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Detail Information


Basic information:


Untranslated mRNA: Sponge mRNA

Related IDs cncRNA ID CNC_M_001841
Name SP1
Gene ID 6667
Location Coordinate(Strand) 12:53380176-53416446(+)
Locus Sequence
Organism Homo sapiens

Evidence support:

  
In vivo/vitro assay In vitro assay and in vivo assay (Mouse)
Low-throughput method Transfection assay;Western blotting;qRT-PCR;Luciferase assay;RNA in situ hybridization
High-throughput method /
Tissue/Cell Odontoblast
Description of experimental evidence The mRNA was detected by transfection assay, western blotting, qRT-PCR, luciferase assay and RNA in situ hybridization in odontoblast, which can act as a competitive endogenous RNA of Klf4 during odontoblast differentiation by binding miR-7a, miR-135a, miR-29b.

Orthologues:

  
Chimpanzee ENSPTRG00000005014  
Mouse ENSMUSG00000001280  
Drosophila FBgn0039169   FBgn0038418  
Zebrafish ENSDARG00000113284   ENSDARG00000088347  

References:

  
PMID 28238937
Description Sp1 is a competitive endogenous RNA of Klf4 during odontoblast differentiation.

Related Subcelluar Localization:

  
Subcelluar Localization RLID Link to RNALocate
chromatin RLID00099979 Link to RNALocate
cytosol RLID00099980 Link to RNALocate
cytosol RLID00099981 Link to RNALocate
insoluble cytoplasm RLID00099982 Link to RNALocate
nucleolus RLID00099983 Link to RNALocate
nucleoplasm RLID00099984 Link to RNALocate
nucleus RLID00099985 Link to RNALocate
exosome RLID00099986 Link to RNALocate
Nucleus RLID00019463 Link to RNALocate
Ribosome RLID00019464 Link to RNALocate
Cytosol RLID00019465 Link to RNALocate

Related Interactions:

  

  

   Notes: You can browse the related interactions in RNAinter by click the above link (since the interaction entries are too much to show here).