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Detail Information


Basic information:


Untranslated mRNA: Sponge mRNA

Related IDs cncRNA ID CNC_M_001973
Name HOXD1
Gene ID 3231
Location Coordinate(Strand) 2:176188668-176190907(+)
Locus Sequence
Organism Homo sapiens

Evidence support:

  
In vivo/vitro assay In vitro assay and in vivo assay (Mouse)
Low-throughput method Transfection assay;Western blotting;qRT-PCR;Luciferase assay;Wound healing assay;Adhesion assay;Live cell Imaging System;Immunofluorescence assay;In vivo metastasis and immunohistochemical assay
High-throughput method /
Tissue/Cell HEK293T cell;MCF-7 cell;MDA-MB-231 cell
Description of experimental evidence The mRNA was detected by transfection assay, western blotting, qRT-PCR and luciferase assay in MG63 cell and umbilical vein endothelial cell, which can inhibit EMT and metastasis of breast cancer by sponging miR-10b, miR-9 and miR-125b,acting as a decoy for STARD13-targeting microRNAs

Orthologues:

  
Chimpanzee ENSPTRG00000052716  
Mouse ENSMUSG00000042448  
Drosophila /
Zebrafish /

References:

  
PMID 26985770
Description Here, we identify CDH5, HOXD1, and HOXD10 as putative STARD13 ceRNAs and they display concordant patterns with STARD13 in different metastatic potential breast cancer cell lines and tissues.

Related Subcelluar Localization:

  
Subcelluar Localization RLID Link to RNALocate
exosome RLID00075832 Link to RNALocate

Related Interactions:

  

  

   Notes: You can browse the related interactions in RNAinter by click the above link (since the interaction entries are too much to show here).