The Detail Information for This Interaction


  • Detail
  • Binding
  • Network
Detail:
ncRNA Symmbol:miR-30a
ncRNA Category:miRNA
Interaction Gene Symbol: ATG5
Death Pathway:autophagy
Expression Direction of ncRNA:down
Species:Homo sapiens
Tissue:human chronic myeloid leukemia cells
PMID: 22902544
Detail Description:

ATG5-ATG12 forms a large multimeric complex with ATG16, which functions as the E3 ligase for LC3. Several miRNA regulators of this step have been identified including miR-30a, miR-181a and miR-374a (ATG5), miR-630 (ATG12), miR-376b (ATG4), miR-204 (LC3), miR-375 (ATG7), miR-519a (ATG10 and ATG16), miR-885-3p (ATG16) and miR-101 (ATG4 and RAB5A). 

Select the ncRNA symbol and transcript of gene
Mature of miR-30a    Transcript of ATG5    
Visualization:
Select the center nodes: First Node Second Node Both the Nodes
Select the Level of Neighbour: First Neighbour Second Neighbour

The 'First Node' or 'Second Node' option represents the sub-network of interacting entry with the first or second interaction node, the 'Both the Nodes' option represents the sub-network of interacting entry with both of interaction nodes.
The 'First Neighbour' represents the sub-network of direct interacting with the center node, the 'Second Neighbour' represents the sub-network of direct or second step interacting with the center node. Interaction sub-network based on the two nodes of this interaction may help the researchers represents all interacting partners immediately.


The Detail page: representing the detail information for RNA-RNA/RNA-Protein interaction;
The Binding page: representing the predicted binding sites and/or constants.
The Network page: representing the interaction sub-network of interacting RNA/Protein.