.92E-2
GO:0006793	phosphorus metabolic process	ABI2,PTENP1,STK11,ND4,ND2,PPP2R1A,PTPRO,MOB1B,COX2,TGFBR2,IRAK1,MTMR3,BMPR2,CCND1,MAPK9,ATP5B,PTEN,BCL2,YES1,MAP3K9,PDPK1,WEE1,MAP3K8,JAK1,FER,MAP3K12,APP,ATP6,PIK3CA,PPP1CA,DAPK3,THBS1,	6.18E-2
GO:0006796	phosphate metabolic process	ABI2,PTENP1,STK11,ND4,ND2,PPP2R1A,PTPRO,MOB1B,COX2,TGFBR2,IRAK1,MTMR3,BMPR2,CCND1,MAPK9,ATP5B,PTEN,BCL2,YES1,MAP3K9,PDPK1,WEE1,MAP3K8,JAK1,FER,MAP3K12,APP,ATP6,PIK3CA,PPP1CA,DAPK3,THBS1,	6.18E-2
GO:0021510	spinal cord development	ERCC2,ISL1,RAB23,OLIG2,GDF11,	6.29E-2
GO:0006469	negative regulation of protein kinase activity	PPP2R1A,HEXIM1,MEN1,TSC2,PDPK1,RB1,CDKN1A,	6.32E-2
GO:0031497	chromatin assembly	HIST3H2A,NAP1L1,HIST2H2AA3,HIST1H4C,H3F3AP6,HIST1H2AM,HIST2H4B,HIST2H3A,	6.32E-2
GO:0015980	energy derivation by oxidation of organic compounds	ND4,ATP6,ND2,SDHA,SOD2,CPS1,PPP1CA,COX2,GNAS,	6.37E-2
GO:0001503	ossification	ERCC2,MEF2D,MMP2,BCL2,SMAD3,MEN1,IGFBP5,GNAS,	6.46E-2
GO:0030335	positive regulation of cell migration	BCL2,VEGFA,ARHGAP5,SMAD3,HIF1A,THBS1,ICAM1,	7.05E-2
GO:0001836	release of cytochrome c from mitochondria	BCL2,SOD2,SMAD3,MYC,	7.07E-2
GO:0018210	peptidyl-threonine modification	BCL2,PDPK1,TGFBR2,MAP3K12,	7.07E-2
GO:0006323	DNA packaging	HIST3H2A,ASH1L,NAP1L1,HIST2H2AA3,HIST1H4C,H3F3AP6,HIST1H2AM,HIST2H4B,HIST2H3A,	7.09E-2
GO:0022904	respiratory electron transport chain	ND4,ATP6,ND2,SDHA,SOD2,COX2,	7.41E-2
GO:0033673	negative regulation of kinase activity	PPP2R1A,HEXIM1,MEN1,TSC2,PDPK1,RB1,CDKN1A,	7.44E-2
GO:0001525	angiogenesis	ATP5B,PTEN,TBX1,VEGFA,HIF1A,PTENP1,TNFSF12,TGFBR2,GPI,THBS1,	7.48E-2
GO:0065004	protein-DNA complex assembly	HIST3H2A,NAP1L1,HIST2H2AA3,HIST1H4C,H3F3AP6,HIST1H2AM,HIST2H4B,HIST2H3A,	7.84E-2
GO:0006461	protein complex assembly	MED13,MED12,SOD2,WASL,TSC2,SEPT11,MLL,E2F3,DCTPP1,TAF9B,ERCC2,TUBB4B,HSP90AA1,PPP2R1A,SMAD3,FANCA,SMAD4,IRAK1,MYC,	8.21E-2
GO:0070271	protein complex biogenesis	MED13,MED12,SOD2,WASL,TSC2,SEPT11,MLL,E2F3,DCTPP1,TAF9B,ERCC2,TUBB4B,HSP90AA1,PPP2R1A,SMAD3,FANCA,SMAD4,IRAK1,MYC,	8.21E-2
GO:0030308	negative regulation of cell growth	DCBLD2,BCL2,PPP2R1A,SMAD3,SMAD4,RB1,CDKN1A,	8.26E-2
GO:0014070	response to organic cyclic substance	TAF9B,CCND1,PTEN,BCL2,PTENP1,CCND2,TGFBR2,CDKN1A,RYR2,	8.46E-2
GO:0042493	response to drug	CCND1,TXNIP,PTEN,BCL2,SOD2,CPS1,PTENP1,TGFBR2,GNAS,CDKN1A,RYR2,UQCRFS1,	8.51E-2
GO:0007242	intracellular signaling cascade	PKD2,MED13,MED12,RAB23,TSC2,SELE,NCOA3,DNAJC27,PPP2R1A,TNFRSF10B,RAB5B,HIST1H4C,HIST2H4B,IRAK1,CCND1,MAPK9,RND3,UBE2C,FBXO31,ARHGAP5,ARHGEF7,MAP3K9,PDPK1,IGFBP5,RB1,GNAS,JAK1,FER,MAP3K12,DNMBP,DCBLD2,PIK3CA,GNB1,PLEKHM1,MEN1,DAPK3,THBS1,DEPDC1,	8.67E-2
GO:0034728	nucleosome organization	HIST3H2A,NAP1L1,HIST2H2AA3,HIST1H4C,H3F3AP6,HIST1H2AM,HIST2H4B,HIST2H3A,	8.69E-2
GO:0045667	regulation of osteoblast differentiation	BMPR2,TOB1,SMAD3,MEN1,GNAS,	8.90E-2
GO:0051098	regulation of binding	ERCC2,BCL2,APEX1,SMAD3,MEN1,SMAD4,IRAK1,NCOA3,ICAM1,	9.06E-2
GO:0060348	bone development	ERCC2,MEF2D,MMP2,BCL2,SMAD3,MEN1,IGFBP5,GNAS,	9.22E-2
GO:0032026	response to magnesium ion	CCND1,RYR2,THBS1,	9.40E-2
GO:0055093	response to hyperoxia	ATP6,SOD2,CDKN1A,	9.40E-2
GO:0051348	negative regulation of transferase activity	PPP2R1A,HEXIM1,MEN1,TSC2,PDPK1,RB1,CDKN1A,	1.00E-1

KEGG pathways and Gene Ontology terms enriched for the interacted genes of ncRNA from RAID and miRTarBase.

disease name	related genes	p-value